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Posted to issues@beam.apache.org by "Ankur Goenka (JIRA)" <ji...@apache.org> on 2019/05/01 20:33:00 UTC
[jira] [Resolved] (BEAM-6051) Tensor flow Chicago taxi failing for
256MB data failing with disk exhausted
[ https://issues.apache.org/jira/browse/BEAM-6051?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Ankur Goenka resolved BEAM-6051.
--------------------------------
Resolution: Cannot Reproduce
> Tensor flow Chicago taxi failing for 256MB data failing with disk exhausted
> ---------------------------------------------------------------------------
>
> Key: BEAM-6051
> URL: https://issues.apache.org/jira/browse/BEAM-6051
> Project: Beam
> Issue Type: Bug
> Components: java-fn-execution, runner-flink
> Reporter: Ankur Goenka
> Assignee: Ankur Goenka
> Priority: Major
> Fix For: Not applicable
>
>
> Chicago taxi example is failing when runningĀ on 1 node cluster with 256MB data.
> Disk usage:
> {code:java}
> goenka@goenka:/home/build$ ls -lha /tmp/flink-io-b9f13afc-0c5a-40ab-9a29-037d35068c1c/
> total 8.5G
> drwxr-xr-x 2 goenka primarygroup 4.0K Nov 12 20:27 .
> drwxrwxrwt 37 root root 11M Nov 12 20:27 ..
> -rw-r--r-- 1 goenka primarygroup 2.2G Nov 12 20:27 550b3393ce2a4c35ba37135c20ebccb3.channel
> -rw-r--r-- 1 goenka primarygroup 2.2G Nov 12 20:27 573f0fcb90732308857025108ffc74f6.channel
> -rw-r--r-- 1 goenka primarygroup 2.2G Nov 12 20:27 fb08a9ea467a1045f6087088b395ea8d.channel
> -rw-r--r-- 1 goenka primarygroup 2.2G Nov 12 20:27 fcca6cbf619f712d852d2371d9cb7046.channel
> {code}
> Error in logs:
> {code:java}
> 2018-11-12 20:45:09,344 ERROR org.apache.flink.runtime.operators.BatchTask - Error in task code: GroupReduce (GroupReduce at GenerateStatistics/RunStatsGenerators/CommonStatsGenerator/CombinePerKey/GroupByKey) (1/1) java.lang.Exception: The data preparation for task 'GroupReduce (GroupReduce at GenerateStatistics/RunStatsGenerators/CommonStatsGenerator/CombinePerKey/GroupByKey)' , caused an error: Error obtaining the sorted input: Thread 'SortMerger Reading Thread' terminated due to an exception: The record exceeds the maximum s ize of a sort buffer (current maximum: 30310400 bytes). at org.apache.flink.runtime.operators.BatchTask.run(BatchTask.java:479) at org.apache.flink.runtime.operators.BatchTask.invoke(BatchTask.java:368) at org.apache.flink.runtime.taskmanager.Task.run(Task.java:712) at java.lang.Thread.run(Thread.java:748) Caused by: java.lang.RuntimeException: Error obtaining the sorted input: Thread 'SortMerger Reading Thread' terminated due to an exception: The record exceeds the maximum size of a sort buffer (current maximum: 30310400 bytes). at org.apache.flink.runtime.operators.sort.UnilateralSortMerger.getIterator(UnilateralSortMerger.java:650) at org.apache.flink.runtime.operators.BatchTask.getInput(BatchTask.java:1108) at org.apache.flink.runtime.operators.GroupReduceDriver.prepare(GroupReduceDriver.java:99) at org.apache.flink.runtime.operators.BatchTask.run(BatchTask.java:473) ... 3 more Caused by: java.io.IOException: Thread 'SortMerger Reading Thread' terminated due to an exception: The record exceeds the maximum size of a sort buffer (current maximum: 30310400 bytes). at org.apache.flink.runtime.operators.sort.UnilateralSortMerger$ThreadBase.run(UnilateralSortMerger.java:831) Caused by: java.io.IOException: The record exceeds the maximum size of a sort buffer (current maximum: 30310400 bytes). at org.apache.flink.runtime.operators.sort.UnilateralSortMerger$ReadingThread.go(UnilateralSortMerger.java:986) at org.apache.flink.runtime.operators.sort.UnilateralSortMerger$ThreadBase.run(UnilateralSortMerger.java:827) 2018-11-12 20:45:09,348 INFO org.apache.flink.runtime.taskmanager.Task - GroupReduce (GroupReduce at GenerateStatistics/RunStatsGenerators/CommonStatsGenerator/CombinePerKey/GroupByKey) (1/1) (dcd3891fa9540bb4bf594a1a3d631e2e) switched from RUNNING to FAILED. java.lang.Exception: The data preparation for task 'GroupReduce (GroupReduce at GenerateStatistics/RunStatsGenerators/CommonStatsGenerator/CombinePerKey/GroupByKey)' , caused an error: Error obtaining the sorted input: Thread 'SortMerger Reading Thread' terminated due to an exception: The record exceeds the maximum s ize of a sort buffer (current maximum: 30310400 bytes). at org.apache.flink.runtime.operators.BatchTask.run(BatchTask.java:479) at org.apache.flink.runtime.operators.BatchTask.invoke(BatchTask.java:368) at org.apache.flink.runtime.taskmanager.Task.run(Task.java:712) at java.lang.Thread.run(Thread.java:748) Caused by: java.lang.RuntimeException: Error obtaining the sorted input: Thread 'SortMerger Reading Thread' terminated due to an exception: The record exceeds the maximum size of a sort buffer (current maximum: 30310400 bytes). at org.apache.flink.runtime.operators.sort.UnilateralSortMerger.getIterator(UnilateralSortMerger.java:650) at org.apache.flink.runtime.operators.BatchTask.getInput(BatchTask.java:1108) at org.apache.flink.runtime.operators.GroupReduceDriver.prepare(GroupReduceDriver.java:99) at org.apache.flink.runtime.operators.BatchTask.run(BatchTask.java:473) ... 3 more Caused by: java.io.IOException: Thread 'SortMerger Reading Thread' terminated due to an exception: The record exceeds the maximum size of a sort buffer (current maximum: 30310400 bytes). at org.apache.flink.runtime.operators.sort.UnilateralSortMerger$ThreadBase.run(UnilateralSortMerger.java:831) Caused by: java.io.IOException: The record exceeds the maximum size of a sort buffer (current maximum: 30310400 bytes). at org.apache.flink.runtime.operators.sort.UnilateralSortMerger$ReadingThread.go(UnilateralSortMerger.java:986) at org.apache.flink.runtime.operators.sort.UnilateralSortMerger$ThreadBase.run(UnilateralSortMerger.java:827) 2018-11-12 20:45:09,352 INFO org.apache.flink.runtime.taskmanager.Task - Freeing task resources for GroupReduce (GroupReduce at GenerateStatistics/RunStatsGenerators/CommonStatsGenerator/CombinePerKey/GroupByKey) (1/1) (dcd3891fa9540bb4bf594a1a3d631e2e). 2018-11-12 20:45:09,357 WARN bundle_processor.create_operation - No unique name set for transform fn/write/ref_PCollection_PCollection_77:0 2018-11-12 20:45:09,361 ERROR org.apache.flink.runtime.operators.BatchTask - Error in task code: GroupReduce (GroupReduce at GenerateStatistics/RunStatsGenerators/NumericStatsGenerator/CombinePerKey/GroupByKey) (1/1) java.lang.Exception: The data preparation for task 'GroupReduce (GroupReduce at GenerateStatistics/RunStatsGenerators/NumericStatsGenerator/CombinePerKey/GroupByKey)' , caused an error: Error obtaining the sorted input: Thread 'SortMerger Reading Thread' terminated due to an exception: The record exceeds the maximum size of a sort buffer (current maximum: 30310400 bytes). at org.apache.flink.runtime.operators.BatchTask.run(BatchTask.java:479) at org.apache.flink.runtime.operators.BatchTask.invoke(BatchTask.java:368) at org.apache.flink.runtime.taskmanager.Task.run(Task.java:712) at java.lang.Thread.run(Thread.java:748) Caused by: java.lang.RuntimeException: Error obtaining the sorted input: Thread 'SortMerger Reading Thread' terminated due to an exception: The record exceeds the maximum size of a sort buffer (current maximum: 30310400 bytes). at org.apache.flink.runtime.operators.sort.UnilateralSortMerger.getIterator(UnilateralSortMerger.java:650) at org.apache.flink.runtime.operators.BatchTask.getInput(BatchTask.java:1108) at org.apache.flink.runtime.operators.GroupReduceDriver.prepare(GroupReduceDriver.java:99) at org.apache.flink.runtime.operators.BatchTask.run(BatchTask.java:473) ... 3 more Caused by: java.io.IOException: Thread 'SortMerger Reading Thread' terminated due to an exception: The record exceeds the maximum size of a sort buffer (current maximum: 30310400 bytes). at org.apache.flink.runtime.operators.sort.UnilateralSortMerger$ThreadBase.run(UnilateralSortMerger.java:831) Caused by: java.io.IOException: The record exceeds the maximum size of a sort buffer (current maximum: 30310400 bytes). at org.apache.flink.runtime.operators.sort.UnilateralSortMerger$ReadingThread.go(UnilateralSortMerger.java:986) at org.apache.flink.runtime.operators.sort.UnilateralSortMerger$ThreadBase.run(UnilateralSortMerger.java:827) 2018-11-12 20:45:09,362 INFO org.apache.flink.runtime.taskmanager.Task - GroupReduce (GroupReduce at GenerateStatistics/RunStatsGenerators/NumericStatsGenerator/CombinePerKey/GroupByKey) (1/1) (51ce95407b2dd1e5b37501663e255dbd) switched from RUNNING to FAILED. java.lang.Exception: The data preparation for task 'GroupReduce (GroupReduce at GenerateStatistics/RunStatsGenerators/NumericStatsGenerator/CombinePerKey/GroupByKey)' , caused an error: Error obtaining the sorted input: Thread 'SortMerger Reading Thread' terminated due to an exception: The record exceeds the maximum size of a sort buffer (current maximum: 30310400 bytes). at org.apache.flink.runtime.operators.BatchTask.run(BatchTask.java:479) at org.apache.flink.runtime.operators.BatchTask.invoke(BatchTask.java:368) at org.apache.flink.runtime.taskmanager.Task.run(Task.java:712) at java.lang.Thread.run(Thread.java:748) Caused by: java.lang.RuntimeException: Error obtaining the sorted input: Thread 'SortMerger Reading Thread' terminated due to an exception: The record exceeds the maximum size of a sort buffer (current maximum: 30310400 bytes). at org.apache.flink.runtime.operators.sort.UnilateralSortMerger.getIterator(UnilateralSortMerger.java:650) at org.apache.flink.runtime.operators.BatchTask.getInput(BatchTask.java:1108) at org.apache.flink.runtime.operators.GroupReduceDriver.prepare(GroupReduceDriver.java:99) at org.apache.flink.runtime.operators.BatchTask.run(BatchTask.java:473) ... 3 more Caused by: java.io.IOException: Thread 'SortMerger Reading Thread' terminated due to an exception: The record exceeds the maximum size of a sort buffer (current maximum: 30310400 bytes). at org.apache.flink.runtime.operators.sort.UnilateralSortMerger$ThreadBase.run(UnilateralSortMerger.java:831) Caused by: java.io.IOException: The record exceeds the maximum size of a sort buffer (current maximum: 30310400 bytes). at org.apache.flink.runtime.operators.sort.UnilateralSortMerger$ReadingThread.go(UnilateralSortMerger.java:986) at org.apache.flink.runtime.operators.sort.UnilateralSortMerger$ThreadBase.run(UnilateralSortMerger.java:827) 2018-11-12 20:45:09,363 WARN bundle_processor.create_operation - No unique name set for transform fn/read/ref_PCollection_PCollection_74:0
> {code}
> Job Stats:
> {code:java}
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> "optimizer_properties": {
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> "local_properties": [
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> "estimates": [
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> "costs": [
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> "compiler_hints": [
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> "optimizer_properties": {
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> "compiler_hints": [
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> "inputs": [
> {
> "num": 0,
> "id": "766e63063a9b847725557fe8646ec382",
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> "exchange": "blocking"
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> ],
> "optimizer_properties": {
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> "value": "RANDOM_PARTITIONED"
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> {
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> "value": "not unique"
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> "local_properties": [
> {
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> ],
> "estimates": [
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> "value": "(unknown)"
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> {
> "name": "Est. Cardinality",
> "value": "(unknown)"
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> ],
> "costs": [
> {
> "name": "Network",
> "value": "0.0"
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> {
> "name": "Disk I/O",
> "value": "0.0"
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> {
> "name": "CPU",
> "value": "0.0"
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> {
> "name": "Cumulative Network",
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> {
> "name": "Cumulative Disk I/O",
> "value": "0.0"
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> {
> "name": "Cumulative CPU",
> "value": "0.0"
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> "compiler_hints": [
> {
> "name": "Output Size (bytes)",
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> {
> "name": "Filter Factor",
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> }
> ]
> }
> }
> ]
> }
> }
> {code}
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