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Posted to commits@airavata.apache.org by di...@apache.org on 2018/07/31 14:05:55 UTC

[airavata] branch develop updated (2d39bb1 -> dd81c47)

This is an automated email from the ASF dual-hosted git repository.

dimuthuupe pushed a change to branch develop
in repository https://gitbox.apache.org/repos/asf/airavata.git.


    from 2d39bb1  PGA deployment for beta simvascular
     add 239f69f  Adding Airavata thrift workflow catalog models and java compiled classes
     add 2856119  Adding Airavata API methods and JPA entities related to workflow
     add b42aa8a  Modifying database models thrift models and workflow repository methods
     add b740172  Modifying workflow models and Adding tests for workflow submission
     add 723cf79  Updating logs to include required information
     add b220c36  Merge branch 'develop' of https://github.com/apache/airavata into develop
     new dd81c47  Merge pull request #203 from yasgun/develop

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Summary of changes:
 .../api/server/handler/AiravataServerHandler.java  |   26 +-
 .../java/org/apache/airavata/api/Airavata.java     |  694 +++----
 .../airavata/model/workflow/AiravataWorkflow.java  | 2144 ++++++++++++++++++++
 .../airavata/model/workflow/ApplicationConfig.java |  885 ++++++++
 .../airavata/model/workflow/ApplicationState.java  |   83 +
 .../airavata/model/workflow/ApplicationStatus.java |  708 +++++++
 .../airavata/model/workflow/HandlerState.java      |   83 +
 .../airavata/model/workflow/HandlerStatus.java     |  708 +++++++
 .../airavata/model/workflow/HandlerType.java       |   68 +
 .../airavata/model/workflow/NotificationEmail.java |  380 ++++
 .../model/workflow/WorkflowApplication.java        | 1701 ++++++++++++++++
 .../model/workflow/WorkflowConnection.java         | 1303 ++++++++++++
 .../airavata/model/workflow/WorkflowHandler.java   | 1901 +++++++++++++++++
 .../airavata/model/workflow/WorkflowState.java     |   92 +
 .../airavata/model/workflow/WorkflowStatus.java    |  708 +++++++
 .../model/workflow/core/ComponentType.java         |   62 +
 .../airavata/model/workflow/core/DataBlock.java    |  806 ++++++++
 .../AiravataWorkflowEntity.java                    |  200 ++
 .../AiravataWorkflowErrorEntity.java               |  129 ++
 .../AiravataWorkflowErrorPK.java                   |   65 +
 .../AiravataWorkflowStatusEntity.java              |  106 +
 .../AiravataWorkflowStatusPK.java                  |   65 +
 .../ApplicationErrorEntity.java                    |  129 ++
 .../ApplicationErrorPK.java                        |   65 +
 .../ApplicationStatusEntity.java                   |  106 +
 .../ApplicationStatusPK.java                       |   65 +
 .../HandlerErrorEntity.java                        |  129 ++
 .../airavataworkflowcatalog/HandlerErrorPK.java    |   65 +
 .../HandlerInputEntity.java                        |  206 ++
 .../airavataworkflowcatalog/HandlerInputPK.java    |   65 +
 .../HandlerOutputEntity.java                       |  184 ++
 .../airavataworkflowcatalog/HandlerOutputPK.java   |   65 +
 .../HandlerStatusEntity.java                       |  103 +
 .../airavataworkflowcatalog/HandlerStatusPK.java   |   65 +
 .../NotificationEmailEntity.java                   |   69 +
 .../NotificationEmailPK.java                       |   65 +
 .../WorkflowApplicationEntity.java                 |  203 ++
 .../WorkflowApplicationPK.java                     |   65 +
 .../WorkflowConnectionEntity.java                  |  196 ++
 .../WorkflowConnectionPK.java                      |   65 +
 .../WorkflowDataBlockEntity.java                   |  124 ++
 .../WorkflowHandlerEntity.java                     |  162 ++
 .../airavataworkflowcatalog/WorkflowHandlerPK.java |   65 +
 .../workflowcatalog/WorkflowRepository.java        |  182 +-
 .../airavata/registry/core/utils/DBConstants.java  |    2 +-
 .../utils/JPAUtil/WorkflowCatalogJPAUtils.java     |    2 +-
 .../registry/core/utils/QueryConstants.java        |    8 +-
 .../src/main/resources/META-INF/persistence.xml    |   25 +-
 .../resources/airavataworkflowcatalog-derby.sql    |  180 ++
 .../workflowcatalog/WorkflowRepositoryTest.java    |  212 +-
 .../workflowcatalog/util/Initialize.java           |    2 +-
 .../resources/airavataworkflowcatalog-derby.sql    |  180 ++
 .../workflow/catalog/impl/WorkflowCatalogImpl.java |  352 ++--
 .../airavata/registry/cpi/WorkflowCatalog.java     |   18 +-
 .../api/service/handler/RegistryServerHandler.java |   26 +-
 .../airavata/registry/api/RegistryService.java     |  686 +++----
 .../airavata-apis/airavata_api.thrift              |   14 +-
 .../component-cpis/registry-api.thrift             |   14 +-
 .../airavata_workflow_model.thrift                 |   73 +
 .../core-models/component_type.thrift              |   29 +
 .../core-models/data_block_model.thrift            |   34 +
 .../workflow_application_model.thrift              |   61 +
 .../workflow_connection_model.thrift               |   41 +
 .../workflow_handler_model.thrift                  |   70 +
 .../generate-thrift-stubs.sh                       |    3 +
 65 files changed, 16336 insertions(+), 1056 deletions(-)
 create mode 100644 airavata-api/airavata-data-models/src/main/java/org/apache/airavata/model/workflow/AiravataWorkflow.java
 create mode 100644 airavata-api/airavata-data-models/src/main/java/org/apache/airavata/model/workflow/ApplicationConfig.java
 create mode 100644 airavata-api/airavata-data-models/src/main/java/org/apache/airavata/model/workflow/ApplicationState.java
 create mode 100644 airavata-api/airavata-data-models/src/main/java/org/apache/airavata/model/workflow/ApplicationStatus.java
 create mode 100644 airavata-api/airavata-data-models/src/main/java/org/apache/airavata/model/workflow/HandlerState.java
 create mode 100644 airavata-api/airavata-data-models/src/main/java/org/apache/airavata/model/workflow/HandlerStatus.java
 create mode 100644 airavata-api/airavata-data-models/src/main/java/org/apache/airavata/model/workflow/HandlerType.java
 create mode 100644 airavata-api/airavata-data-models/src/main/java/org/apache/airavata/model/workflow/NotificationEmail.java
 create mode 100644 airavata-api/airavata-data-models/src/main/java/org/apache/airavata/model/workflow/WorkflowApplication.java
 create mode 100644 airavata-api/airavata-data-models/src/main/java/org/apache/airavata/model/workflow/WorkflowConnection.java
 create mode 100644 airavata-api/airavata-data-models/src/main/java/org/apache/airavata/model/workflow/WorkflowHandler.java
 create mode 100644 airavata-api/airavata-data-models/src/main/java/org/apache/airavata/model/workflow/WorkflowState.java
 create mode 100644 airavata-api/airavata-data-models/src/main/java/org/apache/airavata/model/workflow/WorkflowStatus.java
 create mode 100644 airavata-api/airavata-data-models/src/main/java/org/apache/airavata/model/workflow/core/ComponentType.java
 create mode 100644 airavata-api/airavata-data-models/src/main/java/org/apache/airavata/model/workflow/core/DataBlock.java
 create mode 100644 modules/registry-refactoring/src/main/java/org/apache/airavata/registry/core/entities/airavataworkflowcatalog/AiravataWorkflowEntity.java
 create mode 100644 modules/registry-refactoring/src/main/java/org/apache/airavata/registry/core/entities/airavataworkflowcatalog/AiravataWorkflowErrorEntity.java
 create mode 100644 modules/registry-refactoring/src/main/java/org/apache/airavata/registry/core/entities/airavataworkflowcatalog/AiravataWorkflowErrorPK.java
 create mode 100644 modules/registry-refactoring/src/main/java/org/apache/airavata/registry/core/entities/airavataworkflowcatalog/AiravataWorkflowStatusEntity.java
 create mode 100644 modules/registry-refactoring/src/main/java/org/apache/airavata/registry/core/entities/airavataworkflowcatalog/AiravataWorkflowStatusPK.java
 create mode 100644 modules/registry-refactoring/src/main/java/org/apache/airavata/registry/core/entities/airavataworkflowcatalog/ApplicationErrorEntity.java
 create mode 100644 modules/registry-refactoring/src/main/java/org/apache/airavata/registry/core/entities/airavataworkflowcatalog/ApplicationErrorPK.java
 create mode 100644 modules/registry-refactoring/src/main/java/org/apache/airavata/registry/core/entities/airavataworkflowcatalog/ApplicationStatusEntity.java
 create mode 100644 modules/registry-refactoring/src/main/java/org/apache/airavata/registry/core/entities/airavataworkflowcatalog/ApplicationStatusPK.java
 create mode 100644 modules/registry-refactoring/src/main/java/org/apache/airavata/registry/core/entities/airavataworkflowcatalog/HandlerErrorEntity.java
 create mode 100644 modules/registry-refactoring/src/main/java/org/apache/airavata/registry/core/entities/airavataworkflowcatalog/HandlerErrorPK.java
 create mode 100644 modules/registry-refactoring/src/main/java/org/apache/airavata/registry/core/entities/airavataworkflowcatalog/HandlerInputEntity.java
 create mode 100644 modules/registry-refactoring/src/main/java/org/apache/airavata/registry/core/entities/airavataworkflowcatalog/HandlerInputPK.java
 create mode 100644 modules/registry-refactoring/src/main/java/org/apache/airavata/registry/core/entities/airavataworkflowcatalog/HandlerOutputEntity.java
 create mode 100644 modules/registry-refactoring/src/main/java/org/apache/airavata/registry/core/entities/airavataworkflowcatalog/HandlerOutputPK.java
 create mode 100644 modules/registry-refactoring/src/main/java/org/apache/airavata/registry/core/entities/airavataworkflowcatalog/HandlerStatusEntity.java
 create mode 100644 modules/registry-refactoring/src/main/java/org/apache/airavata/registry/core/entities/airavataworkflowcatalog/HandlerStatusPK.java
 create mode 100644 modules/registry-refactoring/src/main/java/org/apache/airavata/registry/core/entities/airavataworkflowcatalog/NotificationEmailEntity.java
 create mode 100644 modules/registry-refactoring/src/main/java/org/apache/airavata/registry/core/entities/airavataworkflowcatalog/NotificationEmailPK.java
 create mode 100644 modules/registry-refactoring/src/main/java/org/apache/airavata/registry/core/entities/airavataworkflowcatalog/WorkflowApplicationEntity.java
 create mode 100644 modules/registry-refactoring/src/main/java/org/apache/airavata/registry/core/entities/airavataworkflowcatalog/WorkflowApplicationPK.java
 create mode 100644 modules/registry-refactoring/src/main/java/org/apache/airavata/registry/core/entities/airavataworkflowcatalog/WorkflowConnectionEntity.java
 create mode 100644 modules/registry-refactoring/src/main/java/org/apache/airavata/registry/core/entities/airavataworkflowcatalog/WorkflowConnectionPK.java
 create mode 100644 modules/registry-refactoring/src/main/java/org/apache/airavata/registry/core/entities/airavataworkflowcatalog/WorkflowDataBlockEntity.java
 create mode 100644 modules/registry-refactoring/src/main/java/org/apache/airavata/registry/core/entities/airavataworkflowcatalog/WorkflowHandlerEntity.java
 create mode 100644 modules/registry-refactoring/src/main/java/org/apache/airavata/registry/core/entities/airavataworkflowcatalog/WorkflowHandlerPK.java
 create mode 100644 modules/registry-refactoring/src/main/resources/airavataworkflowcatalog-derby.sql
 create mode 100644 modules/registry-refactoring/src/test/resources/airavataworkflowcatalog-derby.sql
 create mode 100644 thrift-interface-descriptions/data-models/workflow-catalog-models/airavata_workflow_model.thrift
 create mode 100644 thrift-interface-descriptions/data-models/workflow-catalog-models/core-models/component_type.thrift
 create mode 100644 thrift-interface-descriptions/data-models/workflow-catalog-models/core-models/data_block_model.thrift
 create mode 100644 thrift-interface-descriptions/data-models/workflow-catalog-models/workflow_application_model.thrift
 create mode 100644 thrift-interface-descriptions/data-models/workflow-catalog-models/workflow_connection_model.thrift
 create mode 100644 thrift-interface-descriptions/data-models/workflow-catalog-models/workflow_handler_model.thrift


[airavata] 01/01: Merge pull request #203 from yasgun/develop

Posted by di...@apache.org.
This is an automated email from the ASF dual-hosted git repository.

dimuthuupe pushed a commit to branch develop
in repository https://gitbox.apache.org/repos/asf/airavata.git

commit dd81c47cc9eda3454a95272555867e8076973489
Merge: 2d39bb1 b220c36
Author: Dimuthu <di...@gmail.com>
AuthorDate: Tue Jul 31 10:05:52 2018 -0400

    Merge pull request #203 from yasgun/develop
    
    Adding Workflow Related Thrift Models and Database Models

 .../api/server/handler/AiravataServerHandler.java  |   26 +-
 .../java/org/apache/airavata/api/Airavata.java     |  694 +++----
 .../airavata/model/workflow/AiravataWorkflow.java  | 2144 ++++++++++++++++++++
 .../airavata/model/workflow/ApplicationConfig.java |  885 ++++++++
 .../airavata/model/workflow/ApplicationState.java  |   83 +
 .../airavata/model/workflow/ApplicationStatus.java |  708 +++++++
 .../airavata/model/workflow/HandlerState.java      |   83 +
 .../airavata/model/workflow/HandlerStatus.java     |  708 +++++++
 .../airavata/model/workflow/HandlerType.java       |   68 +
 .../airavata/model/workflow/NotificationEmail.java |  380 ++++
 .../model/workflow/WorkflowApplication.java        | 1701 ++++++++++++++++
 .../model/workflow/WorkflowConnection.java         | 1303 ++++++++++++
 .../airavata/model/workflow/WorkflowHandler.java   | 1901 +++++++++++++++++
 .../airavata/model/workflow/WorkflowState.java     |   92 +
 .../airavata/model/workflow/WorkflowStatus.java    |  708 +++++++
 .../model/workflow/core/ComponentType.java         |   62 +
 .../airavata/model/workflow/core/DataBlock.java    |  806 ++++++++
 .../AiravataWorkflowEntity.java                    |  200 ++
 .../AiravataWorkflowErrorEntity.java               |  129 ++
 .../AiravataWorkflowErrorPK.java                   |   65 +
 .../AiravataWorkflowStatusEntity.java              |  106 +
 .../AiravataWorkflowStatusPK.java                  |   65 +
 .../ApplicationErrorEntity.java                    |  129 ++
 .../ApplicationErrorPK.java                        |   65 +
 .../ApplicationStatusEntity.java                   |  106 +
 .../ApplicationStatusPK.java                       |   65 +
 .../HandlerErrorEntity.java                        |  129 ++
 .../airavataworkflowcatalog/HandlerErrorPK.java    |   65 +
 .../HandlerInputEntity.java                        |  206 ++
 .../airavataworkflowcatalog/HandlerInputPK.java    |   65 +
 .../HandlerOutputEntity.java                       |  184 ++
 .../airavataworkflowcatalog/HandlerOutputPK.java   |   65 +
 .../HandlerStatusEntity.java                       |  103 +
 .../airavataworkflowcatalog/HandlerStatusPK.java   |   65 +
 .../NotificationEmailEntity.java                   |   69 +
 .../NotificationEmailPK.java                       |   65 +
 .../WorkflowApplicationEntity.java                 |  203 ++
 .../WorkflowApplicationPK.java                     |   65 +
 .../WorkflowConnectionEntity.java                  |  196 ++
 .../WorkflowConnectionPK.java                      |   65 +
 .../WorkflowDataBlockEntity.java                   |  124 ++
 .../WorkflowHandlerEntity.java                     |  162 ++
 .../airavataworkflowcatalog/WorkflowHandlerPK.java |   65 +
 .../workflowcatalog/WorkflowRepository.java        |  182 +-
 .../airavata/registry/core/utils/DBConstants.java  |    2 +-
 .../utils/JPAUtil/WorkflowCatalogJPAUtils.java     |    2 +-
 .../registry/core/utils/QueryConstants.java        |    8 +-
 .../src/main/resources/META-INF/persistence.xml    |   25 +-
 .../resources/airavataworkflowcatalog-derby.sql    |  180 ++
 .../workflowcatalog/WorkflowRepositoryTest.java    |  212 +-
 .../workflowcatalog/util/Initialize.java           |    2 +-
 .../resources/airavataworkflowcatalog-derby.sql    |  180 ++
 .../workflow/catalog/impl/WorkflowCatalogImpl.java |  352 ++--
 .../airavata/registry/cpi/WorkflowCatalog.java     |   18 +-
 .../api/service/handler/RegistryServerHandler.java |   26 +-
 .../airavata/registry/api/RegistryService.java     |  686 +++----
 .../airavata-apis/airavata_api.thrift              |   14 +-
 .../component-cpis/registry-api.thrift             |   14 +-
 .../airavata_workflow_model.thrift                 |   73 +
 .../core-models/component_type.thrift              |   29 +
 .../core-models/data_block_model.thrift            |   34 +
 .../workflow_application_model.thrift              |   61 +
 .../workflow_connection_model.thrift               |   41 +
 .../workflow_handler_model.thrift                  |   70 +
 .../generate-thrift-stubs.sh                       |    3 +
 65 files changed, 16336 insertions(+), 1056 deletions(-)