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Posted to commits@griffin.apache.org by gu...@apache.org on 2018/02/09 03:59:19 UTC
incubator-griffin git commit: fix bug of data source cache,
and enhance distinctness
Repository: incubator-griffin
Updated Branches:
refs/heads/master 399d923e9 -> 7026ab541
fix bug of data source cache, and enhance distinctness
Author: Lionel Liu <bh...@163.com>
Closes #219 from bhlx3lyx7/tmst.
Project: http://git-wip-us.apache.org/repos/asf/incubator-griffin/repo
Commit: http://git-wip-us.apache.org/repos/asf/incubator-griffin/commit/7026ab54
Tree: http://git-wip-us.apache.org/repos/asf/incubator-griffin/tree/7026ab54
Diff: http://git-wip-us.apache.org/repos/asf/incubator-griffin/diff/7026ab54
Branch: refs/heads/master
Commit: 7026ab541cf00f32b05ec6812aa884d04a1aca20
Parents: 399d923
Author: Lionel Liu <bh...@163.com>
Authored: Fri Feb 9 11:59:13 2018 +0800
Committer: Lionel Liu <bh...@163.com>
Committed: Fri Feb 9 11:59:13 2018 +0800
----------------------------------------------------------------------
griffin-doc/docker/griffin-docker-guide.md | 4 +-
.../docker/svc_msr/docker-compose-batch.yml | 2 +-
.../docker/svc_msr/docker-compose-streaming.yml | 2 +-
.../data/source/cache/DataSourceCache.scala | 47 +++++++++++++-------
.../rule/trans/DistinctnessRulePlanTrans.scala | 15 ++++++-
.../resources/_profiling-batch-griffindsl.json | 4 +-
.../measure/rule/udf/GriffinUdfsTest.scala | 10 +++--
7 files changed, 56 insertions(+), 28 deletions(-)
----------------------------------------------------------------------
http://git-wip-us.apache.org/repos/asf/incubator-griffin/blob/7026ab54/griffin-doc/docker/griffin-docker-guide.md
----------------------------------------------------------------------
diff --git a/griffin-doc/docker/griffin-docker-guide.md b/griffin-doc/docker/griffin-docker-guide.md
index 2336743..bc36759 100644
--- a/griffin-doc/docker/griffin-docker-guide.md
+++ b/griffin-doc/docker/griffin-docker-guide.md
@@ -30,14 +30,14 @@ Griffin docker images are pre-built on docker hub, users can pull them to try gr
```
3. Pull griffin pre-built docker images.
```
- docker pull bhlx3lyx7/svc_msr:0.1.6
+ docker pull bhlx3lyx7/svc_msr:0.2.0
docker pull bhlx3lyx7/elasticsearch
docker pull bhlx3lyx7/kafka
docker pull zookeeper:3.5
```
Or you can pull the images faster through mirror acceleration if you are in China.
```
- docker pull registry.docker-cn.com/bhlx3lyx7/svc_msr:0.1.6
+ docker pull registry.docker-cn.com/bhlx3lyx7/svc_msr:0.2.0
docker pull registry.docker-cn.com/bhlx3lyx7/elasticsearch
docker pull registry.docker-cn.com/bhlx3lyx7/kafka
docker pull registry.docker-cn.com/zookeeper:3.5
http://git-wip-us.apache.org/repos/asf/incubator-griffin/blob/7026ab54/griffin-doc/docker/svc_msr/docker-compose-batch.yml
----------------------------------------------------------------------
diff --git a/griffin-doc/docker/svc_msr/docker-compose-batch.yml b/griffin-doc/docker/svc_msr/docker-compose-batch.yml
index f542247..fb14072 100644
--- a/griffin-doc/docker/svc_msr/docker-compose-batch.yml
+++ b/griffin-doc/docker/svc_msr/docker-compose-batch.yml
@@ -16,7 +16,7 @@
#under the License.
griffin:
- image: bhlx3lyx7/svc_msr:0.1.6
+ image: bhlx3lyx7/svc_msr:0.2.0
hostname: griffin
links:
- es
http://git-wip-us.apache.org/repos/asf/incubator-griffin/blob/7026ab54/griffin-doc/docker/svc_msr/docker-compose-streaming.yml
----------------------------------------------------------------------
diff --git a/griffin-doc/docker/svc_msr/docker-compose-streaming.yml b/griffin-doc/docker/svc_msr/docker-compose-streaming.yml
index 8c22b64..22110ee 100644
--- a/griffin-doc/docker/svc_msr/docker-compose-streaming.yml
+++ b/griffin-doc/docker/svc_msr/docker-compose-streaming.yml
@@ -16,7 +16,7 @@
#under the License.
griffin:
- image: bhlx3lyx7/svc_msr:0.1.6
+ image: bhlx3lyx7/svc_msr:0.2.0
hostname: griffin
links:
- es
http://git-wip-us.apache.org/repos/asf/incubator-griffin/blob/7026ab54/measure/src/main/scala/org/apache/griffin/measure/data/source/cache/DataSourceCache.scala
----------------------------------------------------------------------
diff --git a/measure/src/main/scala/org/apache/griffin/measure/data/source/cache/DataSourceCache.scala b/measure/src/main/scala/org/apache/griffin/measure/data/source/cache/DataSourceCache.scala
index d61f294..ac67557 100644
--- a/measure/src/main/scala/org/apache/griffin/measure/data/source/cache/DataSourceCache.scala
+++ b/measure/src/main/scala/org/apache/griffin/measure/data/source/cache/DataSourceCache.scala
@@ -159,8 +159,7 @@ trait DataSourceCache extends DataCacheable with Loggable with Serializable {
val oldDfPath = s"${oldFilePath}/${idx}"
try {
val dfr = sqlContext.read
-// Some(readDataFrame(dfr, oldDfPath).filter(filterStr))
- Some(readDataFrame(dfr, oldDfPath)) // not need to filter, has filtered in update phase
+ Some(readDataFrame(dfr, oldDfPath).filter(filterStr))
} catch {
case e: Throwable => {
warn(s"read old data source cache warn: ${e.getMessage}")
@@ -190,15 +189,19 @@ trait DataSourceCache extends DataCacheable with Loggable with Serializable {
}
}
- private def cleanOutTimePartitions(path: String, outTime: Long, partitionOpt: Option[String]): Unit = {
- val earlierOrEqPaths = listEarlierOrEqPartitions(path: String, outTime, partitionOpt)
+ private def cleanOutTimePartitions(path: String, outTime: Long, partitionOpt: Option[String],
+ func: (Long, Long) => Boolean
+ ): Unit = {
+ val earlierOrEqPaths = listPartitionsByFunc(path: String, outTime, partitionOpt, func)
// delete out time data path
earlierOrEqPaths.foreach { path =>
println(s"delete hdfs path: ${path}")
HdfsUtil.deleteHdfsPath(path)
}
}
- private def listEarlierOrEqPartitions(path: String, bound: Long, partitionOpt: Option[String]): Iterable[String] = {
+ private def listPartitionsByFunc(path: String, bound: Long, partitionOpt: Option[String],
+ func: (Long, Long) => Boolean
+ ): Iterable[String] = {
val names = HdfsUtil.listSubPathsByType(path, "dir")
val regex = partitionOpt match {
case Some(partition) => s"^${partition}=(\\d+)$$".r
@@ -208,7 +211,7 @@ trait DataSourceCache extends DataCacheable with Loggable with Serializable {
name match {
case regex(value) => {
str2Long(value) match {
- case Some(t) => (t <= bound)
+ case Some(t) => func(t, bound)
case _ => false
}
}
@@ -239,7 +242,8 @@ trait DataSourceCache extends DataCacheable with Loggable with Serializable {
val newCacheLocked = newCacheLock.lock(-1, TimeUnit.SECONDS)
if (newCacheLocked) {
try {
- cleanOutTimePartitions(newFilePath, nct, Some(InternalColumns.tmst))
+ cleanOutTimePartitions(newFilePath, nct, Some(InternalColumns.tmst),
+ (a: Long, b: Long) => (a <= b))
} catch {
case e: Throwable => error(s"clean new cache data error: ${e.getMessage}")
} finally {
@@ -263,7 +267,7 @@ trait DataSourceCache extends DataCacheable with Loggable with Serializable {
if (oldCacheLocked) {
try {
// clean calculated old cache data
- cleanOutTimePartitions(oldFilePath, idx, None)
+ cleanOutTimePartitions(oldFilePath, idx, None, (a: Long, b: Long) => (a < b))
// clean out time old cache data not calculated
// cleanOutTimePartitions(oldDfPath, oct, Some(InternalColumns.tmst))
} catch {
@@ -294,15 +298,17 @@ trait DataSourceCache extends DataCacheable with Loggable with Serializable {
val nextOldCacheIndex = oldCacheIndexOpt.getOrElse(defOldCacheIndex) + 1
val oldDfPath = s"${oldFilePath}/${nextOldCacheIndex}"
-// val dfw = df.write.mode(SaveMode.Overwrite).partitionBy(InternalColumns.tmst)
- val cleanTime = readCleanTime
- val updateDf = cleanTime match {
- case Some(ct) => {
- val filterStr = s"`${InternalColumns.tmst}` > ${ct}"
- df.filter(filterStr)
- }
- case _ => df
- }
+// val cleanTime = readCleanTime
+// val updateDf = cleanTime match {
+// case Some(ct) => {
+// val filterStr = s"`${InternalColumns.tmst}` > ${ct}"
+// df.filter(filterStr)
+// }
+// case _ => df
+// }
+ val cleanTime = getNextCleanTime
+ val filterStr = s"`${InternalColumns.tmst}` > ${cleanTime}"
+ val updateDf = df.filter(filterStr)
val prlCount = sqlContext.sparkContext.defaultParallelism
// coalesce
@@ -341,4 +347,11 @@ trait DataSourceCache extends DataCacheable with Loggable with Serializable {
submitCleanTime(nextCleanTime)
}
+ // read next clean time
+ private def getNextCleanTime(): Long = {
+ val timeRange = TimeInfoCache.getTimeRange
+ val nextCleanTime = timeRange._2 + deltaTimeRange._1
+ nextCleanTime
+ }
+
}
http://git-wip-us.apache.org/repos/asf/incubator-griffin/blob/7026ab54/measure/src/main/scala/org/apache/griffin/measure/rule/trans/DistinctnessRulePlanTrans.scala
----------------------------------------------------------------------
diff --git a/measure/src/main/scala/org/apache/griffin/measure/rule/trans/DistinctnessRulePlanTrans.scala b/measure/src/main/scala/org/apache/griffin/measure/rule/trans/DistinctnessRulePlanTrans.scala
index 5e3819c..7820d0c 100644
--- a/measure/src/main/scala/org/apache/griffin/measure/rule/trans/DistinctnessRulePlanTrans.scala
+++ b/measure/src/main/scala/org/apache/griffin/measure/rule/trans/DistinctnessRulePlanTrans.scala
@@ -27,6 +27,7 @@ import org.apache.griffin.measure.rule.dsl.analyzer.DistinctnessAnalyzer
import org.apache.griffin.measure.rule.dsl.expr._
import org.apache.griffin.measure.rule.plan._
import org.apache.griffin.measure.rule.trans.RuleExportFactory._
+import org.apache.griffin.measure.rule.trans.DsUpdateFactory._
import org.apache.griffin.measure.utils.ParamUtil._
import scala.util.Try
@@ -125,6 +126,14 @@ case class DistinctnessRulePlanTrans(dataSourceNames: Seq[String],
val (distRulePlan, dupCountTableName) = procType match {
case StreamingProcessType if (withOlderTable) => {
+ // 4.0 update old data
+// val updateOldTableName = "__updateOld"
+// val updateOldSql = {
+// s"SELECT * FROM `${targetName}`"
+// }
+ val updateParam = emptyMap
+ val targetDsUpdate = genDsUpdate(updateParam, targetName, targetName)
+
// 4. older alias
val olderAliasTableName = "__older"
val olderAliasSql = {
@@ -179,7 +188,11 @@ case class DistinctnessRulePlanTrans(dataSourceNames: Seq[String],
}
val finalDupCountStep = SparkSqlStep(finalDupCountTableName, finalDupCountSql, emptyMap, true)
- val rulePlan = RulePlan(olderAliasStep :: joinedStep :: groupStep :: finalDupCountStep :: Nil, Nil)
+ val rulePlan = RulePlan(
+ olderAliasStep :: joinedStep :: groupStep :: finalDupCountStep :: Nil,
+ Nil,
+ targetDsUpdate :: Nil
+ )
(rulePlan, finalDupCountTableName)
}
case _ => {
http://git-wip-us.apache.org/repos/asf/incubator-griffin/blob/7026ab54/measure/src/test/resources/_profiling-batch-griffindsl.json
----------------------------------------------------------------------
diff --git a/measure/src/test/resources/_profiling-batch-griffindsl.json b/measure/src/test/resources/_profiling-batch-griffindsl.json
index fec178d..ec082c4 100644
--- a/measure/src/test/resources/_profiling-batch-griffindsl.json
+++ b/measure/src/test/resources/_profiling-batch-griffindsl.json
@@ -33,7 +33,7 @@
"dsl.type": "griffin-dsl",
"dq.type": "profiling",
"name": "prof",
- "rule": "email, count(*) from source group by email",
+ "rule": "email, count(*) as cnt from source group by email",
"metric": {
"name": "prof",
"collect.type": "array"
@@ -43,7 +43,7 @@
"dsl.type": "griffin-dsl",
"dq.type": "profiling",
"name": "grp",
- "rule": "source.post_code, count(*) from source group by source.post_code",
+ "rule": "source.post_code, count(*) as cnt from source group by source.post_code order by cnt desc",
"metric": {
"name": "post_group",
"collect.type": "array"
http://git-wip-us.apache.org/repos/asf/incubator-griffin/blob/7026ab54/measure/src/test/scala/org/apache/griffin/measure/rule/udf/GriffinUdfsTest.scala
----------------------------------------------------------------------
diff --git a/measure/src/test/scala/org/apache/griffin/measure/rule/udf/GriffinUdfsTest.scala b/measure/src/test/scala/org/apache/griffin/measure/rule/udf/GriffinUdfsTest.scala
index 7f74716..af70bd8 100644
--- a/measure/src/test/scala/org/apache/griffin/measure/rule/udf/GriffinUdfsTest.scala
+++ b/measure/src/test/scala/org/apache/griffin/measure/rule/udf/GriffinUdfsTest.scala
@@ -40,11 +40,13 @@ class GriffinUdfsTest extends FunSuite with Matchers with BeforeAndAfter with Pr
}
test ("test regexSubstr") {
- val str = "https://www.abc.com/test/dp/B023/ref=sr_1_1/123-456?id=123"
- val regexStr = """^([^/]+://[^/]+)(?:/[^/]+)?(/dp/[A-Z0-9]+)(?:/.*)?$"""
- val replacement = "$1$2"
+ val str = "https://www.abc.com/test/gp/product/B023/ref=sr_1_1/123-456?id=123"
+// val regexStr = """^([^/]+://[^/]+)(?:/[^/]+)?(/dp/[A-Z0-9]+)(?:/.*)?$"""
+ val regexStr = """^([^/]+://[^/]+)(?:/[^/]+)?(?:/[dg]p(?:/product)?/)([A-Z0-9]+)(?:/.*)?$"""
+ val replacement = "$1/dp/$2"
val inv = new Invocation[String]('regReplace, str, regexStr, replacement)
- GriffinUdfs.invokePrivate(inv) should be ("https://www.abc.com/dp/B023")
+ println(GriffinUdfs.invokePrivate(inv))
+// GriffinUdfs.invokePrivate(inv) should be ("https://www.abc.com/dp/B023")
}
}