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Posted to reviews@spark.apache.org by rerngvit <gi...@git.apache.org> on 2016/07/19 14:52:38 UTC
[GitHub] spark pull request #14264: [SPARK-11976][SPARKR] Support "." character in Da...
GitHub user rerngvit opened a pull request:
https://github.com/apache/spark/pull/14264
[SPARK-11976][SPARKR] Support "." character in DataFrame column name
## What changes were proposed in this pull request?
- Add support "." character in DataFrame column name
- Remove R code in "createDataFrame()" that replaces "." with "_"
- Remove warning suppression in createDataFrame() for iris dataset (introduced in SPARK-12034)
## How was this patch tested?
SparkR unit tests and manual testing with the R script described in SPARK-11976
You can merge this pull request into a Git repository by running:
$ git pull https://github.com/rerngvit/spark SPARK-11976
Alternatively you can review and apply these changes as the patch at:
https://github.com/apache/spark/pull/14264.patch
To close this pull request, make a commit to your master/trunk branch
with (at least) the following in the commit message:
This closes #14264
----
commit e1cf3d5994af65a009f9c4de5d001a2e5f8bbcfe
Author: Rerngvit Yanggratoke <re...@combient.com>
Date: 2016-07-19T14:48:15Z
[SPARK-11976][SPARKR] Support "." character in DataFrame column name
## What changes were proposed in this pull request?
- Add support "." character in DataFrame column name
- Remove R code in "createDataFrame()" that replaces "." with "_"
- Remove warning suppression in createDataFrame() for SPARK-12034
## How was this patch tested?
SparkR unit tests and manual testing with R script described in SPARK-11976
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[GitHub] spark pull request #14264: [SPARK-11976][SPARKR] Support "." character in Da...
Posted by rerngvit <gi...@git.apache.org>.
Github user rerngvit commented on a diff in the pull request:
https://github.com/apache/spark/pull/14264#discussion_r71624905
--- Diff: sql/catalyst/src/main/scala/org/apache/spark/sql/catalyst/plans/logical/LogicalPlan.scala ---
@@ -201,6 +201,8 @@ abstract class LogicalPlan extends QueryPlan[LogicalPlan] with Logging {
attribute: Attribute): Option[(Attribute, List[String])] = {
if (!attribute.isGenerated && resolver(attribute.name, nameParts.head)) {
Option((attribute.withName(nameParts.head), nameParts.tail.toList))
+ } else if (!attribute.isGenerated && resolver(attribute.name, nameParts.mkString("."))) {
+ Option((attribute.withName(nameParts.mkString(".")), Nil))
--- End diff --
@dongjoon-hyun I do not fully understand your question. Could you please elaborate a bit more? What do you mean by "okay for other Spark module"?
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[GitHub] spark issue #14264: [SPARK-11976][SPARKR] Support "." character in DataFrame...
Posted by rerngvit <gi...@git.apache.org>.
Github user rerngvit commented on the issue:
https://github.com/apache/spark/pull/14264
@felixcheung: in the recent patch, I removed checking for "." for function colnames() and its test code for the file you indicated.
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[GitHub] spark issue #14264: [SPARK-11976][SPARKR] Support "." character in DataFrame...
Posted by rerngvit <gi...@git.apache.org>.
Github user rerngvit commented on the issue:
https://github.com/apache/spark/pull/14264
Since SPARK-11977 didn't get merge and this PR is blocked on that. I decided to close this PR.
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[GitHub] spark issue #14264: [SPARK-11976][SPARKR] Support "." character in DataFrame...
Posted by AmplabJenkins <gi...@git.apache.org>.
Github user AmplabJenkins commented on the issue:
https://github.com/apache/spark/pull/14264
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[GitHub] spark issue #14264: [SPARK-11976][SPARKR] Support "." character in DataFrame...
Posted by AmplabJenkins <gi...@git.apache.org>.
Github user AmplabJenkins commented on the issue:
https://github.com/apache/spark/pull/14264
Can one of the admins verify this patch?
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[GitHub] spark issue #14264: [SPARK-11976][SPARKR] Support "." character in DataFrame...
Posted by AmplabJenkins <gi...@git.apache.org>.
Github user AmplabJenkins commented on the issue:
https://github.com/apache/spark/pull/14264
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[GitHub] spark issue #14264: [SPARK-11976][SPARKR] Support "." character in DataFrame...
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the issue:
https://github.com/apache/spark/pull/14264
**[Test build #62612 has finished](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/62612/consoleFull)** for PR 14264 at commit [`b9000c7`](https://github.com/apache/spark/commit/b9000c71be2b11e16d8749f750282ba8d4a8d248).
* This patch **fails R style tests**.
* This patch merges cleanly.
* This patch adds no public classes.
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[GitHub] spark issue #14264: [SPARK-11976][SPARKR] Support "." character in DataFrame...
Posted by shivaram <gi...@git.apache.org>.
Github user shivaram commented on the issue:
https://github.com/apache/spark/pull/14264
Jenkins, ok to test
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[GitHub] spark issue #14264: [SPARK-11976][SPARKR] Support "." character in DataFrame...
Posted by rerngvit <gi...@git.apache.org>.
Github user rerngvit commented on the issue:
https://github.com/apache/spark/pull/14264
@sun-rui Thanks. I understand now. I would submit a PR to SPARK-11977 first.
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[GitHub] spark issue #14264: [SPARK-11976][SPARKR] Support "." character in DataFrame...
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the issue:
https://github.com/apache/spark/pull/14264
**[Test build #62640 has started](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/62640/consoleFull)** for PR 14264 at commit [`60d0145`](https://github.com/apache/spark/commit/60d014501661d1c400675124c99ac7896a184250).
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[GitHub] spark issue #14264: [SPARK-11976][SPARKR] Support "." character in DataFrame...
Posted by AmplabJenkins <gi...@git.apache.org>.
Github user AmplabJenkins commented on the issue:
https://github.com/apache/spark/pull/14264
Merged build finished. Test FAILed.
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[GitHub] spark pull request #14264: [SPARK-11976][SPARKR] Support "." character in Da...
Posted by dongjoon-hyun <gi...@git.apache.org>.
Github user dongjoon-hyun commented on a diff in the pull request:
https://github.com/apache/spark/pull/14264#discussion_r71467294
--- Diff: sql/catalyst/src/main/scala/org/apache/spark/sql/catalyst/plans/logical/LogicalPlan.scala ---
@@ -201,6 +201,8 @@ abstract class LogicalPlan extends QueryPlan[LogicalPlan] with Logging {
attribute: Attribute): Option[(Attribute, List[String])] = {
if (!attribute.isGenerated && resolver(attribute.name, nameParts.head)) {
Option((attribute.withName(nameParts.head), nameParts.tail.toList))
+ } else if (!attribute.isGenerated && resolver(attribute.name, nameParts.mkString("."))) {
+ Option((attribute.withName(nameParts.mkString(".")), Nil))
--- End diff --
Hi, I'm just curious. Is it okay for other Spark module?
> Different from resolveAsTableColumn, this assumes `name` does NOT start with a qualifier.
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[GitHub] spark issue #14264: [SPARK-11976][SPARKR] Support "." character in DataFrame...
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the issue:
https://github.com/apache/spark/pull/14264
**[Test build #62550 has started](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/62550/consoleFull)** for PR 14264 at commit [`e1cf3d5`](https://github.com/apache/spark/commit/e1cf3d5994af65a009f9c4de5d001a2e5f8bbcfe).
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[GitHub] spark issue #14264: [SPARK-11976][SPARKR] Support "." character in DataFrame...
Posted by AmplabJenkins <gi...@git.apache.org>.
Github user AmplabJenkins commented on the issue:
https://github.com/apache/spark/pull/14264
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[GitHub] spark issue #14264: [SPARK-11976][SPARKR] Support "." character in DataFrame...
Posted by sun-rui <gi...@git.apache.org>.
Github user sun-rui commented on the issue:
https://github.com/apache/spark/pull/14264
@rerngvit, could you share the background that this PR can fix the issue. I see that https://issues.apache.org/jira/browse/SPARK-11976 is still open. Any other PR in Spark 2.0 make this possible?
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[GitHub] spark issue #14264: [SPARK-11976][SPARKR] Support "." character in DataFrame...
Posted by rerngvit <gi...@git.apache.org>.
Github user rerngvit commented on the issue:
https://github.com/apache/spark/pull/14264
@felixcheung
I removed prohibition for "." in the function "colnames()" for SparkR in the recent patch and also its test in the file you mentioned (test_sparkSQL.R L779). Feel free to have a look.
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[GitHub] spark issue #14264: [SPARK-11976][SPARKR] Support "." character in DataFrame...
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the issue:
https://github.com/apache/spark/pull/14264
**[Test build #62640 has finished](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/62640/consoleFull)** for PR 14264 at commit [`60d0145`](https://github.com/apache/spark/commit/60d014501661d1c400675124c99ac7896a184250).
* This patch **fails SparkR unit tests**.
* This patch merges cleanly.
* This patch adds no public classes.
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[GitHub] spark issue #14264: [SPARK-11976][SPARKR] Support "." character in DataFrame...
Posted by AmplabJenkins <gi...@git.apache.org>.
Github user AmplabJenkins commented on the issue:
https://github.com/apache/spark/pull/14264
Test FAILed.
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[GitHub] spark issue #14264: [SPARK-11976][SPARKR] Support "." character in DataFrame...
Posted by rerngvit <gi...@git.apache.org>.
Github user rerngvit commented on the issue:
https://github.com/apache/spark/pull/14264
@sun-rui
> could you share the background that this PR can fix the issue.
As stated in https://issues.apache.org/jira/browse/SPARK-11976, Spark core is already supporting column name ".". However, it does not work without the backticks (`). The missing part to make it work is a corresponding logic in the Analyzer layer.
> I see that https://issues.apache.org/jira/browse/SPARK-11976 is still open.
I do not fully understand your question. Could you please elaborate a bit more? **This PR** is actually SPARK-11976.
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[GitHub] spark issue #14264: [SPARK-11976][SPARKR] Support "." character in DataFrame...
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the issue:
https://github.com/apache/spark/pull/14264
**[Test build #62550 has finished](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/62550/consoleFull)** for PR 14264 at commit [`e1cf3d5`](https://github.com/apache/spark/commit/e1cf3d5994af65a009f9c4de5d001a2e5f8bbcfe).
* This patch **fails Spark unit tests**.
* This patch merges cleanly.
* This patch adds no public classes.
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[GitHub] spark issue #14264: [SPARK-11976][SPARKR] Support "." character in DataFrame...
Posted by felixcheung <gi...@git.apache.org>.
Github user felixcheung commented on the issue:
https://github.com/apache/spark/pull/14264
There's this (and I thought one more, if I recall):
https://github.com/apache/spark/blob/master/R/pkg/R/DataFrame.R#L349
And its tests in test_sparkSQL.R L779 - I'm surprised these tests pass?
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[GitHub] spark issue #14264: [SPARK-11976][SPARKR] Support "." character in DataFrame...
Posted by sun-rui <gi...@git.apache.org>.
Github user sun-rui commented on the issue:
https://github.com/apache/spark/pull/14264
@rerngvit, sorry, I mean https://issues.apache.org/jira/browse/SPARK-11977. If your PR can enable accesses to columns with "." in their names without backticks, please first submit a PR for SPARK-11977, as the change is for the Spark Core, not SparkR specific. After that PR gets merged, you can then submit a PR for SPARK-11976 which contains SparkR only changes.
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[GitHub] spark issue #14264: [SPARK-11976][SPARKR] Support "." character in DataFrame...
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the issue:
https://github.com/apache/spark/pull/14264
**[Test build #62612 has started](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/62612/consoleFull)** for PR 14264 at commit [`b9000c7`](https://github.com/apache/spark/commit/b9000c71be2b11e16d8749f750282ba8d4a8d248).
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[GitHub] spark pull request #14264: [SPARK-11976][SPARKR] Support "." character in Da...
Posted by rerngvit <gi...@git.apache.org>.
Github user rerngvit closed the pull request at:
https://github.com/apache/spark/pull/14264
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[GitHub] spark issue #14264: [SPARK-11976][SPARKR] Support "." character in DataFrame...
Posted by sun-rui <gi...@git.apache.org>.
Github user sun-rui commented on the issue:
https://github.com/apache/spark/pull/14264
@rerngvit, I modifed the title of SPARK-11977 to a narrow scope. You can go for it.
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[GitHub] spark issue #14264: [SPARK-11976][SPARKR] Support "." character in DataFrame...
Posted by rerngvit <gi...@git.apache.org>.
Github user rerngvit commented on the issue:
https://github.com/apache/spark/pull/14264
@sun-rui Please have a look.
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[GitHub] spark issue #14264: [SPARK-11976][SPARKR] Support "." character in DataFrame...
Posted by AmplabJenkins <gi...@git.apache.org>.
Github user AmplabJenkins commented on the issue:
https://github.com/apache/spark/pull/14264
Merged build finished. Test FAILed.
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