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Posted to commits@isis.apache.org by da...@apache.org on 2015/03/30 17:44:18 UTC

[49/59] [abbrv] isis git commit: ISIS-789: removing neoapp example after all

http://git-wip-us.apache.org/repos/asf/isis/blob/9679840c/example/application/neoapp/webapp/src/main/webapp/scripts/alchemy/alchemy.js
----------------------------------------------------------------------
diff --git a/example/application/neoapp/webapp/src/main/webapp/scripts/alchemy/alchemy.js b/example/application/neoapp/webapp/src/main/webapp/scripts/alchemy/alchemy.js
deleted file mode 100644
index b09e097..0000000
--- a/example/application/neoapp/webapp/src/main/webapp/scripts/alchemy/alchemy.js
+++ /dev/null
@@ -1,3153 +0,0 @@
-(function() {
-  "Alchemy.js is a graph drawing application for the web.\nCopyright (C) 2014  GraphAlchemist, Inc.\n\nThis program is free software: you can redistribute it and/or modify\nit under the terms of the GNU Affero General Public License as published by\nthe Free Software Foundation, either version 3 of the License, or\n(at your option) any later version.\n\nThis program is distributed in the hope that it will be useful,\nbut WITHOUT ANY WARRANTY; without even the implied warranty of\nMERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the\nGNU Affero General Public License for more details.\n\nYou should have received a copy of the GNU Affero General Public License\nalong with this program.  If not, see <http://www.gnu.org/licenses/>.\nlets";
-  var Alchemy, Clustering, DrawEdge, DrawEdges, DrawNode, DrawNodes, Editor, EditorInteractions, EditorUtils, Layout, root, warnings,
-    __slice = [].slice,
-    __bind = function(fn, me){ return function(){ return fn.apply(me, arguments); }; };
-
-  Alchemy = (function() {
-    function Alchemy(userConf) {
-      if (userConf == null) {
-        userConf = null;
-      }
-      this.a = this;
-      this.version = "0.4.1";
-      this.get = new this.Get(this);
-      this.remove = new this.Remove(this);
-      this.create = new this.Create(this);
-      this.set = new this.Set(this);
-      this.drawing = {
-        DrawEdge: DrawEdge(this),
-        DrawEdges: DrawEdges(this),
-        DrawNode: DrawNode(this),
-        DrawNodes: DrawNodes(this),
-        EdgeUtils: this.EdgeUtils(this),
-        NodeUtils: this.NodeUtils(this)
-      };
-      this.controlDash = this.controlDash(this);
-      this.stats = this.stats(this);
-      this.layout = Layout;
-      this.clustering = Clustering;
-      this.models = {
-        Node: this.Node(this),
-        Edge: this.Edge(this)
-      };
-      this.utils = {
-        warnings: new warnings(this)
-      };
-      this.filters = this.filters(this);
-      this.exports = this.exports(this);
-      this.visControls = {};
-      this.styles = {};
-      this.editor = {};
-      this.log = {};
-      this.state = {
-        "interactions": "default",
-        "layout": "default"
-      };
-      this.startGraph = this.startGraph(this);
-      this.updateGraph = this.updateGraph(this);
-      this.generateLayout = this.generateLayout(this);
-      this.svgStyles = this.svgStyles(this);
-      this.interactions = this.interactions(this);
-      this.search = this.search(this);
-      this.plugins = this.plugins(this);
-      this._nodes = {};
-      this._edges = {};
-      this.getNodes = this.get.getNodes;
-      this.getEdges = this.get.getEdges;
-      this.allNodes = this.get.allNodes;
-      this.allEdges = this.get.allEdges;
-      if (userConf) {
-        this.begin(userConf);
-      }
-    }
-
-    Alchemy.prototype.begin = function(userConf) {
-      var conf;
-      conf = this.setConf(userConf);
-      switch (typeof this.conf.dataSource) {
-        case 'string':
-          d3.json(this.a.conf.dataSource, this.a.startGraph);
-          break;
-        case 'object':
-          this.a.startGraph(this.a.conf.dataSource);
-      }
-      this.plugins.init();
-      Alchemy.prototype.instances.push(this);
-      return this;
-    };
-
-    Alchemy.prototype.setConf = function(userConf) {
-      var key, val;
-      if (userConf.theme != null) {
-        userConf = _.merge(_.cloneDeep(this.defaults), this.a.themes["" + userConf.theme]);
-      }
-      for (key in userConf) {
-        val = userConf[key];
-        switch (key) {
-          case "clusterColors":
-            userConf["clusterColours"] = val;
-            break;
-          case "backgroundColor":
-            userConf["backgroundColour"] = val;
-            break;
-          case "nodeColor":
-            userConf[nodeColour] = val;
-        }
-      }
-      return this.a.conf = _.merge(_.cloneDeep(this.defaults), userConf);
-    };
-
-    Alchemy.prototype.instances = [];
-
-    Alchemy.prototype.getInst = function(svg) {
-      var instNumber;
-      instNumber = parseInt(d3.select(svg).attr("alchInst"));
-      return Alchemy.prototype.instances[instNumber];
-    };
-
-    return Alchemy;
-
-  })();
-
-  root = typeof exports !== "undefined" && exports !== null ? exports : this;
-
-  root.Alchemy = Alchemy;
-
-  root.alchemy = {
-    begin: function(config) {
-      return root.alchemy = new Alchemy(config);
-    }
-  };
-
-  Alchemy.prototype.Create = (function() {
-    function Create(instance) {
-      this.a = instance;
-    }
-
-    Create.prototype.nodes = function() {
-      var a, n, nodeMap, nodeMaps, registerNode, _i, _len;
-      nodeMap = arguments[0], nodeMaps = 2 <= arguments.length ? __slice.call(arguments, 1) : [];
-      a = this.a;
-      registerNode = function(node) {
-        var aNode;
-        if (!a._nodes[node.id]) {
-          aNode = new a.models.Node(node);
-          a._nodes[node.id] = aNode;
-          return [aNode];
-        } else {
-          return console.warn("A node with the id " + node.id + " already exists.\nConsider using the @a.get.nodes() method to \nretrieve the node and then using the Node methods.");
-        }
-      };
-      nodeMaps = _.union(nodeMaps, nodeMap);
-      for (_i = 0, _len = nodeMaps.length; _i < _len; _i++) {
-        n = nodeMaps[_i];
-        registerNode(n);
-      }
-      if (this.a.initial) {
-        return this.a.updateGraph();
-      }
-    };
-
-    Create.prototype.edges = function() {
-      var a, allEdges, edgeMap, edgeMaps, registerEdge;
-      edgeMap = arguments[0], edgeMaps = 2 <= arguments.length ? __slice.call(arguments, 1) : [];
-      a = this.a;
-      registerEdge = function(edge) {
-        var aEdge, edgeArray;
-        if (edge.id && !a._edges[edge.id]) {
-          aEdge = new a.models.Edge(edge);
-          a._edges[edge.id] = [aEdge];
-          return [aEdge];
-        } else if (edge.id && a._edges[edge.id]) {
-          return console.warn("An edge with that id " + someEdgeMap.id + " already exists.\nConsider using the @a.get.edge() method to \nretrieve the edge and then using the Edge methods.\nNote: id's are not required for edges.  Alchemy will create\nan unlimited number of edges for the same source and target node.\nSimply omit 'id' when creating the edge.");
-        } else {
-          edgeArray = a._edges["" + edge.source + "-" + edge.target];
-          if (edgeArray) {
-            aEdge = new a.models.Edge(edge, edgeArray.length);
-            edgeArray.push(aEdge);
-            return [aEdge];
-          } else {
-            aEdge = new a.models.Edge(edge, 0);
-            a._edges["" + edge.source + "-" + edge.target] = [aEdge];
-            return [aEdge];
-          }
-        }
-      };
-      allEdges = _.uniq(_.flatten(arguments));
-      _.each(allEdges, function(e) {
-        return registerEdge(e);
-      });
-      if (this.a.initial) {
-        return this.a.updateGraph();
-      }
-    };
-
-    return Create;
-
-  })();
-
-  Alchemy.prototype.Get = function(instance) {
-    return {
-      a: instance,
-      _el: [],
-      _elType: null,
-      _makeChain: function(inp) {
-        var returnedGet;
-        returnedGet = this;
-        returnedGet.__proto__ = [].__proto__;
-        while (returnedGet.length) {
-          returnedGet.pop();
-        }
-        _.each(inp, function(e) {
-          return returnedGet.push(e);
-        });
-        return returnedGet;
-      },
-      nodes: function() {
-        var a, allIDs, id, ids, nodeList;
-        id = arguments[0], ids = 2 <= arguments.length ? __slice.call(arguments, 1) : [];
-        if (id != null) {
-          allIDs = _.map(arguments, function(arg) {
-            return String(arg);
-          });
-          a = this.a;
-          nodeList = (function(a) {
-            return _.filter(a._nodes, function(val, key) {
-              if (_.contains(allIDs, key)) {
-                return val;
-              }
-            });
-          })(a);
-        }
-        this._elType = "node";
-        this._el = nodeList;
-        return this._makeChain(nodeList);
-      },
-      edges: function() {
-        var a, allIDs, edgeList, id, ids;
-        id = arguments[0], ids = 2 <= arguments.length ? __slice.call(arguments, 1) : [];
-        if (id != null) {
-          allIDs = _.map(arguments, function(arg) {
-            return String(arg);
-          });
-          a = this.a;
-          edgeList = (function(a) {
-            return _.flatten(_.filter(a._edges, function(val, key) {
-              if (_.contains(allIDs, key)) {
-                return val;
-              }
-            }));
-          })(a);
-        }
-        this._elType = "edge";
-        this._el = edgeList;
-        return this._makeChain(edgeList);
-      },
-      all: function() {
-        var a, elType;
-        a = this.a;
-        elType = this._elType;
-        this._el = (function(elType) {
-          switch (elType) {
-            case "node":
-              return a.elements.nodes.val;
-            case "edge":
-              return a.elements.edges.flat;
-          }
-        })(elType);
-        return this._makeChain(this._el);
-      },
-      elState: function(state) {
-        var elList;
-        elList = _.filter(this._el, function(e) {
-          return e._state === state;
-        });
-        this._el = elList;
-        return this._makeChain(elList);
-      },
-      state: function(key) {
-        if (this.a.state.key != null) {
-          return this.a.state.key;
-        }
-      },
-      type: function(type) {
-        var elList;
-        elList = _.filter(this._el, function(e) {
-          return e._nodeType === type || e._edgeType === type;
-        });
-        this._el = elList;
-        return this._makeChain(elList);
-      },
-      activeNodes: function() {
-        return _.filter(this.a._nodes, function(node) {
-          if (node._state === "active") {
-            return node;
-          }
-        });
-      },
-      activeEdges: function() {
-        return _.filter(this.a.get.allEdges(), function(edge) {
-          if (edge._state === "active") {
-            return edge;
-          }
-        });
-      },
-      state: function(key) {
-        if (this.a.state.key != null) {
-          return this.a.state.key;
-        }
-      },
-      clusters: function() {
-        var clusterMap, nodesByCluster;
-        clusterMap = this.a.layout._clustering.clusterMap;
-        nodesByCluster = {};
-        _.each(clusterMap, function(key, value) {
-          return nodesByCluster[value] = _.select(this.a.get.allNodes(), function(node) {
-            return node.getProperties()[this.a.conf.clusterKey] === value;
-          });
-        });
-        return nodesByCluster;
-      },
-      clusterColours: function() {
-        var clusterColoursObject, clusterMap;
-        clusterMap = this.a.layout._clustering.clusterMap;
-        clusterColoursObject = {};
-        _.each(clusterMap, function(key, value) {
-          return clusterColoursObject[value] = this.a.conf.clusterColours[key % this.a.conf.clusterColours.length];
-        });
-        return clusterColoursObject;
-      },
-      allEdges: function() {
-        return this.a.elements.nodes.flat;
-      },
-      allNodes: function(type) {
-        if (type != null) {
-          return _.filter(this.a._nodes, function(n) {
-            if (n._nodeType === type) {
-              return n;
-            }
-          });
-        } else {
-          return this.a.elements.nodes.val;
-        }
-      },
-      getNodes: function() {
-        var a, id, ids;
-        id = arguments[0], ids = 2 <= arguments.length ? __slice.call(arguments, 1) : [];
-        a = this.a;
-        ids.push(id);
-        return _.map(ids, function(id) {
-          return a._nodes[id];
-        });
-      },
-      getEdges: function(id, target) {
-        var a, edge_id;
-        if (id == null) {
-          id = null;
-        }
-        if (target == null) {
-          target = null;
-        }
-        a = this.a;
-        if ((id != null) && (target != null)) {
-          edge_id = "" + id + "-" + target;
-          return this.a._edges[edge_id];
-        } else if ((id != null) && (target == null)) {
-          return this.a._nodes[id]._adjacentEdges;
-        }
-      }
-    };
-  };
-
-  Alchemy.prototype.Remove = (function() {
-    function Remove(instance) {
-      this.a = instance;
-    }
-
-    Remove.prototype.nodes = function(nodeMap) {
-      return _.each(nodeMap, function(n) {
-        if (n._nodeType != null) {
-          return n.remove();
-        }
-      });
-    };
-
-    Remove.prototype.edges = function(edgeMap) {
-      return _.each(edgeMap, function(e) {
-        if (e._edgeType != null) {
-          return e.remove();
-        }
-      });
-    };
-
-    return Remove;
-
-  })();
-
-  Alchemy.prototype.Set = function(instance) {
-    return {
-      a: instance,
-      state: function(key, value) {
-        return this.a.state.key = value;
-      }
-    };
-  };
-
-  Clustering = (function() {
-    function Clustering(instance) {
-      var clustering, conf, nodes, _charge, _friction, _gravity, _linkDistancefn, _linkStrength;
-      this.a = instance;
-      nodes = this.a._nodes;
-      conf = this.a.conf;
-      clustering = this;
-      this.clusterKey = conf.clusterKey;
-      this.identifyClusters(this.a);
-      _charge = -500;
-      _linkStrength = function(edge) {
-        var sourceCluster, targetCluster;
-        sourceCluster = nodes[edge.source.id]._properties[this.clusterKey];
-        targetCluster = nodes[edge.target.id]._properties[this.clusterKey];
-        if (sourceCluster === targetCluster) {
-          return 0.15;
-        } else {
-          return 0;
-        }
-      };
-      _friction = function() {
-        return 0.7;
-      };
-      _linkDistancefn = function(edge) {
-        nodes = edge.self.a._nodes;
-        if (nodes[edge.source.id]._properties.root || nodes[edge.target.id]._properties.root) {
-          return 300;
-        } else if (nodes[edge.source.id]._properties[this.clusterKey] === nodes[edge.target.id]._properties[this.clusterKey]) {
-          return 10;
-        } else {
-          return 600;
-        }
-      };
-      _gravity = function(k) {
-        return 8 * k;
-      };
-      this.layout = {
-        charge: _charge,
-        linkStrength: function(edge) {
-          return _linkStrength(edge);
-        },
-        friction: function() {
-          return _friction();
-        },
-        linkDistancefn: function(edge) {
-          return _linkDistancefn(edge);
-        },
-        gravity: function(k) {
-          return _gravity(k);
-        }
-      };
-    }
-
-    Clustering.prototype.identifyClusters = function(a) {
-      var clusters, nodes, _i, _ref, _results;
-      nodes = a.elements.nodes.val;
-      clusters = _.uniq(_.map(nodes, function(node) {
-        return node.getProperties()[a.conf.clusterKey];
-      }));
-      return this.clusterMap = _.zipObject(clusters, (function() {
-        _results = [];
-        for (var _i = 0, _ref = clusters.length; 0 <= _ref ? _i <= _ref : _i >= _ref; 0 <= _ref ? _i++ : _i--){ _results.push(_i); }
-        return _results;
-      }).apply(this));
-    };
-
-    Clustering.prototype.getClusterColour = function(clusterValue) {
-      var index;
-      index = this.clusterMap[clusterValue] % this.a.conf.clusterColours.length;
-      return this.a.conf.clusterColours[index];
-    };
-
-    Clustering.prototype.edgeGradient = function(edges) {
-      var Q, defs, edge, endColour, gradient, gradient_id, id, ids, nodes, startColour, _i, _len, _ref, _results;
-      defs = this.a.vis.select("" + this.a.conf.divSelector + " svg");
-      Q = {};
-      nodes = this.a._nodes;
-      _ref = _.map(edges, function(edge) {
-        return edge._d3;
-      });
-      for (_i = 0, _len = _ref.length; _i < _len; _i++) {
-        edge = _ref[_i];
-        if (nodes[edge.source.id]._properties.root || nodes[edge.target.id]._properties.root) {
-          continue;
-        }
-        if (nodes[edge.source.id]._properties[this.clusterKey] === nodes[edge.target.id]._properties[this.clusterKey]) {
-          continue;
-        }
-        if (nodes[edge.target.id]._properties[this.clusterKey] !== nodes[edge.source.id]._properties[this.clusterKey]) {
-          id = nodes[edge.source.id]._properties[this.clusterKey] + "-" + nodes[edge.target.id]._properties[this.clusterKey];
-          if (id in Q) {
-            continue;
-          } else if (!(id in Q)) {
-            startColour = this.getClusterColour(nodes[edge.target.id]._properties[this.clusterKey]);
-            endColour = this.getClusterColour(nodes[edge.source.id]._properties[this.clusterKey]);
-            Q[id] = {
-              'startColour': startColour,
-              'endColour': endColour
-            };
-          }
-        }
-      }
-      _results = [];
-      for (ids in Q) {
-        gradient_id = "cluster-gradient-" + ids;
-        gradient = defs.append("svg:linearGradient").attr("id", gradient_id);
-        gradient.append("svg:stop").attr("offset", "0%").attr("stop-color", Q[ids]['startColour']);
-        _results.push(gradient.append("svg:stop").attr("offset", "100%").attr("stop-color", Q[ids]['endColour']));
-      }
-      return _results;
-    };
-
-    return Clustering;
-
-  })();
-
-  Alchemy.prototype.clusterControls = {
-    init: function() {
-      var changeClusterHTML;
-      changeClusterHTML = "<input class='form-control form-inline' id='cluster-key' placeholder=\"Cluster Key\"></input>";
-      this.a.dash.select("#clustering-container").append("div").attr("id", "cluster-key-container").attr('class', 'property form-inline form-group').html(changeClusterHTML).style("display", "none");
-      this.a.dash.select("#cluster_control_header").on("click", function() {
-        var display, element;
-        element = this.a.dash.select("#cluster-key-container");
-        return display = element.style("display");
-      });
-      element.style("display", function(e) {
-        if (display === "block") {
-          return "none";
-        } else {
-          return "block";
-        }
-      });
-      if (this.a.dash.select("#cluster-key-container").style("display") === "none") {
-        this.a.dash.select("#cluster-arrow").attr("class", "fa fa-2x fa-caret-right");
-      } else {
-        this.a.dash.select("#cluster-arrow").attr("class", "fa fa-2x fa-caret-down");
-      }
-      return this.a.dash.select("#cluster-key").on("keydown", function() {
-        if (d3.event.keyIdentifier === "Enter") {
-          this.a.conf.cluster = true;
-          this.a.conf.clusterKey = this.value;
-          return this.a.generateLayout();
-        }
-      });
-    }
-  };
-
-  Alchemy.prototype.controlDash = function(instance) {
-    var a;
-    a = instance;
-    return {
-      init: function() {
-        var divSelector;
-        if (this.dashIsShown()) {
-          divSelector = a.conf.divSelector;
-          a.dash = d3.select("" + divSelector).append("div").attr("id", "control-dash-wrapper").attr("class", "col-md-4 initial");
-          a.dash.append("i").attr("id", "dash-toggle").attr("class", "fa fa-flask col-md-offset-12");
-          a.dash.append("div").attr("id", "control-dash").attr("class", "col-md-12");
-          a.dash.select('#dash-toggle').on('click', a.interactions.toggleControlDash);
-          a.controlDash.zoomCtrl();
-          a.controlDash.search();
-          a.controlDash.filters();
-          a.controlDash.stats();
-          a.controlDash.clustering();
-          return a.controlDash.exports();
-        }
-      },
-      search: function() {
-        if (a.conf.search) {
-          a.dash.select("#control-dash").append("div").attr("id", "search").html("<div class='input-group'>\n    <input class='form-control' placeholder='Search'>\n    <i class='input-group-addon search-icon'><span class='fa fa-search fa-1x'></span></i>\n</div> ");
-          return a.search.init();
-        }
-      },
-      zoomCtrl: function() {
-        if (a.conf.zoomControls) {
-          a.dash.select("#control-dash-wrapper").append("div").attr("id", "zoom-controls").attr("class", "col-md-offset-12").html("<button id='zoom-reset'  class='btn btn-defualt btn-primary'><i class='fa fa-crosshairs fa-lg'></i></button> <button id='zoom-in'  class='btn btn-defualt btn-primary'><i class='fa fa-plus'></i></button> <button id='zoom-out' class='btn btn-default btn-primary'><i class='fa fa-minus'></i></button>");
-          a.dash.select('#zoom-in').on("click", function() {
-            return a.interactions.clickZoom('in');
-          });
-          a.dash.select('#zoom-out').on("click", function() {
-            return a.interactions.clickZoom('out');
-          });
-          return a.dash.select('#zoom-reset').on("click", function() {
-            return a.interactions.clickZoom('reset');
-          });
-        }
-      },
-      filters: function() {
-        if (a.conf.nodeFilters || a.conf.edgeFilters) {
-          a.dash.select("#control-dash").append("div").attr("id", "filters");
-          return a.filters.init();
-        }
-      },
-      stats: function() {
-        var stats_html;
-        if (a.conf.nodeStats || a.conf.edgeStats) {
-          stats_html = "<div id = \"stats-header\" data-toggle=\"collapse\" data-target=\"#stats #all-stats\">\n<h3>\n    Statistics\n</h3>\n<span class = \"fa fa-caret-right fa-2x\"></span>\n</div>\n<div id=\"all-stats\" class=\"collapse\">\n    <ul class = \"list-group\" id=\"node-stats\"></ul>\n    <ul class = \"list-group\" id=\"rel-stats\"></ul>  \n</div>";
-          a.dash.select("#control-dash").append("div").attr("id", "stats").html(stats_html).select('#stats-header').on('click', function() {
-            if (a.dash.select('#all-stats').classed("in")) {
-              return a.dash.select("#stats-header>span").attr("class", "fa fa-2x fa-caret-right");
-            } else {
-              return a.dash.select("#stats-header>span").attr("class", "fa fa-2x fa-caret-down");
-            }
-          });
-          return a.stats.init();
-        }
-      },
-      exports: function() {
-        var exports_html;
-        if (a.conf.exportSVG) {
-          exports_html = "<div id=\"exports-header\" data-toggle=\"collapse\" data-target=\"#all-exports\" style=\"padding:10px;\">\n    <h3>\n        Exports\n    </h3>\n    <span class=\"fa fa-caret-right fa-2x\"></span>\n</div>\n<div id=\"all-exports\" class=\"collapse\"></div>";
-          a.dash.select("#control-dash").append("div").attr("id", "exports").attr("style", "padding: 0.5em 1em; border-bottom: thin dashed #E89619; color: white;").html(exports_html).select("#exports-header");
-          return a.exports.init();
-        }
-      },
-      clustering: function() {
-        var clusterControl_html;
-        if (a.conf.clusterControl) {
-          clusterControl_html = "<div id=\"clustering-container\">\n    <div id=\"cluster_control_header\" data-toggle=\"collapse\" data-target=\"#clustering #cluster-options\">\n         <h3>Clustering</h3>\n        <span id=\"cluster-arrow\" class=\"fa fa-2x fa-caret-right\"></span>\n    </div>\n</div>";
-          a.dash.select("#control-dash").append("div").attr("id", "clustering").html(clusterControl_html).select('#cluster_control_header');
-          return a.clusterControls.init();
-        }
-      },
-      dashIsShown: function() {
-        var conf;
-        conf = a.conf;
-        return conf.showEditor || conf.captionToggle || conf.toggleRootNodes || conf.removeElement || conf.clusterControl || conf.nodeStats || conf.edgeStats || conf.edgeFilters || conf.nodeFilters || conf.edgesToggle || conf.nodesToggle || conf.search || conf.exportSVG;
-      }
-    };
-  };
-
-  Alchemy.prototype.filters = (function(_this) {
-    return function(instance) {
-      var a;
-      a = instance;
-      return {
-        init: function() {
-          var caption, edgeType, edgeTypes, nodeKey, nodeType, nodeTypes, types, _i, _j, _len, _len1, _ref;
-          a.filters.show();
-          if (a.conf.edgeFilters) {
-            a.filters.showEdgeFilters();
-          }
-          if (a.conf.nodeFilters) {
-            a.filters.showNodeFilters();
-          }
-          if (a.conf.nodeTypes) {
-            nodeKey = Object.keys(a.conf.nodeTypes);
-            nodeTypes = '';
-            _ref = a.conf.nodeTypes[nodeKey];
-            for (_i = 0, _len = _ref.length; _i < _len; _i++) {
-              nodeType = _ref[_i];
-              caption = nodeType.replace('_', ' ');
-              nodeTypes += "<li class='list-group-item nodeType' role='menuitem' id='li-" + nodeType + "' name=" + nodeType + ">" + caption + "</li>";
-            }
-            a.dash.select('#node-dropdown').html(nodeTypes);
-          }
-          if (a.conf.edgeTypes) {
-            if (_.isPlainObject(a.conf.edgeTypes)) {
-              types = _.values(a.conf.edgeTypes)[0];
-            } else {
-              types = a.conf.edgeTypes;
-            }
-            edgeTypes = '';
-            for (_j = 0, _len1 = types.length; _j < _len1; _j++) {
-              edgeType = types[_j];
-              caption = edgeType.replace('_', ' ');
-              edgeTypes += "<li class='list-group-item edgeType' role='menuitem' id='li-" + edgeType + "' name=" + edgeType + ">" + caption + "</li>";
-            }
-            a.dash.select('#rel-dropdown').html(edgeTypes);
-          }
-          if (a.conf.captionsToggle) {
-            a.filters.captionsToggle();
-          }
-          if (a.conf.edgesToggle) {
-            a.filters.edgesToggle();
-          }
-          if (a.conf.nodesToggle) {
-            a.filters.nodesToggle();
-          }
-          return a.filters.update();
-        },
-        show: function() {
-          var filter_html;
-          filter_html = "<div id = \"filter-header\" data-toggle=\"collapse\" data-target=\"#filters form\">\n    <h3>Filters</h3>\n    <span class = \"fa fa-2x fa-caret-right\"></span>\n</div>\n    <form class=\"form-inline collapse\">\n    </form>";
-          a.dash.select('#control-dash #filters').html(filter_html);
-          a.dash.selectAll('#filter-header').on('click', function() {
-            if (a.dash.select('#filters>form').classed("in")) {
-              return a.dash.select("#filter-header>span").attr("class", "fa fa-2x fa-caret-right");
-            } else {
-              return a.dash.select("#filter-header>span").attr("class", "fa fa-2x fa-caret-down");
-            }
-          });
-          return a.dash.select('#filters form');
-        },
-        showEdgeFilters: function() {
-          var rel_filter_html;
-          rel_filter_html = "<div id=\"filter-rel-header\" data-target = \"#rel-dropdown\" data-toggle=\"collapse\">\n    <h4>\n        Edge Types\n    </h4>\n    <span class=\"fa fa-lg fa-caret-right\"></span>\n</div>\n<ul id=\"rel-dropdown\" class=\"collapse list-group\" role=\"menu\">\n</ul>";
-          a.dash.select('#filters form').append("div").attr("id", "filter-relationships").html(rel_filter_html);
-          return a.dash.select("#filter-rel-header").on('click', function() {
-            if (a.dash.select('#rel-dropdown').classed("in")) {
-              return a.dash.select("#filter-rel-header>span").attr("class", "fa fa-lg fa-caret-right");
-            } else {
-              return a.dash.select("#filter-rel-header>span").attr("class", "fa fa-lg fa-caret-down");
-            }
-          });
-        },
-        showNodeFilters: function() {
-          var node_filter_html;
-          node_filter_html = "<div id=\"filter-node-header\" data-target = \"#node-dropdown\" data-toggle=\"collapse\">\n    <h4>\n        Node Types\n    </h4>\n    <span class=\"fa fa-lg fa-caret-right\"></span>\n</div>\n<ul id=\"node-dropdown\" class=\"collapse list-group\" role=\"menu\">\n</ul>";
-          a.dash.select('#filters form').append("div").attr("id", "filter-nodes").html(node_filter_html);
-          return a.dash.select("#filter-node-header").on('click', function() {
-            if (a.dash.select('#node-dropdown').classed("in")) {
-              return a.dash.select("#filter-node-header>span").attr("class", "fa fa-lg fa-caret-right");
-            } else {
-              return a.dash.select("#filter-node-header>span").attr("class", "fa fa-lg fa-caret-down");
-            }
-          });
-        },
-        captionsToggle: function() {
-          return a.dash.select("#filters form").append("li").attr({
-            "id": "toggle-captions",
-            "class": "list-group-item active-label toggle"
-          }).html("Show Captions").on("click", function() {
-            var isDisplayed;
-            isDisplayed = a.dash.select("g text").attr("style");
-            if (isDisplayed === "display: block" || null) {
-              return a.dash.selectAll("g text").attr("style", "display: none");
-            } else {
-              return a.dash.selectAll("g text").attr("style", "display: block");
-            }
-          });
-        },
-        edgesToggle: function() {
-          return a.dash.select("#filters form").append("li").attr({
-            "id": "toggle-edges",
-            "class": "list-group-item active-label toggle"
-          }).html("Toggle Edges").on("click", function() {
-            if (_.contains(_.pluck(_.flatten(_.values(a._edges)), "_state"), "active")) {
-              return _.each(_.values(a._edges), function(edges) {
-                return _.each(edges, function(e) {
-                  if (e._state === "active") {
-                    return e.toggleHidden();
-                  }
-                });
-              });
-            } else {
-              return _.each(_.values(a._edges), function(edges) {
-                return _.each(edges, function(e) {
-                  var source, target;
-                  source = a._nodes[e._properties.source];
-                  target = a._nodes[e._properties.target];
-                  if (source._state === "active" && target._state === "active") {
-                    return e.toggleHidden();
-                  }
-                });
-              });
-            }
-          });
-        },
-        nodesToggle: function() {
-          return a.dash.select("#filters form").append("li").attr({
-            "id": "toggle-nodes",
-            "class": "list-group-item active-label toggle"
-          }).html("Toggle Nodes").on("click", function() {
-            var nodes;
-            nodes = _.values(a._nodes);
-            if (_.contains(_.pluck(nodes, "_state"), "active")) {
-              return _.each(nodes, function(n) {
-                if (a.conf.toggleRootNodes && n._d3.root) {
-                  return;
-                }
-                if (n._state === "active") {
-                  return n.toggleHidden();
-                }
-              });
-            } else {
-              return _.each(_.values(a._nodes), function(n) {
-                if (a.conf.toggleRootNodes && n._d3.root) {
-                  return;
-                }
-                return n.toggleHidden();
-              });
-            }
-          });
-        },
-        update: function() {
-          return a.dash.selectAll(".nodeType, .edgeType").on("click", function() {
-            var element, tag;
-            element = d3.select(this);
-            tag = element.attr("name");
-            a.vis.selectAll("." + tag).each(function(d) {
-              var edge, node, source, target;
-              if (a._nodes[d.id] != null) {
-                node = a._nodes[d.id];
-                return node.toggleHidden();
-              } else {
-                edge = a._edges[d.id][0];
-                source = a._nodes[edge._properties.source];
-                target = a._nodes[edge._properties.target];
-                if (source._state === "active" && target._state === "active") {
-                  return edge.toggleHidden();
-                }
-              }
-            });
-            return a.stats.nodeStats();
-          });
-        }
-      };
-    };
-  })(this);
-
-  Alchemy.prototype.Index = function(instance, all) {
-    var a, edges, elements, nodes;
-    a = instance;
-    elements = {
-      nodes: {
-        val: (function() {
-          return _.values(a._nodes);
-        })()
-      },
-      edges: {
-        val: (function() {
-          return _.values(a._edges);
-        })()
-      }
-    };
-    nodes = elements.nodes;
-    edges = elements.edges;
-    elements.edges.flat = (function() {
-      return _.flatten(edges.val);
-    })();
-    elements.nodes.d3 = (function() {
-      return _.map(nodes.val, function(n) {
-        return n._d3;
-      });
-    })();
-    elements.edges.d3 = (function() {
-      return _.map(edges.flat, function(e) {
-        return e._d3;
-      });
-    })();
-    a.elements = elements;
-    return function() {
-      a.elements.nodes.svg = (function() {
-        return a.vis.selectAll('g.node');
-      })();
-      return a.elements.edges.svg = (function() {
-        return a.vis.selectAll('g.edge');
-      })();
-    };
-  };
-
-  Alchemy.prototype.interactions = function(instance) {
-    var a;
-    a = instance;
-    return {
-      edgeClick: function(d) {
-        var edge;
-        if (d3.event.defaultPrevented) {
-          return;
-        }
-        d3.event.stopPropagation();
-        edge = d.self;
-        if (typeof a.conf.edgeClick === 'function') {
-          a.conf.edgeClick(edge);
-        }
-        if (edge._state !== "hidden") {
-          edge._state = (function() {
-            if (edge._state === "selected") {
-              return "active";
-            }
-            return "selected";
-          })();
-          return edge.setStyles();
-        }
-      },
-      edgeMouseOver: function(d) {
-        var edge;
-        edge = d.self;
-        if (edge._state !== "hidden") {
-          if (edge._state !== "selected") {
-            edge._state = "highlighted";
-          }
-          return edge.setStyles();
-        }
-      },
-      edgeMouseOut: function(d) {
-        var edge;
-        edge = d.self;
-        if (edge._state !== "hidden") {
-          if (edge._state !== "selected") {
-            edge._state = "active";
-          }
-          return edge.setStyles();
-        }
-      },
-      nodeMouseOver: function(n) {
-        var node;
-        node = n.self;
-        if (node._state !== "hidden") {
-          if (node._state !== "selected") {
-            node._state = "highlighted";
-            node.setStyles();
-          }
-          if (typeof a.conf.nodeMouseOver === 'function') {
-            return a.conf.nodeMouseOver(node);
-          } else if (typeof a.conf.nodeMouseOver === ('number' || 'string')) {
-            return node.properties[a.conf.nodeMouseOver];
-          }
-        }
-      },
-      nodeMouseOut: function(n) {
-        var node;
-        node = n.self;
-        a = node.a;
-        if (node._state !== "hidden") {
-          if (node._state !== "selected") {
-            node._state = "active";
-            node.setStyles();
-          }
-          if ((a.conf.nodeMouseOut != null) && typeof a.conf.nodeMouseOut === 'function') {
-            return a.conf.nodeMouseOut(n);
-          }
-        }
-      },
-      nodeClick: function(n) {
-        var node;
-        if (d3.event.defaultPrevented) {
-          return;
-        }
-        d3.event.stopPropagation();
-        node = n.self;
-        if (typeof a.conf.nodeClick === 'function') {
-          a.conf.nodeClick(node);
-        }
-        if (node._state !== "hidden") {
-          node._state = (function() {
-            if (node._state === "selected") {
-              return "active";
-            }
-            return "selected";
-          })();
-          return node.setStyles();
-        }
-      },
-      zoom: function(extent) {
-        if (this._zoomBehavior == null) {
-          this._zoomBehavior = d3.behavior.zoom();
-        }
-        return this._zoomBehavior.scaleExtent(extent).on("zoom", function(d) {
-          a = Alchemy.prototype.getInst(this);
-          return a.vis.attr("transform", "translate(" + d3.event.translate + ") scale(" + d3.event.scale + ")");
-        });
-      },
-      clickZoom: function(direction) {
-        var scale, x, y, _ref;
-        _ref = a.vis.attr("transform").match(/(-*\d+\.*\d*)/g).map(function(a) {
-          return parseFloat(a);
-        }), x = _ref[0], y = _ref[1], scale = _ref[2];
-        a.vis.attr("transform", function() {
-          if (direction === "in") {
-            if (scale < a.conf.scaleExtent[1]) {
-              scale += 0.2;
-            }
-            return "translate(" + x + "," + y + ") scale(" + scale + ")";
-          } else if (direction === "out") {
-            if (scale > a.conf.scaleExtent[0]) {
-              scale -= 0.2;
-            }
-            return "translate(" + x + "," + y + ") scale(" + scale + ")";
-          } else if (direction === "reset") {
-            return "translate(0,0) scale(1)";
-          } else {
-            return console.log('error');
-          }
-        });
-        if (this._zoomBehavior == null) {
-          this._zoomBehavior = d3.behavior.zoom();
-        }
-        return this._zoomBehavior.scale(scale).translate([x, y]);
-      },
-      nodeDragStarted: function(d, i) {
-        d3.event.preventDefault;
-        d3.event.sourceEvent.stopPropagation();
-        d3.select(this).classed("dragging", true);
-        return d.fixed = true;
-      },
-      nodeDragged: function(d, i) {
-        var edges, node;
-        a = d.self.a;
-        d.x += d3.event.dx;
-        d.y += d3.event.dy;
-        d.px += d3.event.dx;
-        d.py += d3.event.dy;
-        node = d3.select(this);
-        node.attr("transform", "translate(" + d.x + ", " + d.y + ")");
-        edges = d.self._adjacentEdges;
-        return _.each(edges, function(edge) {
-          var selection;
-          selection = a.vis.select("#edge-" + edge.id + "-" + edge._index);
-          return a._drawEdges.updateEdge(selection.data()[0]);
-        });
-      },
-      nodeDragended: function(d, i) {
-        a = d.self.a;
-        d3.select(this).classed({
-          "dragging": false
-        });
-        if (!a.conf.forceLocked) {
-          return a.force.start();
-        }
-      },
-      nodeDoubleClick: function(d) {
-        return null;
-      },
-      deselectAll: function() {
-        var _ref;
-        a = Alchemy.prototype.getInst(this);
-        if ((_ref = d3.event) != null ? _ref.defaultPrevented : void 0) {
-          return;
-        }
-        if (a.conf.showEditor === true) {
-          a.modifyElements.nodeEditorClear();
-        }
-        _.each(a._nodes, function(n) {
-          n._state = "active";
-          return n.setStyles();
-        });
-        _.each(a._edges, function(edge) {
-          return _.each(edge, function(e) {
-            e._state = "active";
-            return e.setStyles();
-          });
-        });
-        if (a.conf.deselectAll && typeof (a.conf.deselectAll === 'function')) {
-          return a.conf.deselectAll();
-        }
-      }
-    };
-  };
-
-  Layout = (function() {
-    function Layout(instance) {
-      this.tick = __bind(this.tick, this);
-      this.linkStrength = __bind(this.linkStrength, this);
-      this.gravity = __bind(this.gravity, this);
-      var a, conf, nodes;
-      this.a = a = instance;
-      conf = this.a.conf;
-      nodes = this.a._nodes;
-      this.k = Math.sqrt(Math.log(_.size(this.a._nodes)) / (conf.graphWidth() * conf.graphHeight()));
-      this._clustering = new this.a.clustering(this.a);
-      this.d3NodeInternals = a.elements.nodes.d3;
-      if (conf.cluster) {
-        this._charge = function() {
-          return this._clustering.layout.charge;
-        };
-        this._linkStrength = function(edge) {
-          return this._clustering.layout.linkStrength(edge);
-        };
-      } else {
-        this._charge = function() {
-          return -10 / this.k;
-        };
-        this._linkStrength = function(edge) {
-          if (nodes[edge.source.id].getProperties('root') || nodes[edge.target.id].getProperties('root')) {
-            return 1;
-          } else {
-            return 0.9;
-          }
-        };
-      }
-      if (conf.cluster) {
-        this._linkDistancefn = function(edge) {
-          return this._clustering.layout.linkDistancefn(edge);
-        };
-      } else if (conf.linkDistancefn === 'default') {
-        this._linkDistancefn = function(edge) {
-          return 1 / (this.k * 50);
-        };
-      } else if (typeof conf.linkDistancefn === 'number') {
-        this._linkDistancefn = function(edge) {
-          return conf.linkDistancefn;
-        };
-      } else if (typeof conf.linkDistancefn === 'function') {
-        this._linkDistancefn = function(edge) {
-          return conf.linkDistancefn(edge);
-        };
-      }
-    }
-
-    Layout.prototype.gravity = function() {
-      if (this.a.conf.cluster) {
-        return this._clustering.layout.gravity(this.k);
-      } else {
-        return 50 * this.k;
-      }
-    };
-
-    Layout.prototype.linkStrength = function(edge) {
-      return this._linkStrength(edge);
-    };
-
-    Layout.prototype.friction = function() {
-      return 0.9;
-    };
-
-    Layout.prototype.collide = function(node) {
-      var conf, nx1, nx2, ny1, ny2, r;
-      conf = this.a.conf;
-      r = 2 * (node.radius + node['stroke-width']) + conf.nodeOverlap;
-      nx1 = node.x - r;
-      nx2 = node.x + r;
-      ny1 = node.y - r;
-      ny2 = node.y + r;
-      return function(quad, x1, y1, x2, y2) {
-        var l, x, y;
-        if (quad.point && (quad.point !== node)) {
-          x = node.x - Math.abs(quad.point.x);
-          y = node.y - quad.point.y;
-          l = Math.sqrt(x * x + y * y);
-          r = r;
-          if (l < r) {
-            l = (l - r) / l * conf.alpha;
-            node.x -= x *= l;
-            node.y -= y *= l;
-            quad.point.x += x;
-            quad.point.y += y;
-          }
-        }
-        return x1 > nx2 || x2 < nx1 || y1 > ny2 || y2 < ny1;
-      };
-    };
-
-    Layout.prototype.tick = function(draw) {
-      var a, edges, node, nodes, q, _i, _len, _ref;
-      a = this.a;
-      nodes = a.elements.nodes.svg;
-      edges = a.elements.edges.svg;
-      if (a.conf.collisionDetection) {
-        q = d3.geom.quadtree(this.d3NodeInternals);
-        _ref = this.d3NodeInternals;
-        for (_i = 0, _len = _ref.length; _i < _len; _i++) {
-          node = _ref[_i];
-          q.visit(this.collide(node));
-        }
-      }
-      nodes.attr("transform", function(d) {
-        return "translate(" + d.x + "," + d.y + ")";
-      });
-      this.drawEdge = a.drawing.DrawEdge;
-      this.drawEdge.styleText(edges);
-      return this.drawEdge.styleLink(edges);
-    };
-
-    Layout.prototype.positionRootNodes = function() {
-      var conf, container, i, n, rootNodes, _i, _len, _ref, _ref1, _results;
-      conf = this.a.conf;
-      container = {
-        width: conf.graphWidth(),
-        height: conf.graphHeight()
-      };
-      rootNodes = _.filter(this.a.elements.nodes.val, function(node) {
-        return node.getProperties('root');
-      });
-      if (rootNodes.length === 1) {
-        n = rootNodes[0];
-        _ref = [container.width / 2, container.width / 2], n._d3.x = _ref[0], n._d3.px = _ref[1];
-        _ref1 = [container.height / 2, container.height / 2], n._d3.y = _ref1[0], n._d3.py = _ref1[1];
-        n._d3.fixed = true;
-      } else {
-        _results = [];
-        for (i = _i = 0, _len = rootNodes.length; _i < _len; i = ++_i) {
-          n = rootNodes[i];
-          n._d3.x = container.width / Math.sqrt(rootNodes.length * (i + 1));
-          n._d3.y = container.height / 2;
-          _results.push(n._d3.fixed = true);
-        }
-        return _results;
-      }
-    };
-
-    Layout.prototype.chargeDistance = function() {
-      return 500;
-    };
-
-    Layout.prototype.linkDistancefn = function(edge) {
-      return this._linkDistancefn(edge);
-    };
-
-    Layout.prototype.charge = function() {
-      return this._charge();
-    };
-
-    return Layout;
-
-  })();
-
-  Alchemy.prototype.generateLayout = function(instance) {
-    var a;
-    a = instance;
-    return function(start) {
-      var conf;
-      if (start == null) {
-        start = false;
-      }
-      conf = a.conf;
-      a.layout = new Layout(a);
-      return a.force = d3.layout.force().size([conf.graphWidth(), conf.graphHeight()]).theta(1.0).gravity(a.layout.gravity()).friction(a.layout.friction()).nodes(a.elements.nodes.d3).links(a.elements.edges.d3).linkDistance(function(link) {
-        return a.layout.linkDistancefn(link);
-      }).linkStrength(function(link) {
-        return a.layout.linkStrength(link);
-      }).charge(a.layout.charge()).chargeDistance(a.layout.chargeDistance());
-    };
-  };
-
-  Alchemy.prototype.search = function(instance) {
-    var a;
-    a = instance;
-    return {
-      init: function() {
-        var searchBox;
-        searchBox = a.dash.select("#search input");
-        return searchBox.on("keyup", function() {
-          var input;
-          input = searchBox[0][0].value.toLowerCase();
-          a.vis.selectAll(".node").classed("inactive", false);
-          a.vis.selectAll("text").attr("style", function() {
-            if (input !== "") {
-              return "display: inline;";
-            }
-          });
-          return a.vis.selectAll(".node").classed("inactive", function(node) {
-            var DOMtext, hidden;
-            DOMtext = d3.select(this).text();
-            switch (a.conf.searchMethod) {
-              case 'contains':
-                hidden = DOMtext.toLowerCase().indexOf(input) < 0;
-                break;
-              case 'begins':
-                hidden = DOMtext.toLowerCase().indexOf(input) !== 0;
-            }
-            if (hidden) {
-              a.vis.selectAll("[source-target*='" + node.id + "']").classed("inactive", hidden);
-            } else {
-              a.vis.selectAll("[source-target*='" + node.id + "']").classed("inactive", function(edge) {
-                var nodeIDs, sourceHidden, targetHidden;
-                nodeIDs = [edge.source.id, edge.target.id];
-                sourceHidden = a.vis.select("#node-" + nodeIDs[0]).classed("inactive");
-                targetHidden = a.vis.select("#node-" + nodeIDs[1]).classed("inactive");
-                return targetHidden || sourceHidden;
-              });
-            }
-            return hidden;
-          });
-        });
-      }
-    };
-  };
-
-  Alchemy.prototype.startGraph = function(instance) {
-    var a;
-    a = instance;
-    return function(data) {
-      var conf, d3Edges, d3Nodes, defs, editor, editorInteractions;
-      conf = a.conf;
-      if (d3.select(conf.divSelector).empty()) {
-        console.warn(a.utils.warnings.divWarning());
-      }
-      if (!data) {
-        data = {
-          nodes: [],
-          edges: []
-        };
-        a.utils.warnings.dataWarning();
-      }
-      if (data.edges == null) {
-        data.edges = [];
-      }
-      a.create.nodes(data.nodes);
-      data.edges.forEach(function(e) {
-        return a.create.edges(e);
-      });
-      a.vis = d3.select(conf.divSelector).attr("style", "width:" + (conf.graphWidth()) + "px; height:" + (conf.graphHeight()) + "px; background:" + conf.backgroundColour + ";").append("svg").attr("xmlns", "http://www.w3.org/2000/svg").attr("xlink", "http://www.w3.org/1999/xlink").attr("pointer-events", "all").attr("style", "background:" + conf.backgroundColour + ";").attr("alchInst", Alchemy.prototype.instances.length - 1).on('click', a.interactions.deselectAll).call(a.interactions.zoom(conf.scaleExtent)).on("dblclick.zoom", null).append('g').attr("transform", "translate(" + conf.initialTranslate + ") scale(" + conf.initialScale + ")");
-      a.interactions.zoom().scale(conf.initialScale);
-      a.interactions.zoom().translate(conf.initialTranslate);
-      a.index = Alchemy.prototype.Index(a);
-      a.generateLayout();
-      a.controlDash.init();
-      d3Edges = a.elements.edges.d3;
-      d3Nodes = a.elements.nodes.d3;
-      a.layout.positionRootNodes();
-      a.force.start();
-      if (conf.forceLocked) {
-        while (a.force.alpha() > 0.005) {
-          a.force.tick();
-        }
-      }
-      a._drawEdges = a.drawing.DrawEdges;
-      a._drawNodes = a.drawing.DrawNodes;
-      a._drawEdges.createEdge(d3Edges);
-      a._drawNodes.createNode(d3Nodes);
-      a.index();
-      a.elements.nodes.svg.attr("transform", function(id, i) {
-        return "translate(" + id.x + ", " + id.y + ")";
-      });
-      console.log(Date() + ' completed initial computation');
-      if (!conf.forceLocked) {
-        a.force.on("tick", a.layout.tick).start();
-      }
-      if (conf.afterLoad != null) {
-        if (typeof conf.afterLoad === 'function') {
-          conf.afterLoad();
-        } else if (typeof conf.afterLoad === 'string') {
-          a[conf.afterLoad] = true;
-        }
-      }
-      if (conf.cluster) {
-        defs = d3.select("" + a.conf.divSelector + " svg").append("svg:defs");
-      }
-      if (conf.nodeStats) {
-        a.stats.nodeStats();
-      }
-      if (conf.showEditor) {
-        editor = new a.editor.Editor;
-        editorInteractions = new a.editor.Interactions;
-        d3.select("body").on('keydown', editorInteractions.deleteSelected);
-        editor.startEditor();
-      }
-      return a.initial = true;
-    };
-  };
-
-  Alchemy.prototype.stats = function(instance) {
-    var a;
-    a = instance;
-    return {
-      init: function() {
-        return a.stats.update();
-      },
-      nodeStats: function() {
-        var activeNodes, allNodes, caption, inactiveNodes, nodeData, nodeGraph, nodeKeys, nodeNum, nodeStats, nodeType, nodeTypes, _i, _len, _ref;
-        nodeData = [];
-        allNodes = a.get.allNodes().length;
-        activeNodes = a.get.activeNodes().length;
-        inactiveNodes = allNodes - activeNodes;
-        nodeStats = "<li class = 'list-group-item gen_node_stat'>Number of nodes: <span class='badge'>" + allNodes + "</span></li> <li class = 'list-group-item gen_node_stat'>Number of active nodes: <span class='badge'>" + activeNodes + "</span></li> <li class = 'list-group-item gen_node_stat'>Number of inactive nodes: <span class='badge'>" + inactiveNodes + "</span></li></br>";
-        if (a.conf.nodeTypes) {
-          nodeKeys = Object.keys(a.conf.nodeTypes);
-          nodeTypes = '';
-          _ref = a.conf.nodeTypes[nodeKeys];
-          for (_i = 0, _len = _ref.length; _i < _len; _i++) {
-            nodeType = _ref[_i];
-            caption = nodeType.replace('_', ' ');
-            nodeNum = a.vis.selectAll("g.node." + nodeType)[0].length;
-            nodeTypes += "<li class = 'list-group-item nodeType' id='li-" + nodeType + "' name = " + caption + ">Number of <strong style='text-transform: uppercase'>" + caption + "</strong> nodes: <span class='badge'>" + nodeNum + "</span></li>";
-            nodeData.push(["" + nodeType, nodeNum]);
-          }
-          nodeStats += nodeTypes;
-        }
-        nodeGraph = "<li id='node-stats-graph' class='list-group-item'></li>";
-        nodeStats += nodeGraph;
-        a.dash.select('#node-stats').html(nodeStats);
-        return this.insertSVG("node", nodeData);
-      },
-      edgeStats: function() {
-        var activeEdges, allEdges, caption, edgeData, edgeGraph, edgeKeys, edgeNum, edgeStats, edgeType, edgeTypes, inactiveEdges, _i, _len;
-        edgeData = [];
-        allEdges = a.get.allEdges().length;
-        activeEdges = a.get.activeEdges().length;
-        inactiveEdges = allEdges - activeEdges;
-        edgeStats = "<li class = 'list-group-item gen_edge_stat'>Number of relationships: <span class='badge'>" + allEdges + "</span></li> <li class = 'list-group-item gen_edge_stat'>Number of active relationships: <span class='badge'>" + activeEdges + "</span></li> <li class = 'list-group-item gen_edge_stat'>Number of inactive relationships: <span class='badge'>" + inactiveEdges + "</span></li></br>";
-        if (a.conf.edgeTypes) {
-          edgeKeys = _.values(alchemy.conf.edgeTypes)[0];
-          edgeTypes = '';
-          for (_i = 0, _len = edgeKeys.length; _i < _len; _i++) {
-            edgeType = edgeKeys[_i];
-            if (!edgeType) {
-              continue;
-            }
-            caption = edgeType.replace('_', ' ');
-            edgeNum = _.filter(a.get.allEdges(), function(edge) {
-              if (edge._edgeType === edgeType) {
-                return edge;
-              }
-            }).length;
-            edgeTypes += "<li class = 'list-group-item edgeType' id='li-" + edgeType + "' name = " + caption + ">Number of <strong style='text-transform: uppercase'>" + caption + "</strong> relationships: <span class='badge'>" + edgeNum + "</span></li>";
-            edgeData.push(["" + caption, edgeNum]);
-          }
-          edgeStats += edgeTypes;
-        }
-        edgeGraph = "<li id='node-stats-graph' class='list-group-item'></li>";
-        edgeStats += edgeGraph;
-        a.dash.select('#rel-stats').html(edgeStats);
-        return this.insertSVG("edge", edgeData);
-      },
-      insertSVG: function(element, data) {
-        var arc, arcs, color, height, pie, radius, svg, width;
-        if (data === null) {
-          return a.dash.select("#" + element + "-stats-graph").html("<br><h4 class='no-data'>There are no " + element + "Types listed in your conf.</h4>");
-        } else {
-          width = a.conf.graphWidth() * .25;
-          height = 250;
-          radius = width / 4;
-          color = d3.scale.category20();
-          arc = d3.svg.arc().outerRadius(radius - 10).innerRadius(radius / 2);
-          pie = d3.layout.pie().sort(null).value(function(d) {
-            return d[1];
-          });
-          svg = a.dash.select("#" + element + "-stats-graph").append("svg").append("g").style({
-            "width": width,
-            "height": height
-          }).attr("transform", "translate(" + width / 2 + "," + height / 2 + ")");
-          arcs = svg.selectAll(".arc").data(pie(data)).enter().append("g").classed("arc", true).on("mouseover", function(d, i) {
-            return a.dash.select("#" + data[i][0] + "-stat").classed("hidden", false);
-          }).on("mouseout", function(d, i) {
-            return a.dash.select("#" + data[i][0] + "-stat").classed("hidden", true);
-          });
-          arcs.append("path").attr("d", arc).attr("stroke", function(d, i) {
-            return color(i);
-          }).attr("stroke-width", 2).attr("fill-opacity", "0.3");
-          return arcs.append("text").attr("transform", function(d) {
-            return "translate(" + arc.centroid(d) + ")";
-          }).attr("id", function(d, i) {
-            return "" + data[i][0] + "-stat";
-          }).attr("dy", ".35em").classed("hidden", true).text(function(d, i) {
-            return data[i][0];
-          });
-        }
-      },
-      update: function() {
-        if (a.conf.nodeStats) {
-          this.nodeStats();
-        }
-        if (a.conf.edgeStats) {
-          return this.edgeStats();
-        }
-      }
-    };
-  };
-
-  Alchemy.prototype.updateGraph = function(instance) {
-    var a;
-    a = instance;
-    return function() {
-      a.generateLayout();
-      a._drawEdges.createEdge(a.elements.edges.d3);
-      a._drawNodes.createNode(a.elements.nodes.d3);
-      a.layout.positionRootNodes();
-      a.force.start();
-      while (a.force.alpha() > 0.005) {
-        a.force.tick();
-      }
-      a.force.on("tick", a.layout.tick).start();
-      return a.elements.nodes.svg.attr('transform', function(id, i) {
-        return "translate(" + id.x + ", " + id.y + ")";
-      });
-    };
-  };
-
-  Alchemy.prototype.defaults = {
-    plugins: null,
-    renderer: "svg",
-    graphWidth: function() {
-      return d3.select(this.divSelector).node().parentElement.clientWidth;
-    },
-    graphHeight: function() {
-      if (d3.select(this.divSelector).node().parentElement.nodeName === "BODY") {
-        return window.innerHeight;
-      } else {
-        return d3.select(this.divSelector).node().parentElement.clientHeight;
-      }
-    },
-    alpha: 0.5,
-    collisionDetection: true,
-    nodeOverlap: 25,
-    fixNodes: false,
-    fixRootNodes: false,
-    forceLocked: true,
-    linkDistancefn: 'default',
-    nodePositions: null,
-    showEditor: false,
-    captionToggle: false,
-    toggleRootNodes: false,
-    removeElement: false,
-    cluster: false,
-    clusterKey: "cluster",
-    clusterColours: d3.shuffle(["#DD79FF", "#FFFC00", "#00FF30", "#5168FF", "#00C0FF", "#FF004B", "#00CDCD", "#f83f00", "#f800df", "#ff8d8f", "#ffcd00", "#184fff", "#ff7e00"]),
-    clusterControl: false,
-    nodeStats: false,
-    edgeStats: false,
-    edgeFilters: false,
-    nodeFilters: false,
-    edgesToggle: false,
-    nodesToggle: false,
-    zoomControls: false,
-    nodeCaption: 'caption',
-    nodeCaptionsOnByDefault: false,
-    nodeStyle: {
-      "all": {
-        "radius": 10,
-        "color": "#68B9FE",
-        "borderColor": "#127DC1",
-        "borderWidth": function(d, radius) {
-          return radius / 3;
-        },
-        "captionColor": "#FFFFFF",
-        "captionBackground": null,
-        "captionSize": 12,
-        "selected": {
-          "color": "#FFFFFF",
-          "borderColor": "#349FE3"
-        },
-        "highlighted": {
-          "color": "#EEEEFF"
-        },
-        "hidden": {
-          "color": "none",
-          "borderColor": "none"
-        }
-      }
-    },
-    nodeColour: null,
-    nodeMouseOver: 'caption',
-    nodeRadius: 10,
-    nodeTypes: null,
-    rootNodes: 'root',
-    rootNodeRadius: 15,
-    nodeClick: null,
-    edgeCaption: 'caption',
-    edgeCaptionsOnByDefault: false,
-    edgeStyle: {
-      "all": {
-        "width": 4,
-        "color": "#CCC",
-        "opacity": 0.2,
-        "directed": true,
-        "curved": true,
-        "selected": {
-          "opacity": 1
-        },
-        "highlighted": {
-          "opacity": 1
-        },
-        "hidden": {
-          "opacity": 0
-        }
-      }
-    },
-    edgeTypes: null,
-    curvedEdges: false,
-    edgeWidth: function() {
-      return 4;
-    },
-    edgeOverlayWidth: 20,
-    directedEdges: false,
-    edgeArrowSize: 5,
-    edgeClick: null,
-    search: false,
-    searchMethod: "contains",
-    backgroundColour: "#000000",
-    theme: null,
-    afterLoad: 'afterLoad',
-    divSelector: '#alchemy',
-    dataSource: null,
-    initialScale: 1,
-    initialTranslate: [0, 0],
-    scaleExtent: [0.5, 2.4],
-    exportSVG: false,
-    dataWarning: "default",
-    warningMessage: "There be no data!  What's going on?"
-  };
-
-  DrawEdge = function(instance) {
-    return {
-      a: instance,
-      createLink: function(edge) {
-        var conf;
-        conf = this.a.conf;
-        edge.append('path').attr('class', 'edge-line').attr('id', function(d) {
-          return "path-" + d.id;
-        });
-        edge.filter(function(d) {
-          return d.caption != null;
-        }).append('text');
-        return edge.append('path').attr('class', 'edge-handler').style('stroke-width', "" + conf.edgeOverlayWidth).style('opacity', "0");
-      },
-      styleLink: function(edge) {
-        var a, conf, utils;
-        a = this.a;
-        conf = this.a.conf;
-        utils = this.a.drawing.EdgeUtils;
-        return edge.each(function(d) {
-          var curve, curviness, edgeWalk, endx, endy, g, midpoint, startx, starty;
-          edgeWalk = utils.edgeWalk(d);
-          curviness = conf.curvedEdges ? 30 : 0;
-          curve = curviness / 10;
-          startx = d.source.radius + (d["stroke-width"] / 2);
-          starty = curviness / 10;
-          midpoint = edgeWalk.edgeLength / 2;
-          endx = edgeWalk.edgeLength - (d.target.radius - (d.target["stroke-width"] / 2));
-          endy = curviness / 10;
-          g = d3.select(this);
-          g.style(utils.edgeStyle(d));
-          g.attr('transform', "translate(" + d.source.x + ", " + d.source.y + ") rotate(" + edgeWalk.edgeAngle + ")");
-          g.select('.edge-line').attr('d', (function() {
-            var arrow, line, w;
-            line = "M" + startx + "," + starty + "q" + midpoint + "," + curviness + " " + endx + "," + endy;
-            if (conf.directedEdges) {
-              w = d["stroke-width"] * 2;
-              arrow = "l" + (-w) + "," + (w + curve) + " l" + w + "," + (-w - curve) + " l" + (-w) + "," + (-w + curve);
-              return line + arrow;
-            }
-            return line;
-          })());
-          return g.select('.edge-handler').attr('d', function(d) {
-            return g.select('.edge-line').attr('d');
-          });
-        });
-      },
-      classEdge: function(edge) {
-        return edge.classed('active', true);
-      },
-      styleText: function(edge) {
-        var conf, curved, utils;
-        conf = this.a.conf;
-        curved = conf.curvedEdges;
-        utils = this.a.drawing.EdgeUtils;
-        return edge.select('text').each(function(d) {
-          var dx, edgeWalk;
-          edgeWalk = utils.edgeWalk(d);
-          dx = edgeWalk.edgeLength / 2;
-          return d3.select(this).attr('dx', "" + dx).text(d.caption).attr("xlink:xlink:href", "#path-" + d.source.id + "-" + d.target.id).style("display", function(d) {
-            if (conf.edgeCaptionsOnByDefault) {
-              return "block";
-            }
-          });
-        });
-      },
-      setInteractions: function(edge) {
-        var interactions;
-        interactions = this.a.interactions;
-        return edge.select('.edge-handler').on('click', interactions.edgeClick).on('mouseover', function(d) {
-          return interactions.edgeMouseOver(d);
-        }).on('mouseout', function(d) {
-          return interactions.edgeMouseOut(d);
-        });
-      }
-    };
-  };
-
-  DrawEdges = function(instance) {
-    return {
-      a: instance,
-      createEdge: function(d3Edges) {
-        var drawEdge, edge;
-        drawEdge = this.a.drawing.DrawEdge;
-        edge = this.a.vis.selectAll("g.edge").data(d3Edges);
-        edge.enter().append('g').attr("id", function(d) {
-          return "edge-" + d.id + "-" + d.pos;
-        }).attr('class', function(d) {
-          return "edge " + d.edgeType;
-        }).attr('source-target', function(d) {
-          return "" + d.source.id + "-" + d.target.id;
-        });
-        drawEdge.createLink(edge);
-        drawEdge.classEdge(edge);
-        drawEdge.styleLink(edge);
-        drawEdge.styleText(edge);
-        drawEdge.setInteractions(edge);
-        edge.exit().remove();
-        if (this.a.conf.directedEdges && this.a.conf.curvedEdges) {
-          return edge.select('.edge-line').attr('marker-end', 'url(#arrow)');
-        }
-      },
-      updateEdge: function(d3Edge) {
-        var drawEdge, edge;
-        drawEdge = this.a.drawing.DrawEdge;
-        edge = this.a.vis.select("#edge-" + d3Edge.id + "-" + d3Edge.pos);
-        drawEdge.classEdge(edge);
-        drawEdge.styleLink(edge);
-        drawEdge.styleText(edge);
-        return drawEdge.setInteractions(edge);
-      }
-    };
-  };
-
-  DrawNode = function(instance) {
-    return {
-      a: instance,
-      styleText: function(node) {
-        var conf, nodes, utils;
-        conf = this.a.conf;
-        utils = this.a.drawing.NodeUtils;
-        nodes = this.a._nodes;
-        return node.selectAll("text").attr('dy', function(d) {
-          if (nodes[d.id].getProperties().root) {
-            return conf.rootNodeRadius / 2;
-          } else {
-            return conf.nodeRadius * 2 - 5;
-          }
-        }).attr('visibility', function(d) {
-          if (nodes[d.id]._state === "hidden") {
-            return "hidden";
-          } else {
-            return "visible";
-          }
-        }).text(function(d) {
-          return utils.nodeText(d);
-        }).style("display", function(d) {
-          if (conf.nodeCaptionsOnByDefault) {
-            return "block";
-          }
-        });
-      },
-      createNode: function(node) {
-        node = _.difference(node, node.select("circle").data());
-        node.__proto__ = d3.select().__proto__;
-        node.append('circle').attr('id', function(d) {
-          return "circle-" + d.id;
-        });
-        return node.append('svg:text').attr('id', function(d) {
-          return "text-" + d.id;
-        });
-      },
-      styleNode: function(node) {
-        var utils;
-        utils = this.a.drawing.NodeUtils;
-        return node.selectAll('circle').attr('r', function(d) {
-          if (typeof d.radius === "function") {
-            return d.radius();
-          } else {
-            return d.radius;
-          }
-        }).each(function(d) {
-          return d3.select(this).style(utils.nodeStyle(d));
-        });
-      },
-      setInteractions: function(node) {
-        var conf, coreInteractions, drag, editorEnabled, editorInteractions, nonRootNodes, rootNodes;
-        conf = this.a.conf;
-        coreInteractions = this.a.interactions;
-        editorEnabled = this.a.get.state("interactions") === "editor";
-        drag = d3.behavior.drag().origin(Object).on("dragstart", null).on("drag", null).on("dragend", null);
-        if (editorEnabled) {
-          editorInteractions = new this.a.editor.Interactions;
-          return node.on('mouseup', function(d) {
-            return editorInteractions.nodeMouseUp(d);
-          }).on('mouseover', function(d) {
-            return editorInteractions.nodeMouseOver(d);
-          }).on('mouseout', function(d) {
-            return editorInteractions.nodeMouseOut(d);
-          }).on('dblclick', function(d) {
-            return coreInteractions.nodeDoubleClick(d);
-          }).on('click', function(d) {
-            return editorInteractions.nodeClick(d);
-          });
-        } else {
-          node.on('mouseup', null).on('mouseover', function(d) {
-            return coreInteractions.nodeMouseOver(d);
-          }).on('mouseout', function(d) {
-            return coreInteractions.nodeMouseOut(d);
-          }).on('dblclick', function(d) {
-            return coreInteractions.nodeDoubleClick(d);
-          }).on('click', function(d) {
-            return coreInteractions.nodeClick(d);
-          });
-          drag = d3.behavior.drag().origin(Object).on("dragstart", coreInteractions.nodeDragStarted).on("drag", coreInteractions.nodeDragged).on("dragend", coreInteractions.nodeDragended);
-          if (!conf.fixNodes) {
-            nonRootNodes = node.filter(function(d) {
-              return d.root !== true;
-            });
-            nonRootNodes.call(drag);
-          }
-          if (!conf.fixRootNodes) {
-            rootNodes = node.filter(function(d) {
-              return d.root === true;
-            });
-            return rootNodes.call(drag);
-          }
-        }
-      }
-    };
-  };
-
-  DrawNodes = function(instance) {
-    return {
-      a: instance,
-      createNode: function(d3Nodes) {
-        var drawNode, node;
-        drawNode = this.a.drawing.DrawNode;
-        node = this.a.vis.selectAll("g.node").data(d3Nodes, function(n) {
-          return n.id;
-        });
-        node.enter().append("g").attr("class", function(d) {
-          var nodeType;
-          nodeType = d.self._nodeType;
-          return "node " + nodeType + " active";
-        }).attr('id', function(d) {
-          return "node-" + d.id;
-        }).classed('root', function(d) {
-          return d.root;
-        });
-        drawNode.createNode(node);
-        drawNode.styleNode(node);
-        drawNode.styleText(node);
-        drawNode.setInteractions(node);
-        return node.exit().remove();
-      },
-      updateNode: function(alchemyNode) {
-        var drawNode, node;
-        drawNode = this.a.drawing.DrawNode;
-        node = this.a.vis.select("#node-" + alchemyNode.id);
-        drawNode.styleNode(node);
-        drawNode.styleText(node);
-        return drawNode.setInteractions(node);
-      }
-    };
-  };
-
-  Alchemy.prototype.EdgeUtils = function(instance) {
-    return {
-      a: instance,
-      edgeStyle: function(d) {
-        var clustering, conf, edge, nodes, styles;
-        conf = this.a.conf;
-        edge = this.a._edges[d.id][d.pos];
-        styles = this.a.svgStyles.edge.update(edge);
-        nodes = this.a._nodes;
-        if (this.a.conf.cluster) {
-          clustering = this.a.layout._clustering;
-          styles.stroke = (function(d) {
-            var clusterKey, gid, id, index, source, target;
-            clusterKey = conf.clusterKey;
-            source = nodes[d.source.id]._properties;
-            target = nodes[d.target.id]._properties;
-            if (source.root || target.root) {
-              index = source.root ? target[clusterKey] : source[clusterKey];
-              return "" + (clustering.getClusterColour(index));
-            } else if (source[clusterKey] === target[clusterKey]) {
-              index = source[clusterKey];
-              return "" + (clustering.getClusterColour(index));
-            } else if (source[clusterKey] !== target[clusterKey]) {
-              id = "" + source[clusterKey] + "-" + target[clusterKey];
-              gid = "cluster-gradient-" + id;
-              return "url(#" + gid + ")";
-            }
-          })(d);
-        }
-        return styles;
-      },
-      triangle: function(edge) {
-        var height, hyp, width;
-        width = edge.target.x - edge.source.x;
-        height = edge.target.y - edge.source.y;
-        hyp = Math.sqrt(height * height + width * width);
-        return [width, height, hyp];
-      },
-      edgeWalk: function(edge) {
-        var curveOffset, edgeLength, edgeWidth, height, hyp, startPathX, width, _ref;
-        _ref = this.triangle(edge), width = _ref[0], height = _ref[1], hyp = _ref[2];
-        edgeWidth = edge['stroke-width'];
-        curveOffset = 2;
-        startPathX = edge.source.radius + edge.source['stroke-width'] - (edgeWidth / 2) + curveOffset;
-        edgeLength = hyp - startPathX - curveOffset * 1.5;
-        return {
-          edgeAngle: Math.atan2(height, width) / Math.PI * 180,
-          edgeLength: edgeLength
-        };
-      },
-      middleLine: function(edge) {
-        return this.curvedDirectedEdgeWalk(edge, 'middle');
-      },
-      startLine: function(edge) {
-        return this.curvedDirectedEdgeWalk(edge, 'linkStart');
-      },
-      endLine: function(edge) {
-        return this.curvedDirectedEdgeWalk(edge, 'linkEnd');
-      },
-      edgeLength: function(edge) {
-        var height, hyp, width;
-        width = edge.target.x - edge.source.x;
-        height = edge.target.y - edge.source.y;
-        return hyp = Math.sqrt(height * height + width * width);
-      },
-      edgeAngle: function(edge) {
-        var height, width;
-        width = edge.target.x - edge.source.x;
-        height = edge.target.y - edge.source.y;
-        return Math.atan2(height, width) / Math.PI * 180;
-      },
-      captionAngle: function(angle) {
-        if (angle < -90 || angle > 90) {
-          return 180;
-        } else {
-          return 0;
-        }
-      },
-      middlePath: function(edge) {
-        var midPoint, pathNode;
-        pathNode = this.a.vis.select("#path-" + edge.id).node();
-        midPoint = pathNode.getPointAtLength(pathNode.getTotalLength() / 2);
-        return {
-          x: midPoint.x,
-          y: midPoint.y
-        };
-      },
-      middlePathCurve: function(edge) {
-        var midPoint, pathNode;
-        pathNode = d3.select("#path-" + edge.id).node();
-        midPoint = pathNode.getPointAtLength(pathNode.getTotalLength() / 2);
-        return {
-          x: midPoint.x,
-          y: midPoint.y
-        };
-      }
-    };
-  };
-
-  Alchemy.prototype.NodeUtils = function(instance) {
-    var a;
-    a = instance;
-    return {
-      nodeStyle: function(d) {
-        var conf, node;
-        conf = a.conf;
-        node = d.self;
-        if (conf.cluster && (node._state !== "hidden")) {
-          d.fill = (function(d) {
-            var clusterMap, clustering, colour, colourIndex, colours, key, nodeProp;
-            clustering = a.layout._clustering;
-            nodeProp = node.getProperties();
-            clusterMap = clustering.clusterMap;
-            key = conf.clusterKey;
-            colours = conf.clusterColours;
-            colourIndex = clusterMap[nodeProp[key]] % colours.length;
-            colour = colours[colourIndex];
-            return "" + colour;
-          })(d);
-          d.stroke = d.fill;
-        }
-        return d;
-      },
-      nodeText: function(d) {
-        var caption, conf, nodeProps;
-        conf = a.conf;
-        nodeProps = a._nodes[d.id]._properties;
-        if (conf.nodeCaption && typeof conf.nodeCaption === 'string') {
-          if (nodeProps[conf.nodeCaption] != null) {
-            return nodeProps[conf.nodeCaption];
-          } else {
-            return '';
-          }
-        } else if (conf.nodeCaption && typeof conf.nodeCaption === 'function') {
-          caption = conf.nodeCaption(nodeProps);
-          if (caption === void 0 || String(caption) === 'undefined') {
-            a.log["caption"] = "At least one caption returned undefined";
-            conf.caption = false;
-          }
-          return caption;
-        }
-      }
-    };
-  };
-
-  Alchemy.prototype.svgStyles = function(instance) {
-    return {
-      a: instance,
-      node: {
-        a: this.a,
-        populate: function(node) {
-          var conf, d, defaultStyle, fill, nodeType, nodeTypeKey, radius, stroke, strokeWidth, style, svgStyles, toFunc, typedStyle;
-          conf = this.a.conf;
-          defaultStyle = _.omit(conf.nodeStyle.all, "selected", "highlighted", "hidden");
-          d = node;
-          toFunc = function(inp) {
-            if (typeof inp === "function") {
-              return inp;
-            }
-            return function() {
-              return inp;
-            };
-          };
-          nodeTypeKey = _.keys(conf.nodeTypes)[0];
-          nodeType = node.getProperties()[nodeTypeKey];
-          if (conf.nodeStyle[nodeType] === void 0) {
-            nodeType = "all";
-          }
-          typedStyle = _.assign(_.cloneDeep(defaultStyle), conf.nodeStyle[nodeType]);
-          style = _.assign(typedStyle, conf.nodeStyle[nodeType][node._state]);
-          radius = toFunc(style.radius);
-          fill = toFunc(style.color);
-          stroke = toFunc(style.borderColor);
-          strokeWidth = toFunc(style.borderWidth);
-          svgStyles = {};
-          svgStyles["radius"] = radius(d);
-          svgStyles["fill"] = fill(d);
-          svgStyles["stroke"] = stroke(d);
-          svgStyles["stroke-width"] = strokeWidth(d, radius(d));
-          return svgStyles;
-        }
-      },
-      edge: {
-        a: this.a,
-        populate: function(edge) {
-          var color, conf, defaultStyle, edgeType, opacity, style, svgStyles, toFunc, typedStyle, width;
-          conf = this.a.conf;
-          defaultStyle = _.omit(conf.edgeStyle.all, "selected", "highlighted", "hidden");
-          toFunc = function(inp) {
-            if (typeof inp === "function") {
-              return inp;
-            }
-            return function() {
-              return inp;
-            };
-          };
-          edgeType = edge._edgeType;
-          if (conf.edgeStyle[edgeType] === void 0) {
-            edgeType = "all";
-          }
-          typedStyle = _.assign(_.cloneDeep(defaultStyle), conf.edgeStyle[edgeType]);
-          style = _.assign(typedStyle, conf.edgeStyle[edgeType][edge._state]);
-          width = toFunc(style.width);
-          color = toFunc(style.color);
-          opacity = toFunc(style.opacity);
-          svgStyles = {
-            "stroke": color(edge),
-            "stroke-width": width(edge),
-            "opacity": opacity(edge),
-            "fill": "none"
-          };
-          return svgStyles;
-        },
-        update: function(edge) {
-          var color, conf, opacity, style, svgStyles, toFunc, width;
-          conf = this.a.conf;
-          style = edge._style;
-          toFunc = function(inp) {
-            if (typeof inp === "function") {
-              return inp;
-            }
-            return function() {
-              return inp;
-            };
-          };
-          width = toFunc(style.width);
-          color = toFunc(style.color);
-          opacity = toFunc(style.opacity);
-          svgStyles = {
-            "stroke": color(edge),
-            "stroke-width": width(edge),
-            "opacity": opacity(edge),
-            "fill": "none"
-          };
-          return svgStyles;
-        }
-      }
-    };
-  };
-
-  Editor = (function() {
-    function Editor() {
-      this.nodeEditor = __bind(this.nodeEditor, this);
-      this.startEditor = __bind(this.startEditor, this);
-      this.utils = new alchemy.editor.Utils;
-    }
-
-    Editor.prototype.editorContainerHTML = "<div id=\"editor-header\" data-toggle=\"collapse\" data-target=\"#editor #element-options\">\n    <h3>Editor</h3><span class=\"fa fa-2x fa-caret-right\"></span>\n</div>\n<div id=\"element-options\" class=\"collapse\">\n    <ul class=\"list-group\"> \n        <li class=\"list-group-item\" id=\"remove\">Remove Selected</li> \n        <li class=\"list-group-item\" id=\"editor-interactions\">Editor mode enabled, click to disable editor interactions</li>\n    </ul>\n</div>";
-
-    Editor.prototype.elementEditorHTML = function(type) {
-      return "<h4>" + type + " Editor</h4>\n<form id=\"add-property-form\">\n    <div id=\"add-property\">\n        <input class=\"form-control\" id=\"add-prop-key\" placeholder=\"New Property Name\">\n        <input class=\"form-control\" id=\"add-prop-value\" placeholder=\"New Property Value\">\n    </div>\n    <input id=\"add-prop-submit\" type=\"submit\" value=\"Add Property\" placeholder=\"add a property to this node\">\n</form>\n<form id=\"properties-list\">\n    <input id=\"update-properties\" type=\"submit\" value=\"Update Properties\">\n</form>";
-    };
-
-    Editor.prototype.startEditor = function() {
-      var divSelector, editor, editor_interactions, html, utils;
-      divSelector = alchemy.conf.divSelector;
-      html = this.editorContainerHTML;
-      editor = alchemy.dash.select("#control-dash").append("div").attr("id", "editor").html(html);
-      editor.select('#editor-header').on('click', function() {
-        if (alchemy.dash.select('#element-options').classed("in")) {
-          return alchemy.dash.select("#editor-header>span").attr("class", "fa fa-2x fa-caret-right");
-        } else {
-          return alchemy.dash.select("#editor-header>span").attr("class", "fa fa-2x fa-caret-down");
-        }
-      });
-      editor_interactions = editor.select('#element-options ul #editor-interactions').on('click', function() {
-        return d3.select(this).attr("class", function() {
-          if (alchemy.get.state() === 'editor') {
-            alchemy.set.state('interactions', 'default');
-            return "inactive list-group-item";
-          } else {
-            alchemy.set.state('interactions', 'editor');
-            return "active list-group-item";
-          }
-        }).html(function() {
-          if (alchemy.get.state() === 'editor') {
-            return "Disable Editor Interactions";
-          } else {
-            return "Enable Editor Interactions";
-          }
-        });
-      });
-      editor.select("#element-options ul #remove").on("click", function() {
-        return alchemy.editor.remove();
-      });
-      utils = this.utils;
-      return editor_interactions.on("click", function() {
-        if (!alchemy.dash.select("#editor-interactions").classed("active")) {
-          utils.enableEditor();
-          return alchemy.dash.select("#editor-interactions").classed({
-            "active": true,
-            "inactive": false
-          }).html("Editor mode enabled, click to disable editor interactions");
-        } else {
-          utils.disableEditor();
-          return alchemy.dash.select("#editor-interactions").classed({
-            "active": false,
-            "inactive": true
-          }).html("Editor mode disabled, click to enable editor interactions");
-        }
-      });
-    };
-
-    Editor.prototype.nodeEditor = function(n) {
-      var add_property, divSelector, editor, elementEditor, html, nodeProperties, node_property, options, property, property_list, updateProperty, val;
-      divSelector = alchemy.conf.divSelector;
-      editor = alchemy.dash.select("#control-dash #editor");
-      options = editor.select('#element-options');
-      html = this.elementEditorHTML("Node");
-      elementEditor = options.append('div').attr('id', 'node-editor').html(html);
-      elementEditor.attr("class", function() {
-        var active;
-        active = alchemy.dash.select("#editor-interactions").classed("active");
-        if (active) {
-          return "enabled";
-        }
-        return "hidden";
-      });
-      add_property = editor.select("#node-editor form #add-property");
-      add_property.select("#node-add-prop-key").attr("placeholder", "New Property Name").attr("value", null);
-      add_property.select("#node-add-prop-value").attr("placeholder", "New Property Value").attr("value", null);
-      alchemy.dash.select("#add-property-form").on("submit", function() {
-        var key, value;
-        event.preventDefault();
-        key = alchemy.dash.select('#add-prop-key').property('value');
-        key = key.replace(/\s/g, "_");
-        value = alchemy.dash.select('#add-prop-value').property('value');
-        updateProperty(key, value, true);
-        alchemy.dash.selectAll("#add-property .edited-property").classed({
-          "edited-property": false
-        });
-        return this.reset();
-      });
-      nodeProperties = alchemy._nodes[n.id].getProperties();
-      alchemy.vis.select("#node-" + n.id).classed({
-        "editing": true
-      });
-      property_list = editor.select("#node-editor #properties-list");
-      for (property in nodeProperties) {
-        val = nodeProperties[property];
-        node_property = property_list.append("div").attr("id", "node-" + property).attr("class", "property form-inline form-group");
-        node_property.append("label").attr("for", "node-" + property + "-input").attr("class", "form-control property-name").text("" + property);
-        node_property.append("input").attr("id", "node-" + property + "-input").attr("class", "form-control property-value").attr("value", "" + val);
-      }
-      alchemy.dash.select("#properties-list").on("submit", function() {
-        var key, properties, selection, value, _i, _len, _ref;
-        event.preventDefault();
-        properties = alchemy.dash.selectAll(".edited-property");
-        _ref = properties[0];
-        for (_i = 0, _len = _ref.length; _i < _len; _i++) {
-          property = _ref[_i];
-          selection = alchemy.dash.select(property);
-          key = selection.select("label").text();
-          value = selection.select("input").attr('value');
-          updateProperty(key, value, false);
-        }
-        alchemy.dash.selectAll("#node-properties-list .edited-property").classed({
-          "edited-property": false
-        });
-        return this.reset();
-      });
-      d3.selectAll("#add-prop-key, #add-prop-value, .property").on("keydown", function() {
-        if (d3.event.keyCode === 13) {
-          event.preventDefault();
-        }
-        return d3.select(this).classed({
-          "edited-property": true
-        });
-      });
-      return updateProperty = function(key, value, newProperty) {
-        var drawNodes, nodeID;
-        nodeID = n.id;
-        if ((key !== "") && (value !== "")) {
-          alchemy._nodes[nodeID].setProperty("" + key, "" + value);
-          drawNodes = alchemy._drawNodes;
-          drawNodes.updateNode(alchemy.viz.select("#node-" + nodeID));
-          if (newProperty === true) {
-            alchemy.dash.select("#node-add-prop-key").attr("value", "property added/updated to key: " + key);
-            return alchemy.dash.select("#node-add-prop-value").attr("value", "property at " + key + " updated to: " + value);
-          } else {
-            return alchemy.dash.select("#node-" + key + "-input").attr("value", "property at " + key + " updated to: " + value);
-          }
-        } else {
-          if (newProperty === true) {
-            alchemy.dash.select("#node-add-prop-key").attr("value", "null or invalid input");
-            return alchemy.dash.select("#node-add-prop-value").attr("value", "null or invlid input");
-          } else {
-            return alchemy.dash.select("#node-" + key + "-input").attr("value", "null or invalid input");
-          }
-        }
-      };
-    };
-
-    Editor.prototype.editorClear = function() {
-      alchemy.dash.selectAll(".node").classed({
-        "editing": false
-      });
-      alchemy.dash.selectAll(".edge").classed({
-        "editing": false
-      });
-      alchemy.dash.select("#node-editor").remove();
-      alchemy.dash.select("#edge-editor").remove();
-      return alchemy.dash.select("#node-add-prop-submit").attr("placeholder", function() {
-        if (alchemy.vis.selectAll(".selected").empty()) {
-          return "select a node or edge to edit properties";
-        }
-        return "add a property to this element";
-      });
-    };
-
-    Editor.prototype.edgeEditor = function(e) {
-      var add_property, divSelector, edgeProperties, edge_property, editor, elementEditor, html, options, property, property_list, updateProperty, val;
-      divSelector = alchemy.conf.divSelector;
-      editor = alchemy.dash("#control-dash #editor");
-      options = editor.select('#element-options');
-      html = this.elementEditorHTML("Edge");
-      elementEditor = options.append('div').attr('id', 'edge-editor').html(html);
-      elementEditor.attr("class", function() {
-        if (alchemy.dash.select("#editor-interactions").classed("active")) {
-          return "enabled";
-        }
-        return "hidden";
-      });
-      add_property = editor.select("#edge-editor form #add-property");
-      add_property.select("#add-prop-key").attr("placeholder", "New Property Name").attr("value", null);
-      add_property.select("#add-prop-value").attr("placeholder", "New Property Value").attr("value", null);
-      edgeProperties = alchemy._edges[e.id].getProperties();
-      alchemy.vis.select("#edge-" + e.id).classed({
-        "editing": true
-      });
-      property_list = editor.select("#edge-editor #properties-list");
-      for (property in edgeProperties) {
-        val = edgeProperties[property];
-        edge_property = property_list.append("div").attr("id", "edge-" + property).attr("class", "property form-inline form-group");
-        edge_property.append("label").attr("for", "edge-" + property + "-input").attr("class", "form-control property-name").text("" + property);
-        edge_property.append("input").attr("id", "edge-" + property + "-input").attr("class", "form-control property-value").attr("value", "" + val);
-      }
-      alchemy.dash.selectAll("#add-prop-key, #add-prop-value, .property").on("keydown", function() {
-        if (d3.event.keyCode === 13) {
-          event.preventDefault();
-        }
-        return d3.select(this).classed({
-          "edited-property": true
-        });
-      });
-      alchemy.dash.select("#add-property-form").on("submit", function() {
-        var key, value;
-        event.preventDefault();
-        key = alchemy.dash.select("#add-prop-key").property('value');
-        key = key.replace(/\s/g, "_");
-        value = alchemy.dash.select("#add-prop-value").property('value');
-        updateProperty(key, value, true);
-        alchemy.dash.selectAll("#add-property .edited-property").classed({
-          "edited-property": false
-        });
-        return this.reset();
-      });
-      d3.select("#properties-list").on("submit", function() {
-        var key, properties, selection, value, _i, _len, _ref;
-        event.preventDefault();
-        propertie

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