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Posted to commits@taverna.apache.org by st...@apache.org on 2015/03/20 15:23:01 UTC
[47/51] [abbrv] [partial] incubator-taverna-workbench git commit:
taverna-workbench-* -> taverna-*
http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/52fd79dd/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/config/ServiceDescriptionConfigUIFactory.java
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diff --git a/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/config/ServiceDescriptionConfigUIFactory.java b/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/config/ServiceDescriptionConfigUIFactory.java
new file mode 100644
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+++ b/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/config/ServiceDescriptionConfigUIFactory.java
@@ -0,0 +1,57 @@
+/*******************************************************************************
+ * Copyright (C) 2007 The University of Manchester
+ *
+ * Modifications to the initial code base are copyright of their
+ * respective authors, or their employers as appropriate.
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU Lesser General Public License
+ * as published by the Free Software Foundation; either version 2.1 of
+ * the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * Lesser General Public License for more details.
+ *
+ * You should have received a copy of the GNU Lesser General Public
+ * License along with this program; if not, write to the Free Software
+ * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
+ ******************************************************************************/
+package net.sf.taverna.t2.workbench.ui.servicepanel.config;
+
+import javax.swing.JPanel;
+
+import uk.org.taverna.configuration.Configurable;
+import uk.org.taverna.configuration.ConfigurationUIFactory;
+
+import net.sf.taverna.t2.servicedescriptions.ServiceDescriptionRegistry;
+import net.sf.taverna.t2.servicedescriptions.ServiceDescriptionsConfiguration;
+
+public class ServiceDescriptionConfigUIFactory implements ConfigurationUIFactory {
+ private ServiceDescriptionsConfiguration serviceDescriptionsConfiguration;
+ private ServiceDescriptionRegistry serviceDescriptionRegistry;
+
+ @Override
+ public boolean canHandle(String uuid) {
+ return uuid.equals(serviceDescriptionsConfiguration.getUUID());
+ }
+
+ @Override
+ public Configurable getConfigurable() {
+ return serviceDescriptionsConfiguration;
+ }
+
+ @Override
+ public JPanel getConfigurationPanel() {
+ return new ServiceDescriptionConfigPanel(serviceDescriptionsConfiguration, serviceDescriptionRegistry);
+ }
+
+ public void setServiceDescriptionRegistry(ServiceDescriptionRegistry serviceDescriptionRegistry) {
+ this.serviceDescriptionRegistry = serviceDescriptionRegistry;
+ }
+
+ public void setServiceDescriptionsConfiguration(ServiceDescriptionsConfiguration serviceDescriptionsConfiguration) {
+ this.serviceDescriptionsConfiguration = serviceDescriptionsConfiguration;
+ }
+}
http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/52fd79dd/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/menu/AddServiceProviderMenu.java
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diff --git a/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/menu/AddServiceProviderMenu.java b/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/menu/AddServiceProviderMenu.java
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+++ b/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/menu/AddServiceProviderMenu.java
@@ -0,0 +1,113 @@
+/*******************************************************************************
+ * Copyright (C) 2007 The University of Manchester
+ *
+ * Modifications to the initial code base are copyright of their
+ * respective authors, or their employers as appropriate.
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU Lesser General Public License
+ * as published by the Free Software Foundation; either version 2.1 of
+ * the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * Lesser General Public License for more details.
+ *
+ * You should have received a copy of the GNU Lesser General Public
+ * License along with this program; if not, write to the Free Software
+ * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
+ ******************************************************************************/
+package net.sf.taverna.t2.workbench.ui.servicepanel.menu;
+
+import java.awt.Component;
+import java.awt.event.ActionEvent;
+import java.util.ArrayList;
+import java.util.Collections;
+import java.util.Comparator;
+import java.util.List;
+
+import javax.swing.AbstractAction;
+import javax.swing.JButton;
+import javax.swing.JPopupMenu;
+
+import net.sf.taverna.t2.servicedescriptions.ConfigurableServiceProvider;
+import net.sf.taverna.t2.servicedescriptions.ServiceDescription;
+import net.sf.taverna.t2.servicedescriptions.ServiceDescriptionProvider;
+import net.sf.taverna.t2.servicedescriptions.ServiceDescriptionRegistry;
+import net.sf.taverna.t2.workbench.ui.servicepanel.ServicePanel;
+import net.sf.taverna.t2.workbench.ui.servicepanel.actions.AddServiceProviderAction;
+
+/**
+ * A menu that provides a set up menu actions for adding new service providers
+ * to the Service Panel.
+ * <p>
+ * The Actions are discovered from the {@link ServiceDescriptionProvider}s found
+ * through the SPI.
+ *
+ * @author Stuart Owen
+ * @author Stian Soiland-Reyes
+ * @author Alan R Williams
+ *
+ * @see ServiceDescription
+ * @see ServicePanel
+ * @see ServiceDescriptionRegistry#addServiceDescriptionProvider(ServiceDescriptionProvider)
+ */
+@SuppressWarnings("serial")
+public class AddServiceProviderMenu extends JButton {
+ public static class ServiceProviderComparator implements
+ Comparator<ServiceDescriptionProvider> {
+ @Override
+ public int compare(ServiceDescriptionProvider o1,
+ ServiceDescriptionProvider o2) {
+ return o1.getName().toLowerCase().compareTo(
+ o2.getName().toLowerCase());
+ }
+ }
+
+ private final static String ADD_SERVICE_PROVIDER_MENU_NAME = "Import new services";
+
+ private final ServiceDescriptionRegistry serviceDescriptionRegistry;
+
+ public AddServiceProviderMenu(ServiceDescriptionRegistry serviceDescriptionRegistry) {
+ super();
+ this.serviceDescriptionRegistry = serviceDescriptionRegistry;
+
+ final Component c = createCustomComponent();
+ setAction(new AbstractAction(ADD_SERVICE_PROVIDER_MENU_NAME) {
+ @Override
+ public void actionPerformed(ActionEvent e) {
+ ((JPopupMenu) c).show(AddServiceProviderMenu.this, 0,
+ AddServiceProviderMenu.this.getHeight());
+ }
+ });
+ }
+
+ private Component createCustomComponent() {
+ JPopupMenu addServiceMenu = new JPopupMenu(
+ ADD_SERVICE_PROVIDER_MENU_NAME);
+ addServiceMenu.setToolTipText("Add a new service provider");
+ boolean isEmpty = true;
+ List<ConfigurableServiceProvider> providers = new ArrayList<>(
+ serviceDescriptionRegistry.getUnconfiguredServiceProviders());
+ Collections.sort(providers, new ServiceProviderComparator());
+ for (ConfigurableServiceProvider provider : providers) {
+ /*
+ * Skip BioCatalogue's ConfigurableServiceProviderS as they should
+ * not be used to add servcie directlry but rather though the
+ * Service Catalogue perspective
+ */
+ if (provider.getId().toLowerCase().contains("servicecatalogue"))
+ continue;
+
+ AddServiceProviderAction addAction = new AddServiceProviderAction(
+ provider, this);
+ addAction.setServiceDescriptionRegistry(serviceDescriptionRegistry);
+ addServiceMenu.add(addAction);
+ isEmpty = false;
+ }
+ if (isEmpty)
+ addServiceMenu.setEnabled(false);
+ return addServiceMenu;
+ }
+}
http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/52fd79dd/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/tree/Filter.java
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diff --git a/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/tree/Filter.java b/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/tree/Filter.java
new file mode 100644
index 0000000..e67e8f5
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+++ b/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/tree/Filter.java
@@ -0,0 +1,33 @@
+/*******************************************************************************
+ * Copyright (C) 2007-2009 The University of Manchester
+ *
+ * Modifications to the initial code base are copyright of their
+ * respective authors, or their employers as appropriate.
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU Lesser General Public License
+ * as published by the Free Software Foundation; either version 2.1 of
+ * the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * Lesser General Public License for more details.
+ *
+ * You should have received a copy of the GNU Lesser General Public
+ * License along with this program; if not, write to the Free Software
+ * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
+ ******************************************************************************/
+package net.sf.taverna.t2.workbench.ui.servicepanel.tree;
+
+import javax.swing.tree.DefaultMutableTreeNode;
+
+public interface Filter {
+ boolean pass(DefaultMutableTreeNode node);
+
+ String filterRepresentation(String original);
+
+ void setSuperseded(boolean superseded);
+
+ boolean isSuperseded();
+}
http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/52fd79dd/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/tree/FilterTreeCellRenderer.java
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diff --git a/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/tree/FilterTreeCellRenderer.java b/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/tree/FilterTreeCellRenderer.java
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index 0000000..21f43c5
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+++ b/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/tree/FilterTreeCellRenderer.java
@@ -0,0 +1,59 @@
+/*******************************************************************************
+ * Copyright (C) 2007-2009 The University of Manchester
+ *
+ * Modifications to the initial code base are copyright of their
+ * respective authors, or their employers as appropriate.
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU Lesser General Public License
+ * as published by the Free Software Foundation; either version 2.1 of
+ * the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * Lesser General Public License for more details.
+ *
+ * You should have received a copy of the GNU Lesser General Public
+ * License along with this program; if not, write to the Free Software
+ * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
+ ******************************************************************************/
+package net.sf.taverna.t2.workbench.ui.servicepanel.tree;
+
+import static net.sf.taverna.t2.workbench.icons.WorkbenchIcons.folderClosedIcon;
+import static net.sf.taverna.t2.workbench.icons.WorkbenchIcons.folderOpenIcon;
+
+import java.awt.Component;
+
+import javax.swing.JTree;
+import javax.swing.tree.DefaultTreeCellRenderer;
+
+@SuppressWarnings("serial")
+public class FilterTreeCellRenderer extends DefaultTreeCellRenderer {
+ private Filter filter = null;
+
+ @Override
+ public Component getTreeCellRendererComponent(JTree tree, Object value,
+ boolean sel, boolean expanded, boolean leaf, int row,
+ boolean hasFocus) {
+
+ super.getTreeCellRendererComponent(tree, value, sel, expanded, leaf,
+ row, hasFocus);
+ Filter filter = getFilter();
+ if (filter != null)
+ setText(filter.filterRepresentation(getText()));
+ if (expanded)
+ setIcon(folderOpenIcon);
+ else
+ setIcon(folderClosedIcon);
+ return this;
+ }
+
+ public Filter getFilter() {
+ return filter;
+ }
+
+ public void setFilter(Filter currentFilter) {
+ this.filter = currentFilter;
+ }
+}
http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/52fd79dd/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/tree/FilterTreeModel.java
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diff --git a/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/tree/FilterTreeModel.java b/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/tree/FilterTreeModel.java
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+++ b/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/tree/FilterTreeModel.java
@@ -0,0 +1,92 @@
+/*******************************************************************************
+ * Copyright (C) 2007-2009 The University of Manchester
+ *
+ * Modifications to the initial code base are copyright of their
+ * respective authors, or their employers as appropriate.
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU Lesser General Public License
+ * as published by the Free Software Foundation; either version 2.1 of
+ * the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * Lesser General Public License for more details.
+ *
+ * You should have received a copy of the GNU Lesser General Public
+ * License along with this program; if not, write to the Free Software
+ * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
+ ******************************************************************************/
+package net.sf.taverna.t2.workbench.ui.servicepanel.tree;
+
+import java.util.ArrayList;
+import java.util.List;
+
+import javax.swing.tree.DefaultTreeModel;
+import javax.swing.tree.TreePath;
+
+import org.apache.log4j.Logger;
+
+public final class FilterTreeModel extends DefaultTreeModel {
+ private static final long serialVersionUID = -8931308369832839862L;
+ private static final Logger logger = Logger
+ .getLogger(FilterTreeModel.class);
+
+ Filter currentFilter;
+
+ public FilterTreeModel(FilterTreeNode node) {
+ this(node, null);
+ }
+
+ public FilterTreeModel(FilterTreeNode node, Filter filter) {
+ super(node);
+ currentFilter = filter;
+ node.setFilter(filter);
+ }
+
+ public void setFilter(Filter filter) {
+ if (root != null) {
+ currentFilter = filter;
+ ((FilterTreeNode) root).setFilter(filter);
+ Object[] path = { root };
+ fireTreeStructureChanged(this, path, null, null);
+ }
+ }
+
+ @Override
+ public int getChildCount(Object parent) {
+ if (parent instanceof FilterTreeNode)
+ return (((FilterTreeNode) parent).getChildCount());
+ return 0;
+ }
+
+ @Override
+ public Object getChild(Object parent, int index) {
+ if (parent instanceof FilterTreeNode)
+ return (((FilterTreeNode) parent).getChildAt(index));
+ return null;
+ }
+
+ /**
+ * @return the currentFilter
+ */
+ public Filter getCurrentFilter() {
+ return currentFilter;
+ }
+
+ public TreePath getTreePathForObjectPath(List<Object> path) {
+ List<FilterTreeNode> resultList = new ArrayList<>();
+ FilterTreeNode current = (FilterTreeNode) root;
+ resultList.add(current);
+ for (int i = 1; (i < path.size()) && (current != null); i++) {
+ logger.debug("Looking in " + current.getUserObject() + " for " + path.get(i));
+ current = current.getChildForObject(path.get(i));
+ if (current != null)
+ resultList.add(current);
+ }
+ if (current != null)
+ return new TreePath(resultList.toArray());
+ return null;
+ }
+}
http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/52fd79dd/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/tree/FilterTreeNode.java
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diff --git a/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/tree/FilterTreeNode.java b/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/tree/FilterTreeNode.java
new file mode 100644
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+++ b/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/tree/FilterTreeNode.java
@@ -0,0 +1,142 @@
+/*******************************************************************************
+ * Copyright (C) 2007-2009 The University of Manchester
+ *
+ * Modifications to the initial code base are copyright of their
+ * respective authors, or their employers as appropriate.
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU Lesser General Public License
+ * as published by the Free Software Foundation; either version 2.1 of
+ * the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * Lesser General Public License for more details.
+ *
+ * You should have received a copy of the GNU Lesser General Public
+ * License along with this program; if not, write to the Free Software
+ * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
+ ******************************************************************************/
+package net.sf.taverna.t2.workbench.ui.servicepanel.tree;
+
+import java.util.ArrayList;
+import java.util.HashSet;
+import java.util.List;
+import java.util.Set;
+
+import javax.swing.tree.DefaultMutableTreeNode;
+
+import org.apache.log4j.Logger;
+
+public class FilterTreeNode extends DefaultMutableTreeNode {
+ private static final long serialVersionUID = 1933553584349932151L;
+ @SuppressWarnings("unused")
+ private static Logger logger = Logger.getLogger(FilterTreeNode.class);
+
+ private Filter filter;
+ private boolean passed = true;
+ private List<FilterTreeNode> filteredChildren = new ArrayList<>();
+
+ public FilterTreeNode(Object userObject) {
+ super(userObject);
+ userObject.toString();
+ }
+
+ public Filter getFilter() {
+ return filter;
+ }
+
+ public void setFilter(Filter filter) {
+ if ((filter == null) || !filter.isSuperseded()) {
+ this.filter = filter;
+ passed = false;
+ filteredChildren.clear();
+ if (filter == null) {
+ passed = true;
+ passFilterDown(null);
+ } else if (filter.pass(this)) {
+ passed = true;
+ passFilterDown(null);
+ } else {
+ passFilterDown(filter);
+ passed = filteredChildren.size() != 0;
+ }
+ }
+ }
+
+ private void passFilterDown(Filter filter) {
+ int realChildCount = super.getChildCount();
+ for (int i = 0; i < realChildCount; i++) {
+ FilterTreeNode realChild = (FilterTreeNode) super.getChildAt(i);
+ realChild.setFilter(filter);
+ if (realChild.isPassed())
+ filteredChildren.add(realChild);
+ }
+ }
+
+ public void add(FilterTreeNode node) {
+ super.add(node);
+ node.setFilter(filter);
+ // TODO work up
+ if (node.isPassed())
+ filteredChildren.add(node);
+ }
+
+ @Override
+ public void remove(int childIndex) {
+ if (filter != null)
+ // as child indexes might be inconsistent..
+ throw new IllegalStateException("Can't remove while the filter is active");
+ super.remove(childIndex);
+ }
+
+ @Override
+ public int getChildCount() {
+ if (filter == null)
+ return super.getChildCount();
+ return filteredChildren.size();
+ }
+
+ @Override
+ public FilterTreeNode getChildAt(int index) {
+ if (filter == null)
+ return (FilterTreeNode) super.getChildAt(index);
+ return filteredChildren.get(index);
+ }
+
+ public boolean isPassed() {
+ return passed;
+ }
+
+ public Set<FilterTreeNode> getLeaves() {
+ Set<FilterTreeNode> result = new HashSet<>();
+ if (super.getChildCount() == 0) {
+ result.add(this);
+ return result;
+ }
+
+ for (int i = 0; i < super.getChildCount(); i++) {
+ FilterTreeNode child = (FilterTreeNode) super.getChildAt(i);
+ result.addAll(child.getLeaves());
+ }
+ return result;
+ }
+
+ public FilterTreeNode getChildForObject(Object userObject) {
+ FilterTreeNode result = null;
+ for (int i=0; (i < super.getChildCount()) && (result == null); i++) {
+ FilterTreeNode child = (FilterTreeNode) super.getChildAt(i);
+ Object nodeObject = child.getUserObject();
+// logger.info("nodeObject is a " + nodeObject.getClass() + " - " +
+// "userObject is a " + userObject.getClass());
+ if (nodeObject.toString().equals(userObject.toString())) {
+ result = child;
+// logger.info(nodeObject + " is equal to " + userObject);
+// } else {
+// logger.info(nodeObject + " is not equal to " + userObject);
+ }
+ }
+ return result;
+ }
+}
http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/52fd79dd/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/tree/FilterTreeSelectionModel.java
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diff --git a/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/tree/FilterTreeSelectionModel.java b/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/tree/FilterTreeSelectionModel.java
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index 0000000..a5adfe9
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+++ b/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/tree/FilterTreeSelectionModel.java
@@ -0,0 +1,46 @@
+/*******************************************************************************
+ * Copyright (C) 2007 The University of Manchester
+ *
+ * Modifications to the initial code base are copyright of their
+ * respective authors, or their employers as appropriate.
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU Lesser General Public License
+ * as published by the Free Software Foundation; either version 2.1 of
+ * the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * Lesser General Public License for more details.
+ *
+ * You should have received a copy of the GNU Lesser General Public
+ * License along with this program; if not, write to the Free Software
+ * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
+ ******************************************************************************/
+package net.sf.taverna.t2.workbench.ui.servicepanel.tree;
+
+import javax.swing.tree.DefaultTreeSelectionModel;
+import javax.swing.tree.TreePath;
+import javax.swing.tree.TreeSelectionModel;
+
+public class FilterTreeSelectionModel extends DefaultTreeSelectionModel{
+ private static final long serialVersionUID = 3127644524735089630L;
+
+ public FilterTreeSelectionModel(){
+ super();
+ setSelectionMode(TreeSelectionModel.SINGLE_TREE_SELECTION);
+ }
+
+ @Override
+ public void setSelectionPath(TreePath path) {
+ /*
+ * Nothing happens here - only calls to mySetSelectionPath() will have
+ * the effect of a node being selected.
+ */
+ }
+
+ public void mySetSelectionPath(TreePath path) {
+ super.setSelectionPath(path);
+ }
+}
http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/52fd79dd/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/tree/MyFilter.java
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diff --git a/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/tree/MyFilter.java b/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/tree/MyFilter.java
new file mode 100644
index 0000000..8baa0eb
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+++ b/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/tree/MyFilter.java
@@ -0,0 +1,89 @@
+/*******************************************************************************
+ * Copyright (C) 2007-2009 The University of Manchester
+ *
+ * Modifications to the initial code base are copyright of their
+ * respective authors, or their employers as appropriate.
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU Lesser General Public License
+ * as published by the Free Software Foundation; either version 2.1 of
+ * the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * Lesser General Public License for more details.
+ *
+ * You should have received a copy of the GNU Lesser General Public
+ * License along with this program; if not, write to the Free Software
+ * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
+ ******************************************************************************/
+package net.sf.taverna.t2.workbench.ui.servicepanel.tree;
+
+import javax.swing.tree.DefaultMutableTreeNode;
+
+public class MyFilter implements Filter {
+ private static final String HTML_MATCH_END = "</font><font color=\"black\">";
+ private static final String HTML_MATCH_START = "</font><font color=\"red\">";
+ private static final String HTML_POSTFIX = "</font></html>";
+ private static final String HTML_PREFIX = "<html><font color=\"black\">";
+
+ private String filterString;
+ private boolean superseded;
+ private String filterLowerCase;
+
+ public MyFilter(String filterString) {
+ this.filterString = filterString;
+ this.filterLowerCase = filterString.toLowerCase();
+ this.superseded = false;
+ }
+
+ private boolean basicFilter(DefaultMutableTreeNode node) {
+ if (filterString.isEmpty())
+ return true;
+ return node.getUserObject().toString().toLowerCase()
+ .contains(filterLowerCase);
+ }
+
+ @Override
+ public boolean pass(DefaultMutableTreeNode node) {
+ return basicFilter(node);
+ }
+
+ @Override
+ public String filterRepresentation(String original) {
+ StringBuilder sb = new StringBuilder(HTML_PREFIX);
+ int from = 0;
+ String originalLowerCase = original.toLowerCase();
+ int index = originalLowerCase.indexOf(filterLowerCase, from);
+ while (index > -1) {
+ sb.append(original.substring(from, index));
+ sb.append(HTML_MATCH_START);
+ sb.append(original.substring(index,
+ index + filterLowerCase.length()));
+ sb.append(HTML_MATCH_END);
+ from = index + filterLowerCase.length();
+ index = originalLowerCase.indexOf(filterLowerCase, from);
+ }
+ if (from < original.length())
+ sb.append(original.substring(from, original.length()));
+ return sb.append(HTML_POSTFIX).toString();
+ }
+
+ /**
+ * @return the superseded
+ */
+ @Override
+ public boolean isSuperseded() {
+ return superseded;
+ }
+
+ /**
+ * @param superseded
+ * the superseded to set
+ */
+ @Override
+ public void setSuperseded(boolean superseded) {
+ this.superseded = superseded;
+ }
+}
http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/52fd79dd/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/tree/TreePanel.java
----------------------------------------------------------------------
diff --git a/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/tree/TreePanel.java b/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/tree/TreePanel.java
new file mode 100644
index 0000000..46eca53
--- /dev/null
+++ b/taverna-activity-palette-ui/src/main/java/net/sf/taverna/t2/workbench/ui/servicepanel/tree/TreePanel.java
@@ -0,0 +1,371 @@
+/*******************************************************************************
+ * Copyright (C) 2007-2009 The University of Manchester
+ *
+ * Modifications to the initial code base are copyright of their
+ * respective authors, or their employers as appropriate.
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU Lesser General Public License
+ * as published by the Free Software Foundation; either version 2.1 of
+ * the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * Lesser General Public License for more details.
+ *
+ * You should have received a copy of the GNU Lesser General Public
+ * License along with this program; if not, write to the Free Software
+ * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
+ ******************************************************************************/
+package net.sf.taverna.t2.workbench.ui.servicepanel.tree;
+
+import static java.awt.BorderLayout.CENTER;
+import static java.awt.BorderLayout.NORTH;
+import static java.awt.BorderLayout.WEST;
+import static java.awt.Color.GRAY;
+import static java.awt.GridBagConstraints.HORIZONTAL;
+import static java.awt.GridBagConstraints.NONE;
+import static javax.swing.SwingUtilities.invokeLater;
+import static net.sf.taverna.t2.lang.ui.EdgeLineBorder.TOP;
+
+import java.awt.BorderLayout;
+import java.awt.Component;
+import java.awt.GridBagConstraints;
+import java.awt.GridBagLayout;
+import java.awt.event.ActionEvent;
+import java.awt.event.ActionListener;
+import java.awt.event.KeyAdapter;
+import java.awt.event.KeyEvent;
+import java.lang.reflect.InvocationTargetException;
+import java.util.ArrayList;
+import java.util.Enumeration;
+import java.util.HashSet;
+import java.util.List;
+import java.util.Set;
+import java.util.Timer;
+import java.util.TimerTask;
+
+import javax.swing.JButton;
+import javax.swing.JLabel;
+import javax.swing.JPanel;
+import javax.swing.JScrollPane;
+import javax.swing.JTextField;
+import javax.swing.JTree;
+import javax.swing.border.CompoundBorder;
+import javax.swing.border.EmptyBorder;
+import javax.swing.event.TreeExpansionEvent;
+import javax.swing.event.TreeExpansionListener;
+import javax.swing.tree.TreeCellRenderer;
+import javax.swing.tree.TreePath;
+
+import net.sf.taverna.t2.lang.ui.EdgeLineBorder;
+
+import org.apache.log4j.Logger;
+
+@SuppressWarnings("serial")
+public abstract class TreePanel extends JPanel {
+ private static int MAX_EXPANSION = 100;
+ private static final int SEARCH_WIDTH = 15;
+ private static Logger logger = Logger.getLogger(TreePanel.class);
+
+ protected Set<List<Object>> expandedPaths = new HashSet<>();
+ protected FilterTreeModel filterTreeModel;
+ protected JTextField searchField = new JTextField(SEARCH_WIDTH);
+ protected JTree tree = new JTree();
+ protected JScrollPane treeScrollPane;
+
+ private String availableObjectsString = "";
+ private String matchingObjectsString = "";
+ private String noMatchingObjectsString = "";
+
+ private TreeExpandCollapseListener treeExpandListener = new TreeExpandCollapseListener();
+ private Object filterLock = new Object();
+
+ public TreePanel(FilterTreeModel treeModel) {
+ filterTreeModel = treeModel;
+ }
+
+ public void expandTreePaths() throws InterruptedException,
+ InvocationTargetException {
+// Filter appliedFilter = filterTreeModel.getCurrentFilter();
+// if (appliedFilter == null) {
+ for (int i = 0; (i < tree.getRowCount()) && (i < MAX_EXPANSION); i++)
+ tree.expandRow(i);
+// } else {
+// boolean rowsFinished = false;
+// for (int i = 0; (!appliedFilter.isSuperseded()) && (!rowsFinished)
+// && (i < MAX_EXPANSION); i++) {
+// TreePath tp = tree.getPathForRow(i);
+// if (tp == null) {
+// rowsFinished = true;
+// } else {
+// if (!appliedFilter.pass((DefaultMutableTreeNode) tp
+// .getLastPathComponent())) {
+// tree.expandRow(i);
+// }
+// }
+// }
+// }
+ }
+
+ public void expandAll(FilterTreeNode node, boolean expand) {
+ @SuppressWarnings("unused")
+ FilterTreeNode root = (FilterTreeNode) tree.getModel().getRoot();
+
+ // Traverse tree from root
+ expandAll(new TreePath(node.getPath()), expand);
+ }
+
+ @SuppressWarnings("rawtypes")
+ private void expandAll(TreePath parent, boolean expand) {
+ // Traverse children
+ FilterTreeNode node = (FilterTreeNode) parent.getLastPathComponent();
+ if (node.getChildCount() >= 0)
+ for (Enumeration e=node.children(); e.hasMoreElements(); ) {
+ FilterTreeNode n = (FilterTreeNode) e.nextElement();
+ TreePath path = parent.pathByAddingChild(n);
+ expandAll(path, expand);
+ }
+
+ // Expansion or collapse must be done bottom-up
+ if (expand)
+ tree.expandPath(parent);
+ else
+ tree.collapsePath(parent);
+ }
+
+ protected void initialize() {
+ setLayout(new BorderLayout());
+ treeScrollPane = new JScrollPane(tree);
+ tree.setModel(filterTreeModel);
+ tree.addTreeExpansionListener(treeExpandListener);
+ tree.setCellRenderer(createCellRenderer());
+ tree.setSelectionModel(new FilterTreeSelectionModel());
+
+ JPanel topPanel = new JPanel();
+ topPanel.setBorder(new CompoundBorder(new EdgeLineBorder(TOP, GRAY), new EmptyBorder(10, 5, 0, 5)));
+ topPanel.setLayout(new GridBagLayout());
+ GridBagConstraints c = new GridBagConstraints();
+
+ JLabel filterLabel = new JLabel("Filter: ");
+ c.fill = NONE;
+ c.gridx = 0;
+ c.gridy = 0;
+ c.weightx = 0.0;
+ c.anchor = GridBagConstraints.LINE_START;
+ topPanel.add(filterLabel, c);
+
+ c.fill = HORIZONTAL;
+ c.gridx = 1;
+ c.gridy = 0;
+ c.weightx = 1.0;
+ topPanel.add(searchField, c);
+
+
+ c.fill = NONE;
+ c.gridx = 2;
+ c.gridy = 0;
+ c.weightx = 0.0;
+ final JButton clearButton = new JButton("Clear");
+ clearButton.addActionListener(new ActionListener() {
+ @Override
+ public void actionPerformed(ActionEvent e) {
+ searchField.setText("");
+ invokeLater(new RunFilter());
+ clearButton.getParent().requestFocusInWindow();// so that the button does not stay focused after it is clicked on and did its action
+ }
+ });
+ topPanel.add(clearButton, c);
+
+ c.gridx = 3;
+ c.weightx = 0.2;
+ topPanel.add(new JPanel(), c);
+
+ JPanel topExtraPanel = new JPanel(new BorderLayout());
+
+ topExtraPanel.add(topPanel, NORTH);
+
+ Component extraComponent = createExtraComponent();
+ if (extraComponent != null) {
+ JPanel extraPanel = new JPanel();
+ extraPanel.setLayout(new BorderLayout());
+ extraPanel.add(extraComponent, WEST);
+ topExtraPanel.add(extraPanel, CENTER);
+ }
+
+ add(topExtraPanel, NORTH);
+ add(treeScrollPane, CENTER);
+
+ searchField.addKeyListener(new SearchFieldKeyAdapter());
+ }
+
+ protected Component createExtraComponent() {
+ return null;
+ }
+
+ protected TreeCellRenderer createCellRenderer() {
+ return new FilterTreeCellRenderer();
+ }
+
+ public void runFilter() throws InterruptedException,
+ InvocationTargetException {
+ /*
+ * Special lock object, don't do a synchronized model, as the lock on
+ * JComponent might deadlock when painting the panel - see comments at
+ * http://www.mygrid.org.uk/dev/issues/browse/T2-1438
+ */
+ synchronized (filterLock) {
+ tree.removeTreeExpansionListener(treeExpandListener);
+ String text = searchField.getText();
+ FilterTreeNode root = (FilterTreeNode) tree.getModel().getRoot();
+ if (text.isEmpty()) {
+ setFilter(null);
+ root.setUserObject(getAvailableObjectsString());
+ filterTreeModel.nodeChanged(root);
+ for (List<Object> tp : expandedPaths) {
+ // for (int i = 0; i < tp.length; i++)
+ // logger.info("Trying to expand " + tp[i]);
+ tree.expandPath(filterTreeModel.getTreePathForObjectPath(tp));
+ }
+ } else {
+ setFilter(createFilter(text));
+ root.setUserObject(root.getChildCount() > 0 ? getMatchingObjectsString()
+ : getNoMatchingObjectsString());
+ filterTreeModel.nodeChanged(root);
+ expandTreePaths();
+ }
+ tree.addTreeExpansionListener(treeExpandListener);
+ }
+ }
+
+ /**
+ * @return the availableObjectsString
+ */
+ public String getAvailableObjectsString() {
+ return availableObjectsString;
+ }
+
+ /**
+ * @param availableObjectsString the availableObjectsString to set
+ */
+ public void setAvailableObjectsString(String availableObjectsString) {
+ this.availableObjectsString = availableObjectsString;
+ }
+
+ /**
+ * @return the matchingObjectsString
+ */
+ public String getMatchingObjectsString() {
+ return matchingObjectsString;
+ }
+
+ /**
+ * @param matchingObjectsString the matchingObjectsString to set
+ */
+ public void setMatchingObjectsString(String matchingObjectsString) {
+ this.matchingObjectsString = matchingObjectsString;
+ }
+
+ /**
+ * @return the noMatchingObjectsString
+ */
+ public String getNoMatchingObjectsString() {
+ return noMatchingObjectsString;
+ }
+
+ /**
+ * @param noMatchingObjectsString the noMatchingObjectsString to set
+ */
+ public void setNoMatchingObjectsString(String noMatchingObjectsString) {
+ this.noMatchingObjectsString = noMatchingObjectsString;
+ }
+
+ public Filter createFilter(String text) {
+ return new MyFilter(text);
+ }
+
+ public void setFilter(Filter filter) {
+ if (tree.getCellRenderer() instanceof FilterTreeCellRenderer)
+ ((FilterTreeCellRenderer)tree.getCellRenderer()).setFilter(filter);
+ filterTreeModel.setFilter(filter);
+ }
+
+ protected class ExpandRowRunnable implements Runnable {
+ int rowNumber;
+
+ public ExpandRowRunnable(int rowNumber) {
+ this.rowNumber = rowNumber;
+ }
+
+ @Override
+ public void run() {
+ tree.expandRow(rowNumber);
+ }
+ }
+
+ protected class RunFilter implements Runnable {
+ @Override
+ public void run() {
+ Filter oldFilter = filterTreeModel.getCurrentFilter();
+ if (oldFilter != null)
+ oldFilter.setSuperseded(true);
+ try {
+ runFilter();
+ } catch (InterruptedException e) {
+ Thread.interrupted();
+ } catch (InvocationTargetException e) {
+ logger.error("", e);
+ }
+ }
+ }
+
+ protected class SearchFieldKeyAdapter extends KeyAdapter {
+ private final Runnable runFilterRunnable;
+ Timer timer = new Timer("Search field timer", true);
+
+ private SearchFieldKeyAdapter() {
+ this.runFilterRunnable = new RunFilter();
+ }
+
+ @Override
+ public void keyReleased(KeyEvent e) {
+ timer.cancel();
+ timer = new Timer();
+ timer.schedule(new TimerTask() {
+ @Override
+ public void run() {
+ invokeLater(runFilterRunnable);
+ }
+ }, 500);
+ }
+ }
+
+ private void noteExpansions() {
+ expandedPaths.clear();
+ TreePath rootPath = new TreePath(filterTreeModel.getRoot());
+ for (Enumeration<TreePath> e = tree.getExpandedDescendants(rootPath); e.hasMoreElements();) {
+ List<Object> userObjects = new ArrayList<>();
+ Object[] expandedPath = e.nextElement().getPath();
+ for (int i = 0; i < expandedPath.length; i++) {
+ FilterTreeNode node = (FilterTreeNode) expandedPath[i];
+// logger.info("The object in the path is a " + expandedPath[i].getClass());
+ userObjects.add(node.getUserObject());
+// logger.info("Added " + node.getUserObject() + " to path");
+ }
+ expandedPaths.add(userObjects);
+ }
+ }
+
+ protected class TreeExpandCollapseListener implements TreeExpansionListener {
+ @Override
+ public void treeCollapsed(TreeExpansionEvent event) {
+ noteExpansions();
+ }
+
+ @Override
+ public void treeExpanded(TreeExpansionEvent event) {
+ noteExpansions();
+ }
+ }
+}
http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/52fd79dd/taverna-activity-palette-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.workbench.ui.zaria.UIComponentFactorySPI
----------------------------------------------------------------------
diff --git a/taverna-activity-palette-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.workbench.ui.zaria.UIComponentFactorySPI b/taverna-activity-palette-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.workbench.ui.zaria.UIComponentFactorySPI
new file mode 100644
index 0000000..bb87331
--- /dev/null
+++ b/taverna-activity-palette-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.workbench.ui.zaria.UIComponentFactorySPI
@@ -0,0 +1 @@
+net.sf.taverna.t2.workbench.ui.servicepanel.ServicePanelComponentFactory
\ No newline at end of file
http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/52fd79dd/taverna-activity-palette-ui/src/main/resources/META-INF/spring/activity-palette-ui-context-osgi.xml
----------------------------------------------------------------------
diff --git a/taverna-activity-palette-ui/src/main/resources/META-INF/spring/activity-palette-ui-context-osgi.xml b/taverna-activity-palette-ui/src/main/resources/META-INF/spring/activity-palette-ui-context-osgi.xml
new file mode 100644
index 0000000..2d96b28
--- /dev/null
+++ b/taverna-activity-palette-ui/src/main/resources/META-INF/spring/activity-palette-ui-context-osgi.xml
@@ -0,0 +1,20 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<beans:beans xmlns="http://www.springframework.org/schema/osgi" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+ xmlns:beans="http://www.springframework.org/schema/beans"
+ xsi:schemaLocation="http://www.springframework.org/schema/beans
+ http://www.springframework.org/schema/beans/spring-beans.xsd
+ http://www.springframework.org/schema/osgi
+ http://www.springframework.org/schema/osgi/spring-osgi.xsd">
+
+ <service ref="ServiceDescriptionConfigUIFactory" interface="uk.org.taverna.configuration.ConfigurationUIFactory" />
+
+ <service ref="ServicePanelComponentFactory" interface="net.sf.taverna.t2.workbench.ui.zaria.UIComponentFactorySPI" />
+
+ <reference id="editManager" interface="net.sf.taverna.t2.workbench.edits.EditManager" />
+ <reference id="menuManager" interface="net.sf.taverna.t2.ui.menu.MenuManager" />
+ <reference id="selectionManager" interface="net.sf.taverna.t2.workbench.selection.SelectionManager" />
+ <reference id="serviceDescriptionRegistry" interface="net.sf.taverna.t2.servicedescriptions.ServiceDescriptionRegistry"/>
+ <reference id="serviceDescriptionsConfiguration" interface="net.sf.taverna.t2.servicedescriptions.ServiceDescriptionsConfiguration"/>
+ <reference id="serviceRegistry" interface="uk.org.taverna.commons.services.ServiceRegistry" />
+
+</beans:beans>
http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/52fd79dd/taverna-activity-palette-ui/src/main/resources/META-INF/spring/activity-palette-ui-context.xml
----------------------------------------------------------------------
diff --git a/taverna-activity-palette-ui/src/main/resources/META-INF/spring/activity-palette-ui-context.xml b/taverna-activity-palette-ui/src/main/resources/META-INF/spring/activity-palette-ui-context.xml
new file mode 100644
index 0000000..f0a11c1
--- /dev/null
+++ b/taverna-activity-palette-ui/src/main/resources/META-INF/spring/activity-palette-ui-context.xml
@@ -0,0 +1,22 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<beans xmlns="http://www.springframework.org/schema/beans"
+ xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+ xsi:schemaLocation="http://www.springframework.org/schema/beans
+ http://www.springframework.org/schema/beans/spring-beans.xsd">
+
+ <bean id="ServiceDescriptionConfigUIFactory"
+ class="net.sf.taverna.t2.workbench.ui.servicepanel.config.ServiceDescriptionConfigUIFactory">
+ <property name="serviceDescriptionRegistry" ref="serviceDescriptionRegistry" />
+ <property name="serviceDescriptionsConfiguration" ref="serviceDescriptionsConfiguration" />
+ </bean>
+
+ <bean id="ServicePanelComponentFactory"
+ class="net.sf.taverna.t2.workbench.ui.servicepanel.ServicePanelComponentFactory">
+ <property name="editManager" ref="editManager" />
+ <property name="menuManager" ref="menuManager" />
+ <property name="selectionManager" ref="selectionManager" />
+ <property name="serviceDescriptionRegistry" ref="serviceDescriptionRegistry" />
+ <property name="serviceRegistry" ref="serviceRegistry" />
+ </bean>
+
+</beans>
http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/52fd79dd/taverna-activity-tools/pom.xml
----------------------------------------------------------------------
diff --git a/taverna-activity-tools/pom.xml b/taverna-activity-tools/pom.xml
new file mode 100644
index 0000000..53619a4
--- /dev/null
+++ b/taverna-activity-tools/pom.xml
@@ -0,0 +1,46 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!--
+ Licensed to the Apache Software Foundation (ASF) under one or more
+ contributor license agreements. See the NOTICE file distributed with
+ this work for additional information regarding copyright ownership.
+ The ASF licenses this file to You under the Apache License, Version 2.0
+ (the "License"); you may not use this file except in compliance with
+ the License. You may obtain a copy of the License at
+
+ http://www.apache.org/licenses/LICENSE-2.0
+
+ Unless required by applicable law or agreed to in writing, software
+ distributed under the License is distributed on an "AS IS" BASIS,
+ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ See the License for the specific language governing permissions and
+ limitations under the License.
+-->
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+ xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
+ <modelVersion>4.0.0</modelVersion>
+ <parent>
+ <groupId>org.apache.taverna.workbench</groupId>
+ <artifactId>taverna-workbench</artifactId>
+ <version>3.1.0-incubating-SNAPSHOT</version>
+ </parent>
+ <artifactId>taverna-activity-tools</artifactId>
+ <packaging>bundle</packaging>
+ <name>Apache Taverna Activity tools</name>
+ <dependencies>
+ <dependency>
+ <groupId>${project.parent.groupId}</groupId>
+ <artifactId>taverna-menu-api</artifactId>
+ <version>${project.parent.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>${project.parent.groupId}</groupId>
+ <artifactId>taverna-workbench-api</artifactId>
+ <version>${project.parent.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.taverna.language</groupId>
+ <artifactId>taverna-scufl2-api</artifactId>
+ <version>${taverna.language.version}</version>
+ </dependency>
+ </dependencies>
+</project>
http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/52fd79dd/taverna-activity-tools/src/main/java/net/sf/taverna/t2/workbench/activitytools/AbstractConfigureActivityMenuAction.java
----------------------------------------------------------------------
diff --git a/taverna-activity-tools/src/main/java/net/sf/taverna/t2/workbench/activitytools/AbstractConfigureActivityMenuAction.java b/taverna-activity-tools/src/main/java/net/sf/taverna/t2/workbench/activitytools/AbstractConfigureActivityMenuAction.java
new file mode 100644
index 0000000..4744774
--- /dev/null
+++ b/taverna-activity-tools/src/main/java/net/sf/taverna/t2/workbench/activitytools/AbstractConfigureActivityMenuAction.java
@@ -0,0 +1,64 @@
+package net.sf.taverna.t2.workbench.activitytools;
+
+import static javax.swing.Action.NAME;
+
+import java.awt.Frame;
+import java.net.URI;
+
+import javax.swing.Action;
+
+import uk.org.taverna.scufl2.api.activity.Activity;
+import uk.org.taverna.scufl2.api.common.Scufl2Tools;
+import uk.org.taverna.scufl2.api.core.Processor;
+import uk.org.taverna.scufl2.api.profiles.ProcessorBinding;
+import uk.org.taverna.scufl2.api.profiles.Profile;
+import net.sf.taverna.t2.ui.menu.AbstractContextualMenuAction;
+import net.sf.taverna.t2.workbench.ui.Utils;
+
+public abstract class AbstractConfigureActivityMenuAction extends AbstractContextualMenuAction {
+ private static final URI configureSection = URI
+ .create("http://taverna.sf.net/2009/contextMenu/configure");
+
+ protected Scufl2Tools scufl2Tools = new Scufl2Tools();
+ protected final URI activityType;
+
+ public AbstractConfigureActivityMenuAction(URI activityType) {
+ super(configureSection, 50);
+ this.activityType = activityType;
+ }
+
+ @Override
+ public boolean isEnabled() {
+ return super.isEnabled() && findActivity() != null;
+ }
+
+ protected Activity findActivity() {
+ if (getContextualSelection() == null)
+ return null;
+ Object selection = getContextualSelection().getSelection();
+ if (selection instanceof Activity) {
+ Activity activity = (Activity) selection;
+ if (activity.getType().equals(activityType))
+ return activity;
+ }
+ if (selection instanceof Processor) {
+ Processor processor = (Processor) selection;
+ Profile profile = processor.getParent().getParent().getMainProfile();
+ for (ProcessorBinding processorBinding : scufl2Tools.processorBindingsForProcessor(processor, profile))
+ if (processorBinding.getBoundActivity().getType().equals(activityType))
+ return processorBinding.getBoundActivity();
+ }
+ return null;
+ }
+
+ protected Frame getParentFrame() {
+ return Utils.getParentFrame(getContextualSelection()
+ .getRelativeToComponent());
+ }
+
+ protected void addMenuDots(Action configAction) {
+ String oldName = (String) configAction.getValue(NAME);
+ if (!oldName.endsWith(".."))
+ configAction.putValue(NAME, oldName + "...");
+ }
+}
\ No newline at end of file
http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/52fd79dd/taverna-configuration-api/pom.xml
----------------------------------------------------------------------
diff --git a/taverna-configuration-api/pom.xml b/taverna-configuration-api/pom.xml
new file mode 100644
index 0000000..83ca7eb
--- /dev/null
+++ b/taverna-configuration-api/pom.xml
@@ -0,0 +1,37 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!--
+ Licensed to the Apache Software Foundation (ASF) under one or more
+ contributor license agreements. See the NOTICE file distributed with
+ this work for additional information regarding copyright ownership.
+ The ASF licenses this file to You under the Apache License, Version 2.0
+ (the "License"); you may not use this file except in compliance with
+ the License. You may obtain a copy of the License at
+
+ http://www.apache.org/licenses/LICENSE-2.0
+
+ Unless required by applicable law or agreed to in writing, software
+ distributed under the License is distributed on an "AS IS" BASIS,
+ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ See the License for the specific language governing permissions and
+ limitations under the License.
+-->
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+ xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
+ <modelVersion>4.0.0</modelVersion>
+ <parent>
+ <groupId>org.apache.taverna.workbench</groupId>
+ <artifactId>taverna-workbench</artifactId>
+ <version>3.1.0-incubating-SNAPSHOT</version>
+ </parent>
+ <artifactId>taverna-configuration-ui-api</artifactId>
+ <packaging>bundle</packaging>
+ <name>Apache Taverna Configuration Management UI API</name>
+
+ <dependencies>
+ <dependency>
+ <groupId>org.apache.taverna.osgi</groupId>
+ <artifactId>taverna-configuration-api</artifactId>
+ <version>${taverna.osgi.version}</version>
+ </dependency>
+ </dependencies>
+</project>
http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/52fd79dd/taverna-configuration-api/src/main/java/net/sf/taverna/t2/workbench/configuration/colour/ColourManager.java
----------------------------------------------------------------------
diff --git a/taverna-configuration-api/src/main/java/net/sf/taverna/t2/workbench/configuration/colour/ColourManager.java b/taverna-configuration-api/src/main/java/net/sf/taverna/t2/workbench/configuration/colour/ColourManager.java
new file mode 100644
index 0000000..4d5356f
--- /dev/null
+++ b/taverna-configuration-api/src/main/java/net/sf/taverna/t2/workbench/configuration/colour/ColourManager.java
@@ -0,0 +1,41 @@
+/*******************************************************************************
+ * Copyright (C) 2011 The University of Manchester
+ *
+ * Modifications to the initial code base are copyright of their
+ * respective authors, or their employers as appropriate.
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU Lesser General Public License
+ * as published by the Free Software Foundation; either version 2.1 of
+ * the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * Lesser General Public License for more details.
+ *
+ * You should have received a copy of the GNU Lesser General Public
+ * License along with this program; if not, write to the Free Software
+ * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
+ ******************************************************************************/
+package net.sf.taverna.t2.workbench.configuration.colour;
+
+import java.awt.Color;
+
+import uk.org.taverna.configuration.Configurable;
+
+/**
+ * @author David Withers
+ */
+public interface ColourManager extends Configurable {
+ /**
+ * Builds a Color that has been configured and associated with the given
+ * String (usually an object type).
+ *
+ * @return the associated Color, or if nothing is associated returns
+ * {@link Color#WHITE}.
+ */
+ Color getPreferredColour(String itemKey);
+
+ void setPreferredColour(String itemKey, Color colour);
+}
\ No newline at end of file
http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/52fd79dd/taverna-configuration-api/src/main/java/net/sf/taverna/t2/workbench/configuration/mimetype/MimeTypeManager.java
----------------------------------------------------------------------
diff --git a/taverna-configuration-api/src/main/java/net/sf/taverna/t2/workbench/configuration/mimetype/MimeTypeManager.java b/taverna-configuration-api/src/main/java/net/sf/taverna/t2/workbench/configuration/mimetype/MimeTypeManager.java
new file mode 100644
index 0000000..f0ae0d3
--- /dev/null
+++ b/taverna-configuration-api/src/main/java/net/sf/taverna/t2/workbench/configuration/mimetype/MimeTypeManager.java
@@ -0,0 +1,42 @@
+/*******************************************************************************
+ * Copyright (C) 2007 The University of Manchester
+ *
+ * Modifications to the initial code base are copyright of their
+ * respective authors, or their employers as appropriate.
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU Lesser General Public License
+ * as published by the Free Software Foundation; either version 2.1 of
+ * the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * Lesser General Public License for more details.
+ *
+ * You should have received a copy of the GNU Lesser General Public
+ * License along with this program; if not, write to the Free Software
+ * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
+ ******************************************************************************/
+package net.sf.taverna.t2.workbench.configuration.mimetype;
+
+import java.util.Map;
+
+import uk.org.taverna.configuration.Configurable;
+
+public interface MimeTypeManager extends Configurable {
+ @Override
+ String getCategory();
+
+ @Override
+ Map<String, String> getDefaultPropertyMap();
+
+ @Override
+ String getUUID();
+
+ @Override
+ String getDisplayName();
+
+ @Override
+ String getFilePrefix();
+}
http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/52fd79dd/taverna-configuration-api/src/main/java/net/sf/taverna/t2/workbench/configuration/workbench/WorkbenchConfiguration.java
----------------------------------------------------------------------
diff --git a/taverna-configuration-api/src/main/java/net/sf/taverna/t2/workbench/configuration/workbench/WorkbenchConfiguration.java b/taverna-configuration-api/src/main/java/net/sf/taverna/t2/workbench/configuration/workbench/WorkbenchConfiguration.java
new file mode 100644
index 0000000..461ba5c
--- /dev/null
+++ b/taverna-configuration-api/src/main/java/net/sf/taverna/t2/workbench/configuration/workbench/WorkbenchConfiguration.java
@@ -0,0 +1,44 @@
+/*******************************************************************************
+ * Copyright (C) 2011 The University of Manchester
+ *
+ * Modifications to the initial code base are copyright of their
+ * respective authors, or their employers as appropriate.
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU Lesser General Public License
+ * as published by the Free Software Foundation; either version 2.1 of
+ * the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * Lesser General Public License for more details.
+ *
+ * You should have received a copy of the GNU Lesser General Public
+ * License along with this program; if not, write to the Free Software
+ * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
+ ******************************************************************************/
+package net.sf.taverna.t2.workbench.configuration.workbench;
+
+import uk.org.taverna.configuration.Configurable;
+
+/**
+ * @author David Withers
+ */
+public interface WorkbenchConfiguration extends Configurable {
+ boolean getCaptureConsole();
+
+ void setCaptureConsole(boolean captureConsole);
+
+ boolean getWarnInternalErrors();
+
+ void setWarnInternalErrors(boolean warnInternalErrors);
+
+ int getMaxMenuItems();
+
+ void setMaxMenuItems(int maxMenuItems);
+
+ String getDotLocation();
+
+ void setDotLocation(String dotLocation);
+}
http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/52fd79dd/taverna-configuration-api/src/main/java/net/sf/taverna/t2/workbench/configuration/workbench/ui/T2ConfigurationFrame.java
----------------------------------------------------------------------
diff --git a/taverna-configuration-api/src/main/java/net/sf/taverna/t2/workbench/configuration/workbench/ui/T2ConfigurationFrame.java b/taverna-configuration-api/src/main/java/net/sf/taverna/t2/workbench/configuration/workbench/ui/T2ConfigurationFrame.java
new file mode 100644
index 0000000..577484f
--- /dev/null
+++ b/taverna-configuration-api/src/main/java/net/sf/taverna/t2/workbench/configuration/workbench/ui/T2ConfigurationFrame.java
@@ -0,0 +1,30 @@
+/*******************************************************************************
+ * Copyright (C) 2013 The University of Manchester
+ *
+ * Modifications to the initial code base are copyright of their
+ * respective authors, or their employers as appropriate.
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU Lesser General Public License
+ * as published by the Free Software Foundation; either version 2.1 of
+ * the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * Lesser General Public License for more details.
+ *
+ * You should have received a copy of the GNU Lesser General Public
+ * License along with this program; if not, write to the Free Software
+ * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
+ ******************************************************************************/
+package net.sf.taverna.t2.workbench.configuration.workbench.ui;
+
+/**
+ * @author David Withers
+ */
+public interface T2ConfigurationFrame {
+ void showFrame();
+
+ void showConfiguration(String name);
+}
\ No newline at end of file
http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/52fd79dd/taverna-configuration-impl/pom.xml
----------------------------------------------------------------------
diff --git a/taverna-configuration-impl/pom.xml b/taverna-configuration-impl/pom.xml
new file mode 100644
index 0000000..56b57df
--- /dev/null
+++ b/taverna-configuration-impl/pom.xml
@@ -0,0 +1,76 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!--
+ Licensed to the Apache Software Foundation (ASF) under one or more
+ contributor license agreements. See the NOTICE file distributed with
+ this work for additional information regarding copyright ownership.
+ The ASF licenses this file to You under the Apache License, Version 2.0
+ (the "License"); you may not use this file except in compliance with
+ the License. You may obtain a copy of the License at
+
+ http://www.apache.org/licenses/LICENSE-2.0
+
+ Unless required by applicable law or agreed to in writing, software
+ distributed under the License is distributed on an "AS IS" BASIS,
+ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ See the License for the specific language governing permissions and
+ limitations under the License.
+-->
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+ xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
+ <modelVersion>4.0.0</modelVersion>
+ <parent>
+ <groupId>org.apache.taverna.workbench</groupId>
+ <artifactId>taverna-workbench</artifactId>
+ <version>3.1.0-incubating-SNAPSHOT</version>
+ </parent>
+ <artifactId>taverna-configuration-ui-impl</artifactId>
+ <packaging>bundle</packaging>
+ <name>Apache Taverna Configuration Management UI Impl</name>
+ <dependencies>
+ <dependency>
+ <groupId>${project.parent.groupId}</groupId>
+ <artifactId>taverna-menu-api</artifactId>
+ <version>${project.parent.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>${project.parent.groupId}</groupId>
+ <artifactId>taverna-helper-api</artifactId>
+ <version>${project.parent.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>${project.parent.groupId}</groupId>
+ <artifactId>taverna-configuration-ui-api</artifactId>
+ <version>${project.parent.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.taverna.osgi</groupId>
+ <artifactId>taverna-configuration-api</artifactId>
+ <version>${taverna.osgi.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.taverna.osgi</groupId>
+ <artifactId>taverna-app-configuration-api</artifactId>
+ <version>${taverna.osgi.version}</version>
+ </dependency>
+
+ <dependency>
+ <groupId>junit</groupId>
+ <artifactId>junit</artifactId>
+ <version>${junit.version}</version>
+ <scope>test</scope>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.taverna.osgi</groupId>
+ <artifactId>taverna-configuration-impl</artifactId>
+ <version>${taverna.osgi.version}</version>
+ <scope>test</scope>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.taverna.osgi</groupId>
+ <artifactId>taverna-app-configuration-impl</artifactId>
+ <version>${taverna.osgi.version}</version>
+ <scope>test</scope>
+ </dependency>
+ </dependencies>
+
+</project>
http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/52fd79dd/taverna-configuration-impl/src/main/java/net/sf/taverna/t2/workbench/ui/impl/configuration/WorkbenchConfigurationImpl.java
----------------------------------------------------------------------
diff --git a/taverna-configuration-impl/src/main/java/net/sf/taverna/t2/workbench/ui/impl/configuration/WorkbenchConfigurationImpl.java b/taverna-configuration-impl/src/main/java/net/sf/taverna/t2/workbench/ui/impl/configuration/WorkbenchConfigurationImpl.java
new file mode 100644
index 0000000..0e63a4a
--- /dev/null
+++ b/taverna-configuration-impl/src/main/java/net/sf/taverna/t2/workbench/ui/impl/configuration/WorkbenchConfigurationImpl.java
@@ -0,0 +1,210 @@
+/*******************************************************************************
+ * Copyright (C) 2007 The University of Manchester
+ *
+ * Modifications to the initial code base are copyright of their
+ * respective authors, or their employers as appropriate.
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU Lesser General Public License
+ * as published by the Free Software Foundation; either version 2.1 of
+ * the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * Lesser General Public License for more details.
+ *
+ * You should have received a copy of the GNU Lesser General Public
+ * License along with this program; if not, write to the Free Software
+ * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
+ ******************************************************************************/
+package net.sf.taverna.t2.workbench.ui.impl.configuration;
+
+import java.io.File;
+import java.util.HashMap;
+import java.util.Map;
+
+import net.sf.taverna.t2.workbench.configuration.workbench.WorkbenchConfiguration;
+
+import org.apache.log4j.Logger;
+
+import uk.org.taverna.configuration.AbstractConfigurable;
+import uk.org.taverna.configuration.ConfigurationManager;
+import uk.org.taverna.configuration.app.ApplicationConfiguration;
+
+/**
+ * An implementation of Configurable for general Workbench configuration
+ * properties
+ *
+ * @author Stuart Owen
+ * @author Stian Soiland-Reyes
+ */
+public class WorkbenchConfigurationImpl extends AbstractConfigurable implements
+ WorkbenchConfiguration {
+ private static Logger logger = Logger
+ .getLogger(WorkbenchConfiguration.class);
+ private static final int DEFAULT_MAX_MENU_ITEMS = 20;
+ public static final String TAVERNA_DOTLOCATION = "taverna.dotlocation";
+ public static final String MAX_MENU_ITEMS = "taverna.maxmenuitems";
+ public static final String WARN_INTERNAL_ERRORS = "taverna.warninternal";
+ public static final String CAPTURE_CONSOLE = "taverna.captureconsole";
+ private static final String BIN = "bin";
+ private static final String BUNDLE_CONTENTS = "Contents";
+ private static final String BUNDLE_MAC_OS = "MacOS";
+ private static final String DOT_EXE = "dot.exe";
+ private static final String DOT_FALLBACK = "dot";
+ public static String uuid = "c14856f0-5967-11dd-ae16-0800200c9a66";
+ private static final String MAC_OS_X = "Mac OS X";
+ private static final String WIN32I386 = "win32i386";
+ private static final String WINDOWS = "Windows";
+
+ private ApplicationConfiguration applicationConfiguration;
+
+ /**
+ * Constructs a new <code>WorkbenchConfigurationImpl</code>.
+ *
+ * @param configurationManager
+ */
+ public WorkbenchConfigurationImpl(ConfigurationManager configurationManager) {
+ super(configurationManager);
+ }
+
+ Map<String, String> defaultWorkbenchProperties = null;
+ Map<String, String> workbenchProperties = new HashMap<String, String>();
+
+ @Override
+ public String getCategory() {
+ return "general";
+ }
+
+ @Override
+ public Map<String, String> getDefaultPropertyMap() {
+ if (defaultWorkbenchProperties == null) {
+ defaultWorkbenchProperties = new HashMap<>();
+ String dotLocation = System.getProperty(TAVERNA_DOTLOCATION) != null ? System
+ .getProperty(TAVERNA_DOTLOCATION) : getDefaultDotLocation();
+ if (dotLocation != null)
+ defaultWorkbenchProperties
+ .put(TAVERNA_DOTLOCATION, dotLocation);
+ defaultWorkbenchProperties.put(MAX_MENU_ITEMS,
+ Integer.toString(DEFAULT_MAX_MENU_ITEMS));
+ defaultWorkbenchProperties.put(WARN_INTERNAL_ERRORS,
+ Boolean.FALSE.toString());
+ defaultWorkbenchProperties.put(CAPTURE_CONSOLE,
+ Boolean.TRUE.toString());
+ }
+ return defaultWorkbenchProperties;
+ }
+
+ @Override
+ public String getDisplayName() {
+ return "Workbench";
+ }
+
+ @Override
+ public String getFilePrefix() {
+ return "Workbench";
+ }
+
+ @Override
+ public String getUUID() {
+ return uuid;
+ }
+
+ @Override
+ public boolean getWarnInternalErrors() {
+ String property = getProperty(WARN_INTERNAL_ERRORS);
+ return Boolean.parseBoolean(property);
+ }
+
+ @Override
+ public boolean getCaptureConsole() {
+ String property = getProperty(CAPTURE_CONSOLE);
+ return Boolean.parseBoolean(property);
+ }
+
+ @Override
+ public void setWarnInternalErrors(boolean warnInternalErrors) {
+ setProperty(WARN_INTERNAL_ERRORS, Boolean.toString(warnInternalErrors));
+ }
+
+ @Override
+ public void setCaptureConsole(boolean captureConsole) {
+ setProperty(CAPTURE_CONSOLE, Boolean.toString(captureConsole));
+ }
+
+ @Override
+ public void setMaxMenuItems(int maxMenuItems) {
+ if (maxMenuItems < 2)
+ throw new IllegalArgumentException(
+ "Maximum menu items must be at least 2");
+ setProperty(MAX_MENU_ITEMS, Integer.toString(maxMenuItems));
+ }
+
+ @Override
+ public int getMaxMenuItems() {
+ String property = getProperty(MAX_MENU_ITEMS);
+ try {
+ int maxMenuItems = Integer.parseInt(property);
+ if (maxMenuItems >= 2)
+ return maxMenuItems;
+ logger.warn(MAX_MENU_ITEMS + " can't be less than 2");
+ } catch (NumberFormatException ex) {
+ logger.warn("Invalid number for " + MAX_MENU_ITEMS + ": "
+ + property);
+ }
+ // We'll return the default instead
+ return DEFAULT_MAX_MENU_ITEMS;
+ }
+
+ @Override
+ public String getDotLocation() {
+ return getProperty(TAVERNA_DOTLOCATION);
+ }
+
+ @Override
+ public void setDotLocation(String dotLocation) {
+ setProperty(TAVERNA_DOTLOCATION, dotLocation);
+ }
+
+ private String getDefaultDotLocation() {
+ if (applicationConfiguration == null)
+ return null;
+ File startupDir = applicationConfiguration.getStartupDir();
+ if (startupDir == null)
+ return DOT_FALLBACK;
+
+ String os = System.getProperty("os.name");
+ if (os.equals(MAC_OS_X))
+ if (startupDir.getParentFile() != null) {
+ File contentsDir = startupDir.getParentFile().getParentFile();
+ if (contentsDir != null
+ && contentsDir.getName().equalsIgnoreCase(
+ BUNDLE_CONTENTS)) {
+ File dot = new File(new File(contentsDir, BUNDLE_MAC_OS),
+ DOT_FALLBACK);
+ if (dot.exists())
+ return dot.getAbsolutePath();
+ }
+ } else if (os.startsWith(WINDOWS)) {
+ File binWin386Dir = new File(new File(startupDir, BIN),
+ WIN32I386);
+ File dot = new File(binWin386Dir, DOT_EXE);
+ if (dot.exists())
+ return dot.getAbsolutePath();
+ }
+ return DOT_FALLBACK;
+ }
+
+ /**
+ * Sets the applicationConfiguration.
+ *
+ * @param applicationConfiguration
+ * the new value of applicationConfiguration
+ */
+ public void setApplicationConfiguration(
+ ApplicationConfiguration applicationConfiguration) {
+ this.applicationConfiguration = applicationConfiguration;
+ defaultWorkbenchProperties = null;
+ }
+}
http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/52fd79dd/taverna-configuration-impl/src/main/java/net/sf/taverna/t2/workbench/ui/impl/configuration/WorkbenchConfigurationPanel.java
----------------------------------------------------------------------
diff --git a/taverna-configuration-impl/src/main/java/net/sf/taverna/t2/workbench/ui/impl/configuration/WorkbenchConfigurationPanel.java b/taverna-configuration-impl/src/main/java/net/sf/taverna/t2/workbench/ui/impl/configuration/WorkbenchConfigurationPanel.java
new file mode 100644
index 0000000..ecddc35
--- /dev/null
+++ b/taverna-configuration-impl/src/main/java/net/sf/taverna/t2/workbench/ui/impl/configuration/WorkbenchConfigurationPanel.java
@@ -0,0 +1,266 @@
+/*******************************************************************************
+ * Copyright (C) 2007 The University of Manchester
+ *
+ * Modifications to the initial code base are copyright of their
+ * respective authors, or their employers as appropriate.
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU Lesser General Public License
+ * as published by the Free Software Foundation; either version 2.1 of
+ * the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * Lesser General Public License for more details.
+ *
+ * You should have received a copy of the GNU Lesser General Public
+ * License along with this program; if not, write to the Free Software
+ * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
+ ******************************************************************************/
+package net.sf.taverna.t2.workbench.ui.impl.configuration;
+
+import static java.awt.GridBagConstraints.*;
+import static javax.swing.JFileChooser.APPROVE_OPTION;
+import static javax.swing.JOptionPane.INFORMATION_MESSAGE;
+import static javax.swing.JOptionPane.WARNING_MESSAGE;
+import static javax.swing.JOptionPane.showMessageDialog;
+import static net.sf.taverna.t2.workbench.helper.Helper.showHelp;
+import static net.sf.taverna.t2.workbench.icons.WorkbenchIcons.openIcon;
+
+import java.awt.Component;
+import java.awt.FlowLayout;
+import java.awt.GridBagConstraints;
+import java.awt.GridBagLayout;
+import java.awt.Insets;
+import java.awt.event.ActionEvent;
+
+import javax.swing.AbstractAction;
+import javax.swing.JButton;
+import javax.swing.JCheckBox;
+import javax.swing.JFileChooser;
+import javax.swing.JLabel;
+import javax.swing.JPanel;
+import javax.swing.JTextArea;
+import javax.swing.JTextField;
+import javax.swing.border.EmptyBorder;
+
+import net.sf.taverna.t2.workbench.configuration.workbench.WorkbenchConfiguration;
+
+import org.apache.log4j.Logger;
+
+@SuppressWarnings("serial")
+public class WorkbenchConfigurationPanel extends JPanel {
+ private static final String RESTART_MSG = "For the new configuration to be fully applied, it is advised to restart Taverna.";
+ private static final String DOT_PATH_MSG = "Path to Graphviz executable <code>dot</code>:";
+ private static final String CONTEXT_MENU_SIZE_MSG = "Maximum number of services/ports in right-click menu:";
+ private static Logger logger = Logger
+ .getLogger(WorkbenchConfigurationUIFactory.class);
+
+ private JTextField dotLocation = new JTextField(25);
+ private JTextField menuItems = new JTextField(10);
+ private JCheckBox warnInternal = new JCheckBox("Warn on internal errors");
+ private JCheckBox captureConsole = new JCheckBox(
+ "Capture output on stdout/stderr to log file");
+
+ private final WorkbenchConfiguration workbenchConfiguration;
+
+ public WorkbenchConfigurationPanel(
+ WorkbenchConfiguration workbenchConfiguration) {
+ super();
+ this.workbenchConfiguration = workbenchConfiguration;
+ initComponents();
+ }
+
+ private static JLabel htmlLabel(String html) {
+ return new JLabel("<html><body>" + html + "</body></html>");
+ }
+
+ private void initComponents() {
+ this.setLayout(new GridBagLayout());
+ GridBagConstraints gbc = new GridBagConstraints();
+
+ // Title describing what kind of settings we are configuring here
+ JTextArea descriptionText = new JTextArea(
+ "General Workbench configuration");
+ descriptionText.setLineWrap(true);
+ descriptionText.setWrapStyleWord(true);
+ descriptionText.setEditable(false);
+ descriptionText.setFocusable(false);
+ descriptionText.setBorder(new EmptyBorder(10, 10, 10, 10));
+ gbc.anchor = WEST;
+ gbc.gridx = 0;
+ gbc.gridy = 0;
+ gbc.gridwidth = 2;
+ gbc.weightx = 1.0;
+ gbc.weighty = 0.0;
+ gbc.fill = HORIZONTAL;
+ this.add(descriptionText, gbc);
+
+ gbc.gridx = 0;
+ gbc.gridy = 1;
+ gbc.gridwidth = 2;
+ gbc.weightx = 0.0;
+ gbc.weighty = 0.0;
+ gbc.insets = new Insets(10, 5, 0, 0);
+ gbc.fill = NONE;
+ this.add(htmlLabel(DOT_PATH_MSG), gbc);
+
+ dotLocation.setText(workbenchConfiguration.getDotLocation());
+ gbc.gridy++;
+ gbc.gridwidth = 1;
+ gbc.weightx = 1.0;
+ gbc.insets = new Insets(0, 0, 0, 0);
+ gbc.fill = HORIZONTAL;
+ this.add(dotLocation, gbc);
+
+ JButton browseButton = new JButton();
+ gbc.gridx = 1;
+ gbc.weightx = 0.0;
+ gbc.fill = NONE;
+ this.add(browseButton, gbc);
+ browseButton.setAction(new AbstractAction() {
+ @Override
+ public void actionPerformed(ActionEvent e) {
+ System.setProperty("com.apple.macos.use-file-dialog-packages",
+ "false");
+ JFileChooser fileChooser = new JFileChooser();
+ fileChooser.putClientProperty(
+ "JFileChooser.appBundleIsTraversable", "always");
+ fileChooser.putClientProperty(
+ "JFileChooser.packageIsTraversable", "always");
+
+ fileChooser.setDialogTitle("Browse for dot");
+
+ fileChooser.resetChoosableFileFilters();
+ fileChooser.setAcceptAllFileFilterUsed(false);
+
+ fileChooser.setMultiSelectionEnabled(false);
+
+ int returnVal = fileChooser
+ .showOpenDialog(WorkbenchConfigurationPanel.this);
+ if (returnVal == APPROVE_OPTION)
+ dotLocation.setText(fileChooser.getSelectedFile()
+ .getAbsolutePath());
+ }
+ });
+ browseButton.setIcon(openIcon);
+
+ gbc.gridx = 0;
+ gbc.gridy++;
+ gbc.gridwidth = 2;
+ gbc.weightx = 0.0;
+ gbc.weighty = 0.0;
+ gbc.insets = new Insets(10, 5, 0, 0);
+ gbc.fill = HORIZONTAL;
+ this.add(htmlLabel(CONTEXT_MENU_SIZE_MSG), gbc);
+
+ menuItems.setText(Integer.toString(workbenchConfiguration
+ .getMaxMenuItems()));
+ gbc.gridy++;
+ gbc.weightx = 1.0;
+ gbc.gridwidth = 1;
+ gbc.insets = new Insets(0, 0, 0, 0);
+ gbc.fill = HORIZONTAL;
+ this.add(menuItems, gbc);
+
+ gbc.gridx = 0;
+ gbc.gridy++;
+ gbc.gridwidth = 2;
+ gbc.weightx = 1.0;
+ gbc.fill = HORIZONTAL;
+ gbc.insets = new Insets(10, 0, 0, 0);
+ warnInternal
+ .setSelected(workbenchConfiguration.getWarnInternalErrors());
+ this.add(warnInternal, gbc);
+
+ gbc.gridy++;
+ gbc.insets = new Insets(0, 0, 10, 0);
+ captureConsole.setSelected(workbenchConfiguration.getCaptureConsole());
+ this.add(captureConsole, gbc);
+
+ // Add the buttons panel
+ gbc.gridx = 0;
+ gbc.gridy++;
+ gbc.gridwidth = 3;
+ gbc.weightx = 1.0;
+ gbc.weighty = 1.0;
+ gbc.fill = BOTH;
+ gbc.anchor = SOUTH;
+ this.add(getButtonsPanel(), gbc);
+ }
+
+ private Component getButtonsPanel() {
+ final JPanel panel = new JPanel();
+ panel.setLayout(new FlowLayout(FlowLayout.CENTER));
+
+ /**
+ * The helpButton shows help about the current component
+ */
+ JButton helpButton = new JButton(new AbstractAction("Help") {
+ @Override
+ public void actionPerformed(ActionEvent arg0) {
+ showHelp(panel);
+ }
+ });
+ panel.add(helpButton);
+
+ /**
+ * The resetButton changes the property values shown to those
+ * corresponding to the configuration currently applied.
+ */
+ JButton resetButton = new JButton(new AbstractAction("Reset") {
+ @Override
+ public void actionPerformed(ActionEvent arg0) {
+ resetFields();
+ }
+ });
+ panel.add(resetButton);
+
+ JButton applyButton = new JButton(new AbstractAction("Apply") {
+ @Override
+ public void actionPerformed(ActionEvent arg0) {
+ String menus = menuItems.getText();
+ try {
+ workbenchConfiguration.setMaxMenuItems(Integer
+ .valueOf(menus));
+ } catch (IllegalArgumentException e) {
+ String message = "Invalid menu items number " + menus
+ + ":\n" + e.getLocalizedMessage();
+ showMessageDialog(panel, message, "Invalid menu items",
+ WARNING_MESSAGE);
+ return;
+ }
+
+ workbenchConfiguration.setCaptureConsole(captureConsole
+ .isSelected());
+ workbenchConfiguration.setWarnInternalErrors(warnInternal
+ .isSelected());
+ workbenchConfiguration.setDotLocation(dotLocation.getText());
+ try {
+ showMessageDialog(panel, RESTART_MSG, "Restart adviced",
+ INFORMATION_MESSAGE);
+ } catch (Exception e) {
+ logger.error("Error storing updated configuration", e);
+ }
+ }
+ });
+ panel.add(applyButton);
+ return panel;
+ }
+
+ /**
+ * Resets the shown field values to those currently set (last saved) in the
+ * configuration.
+ *
+ * @param configurable
+ */
+ private void resetFields() {
+ menuItems.setText(Integer.toString(workbenchConfiguration
+ .getMaxMenuItems()));
+ dotLocation.setText(workbenchConfiguration.getDotLocation());
+ warnInternal
+ .setSelected(workbenchConfiguration.getWarnInternalErrors());
+ captureConsole.setSelected(workbenchConfiguration.getCaptureConsole());
+ }
+}
http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/52fd79dd/taverna-configuration-impl/src/main/java/net/sf/taverna/t2/workbench/ui/impl/configuration/WorkbenchConfigurationUIFactory.java
----------------------------------------------------------------------
diff --git a/taverna-configuration-impl/src/main/java/net/sf/taverna/t2/workbench/ui/impl/configuration/WorkbenchConfigurationUIFactory.java b/taverna-configuration-impl/src/main/java/net/sf/taverna/t2/workbench/ui/impl/configuration/WorkbenchConfigurationUIFactory.java
new file mode 100644
index 0000000..263233f
--- /dev/null
+++ b/taverna-configuration-impl/src/main/java/net/sf/taverna/t2/workbench/ui/impl/configuration/WorkbenchConfigurationUIFactory.java
@@ -0,0 +1,52 @@
+/*******************************************************************************
+ * Copyright (C) 2007 The University of Manchester
+ *
+ * Modifications to the initial code base are copyright of their
+ * respective authors, or their employers as appropriate.
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU Lesser General Public License
+ * as published by the Free Software Foundation; either version 2.1 of
+ * the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * Lesser General Public License for more details.
+ *
+ * You should have received a copy of the GNU Lesser General Public
+ * License along with this program; if not, write to the Free Software
+ * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
+ ******************************************************************************/
+package net.sf.taverna.t2.workbench.ui.impl.configuration;
+
+import javax.swing.JPanel;
+
+import uk.org.taverna.configuration.Configurable;
+import uk.org.taverna.configuration.ConfigurationUIFactory;
+
+import net.sf.taverna.t2.workbench.configuration.workbench.WorkbenchConfiguration;
+
+public class WorkbenchConfigurationUIFactory implements ConfigurationUIFactory {
+ private WorkbenchConfiguration workbenchConfiguration;
+
+ @Override
+ public boolean canHandle(String uuid) {
+ return uuid.equals(workbenchConfiguration.getUUID());
+ }
+
+ @Override
+ public JPanel getConfigurationPanel() {
+ return new WorkbenchConfigurationPanel(workbenchConfiguration);
+ }
+
+ @Override
+ public Configurable getConfigurable() {
+ return workbenchConfiguration;
+ }
+
+ public void setWorkbenchConfiguration(
+ WorkbenchConfiguration workbenchConfiguration) {
+ this.workbenchConfiguration = workbenchConfiguration;
+ }
+}