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Posted to jira@arrow.apache.org by "Yi Hsiao (Jira)" <ji...@apache.org> on 2020/12/10 00:06:00 UTC
[jira] [Comment Edited] (ARROW-10856) [R] Can't get the required C++ run time library installed correctly

    [ https://issues.apache.org/jira/browse/ARROW-10856?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=17246911#comment-17246911 ] 

Yi Hsiao edited comment on ARROW-10856 at 12/10/20, 12:05 AM:
--------------------------------------------------------------

 

[~npr] Full log is here and it seems to me that the correct compiler is actually used. I am kind of confused.
{code:java}
> arrow::install_arrow()
Installing package into ‘/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0’
(as ‘lib’ is unspecified)
trying URL 'https://cloud.r-project.org/src/contrib/arrow_2.0.0.tar.gz'
Content type 'application/x-gzip' length 322592 bytes (315 KB)
==================================================
downloaded 315 KB
* installing *source* package ‘arrow’ ...
** package ‘arrow’ successfully unpacked and MD5 sums checked
** using staged installation
trying URL 'https://dl.bintray.com/ursalabs/arrow-r/libarrow/bin/centos-7/arrow-2.0.0.zip'
Error in download.file(from_url, to_file, quiet = quietly) :
 cannot open URL 'https://dl.bintray.com/ursalabs/arrow-r/libarrow/bin/centos-7/arrow-2.0.0.zip'
*** No C++ binaries found for centos-7
trying URL 'https://dl.bintray.com/ursalabs/arrow-r/libarrow/src/arrow-2.0.0.zip'
Error in download.file(from_url, to_file, quiet = quietly) :
 cannot open URL 'https://dl.bintray.com/ursalabs/arrow-r/libarrow/src/arrow-2.0.0.zip'
trying URL 'https://www.apache.org/dyn/closer.lua?action=download&filename=arrow/arrow-2.0.0/apache-arrow-2.0.0.tar.gz'
Content type 'application/x-gzip' length 7530266 bytes (7.2 MB)
==================================================
downloaded 7.2 MB
*** Successfully retrieved C++ source
*** Building C++ libraries
*** Building with MAKEFLAGS= -j2
**** cmake
trying URL 'https://github.com/Kitware/CMake/releases/download/v3.18.1/cmake-3.18.1-Linux-x86_64.tar.gz'
Content type 'application/octet-stream' length 41750973 bytes (39.8 MB)
==================================================
downloaded 39.8 MB
**** S3 support not available for gcc < 4.9; building with ARROW_S3=OFF
**** arrow with SOURCE_DIR="/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp" BUILD_DIR="/tmp/Rtmp65d0fd/file25c9fe7f169a" DEST_DIR="libarrow/arrow-2.0.0" CMAKE="/tmp/Rtmp65d0fd/file2
5c9f44ecaba6/cmake-3.18.1-Linux-x86_64/bin/cmake" CC="gcc" CXX="g++ -std=gnu++11" LDFLAGS="-L/usr/local/lib64" ARROW_S3=OFF
++ pwd
+ : /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow
+ : /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp
+ : /tmp/Rtmp65d0fd/file25c9fe7f169a
+ : libarrow/arrow-2.0.0
+ : /tmp/Rtmp65d0fd/file25c9f44ecaba6/cmake-3.18.1-Linux-x86_64/bin/cmake
++ cd /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp
++ pwd
+ SOURCE_DIR=/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp
++ mkdir -p libarrow/arrow-2.0.0
++ cd libarrow/arrow-2.0.0
++ pwd
+ DEST_DIR=/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0
+ '[' '' = '' ']'
+ which ninja
+ '[' false = false ']'
+ ARROW_DEFAULT_PARAM=ON
+ mkdir -p /tmp/Rtmp65d0fd/file25c9fe7f169a
+ pushd /tmp/Rtmp65d0fd/file25c9fe7f169a
/tmp/Rtmp65d0fd/file25c9fe7f169a /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow
+ /tmp/Rtmp65d0fd/file25c9f44ecaba6/cmake-3.18.1-Linux-x86_64/bin/cmake -DARROW_BOOST_USE_SHARED=OFF -DARROW_BUILD_TESTS=OFF -DARROW_BUILD_SHARED=OFF -DARROW_BUILD_STATIC=ON -DARROW_COMPUTE=ON -DARROW_CSV=ON -DARROW_DATASET=ON -DARROW_DEPENDENCY_SOURCE=BUNDLED -DARROW_FILESYSTEM=ON -DARROW_JEMALLOC=ON -DARROW_JSON=ON -DARROW_PARQUET=ON -DARROW_S3=OFF -DARROW_WITH_BROTLI=ON -DARROW_WITH_BZ2=ON -DARROW_WITH_LZ4=ON -DARROW_WITH_SNAPPY=ON -DARROW_WITH_UTF8PROC=OFF -DARROW_WITH_ZLIB=ON -DARROW_WITH_ZSTD=ON -DCMAKE_BUILD_TYPE=Release -DCMAKE_INSTALL_LIBDIR=lib -DCMAKE_INSTALL_PREFIX=/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0 -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_UNITY_BUILD=ON -G 'Unix Makefiles' /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp
-- Building using CMake version: 3.18.1
-- The C compiler identification is GNU 8.2.0
-- The CXX compiler identification is GNU 8.2.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /sw/arcts/centos7/gcc/8.2.0/bin/gcc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /sw/arcts/centos7/gcc/8.2.0/bin/g++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Arrow version: 2.0.0 (full: '2.0.0')
-- Arrow SO version: 200 (full: 200.0.0)
-- clang-tidy not found
-- clang-format not found
-- Could NOT find ClangTools (missing: CLANG_FORMAT_BIN CLANG_TIDY_BIN)
-- infer not found
fatal: Not a git repository (or any parent up to mount point /tmp)
Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set).
-- Found Python3: /usr/bin/python3.6 (found version "3.6.8") found components: Interpreter
-- Found cpplint executable at /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/build-support/cpplint.py
-- System processor: x86_64
-- Performing Test CXX_SUPPORTS_SSE4_2
-- Performing Test CXX_SUPPORTS_SSE4_2 - Success
-- Performing Test CXX_SUPPORTS_AVX2
-- Performing Test CXX_SUPPORTS_AVX2 - Success
-- Performing Test CXX_SUPPORTS_AVX512
-- Performing Test CXX_SUPPORTS_AVX512 - Success
-- Arrow build warning level: PRODUCTION
Using ld linker
Configured for RELEASE build (set with cmake -DCMAKE_BUILD_TYPE={release,debug,...})
-- Build Type: RELEASE
-- Using BUNDLED approach to find dependencies
-- ARROW_ABSL_BUILD_VERSION: 2eba343b51e0923cd3fb919a6abd6120590fc059
-- ARROW_AWSSDK_BUILD_VERSION: 1.8.57
-- ARROW_AWS_CHECKSUMS_BUILD_VERSION: v0.1.5
-- ARROW_AWS_C_COMMON_BUILD_VERSION: v0.4.59
-- ARROW_AWS_C_EVENT_STREAM_BUILD_VERSION: v0.1.5
-- ARROW_BOOST_BUILD_VERSION: 1.71.0
-- ARROW_BROTLI_BUILD_VERSION: v1.0.7
-- ARROW_BZIP2_BUILD_VERSION: 1.0.8
-- ARROW_CARES_BUILD_VERSION: 1.16.1
-- ARROW_GBENCHMARK_BUILD_VERSION: v1.5.1
-- ARROW_GFLAGS_BUILD_VERSION: v2.2.2
-- ARROW_GLOG_BUILD_VERSION: v0.4.0
-- ARROW_GRPC_BUILD_VERSION: v1.29.1
-- ARROW_GTEST_BUILD_VERSION: 1.8.1
-- ARROW_JEMALLOC_BUILD_VERSION: 5.2.1
-- ARROW_LZ4_BUILD_VERSION: v1.9.2
-- ARROW_MIMALLOC_BUILD_VERSION: v1.6.4
-- ARROW_ORC_BUILD_VERSION: 1.6.2
-- ARROW_PROTOBUF_BUILD_VERSION: v3.12.1
-- ARROW_RAPIDJSON_BUILD_VERSION: 1a803826f1197b5e30703afe4b9c0e7dd48074f5
-- ARROW_RE2_BUILD_VERSION: 2019-08-01
-- ARROW_SNAPPY_BUILD_VERSION: 1.1.8
-- ARROW_THRIFT_BUILD_VERSION: 0.12.0
-- ARROW_THRIFT_BUILD_MD5_CHECKSUM: 3deebbb4d1ca77dd9c9e009a1ea02183
-- ARROW_UTF8PROC_BUILD_VERSION: v2.5.0
-- ARROW_ZLIB_BUILD_VERSION: 1.2.11
-- ARROW_ZSTD_BUILD_VERSION: v1.4.5
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed
-- Check if compiler accepts -pthread
-- Check if compiler accepts -pthread - yes
-- Found Threads: TRUE
-- Added static library dependency boost_system_static: /tmp/Rtmp65d0fd/file25c9fe7f169a/boost_ep-prefix/src/boost_ep/stage/lib/libboost_system.a
-- Added static library dependency boost_filesystem_static: /tmp/Rtmp65d0fd/file25c9fe7f169a/boost_ep-prefix/src/boost_ep/stage/lib/libboost_filesystem.a
-- Added static library dependency boost_regex_static: /tmp/Rtmp65d0fd/file25c9fe7f169a/boost_ep-prefix/src/boost_ep/stage/lib/libboost_regex.a
-- Boost include dir: /tmp/Rtmp65d0fd/file25c9fe7f169a/boost_ep-prefix/src/boost_ep
-- Boost libraries: boost_system_static;boost_filesystem_static
-- Building snappy from source
-- Building brotli from source
-- Building without OpenSSL support. Minimum OpenSSL version 1.0.2 required.
Building Apache Thrift from source
-- Building (vendored) jemalloc from source
-- Building rapidjson from source
-- Building ZLIB from source
-- Building lz4 from source
-- Building zstd from source
-- Building BZip2 from source
-- Found hdfs.h at: /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/thirdparty/hadoop/include/hdfs.h
-- All bundled static libraries: boost_system_static;boost_filesystem_static;boost_regex_static;Snappy::snappy;Brotli::brotlicommon;Brotli::brotlienc;Brotli::brotlidec;thrift::thrift;jemalloc::jemalloc;ZLIB::ZLIB;LZ4::lz4;zstd::libzstd;BZip2::BZip2
-- CMAKE_C_FLAGS: -O3 -DNDEBUG -Wall -fno-semantic-interposition -msse4.2
-- CMAKE_CXX_FLAGS: -Wno-noexcept-type -Wno-subobject-linkage -fdiagnostics-color=always -O3 -DNDEBUG -Wall -fno-semantic-interposition -msse4.2
-- Looking for backtrace
-- Looking for backtrace - found
-- backtrace facility detected in default set of libraries
-- Found Backtrace: /usr/include
-- Creating bundled static library target arrow_bundled_dependencies at /tmp/Rtmp65d0fd/file25c9fe7f169a/release/libarrow_bundled_dependencies.a
-- ---------------------------------------------------------------------
-- Arrow version: 2.0.0
--
-- Build configuration summary:
-- Generator: Unix Makefiles
-- Build type: RELEASE
-- Source directory: /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp
-- Install prefix: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0
--
-- Compile and link options:
--
-- ARROW_CXXFLAGS="" [default=""]
-- Compiler flags to append when compiling Arrow
-- ARROW_BUILD_STATIC=ON [default=ON]
-- Build static libraries
-- ARROW_BUILD_SHARED=OFF [default=ON]
-- Build shared libraries
-- ARROW_PACKAGE_KIND="" [default=""]
-- Arbitrary string that identifies the kind of package
-- (for informational purposes)
-- ARROW_GIT_ID="" [default=""]
-- The Arrow git commit id (if any)
-- ARROW_GIT_DESCRIPTION="" [default=""]
-- The Arrow git commit description (if any)
-- ARROW_NO_DEPRECATED_API=OFF [default=OFF]
-- Exclude deprecated APIs from build
-- ARROW_USE_CCACHE=ON [default=ON]
-- Use ccache when compiling (if available)
-- ARROW_USE_LD_GOLD=OFF [default=OFF]
-- Use ld.gold for linking on Linux (if available)
-- ARROW_USE_PRECOMPILED_HEADERS=OFF [default=OFF]
-- Use precompiled headers when compiling
-- ARROW_SIMD_LEVEL=SSE4_2 [default=NONE|SSE4_2|AVX2|AVX512]
-- Compile-time SIMD optimization level
-- ARROW_RUNTIME_SIMD_LEVEL=MAX [default=NONE|SSE4_2|AVX2|AVX512|MAX]
-- Max runtime SIMD optimization level
-- ARROW_ARMV8_ARCH=armv8-a [default=armv8-a|armv8-a+crc+crypto]
-- Arm64 arch and extensions
-- ARROW_ALTIVEC=ON [default=ON]
-- Build with Altivec if compiler has support
-- ARROW_RPATH_ORIGIN=OFF [default=OFF]
-- Build Arrow libraries with RATH set to $ORIGIN
-- ARROW_INSTALL_NAME_RPATH=ON [default=ON]
-- Build Arrow libraries with install_name set to @rpath
-- ARROW_GGDB_DEBUG=ON [default=ON]
-- Pass -ggdb flag to debug builds
--
-- Test and benchmark options:
--
-- ARROW_BUILD_EXAMPLES=OFF [default=OFF]
-- Build the Arrow examples
-- ARROW_BUILD_TESTS=OFF [default=OFF]
-- Build the Arrow googletest unit tests
-- ARROW_ENABLE_TIMING_TESTS=ON [default=ON]
-- Enable timing-sensitive tests
-- ARROW_BUILD_INTEGRATION=OFF [default=OFF]
-- Build the Arrow integration test executables
-- ARROW_BUILD_BENCHMARKS=OFF [default=OFF]
-- Build the Arrow micro benchmarks
-- ARROW_BUILD_BENCHMARKS_REFERENCE=OFF [default=OFF]
-- Build the Arrow micro reference benchmarks
-- ARROW_TEST_LINKAGE=static [default=shared|static]
-- Linkage of Arrow libraries with unit tests executables.
-- ARROW_FUZZING=OFF [default=OFF]
-- Build Arrow Fuzzing executables
-- ARROW_LARGE_MEMORY_TESTS=OFF [default=OFF]
-- Enable unit tests which use large memory
--
-- Lint options:
--
-- ARROW_ONLY_LINT=OFF [default=OFF]
-- Only define the lint and check-format targets
-- ARROW_VERBOSE_LINT=OFF [default=OFF]
-- If off, 'quiet' flags will be passed to linting tools
-- ARROW_GENERATE_COVERAGE=OFF [default=OFF]
-- Build with C++ code coverage enabled
--
-- Checks options:
--
-- ARROW_TEST_MEMCHECK=OFF [default=OFF]
-- Run the test suite using valgrind --tool=memcheck
-- ARROW_USE_ASAN=OFF [default=OFF]
-- Enable Address Sanitizer checks
-- ARROW_USE_TSAN=OFF [default=OFF]
-- Enable Thread Sanitizer checks
-- ARROW_USE_UBSAN=OFF [default=OFF]
-- Enable Undefined Behavior sanitizer checks
--
-- Project component options:
--
-- ARROW_BUILD_UTILITIES=OFF [default=OFF]
-- Build Arrow commandline utilities
-- ARROW_COMPUTE=ON [default=OFF]
-- Build the Arrow Compute Modules
-- ARROW_CSV=ON [default=OFF]
-- Build the Arrow CSV Parser Module
-- ARROW_CUDA=OFF [default=OFF]
-- Build the Arrow CUDA extensions (requires CUDA toolkit)
-- ARROW_DATASET=ON [default=OFF]
-- Build the Arrow Dataset Modules
-- ARROW_FILESYSTEM=ON [default=OFF]
-- Build the Arrow Filesystem Layer
-- ARROW_FLIGHT=OFF [default=OFF]
-- Build the Arrow Flight RPC System (requires GRPC, Protocol Buffers)
-- ARROW_GANDIVA=OFF [default=OFF]
-- Build the Gandiva libraries
-- ARROW_HDFS=OFF [default=OFF]
-- Build the Arrow HDFS bridge
-- ARROW_HIVESERVER2=OFF [default=OFF]
-- Build the HiveServer2 client and Arrow adapter
-- ARROW_IPC=ON [default=ON]
-- Build the Arrow IPC extensions
-- ARROW_JEMALLOC=ON [default=ON]
-- Build the Arrow jemalloc-based allocator
-- ARROW_JNI=OFF [default=OFF]
-- Build the Arrow JNI lib
-- ARROW_JSON=ON [default=OFF]
-- Build Arrow with JSON support (requires RapidJSON)
-- ARROW_MIMALLOC=OFF [default=OFF]
-- Build the Arrow mimalloc-based allocator
-- ARROW_PARQUET=ON [default=OFF]
-- Build the Parquet libraries
-- ARROW_ORC=OFF [default=OFF]
-- Build the Arrow ORC adapter
-- ARROW_PLASMA=OFF [default=OFF]
-- Build the plasma object store along with Arrow
-- ARROW_PLASMA_JAVA_CLIENT=OFF [default=OFF]
-- Build the plasma object store java client
-- ARROW_PYTHON=OFF [default=OFF]
-- Build the Arrow CPython extensions
-- ARROW_S3=OFF [default=OFF]
-- Build Arrow with S3 support (requires the AWS SDK for C++)
-- ARROW_TENSORFLOW=OFF [default=OFF]
-- Build Arrow with TensorFlow support enabled
-- ARROW_TESTING=OFF [default=OFF]
-- Build the Arrow testing libraries
--
-- Thirdparty toolchain options:
--
-- ARROW_DEPENDENCY_SOURCE=BUNDLED [default=AUTO|BUNDLED|SYSTEM|CONDA|BREW]
-- Method to use for acquiring arrow's build dependencies
-- ARROW_VERBOSE_THIRDPARTY_BUILD=OFF [default=OFF]
-- Show output from ExternalProjects rather than just logging to files
-- ARROW_DEPENDENCY_USE_SHARED=ON [default=ON]
-- Link to shared libraries
-- ARROW_BOOST_USE_SHARED=OFF [default=ON]
-- Rely on boost shared libraries where relevant
-- ARROW_BROTLI_USE_SHARED=ON [default=ON]
-- Rely on Brotli shared libraries where relevant
-- ARROW_BZ2_USE_SHARED=ON [default=ON]
-- Rely on Bz2 shared libraries where relevant
-- ARROW_GFLAGS_USE_SHARED=ON [default=ON]
-- Rely on GFlags shared libraries where relevant
-- ARROW_GRPC_USE_SHARED=ON [default=ON]
-- Rely on gRPC shared libraries where relevant
-- ARROW_LZ4_USE_SHARED=ON [default=ON]
-- Rely on lz4 shared libraries where relevant
-- ARROW_OPENSSL_USE_SHARED=ON [default=ON]
-- Rely on OpenSSL shared libraries where relevant
-- ARROW_PROTOBUF_USE_SHARED=ON [default=ON]
-- Rely on Protocol Buffers shared libraries where relevant
-- ARROW_THRIFT_USE_SHARED=ON [default=ON]
-- Rely on thrift shared libraries where relevant
-- ARROW_UTF8PROC_USE_SHARED=ON [default=ON]
-- Rely on utf8proc shared libraries where relevant
-- ARROW_SNAPPY_USE_SHARED=ON [default=ON]
-- Rely on snappy shared libraries where relevant
-- ARROW_UTF8PROC_USE_SHARED=ON [default=ON]
-- Rely on utf8proc shared libraries where relevant
-- ARROW_ZSTD_USE_SHARED=ON [default=ON]
-- Rely on zstd shared libraries where relevant
-- ARROW_USE_GLOG=OFF [default=OFF]
-- Build libraries with glog support for pluggable logging
-- ARROW_WITH_BACKTRACE=ON [default=ON]
-- Build with backtrace support
-- ARROW_WITH_BROTLI=ON [default=OFF]
-- Build with Brotli compression
-- ARROW_WITH_BZ2=ON [default=OFF]
-- Build with BZ2 compression
-- ARROW_WITH_LZ4=ON [default=OFF]
-- Build with lz4 compression
-- ARROW_WITH_SNAPPY=ON [default=OFF]
-- Build with Snappy compression
-- ARROW_WITH_ZLIB=ON [default=OFF]
-- Build with zlib compression
-- ARROW_WITH_ZSTD=ON [default=OFF]
-- Build with zstd compression
-- ARROW_WITH_UTF8PROC=OFF [default=ON]
-- Build with support for Unicode properties using the utf8proc library
--
-- Parquet options:
--
-- PARQUET_MINIMAL_DEPENDENCY=OFF [default=OFF]
-- Depend only on Thirdparty headers to build libparquet.
-- Always OFF if building binaries
-- PARQUET_BUILD_EXECUTABLES=OFF [default=OFF]
-- Build the Parquet executable CLI tools. Requires static libraries to be built.
-- PARQUET_BUILD_EXAMPLES=OFF [default=OFF]
-- Build the Parquet examples. Requires static libraries to be built.
-- PARQUET_REQUIRE_ENCRYPTION=OFF [default=OFF]
-- Build support for encryption. Fail if OpenSSL is not found
--
-- Gandiva options:
--
-- ARROW_GANDIVA_JAVA=OFF [default=OFF]
-- Build the Gandiva JNI wrappers
-- ARROW_GANDIVA_STATIC_LIBSTDCPP=OFF [default=OFF]
-- Include -static-libstdc++ -static-libgcc when linking with
-- Gandiva static libraries
-- ARROW_GANDIVA_PC_CXX_FLAGS="" [default=""]
-- Compiler flags to append when pre-compiling Gandiva operations
--
-- Advanced developer options:
--
-- ARROW_EXTRA_ERROR_CONTEXT=OFF [default=OFF]
-- Compile with extra error context (line numbers, code)
-- ARROW_OPTIONAL_INSTALL=OFF [default=OFF]
-- If enabled install ONLY targets that have already been built. Please be
-- advised that if this is enabled 'install' will fail silently on components
-- that have not been built
-- Outputting build configuration summary to /tmp/Rtmp65d0fd/file25c9fe7f169a/cmake_summary.json
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/Rtmp65d0fd/file25c9fe7f169a
+ /tmp/Rtmp65d0fd/file25c9f44ecaba6/cmake-3.18.1-Linux-x86_64/bin/cmake --build . --target install
Scanning dependencies of target boost_ep
Scanning dependencies of target jemalloc_ep
[ 1%] Creating directories for 'boost_ep'
[ 2%] Creating directories for 'jemalloc_ep'
[ 2%] Performing download step (download, verify and extract) for 'boost_ep'
[ 2%] Performing download step (download, verify and extract) for 'jemalloc_ep'
-- jemalloc_ep download command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/jemalloc_ep-prefix/src/jemalloc_ep-stamp/jemalloc_ep-download-*.log
[ 3%] No update step for 'jemalloc_ep'
[ 4%] Performing patch step for 'jemalloc_ep'
[ 5%] Performing configure step for 'jemalloc_ep'
-- boost_ep download command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/boost_ep-prefix/src/boost_ep-stamp/boost_ep-download-*.log
[ 6%] No update step for 'boost_ep'
[ 7%] No patch step for 'boost_ep'
[ 8%] Performing configure step for 'boost_ep'
-- jemalloc_ep configure command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/jemalloc_ep-prefix/src/jemalloc_ep-stamp/jemalloc_ep-configure-*.log
[ 9%] Performing build step for 'jemalloc_ep'
-- boost_ep configure command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/boost_ep-prefix/src/boost_ep-stamp/boost_ep-configure-*.log
[ 10%] Performing build step for 'boost_ep'
-- boost_ep build command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/boost_ep-prefix/src/boost_ep-stamp/boost_ep-build-*.log
[ 11%] No install step for 'boost_ep'
[ 12%] Completed 'boost_ep'
[ 12%] Built target boost_ep
Scanning dependencies of target zstd_ep
[ 12%] Creating directories for 'zstd_ep'
[ 13%] Performing download step (download, verify and extract) for 'zstd_ep'
-- zstd_ep download command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/zstd_ep-prefix/src/zstd_ep-stamp/zstd_ep-download-*.log
[ 14%] No update step for 'zstd_ep'
[ 15%] No patch step for 'zstd_ep'
[ 16%] Performing configure step for 'zstd_ep'
-- zstd_ep configure command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/zstd_ep-prefix/src/zstd_ep-stamp/zstd_ep-configure-*.log
[ 17%] Performing build step for 'zstd_ep'
-- zstd_ep build command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/zstd_ep-prefix/src/zstd_ep-stamp/zstd_ep-build-*.log
[ 18%] Performing install step for 'zstd_ep'
-- zstd_ep install command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/zstd_ep-prefix/src/zstd_ep-stamp/zstd_ep-install-*.log
[ 19%] Completed 'zstd_ep'
[ 19%] Built target zstd_ep
Scanning dependencies of target snappy_ep
[ 19%] Creating directories for 'snappy_ep'
[ 20%] Performing download step (download, verify and extract) for 'snappy_ep'
-- snappy_ep download command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/snappy_ep-prefix/src/snappy_ep-stamp/snappy_ep-download-*.log
[ 21%] No update step for 'snappy_ep'
[ 22%] No patch step for 'snappy_ep'
[ 23%] Performing configure step for 'snappy_ep'
-- snappy_ep configure command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/snappy_ep-prefix/src/snappy_ep-stamp/snappy_ep-configure-*.log
[ 24%] Performing build step for 'snappy_ep'
-- snappy_ep build command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/snappy_ep-prefix/src/snappy_ep-stamp/snappy_ep-build-*.log
[ 25%] Performing install step for 'snappy_ep'
-- snappy_ep install command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/snappy_ep-prefix/src/snappy_ep-stamp/snappy_ep-install-*.log
[ 26%] Completed 'snappy_ep'
[ 26%] Built target snappy_ep
Scanning dependencies of target brotli_ep
[ 27%] Creating directories for 'brotli_ep'
[ 28%] Performing download step (download, verify and extract) for 'brotli_ep'
-- brotli_ep download command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/brotli_ep-prefix/src/brotli_ep-stamp/brotli_ep-download-*.log
[ 29%] No update step for 'brotli_ep'
[ 30%] No patch step for 'brotli_ep'
[ 31%] Performing configure step for 'brotli_ep'
-- brotli_ep configure command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/brotli_ep-prefix/src/brotli_ep-stamp/brotli_ep-configure-*.log
[ 31%] Performing build step for 'brotli_ep'
-- brotli_ep build command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/brotli_ep-prefix/src/brotli_ep-stamp/brotli_ep-build-*.log
[ 31%] Performing install step for 'brotli_ep'
-- brotli_ep install command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/brotli_ep-prefix/src/brotli_ep-stamp/brotli_ep-install-*.log
[ 32%] Completed 'brotli_ep'
[ 32%] Built target brotli_ep
Scanning dependencies of target thrift_ep
[ 33%] Creating directories for 'thrift_ep'
[ 34%] Performing download step (download, verify and extract) for 'thrift_ep'
-- thrift_ep download command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/thrift_ep-prefix/src/thrift_ep-stamp/thrift_ep-download-*.log
[ 35%] No update step for 'thrift_ep'
[ 36%] No patch step for 'thrift_ep'
[ 36%] Performing configure step for 'thrift_ep'
-- jemalloc_ep build command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/jemalloc_ep-prefix/src/jemalloc_ep-stamp/jemalloc_ep-build-*.log
[ 37%] Performing install step for 'jemalloc_ep'
-- jemalloc_ep install command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/jemalloc_ep-prefix/src/jemalloc_ep-stamp/jemalloc_ep-install-*.log
[ 38%] Completed 'jemalloc_ep'
[ 38%] Built target jemalloc_ep
Scanning dependencies of target rapidjson_ep
[ 39%] Creating directories for 'rapidjson_ep'
[ 40%] Performing download step (download, verify and extract) for 'rapidjson_ep'
-- rapidjson_ep download command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/src/rapidjson_ep-stamp/rapidjson_ep-download-*.log
[ 40%] No update step for 'rapidjson_ep'
[ 41%] No patch step for 'rapidjson_ep'
[ 42%] Performing configure step for 'rapidjson_ep'
-- rapidjson_ep configure command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/src/rapidjson_ep-stamp/rapidjson_ep-configure-*.log
[ 43%] Performing build step for 'rapidjson_ep'
-- rapidjson_ep build command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/src/rapidjson_ep-stamp/rapidjson_ep-build-*.log
[ 44%] Performing install step for 'rapidjson_ep'
-- rapidjson_ep install command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/src/rapidjson_ep-stamp/rapidjson_ep-install-*.log
[ 45%] Completed 'rapidjson_ep'
[ 45%] Built target rapidjson_ep
Scanning dependencies of target bzip2_ep
[ 46%] Creating directories for 'bzip2_ep'
[ 47%] Performing download step (download, verify and extract) for 'bzip2_ep'
-- bzip2_ep download command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/bzip2_ep-prefix/src/bzip2_ep-stamp/bzip2_ep-download-*.log
[ 48%] No update step for 'bzip2_ep'
[ 48%] No patch step for 'bzip2_ep'
[ 49%] No configure step for 'bzip2_ep'
[ 50%] Performing build step for 'bzip2_ep'
-- thrift_ep configure command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/thrift_ep-prefix/src/thrift_ep-stamp/thrift_ep-configure-*.log
[ 51%] Performing build step for 'thrift_ep'
-- bzip2_ep build command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/bzip2_ep-prefix/src/bzip2_ep-stamp/bzip2_ep-build-*.log
[ 52%] Performing install step for 'bzip2_ep'
-- bzip2_ep install command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/bzip2_ep-prefix/src/bzip2_ep-stamp/bzip2_ep-install-*.log
[ 53%] Completed 'bzip2_ep'
[ 53%] Built target bzip2_ep
Scanning dependencies of target zlib_ep
[ 54%] Creating directories for 'zlib_ep'
[ 55%] Performing download step (download, verify and extract) for 'zlib_ep'
-- zlib_ep download command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/zlib_ep-prefix/src/zlib_ep-stamp/zlib_ep-download-*.log
[ 55%] No update step for 'zlib_ep'
[ 56%] No patch step for 'zlib_ep'
[ 57%] Performing configure step for 'zlib_ep'
-- zlib_ep configure command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/zlib_ep-prefix/src/zlib_ep-stamp/zlib_ep-configure-*.log
[ 58%] Performing build step for 'zlib_ep'
-- zlib_ep build command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/zlib_ep-prefix/src/zlib_ep-stamp/zlib_ep-build-*.log
[ 59%] Performing install step for 'zlib_ep'
-- zlib_ep install command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/zlib_ep-prefix/src/zlib_ep-stamp/zlib_ep-install-*.log
[ 60%] Completed 'zlib_ep'
[ 60%] Built target zlib_ep
Scanning dependencies of target lz4_ep
[ 61%] Creating directories for 'lz4_ep'
[ 62%] Performing download step (download, verify and extract) for 'lz4_ep'
-- lz4_ep download command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/lz4_ep-prefix/src/lz4_ep-stamp/lz4_ep-download-*.log
[ 63%] Performing update step for 'lz4_ep'
[ 64%] No patch step for 'lz4_ep'
[ 65%] No configure step for 'lz4_ep'
[ 65%] Performing build step for 'lz4_ep'
-- lz4_ep build command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/lz4_ep-prefix/src/lz4_ep-stamp/lz4_ep-build-*.log
[ 65%] No install step for 'lz4_ep'
[ 66%] Completed 'lz4_ep'
[ 66%] Built target lz4_ep
Scanning dependencies of target arrow_dataset_objlib
[ 67%] Building CXX object src/arrow/dataset/CMakeFiles/arrow_dataset_objlib.dir/Unity/unity_1_cxx.cxx.o
[ 68%] Building CXX object src/arrow/dataset/CMakeFiles/arrow_dataset_objlib.dir/Unity/unity_0_cxx.cxx.o
-- thrift_ep build command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/thrift_ep-prefix/src/thrift_ep-stamp/thrift_ep-build-*.log
[ 69%] Performing install step for 'thrift_ep'
-- thrift_ep install command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/thrift_ep-prefix/src/thrift_ep-stamp/thrift_ep-install-*.log
[ 69%] Completed 'thrift_ep'
[ 69%] Built target thrift_ep
Scanning dependencies of target toolchain
[ 69%] Built target toolchain
Scanning dependencies of target arrow_bundled_dependencies
[ 69%] Bundling /tmp/Rtmp65d0fd/file25c9fe7f169a/release/libarrow_bundled_dependencies.a
[ 69%] Built target arrow_bundled_dependencies
Scanning dependencies of target arrow_dependencies
[ 69%] Built target arrow_dependencies
Scanning dependencies of target arrow_objlib
[ 70%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_19_cxx.cxx.o
[ 70%] Built target arrow_dataset_objlib
[ 71%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_18_cxx.cxx.o
[ 71%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_17_cxx.cxx.o
[ 72%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_16_cxx.cxx.o
[ 73%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_15_cxx.cxx.o
[ 74%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_14_cxx.cxx.o
[ 75%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_13_cxx.cxx.o
[ 76%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_12_cxx.cxx.o
[ 76%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_11_cxx.cxx.o
[ 77%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_10_cxx.cxx.o
[ 78%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_9_cxx.cxx.o
In file included from /tmp/Rtmp65d0fd/file25c9fe7f169a/src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_12_cxx.cxx:4:
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/csv/converter.cc: In member function ‘arrow::Result<std::shared_ptr<arrow::Array> > arrow::csv::{anonymous}::PrimitiveConverter<T, ValueDecoderType>::Convert(const arrow::csv::BlockParser&, int32_t) [with T = arrow::BooleanType; ValueDecoderType = arrow::csv::{anonymous}::BooleanValueDecoder]’:
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/csv/converter.cc:434:18: warning: ‘value’ may be used uninitialized in this function [-Wmaybe-uninitialized]
 value_type value;
 ^~~~~
In file included from /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/array/builder_base.h:30,
 from /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/array/builder_adaptive.h:25,
 from /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/builder.h:22,
 from /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/csv/converter.cc:27,
 from /tmp/Rtmp65d0fd/file25c9fe7f169a/src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_12_cxx.cxx:4:
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/buffer_builder.h: In member function ‘arrow::Result<std::shared_ptr<arrow::Array> > arrow::csv::{anonymous}::PrimitiveConverter<T, ValueDecoderType>::Convert(const arrow::csv::BlockParser&, int32_t) [with T = arrow::FixedSizeBinaryType; ValueDecoderType = arrow::csv::{anonymous}::FixedSizeBinaryValueDecoder]’:
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/buffer_builder.h:136:11: warning: ‘value’ may be used uninitialized in this function [-Wmaybe-uninitialized]
 memcpy(data_ + size_, data, static_cast<size_t>(length));
 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /tmp/Rtmp65d0fd/file25c9fe7f169a/src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_12_cxx.cxx:4:
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/csv/converter.cc:434:18: note: ‘value’ was declared here
 value_type value;
 ^~~~~
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/csv/converter.cc: In member function ‘arrow::Result<std::shared_ptr<arrow::Array> > arrow::csv::{anonymous}::PrimitiveConverter<T, ValueDecoderType>::Convert(const arrow::csv::BlockParser&, int32_t) [with T = arrow::TimestampType; ValueDecoderType = arrow::csv::{anonymous}::InlineISO8601ValueDecoder]’:
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/csv/converter.cc:434:18: warning: ‘value’ may be used uninitialized in this function [-Wmaybe-uninitialized]
In file included from /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/array/builder_base.h:30,
 from /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/array/builder_adaptive.h:25,
 from /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/builder.h:22,
 from /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/csv/converter.cc:27,
 from /tmp/Rtmp65d0fd/file25c9fe7f169a/src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_12_cxx.cxx:4:
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/buffer_builder.h: In member function ‘arrow::Result<std::shared_ptr<arrow::Array> > arrow::csv::{anonymous}::PrimitiveConverter<T, ValueDecoderType>::Convert(const arrow::csv::BlockParser&, int32_t) [with T = arrow::UInt16Type; ValueDecoderType = arrow::csv::{anonymous}::NumericValueDecoder<arrow::UInt16Type>]’:
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/buffer_builder.h:136:11: warning: ‘value’ may be used uninitialized in this function [-Wmaybe-uninitialized]
 memcpy(data_ + size_, data, static_cast<size_t>(length));
 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /tmp/Rtmp65d0fd/file25c9fe7f169a/src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_12_cxx.cxx:4:
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/csv/converter.cc:434:18: note: ‘value’ was declared here
 value_type value;
 ^~~~~
In file included from /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/array/builder_base.h:30,
 from /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/array/builder_adaptive.h:25,
 from /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/builder.h:22,
 from /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/csv/converter.cc:27,
 from /tmp/Rtmp65d0fd/file25c9fe7f169a/src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_12_cxx.cxx:4:
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/buffer_builder.h: In member function ‘arrow::Result<std::shared_ptr<arrow::Array> > arrow::csv::{anonymous}::PrimitiveConverter<T, ValueDecoderType>::Convert(const arrow::csv::BlockParser&, int32_t) [with T = arrow::UInt8Type; ValueDecoderType = arrow::csv::{anonymous}::NumericValueDecoder<arrow::UInt8Type>]’:
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/buffer_builder.h:136:11: warning: ‘value’ may be used uninitialized in this function [-Wmaybe-uninitialized]
 memcpy(data_ + size_, data, static_cast<size_t>(length));
 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /tmp/Rtmp65d0fd/file25c9fe7f169a/src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_12_cxx.cxx:4:
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/csv/converter.cc:434:18: note: ‘value’ was declared here
 value_type value;
 ^~~~~
[ 79%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_8_cxx.cxx.o
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/csv/converter.cc: In member function ‘arrow::Result<std::shared_ptr<arrow::Array> > arrow::csv::{anonymous}::TypedDictionaryConverter<T, ValueDecoderType>::Convert(const arrow::csv::BlockParser&, int32_t) [with T = arrow::FixedSizeBinaryType; ValueDecoderType = arrow::csv::{anonymous}::FixedSizeBinaryValueDecoder ’:
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/csv/converter.cc:480:18: warning: ‘value’ may be used uninitialized in this function [-Wmaybe-uninitialized]
 value_type value;
 ^~~~~
[ 80%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_7_cxx.cxx.o
[ 81%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_6_cxx.cxx.o
[ 81%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_5_cxx.cxx.o
[ 82%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_4_cxx.cxx.o
[ 83%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_3_cxx.cxx.o
In file included from /tmp/Rtmp65d0fd/file25c9fe7f169a/src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_4_cxx.cxx:6:
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/tensor.cc: In member function ‘arrow::Result<long int> arrow::Tensor::CountNonZero() const’:
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/tensor.cc:283:18: warning: ‘*((void*)& counter +8)’ may be used uninitialized in this function [-Wmaybe-uninitialized]
 NonZeroCounter counter(*this);
 ^~~~~~~
[ 84%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_2_cxx.cxx.o
^[^[[ 85%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_1_cxx.cxx.o
[ 86%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_0_cxx.cxx.o
[ 86%] Building C object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_1_c.c.o
[ 87%] Building C object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_0_c.c.o
[ 88%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/memory_pool.cc.o
[ 89%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/vendored/datetime/tz.cpp.o
[ 90%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/util/bpacking_avx2.cc.o
[ 91%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/util/bpacking_avx512.cc.o
[ 91%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/compute/kernels/aggregate_basic_avx2.cc.o
[ 92%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/compute/kernels/aggregate_basic_avx512.cc.o
[ 92%] Built target arrow_objlib
Scanning dependencies of target arrow_static
[ 93%] Linking CXX static library ../../release/libarrow.a
[ 93%] Built target arrow_static
Scanning dependencies of target parquet_objlib
[ 94%] Building CXX object src/parquet/CMakeFiles/parquet_objlib.dir/Unity/unity_3_cxx.cxx.o
[ 95%] Building CXX object src/parquet/CMakeFiles/parquet_objlib.dir/Unity/unity_2_cxx.cxx.o
[ 96%] Building CXX object src/parquet/CMakeFiles/parquet_objlib.dir/Unity/unity_1_cxx.cxx.o
[ 97%] Building CXX object src/parquet/CMakeFiles/parquet_objlib.dir/Unity/unity_0_cxx.cxx.o
[ 98%] Building CXX object src/parquet/CMakeFiles/parquet_objlib.dir/level_comparison_avx2.cc.o
[ 98%] Building CXX object src/parquet/CMakeFiles/parquet_objlib.dir/level_conversion_bmi2.cc.o
[ 98%] Built target parquet_objlib
Scanning dependencies of target parquet_static
[ 99%] Linking CXX static library ../../release/libparquet.a
[ 99%] Built target parquet_static
Scanning dependencies of target arrow_dataset_static
[100%] Linking CXX static library ../../../release/libarrow_dataset.a
[100%] Built target arrow_dataset_static
Install the project...
-- Install configuration: "RELEASE"
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/util/config.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/share/doc/arrow/LICENSE.txt
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/share/doc/arrow/NOTICE.txt
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/share/doc/arrow/README.md
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/libarrow.a
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/cmake/arrow/FindArrow.cmake
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/cmake/arrow/ArrowTargets.cmake
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/cmake/arrow/ArrowTargets-release.cmake
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/cmake/arrow/ArrowConfig.cmake
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/cmake/arrow/ArrowConfigVersion.cmake
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/pkgconfig/arrow.pc
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/libarrow_bundled_dependencies.a
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/api.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/array.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/buffer.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/buffer_builder.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/builder.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/chunked_array.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/compare.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/config.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/datum.h
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-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/vendored/datetime/ios.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/vendored/datetime/tz.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/vendored/datetime/tz_private.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/vendored/datetime/visibility.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/vendored/double-conversion/bignum-dtoa.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/vendored/double-conversion/bignum.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/vendored/double-conversion/cached-powers.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/vendored/double-conversion/diy-fp.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/vendored/double-conversion/double-conversion.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/vendored/double-conversion/fast-dtoa.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/vendored/double-conversion/fixed-dtoa.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/vendored/double-conversion/ieee.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/vendored/double-conversion/strtod.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/vendored/double-conversion/utils.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/csv/api.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/csv/chunker.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/csv/column_builder.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/csv/column_decoder.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/csv/converter.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/csv/options.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/csv/parser.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/csv/reader.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/csv/test_common.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/pkgconfig/arrow-csv.pc
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/compute/api.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/compute/api_aggregate.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/compute/api_scalar.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/compute/api_vector.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/compute/cast.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/compute/exec.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/compute/function.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/compute/kernel.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/compute/registry.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/compute/type_fwd.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/pkgconfig/arrow-compute.pc
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/dataset/api.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/dataset/dataset.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/dataset/discovery.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/dataset/file_base.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/dataset/file_csv.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/dataset/file_ipc.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/dataset/file_parquet.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/dataset/filter.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/dataset/partition.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/dataset/pch.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/dataset/projector.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/dataset/scanner.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/dataset/test_util.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/dataset/type_fwd.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/dataset/visibility.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/libarrow_dataset.a
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/cmake/arrow/FindArrowDataset.cmake
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/cmake/arrow/ArrowDatasetTargets.cmake
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/cmake/arrow/ArrowDatasetTargets-release.cmake
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/cmake/arrow/ArrowDatasetConfig.cmake
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/cmake/arrow/ArrowDatasetConfigVersion.cmake
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/pkgconfig/arrow-dataset.pc
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/filesystem/api.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/filesystem/filesystem.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/filesystem/hdfs.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/filesystem/localfs.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/filesystem/mockfs.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/filesystem/path_forest.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/filesystem/path_util.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/filesystem/s3_test_util.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/filesystem/s3fs.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/filesystem/test_util.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/filesystem/type_fwd.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/pkgconfig/arrow-filesystem.pc
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/ipc/api.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/ipc/dictionary.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/ipc/feather.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/ipc/json_simple.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/ipc/message.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/ipc/options.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/ipc/reader.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/ipc/test_common.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/ipc/type_fwd.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/ipc/util.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/ipc/writer.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/json/api.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/json/chunked_builder.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/json/chunker.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/json/converter.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/json/options.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/json/parser.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/json/rapidjson_defs.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/json/reader.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/json/test_common.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/pkgconfig/arrow-json.pc
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/libparquet.a
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/cmake/arrow/FindParquet.cmake
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/cmake/arrow/ParquetTargets.cmake
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/cmake/arrow/ParquetTargets-release.cmake
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/cmake/arrow/ParquetConfig.cmake
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/cmake/arrow/ParquetConfigVersion.cmake
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/pkgconfig/parquet.pc
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/bloom_filter.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/column_page.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/column_reader.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/column_scanner.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/column_writer.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/deprecated_io.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/encoding.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/encryption.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/exception.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/file_reader.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/file_writer.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/hasher.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/level_comparison.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/level_comparison_inc.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/level_conversion.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/level_conversion_inc.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/metadata.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/murmur3.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/pch.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/platform.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/printer.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/properties.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/schema.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/statistics.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/stream_reader.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/stream_writer.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/test_encryption_util.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/test_util.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/type_fwd.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/types.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/windows_compatibility.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/parquet_version.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/api/io.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/api/reader.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/api/schema.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/api/writer.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/arrow/reader.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/arrow/schema.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/arrow/test_util.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/arrow/writer.h
+ popd
/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow
PKG_CFLAGS=-I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW
PKG_LIBS=-L/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib -larrow_dataset -lparquet -larrow -larrow -larrow_bundled_dependencies -larrow_dataset -lparquet
** libs
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c array.cpp -o array.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c array_from_vector.cpp -o array_from_vector.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c array_to_vector.cpp -o array_to_vector.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c arraydata.cpp -o arraydata.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c arrowExports.cpp -o arrowExports.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c buffer.cpp -o buffer.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c chunkedarray.cpp -o chunkedarray.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c compression.cpp -o compression.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c compute.cpp -o compute.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c csv.cpp -o csv.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c dataset.cpp -o dataset.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c datatype.cpp -o datatype.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c expression.cpp -o expression.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c feather.cpp -o feather.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c field.cpp -o field.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c filesystem.cpp -o filesystem.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c imports.cpp -o imports.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c io.cpp -o io.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/
home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c json.cpp -o json.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/
home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c memorypool.cpp -o memorypool.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/
home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c message.cpp -o message.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c parquet.cpp -o parquet.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c py-to-r.cpp -o py-to-r.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c recordbatch.cpp -o recordbatch.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c recordbatchreader.cpp -o recordbatchreader.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c recordbatchwriter.cpp -o recordbatchwriter.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c scalar.cpp -o scalar.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c schema.cpp -o schema.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c symbols.cpp -o symbols.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c table.cpp -o table.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c threadpool.cpp -o threadpool.o
g++ -std=gnu++11 -shared -L/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/lib -L/usr/local/lib64 -o arrow.so array.o array_from_vector.o array_to_vector.o arraydata.o arrowExports.o buffer.o chunkedarray.o compression.o compute.o csv.o dataset.o datatype.o expression.o feather.o field.o filesystem.o imports.o io.o json.o memorypool.o message.o parquet.o py-to-r.o recordbatch.o recordbatchreader.o recordbatchwriter.o scalar.o schema.o symbols.o table.o threadpool.o -L/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib -larrow_dataset -lparquet -larrow -larrow -larrow_bundled_dependencies -larrow_dataset -lparquet -L/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/lib -lR
installing to /home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/00LOCK-arrow/00new/arrow/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (arrow)
The downloaded source packages are in
 ‘/tmp/RtmpNoQSc4/downloaded_packages’
{code}
 

And here are some directories
{code:java}
[yihsiao@gl-login2 ~]$ ls /home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/00LOCK-arrow/00new/arrow/libs
ls: cannot access /home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/00LOCK-arrow/00new/arrow/libs: No such file or directory
[yihsiao@gl-login2 ~]$ ls /home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/00LOCK-arrow/00new/arrow
ls: cannot access /home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/00LOCK-arrow/00new/arrow: No such file or directory
[yihsiao@gl-login2 ~]$ ls /home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/00LOCK-arrow/00new
ls: cannot access /home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/00LOCK-arrow/00new: No such file or directory
[yihsiao@gl-login2 ~]$ ls /home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/00LOCK-arrow/
arrow
[yihsiao@gl-login2 ~]$ ls /home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/00LOCK-arrow/arrow/
libs
[yihsiao@gl-login2 ~]$ ls /home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/00LOCK-arrow/arrow/libs/
[yihsiao@gl-login2 ~]$ ls ~/R/x86_64-pc-linux-gnu-library/4.0/arrow/
build_arrow_static.sh demo_flight_server.py DESCRIPTION doc help html INDEX libs Meta NAMESPACE NEWS.md NOTICE.txt R v0.7.1.parquet
[yihsiao@gl-login2 ~]$ ls ~/R/x86_64-pc-linux-gnu-library/4.0/arrow/libs/
arrow.so{code}
Thank you!

 

 


was (Author: yihsiao):
 

[~npr] Full log is here
{code:java}
> arrow::install_arrow()
Installing package into ‘/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0’
(as ‘lib’ is unspecified)
trying URL 'https://cloud.r-project.org/src/contrib/arrow_2.0.0.tar.gz'
Content type 'application/x-gzip' length 322592 bytes (315 KB)
==================================================
downloaded 315 KB
* installing *source* package ‘arrow’ ...
** package ‘arrow’ successfully unpacked and MD5 sums checked
** using staged installation
trying URL 'https://dl.bintray.com/ursalabs/arrow-r/libarrow/bin/centos-7/arrow-2.0.0.zip'
Error in download.file(from_url, to_file, quiet = quietly) :
 cannot open URL 'https://dl.bintray.com/ursalabs/arrow-r/libarrow/bin/centos-7/arrow-2.0.0.zip'
*** No C++ binaries found for centos-7
trying URL 'https://dl.bintray.com/ursalabs/arrow-r/libarrow/src/arrow-2.0.0.zip'
Error in download.file(from_url, to_file, quiet = quietly) :
 cannot open URL 'https://dl.bintray.com/ursalabs/arrow-r/libarrow/src/arrow-2.0.0.zip'
trying URL 'https://www.apache.org/dyn/closer.lua?action=download&filename=arrow/arrow-2.0.0/apache-arrow-2.0.0.tar.gz'
Content type 'application/x-gzip' length 7530266 bytes (7.2 MB)
==================================================
downloaded 7.2 MB
*** Successfully retrieved C++ source
*** Building C++ libraries
*** Building with MAKEFLAGS= -j2
**** cmake
trying URL 'https://github.com/Kitware/CMake/releases/download/v3.18.1/cmake-3.18.1-Linux-x86_64.tar.gz'
Content type 'application/octet-stream' length 41750973 bytes (39.8 MB)
==================================================
downloaded 39.8 MB
**** S3 support not available for gcc < 4.9; building with ARROW_S3=OFF
**** arrow with SOURCE_DIR="/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp" BUILD_DIR="/tmp/Rtmp65d0fd/file25c9fe7f169a" DEST_DIR="libarrow/arrow-2.0.0" CMAKE="/tmp/Rtmp65d0fd/file2
5c9f44ecaba6/cmake-3.18.1-Linux-x86_64/bin/cmake" CC="gcc" CXX="g++ -std=gnu++11" LDFLAGS="-L/usr/local/lib64" ARROW_S3=OFF
++ pwd
+ : /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow
+ : /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp
+ : /tmp/Rtmp65d0fd/file25c9fe7f169a
+ : libarrow/arrow-2.0.0
+ : /tmp/Rtmp65d0fd/file25c9f44ecaba6/cmake-3.18.1-Linux-x86_64/bin/cmake
++ cd /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp
++ pwd
+ SOURCE_DIR=/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp
++ mkdir -p libarrow/arrow-2.0.0
++ cd libarrow/arrow-2.0.0
++ pwd
+ DEST_DIR=/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0
+ '[' '' = '' ']'
+ which ninja
+ '[' false = false ']'
+ ARROW_DEFAULT_PARAM=ON
+ mkdir -p /tmp/Rtmp65d0fd/file25c9fe7f169a
+ pushd /tmp/Rtmp65d0fd/file25c9fe7f169a
/tmp/Rtmp65d0fd/file25c9fe7f169a /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow
+ /tmp/Rtmp65d0fd/file25c9f44ecaba6/cmake-3.18.1-Linux-x86_64/bin/cmake -DARROW_BOOST_USE_SHARED=OFF -DARROW_BUILD_TESTS=OFF -DARROW_BUILD_SHARED=OFF -DARROW_BUILD_STATIC=ON -DARROW_COMPUTE=ON -DARROW_CSV=ON -DARROW_DATASET=ON -DARROW_DEPENDENCY_SOURCE=BUNDLED -DARROW_FILESYSTEM=ON -DARROW_JEMALLOC=ON -DARROW_JSON=ON -DARROW_PARQUET=ON -DARROW_S3=OFF -DARROW_WITH_BROTLI=ON -DARROW_WITH_BZ2=ON -DARROW_WITH_LZ4=ON -DARROW_WITH_SNAPPY=ON -DARROW_WITH_UTF8PROC=OFF -DARROW_WITH_ZLIB=ON -DARROW_WITH_ZSTD=ON -DCMAKE_BUILD_TYPE=Release -DCMAKE_INSTALL_LIBDIR=lib -DCMAKE_INSTALL_PREFIX=/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0 -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_UNITY_BUILD=ON -G 'Unix Makefiles' /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp
-- Building using CMake version: 3.18.1
-- The C compiler identification is GNU 8.2.0
-- The CXX compiler identification is GNU 8.2.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /sw/arcts/centos7/gcc/8.2.0/bin/gcc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /sw/arcts/centos7/gcc/8.2.0/bin/g++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Arrow version: 2.0.0 (full: '2.0.0')
-- Arrow SO version: 200 (full: 200.0.0)
-- clang-tidy not found
-- clang-format not found
-- Could NOT find ClangTools (missing: CLANG_FORMAT_BIN CLANG_TIDY_BIN)
-- infer not found
fatal: Not a git repository (or any parent up to mount point /tmp)
Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set).
-- Found Python3: /usr/bin/python3.6 (found version "3.6.8") found components: Interpreter
-- Found cpplint executable at /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/build-support/cpplint.py
-- System processor: x86_64
-- Performing Test CXX_SUPPORTS_SSE4_2
-- Performing Test CXX_SUPPORTS_SSE4_2 - Success
-- Performing Test CXX_SUPPORTS_AVX2
-- Performing Test CXX_SUPPORTS_AVX2 - Success
-- Performing Test CXX_SUPPORTS_AVX512
-- Performing Test CXX_SUPPORTS_AVX512 - Success
-- Arrow build warning level: PRODUCTION
Using ld linker
Configured for RELEASE build (set with cmake -DCMAKE_BUILD_TYPE={release,debug,...})
-- Build Type: RELEASE
-- Using BUNDLED approach to find dependencies
-- ARROW_ABSL_BUILD_VERSION: 2eba343b51e0923cd3fb919a6abd6120590fc059
-- ARROW_AWSSDK_BUILD_VERSION: 1.8.57
-- ARROW_AWS_CHECKSUMS_BUILD_VERSION: v0.1.5
-- ARROW_AWS_C_COMMON_BUILD_VERSION: v0.4.59
-- ARROW_AWS_C_EVENT_STREAM_BUILD_VERSION: v0.1.5
-- ARROW_BOOST_BUILD_VERSION: 1.71.0
-- ARROW_BROTLI_BUILD_VERSION: v1.0.7
-- ARROW_BZIP2_BUILD_VERSION: 1.0.8
-- ARROW_CARES_BUILD_VERSION: 1.16.1
-- ARROW_GBENCHMARK_BUILD_VERSION: v1.5.1
-- ARROW_GFLAGS_BUILD_VERSION: v2.2.2
-- ARROW_GLOG_BUILD_VERSION: v0.4.0
-- ARROW_GRPC_BUILD_VERSION: v1.29.1
-- ARROW_GTEST_BUILD_VERSION: 1.8.1
-- ARROW_JEMALLOC_BUILD_VERSION: 5.2.1
-- ARROW_LZ4_BUILD_VERSION: v1.9.2
-- ARROW_MIMALLOC_BUILD_VERSION: v1.6.4
-- ARROW_ORC_BUILD_VERSION: 1.6.2
-- ARROW_PROTOBUF_BUILD_VERSION: v3.12.1
-- ARROW_RAPIDJSON_BUILD_VERSION: 1a803826f1197b5e30703afe4b9c0e7dd48074f5
-- ARROW_RE2_BUILD_VERSION: 2019-08-01
-- ARROW_SNAPPY_BUILD_VERSION: 1.1.8
-- ARROW_THRIFT_BUILD_VERSION: 0.12.0
-- ARROW_THRIFT_BUILD_MD5_CHECKSUM: 3deebbb4d1ca77dd9c9e009a1ea02183
-- ARROW_UTF8PROC_BUILD_VERSION: v2.5.0
-- ARROW_ZLIB_BUILD_VERSION: 1.2.11
-- ARROW_ZSTD_BUILD_VERSION: v1.4.5
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed
-- Check if compiler accepts -pthread
-- Check if compiler accepts -pthread - yes
-- Found Threads: TRUE
-- Added static library dependency boost_system_static: /tmp/Rtmp65d0fd/file25c9fe7f169a/boost_ep-prefix/src/boost_ep/stage/lib/libboost_system.a
-- Added static library dependency boost_filesystem_static: /tmp/Rtmp65d0fd/file25c9fe7f169a/boost_ep-prefix/src/boost_ep/stage/lib/libboost_filesystem.a
-- Added static library dependency boost_regex_static: /tmp/Rtmp65d0fd/file25c9fe7f169a/boost_ep-prefix/src/boost_ep/stage/lib/libboost_regex.a
-- Boost include dir: /tmp/Rtmp65d0fd/file25c9fe7f169a/boost_ep-prefix/src/boost_ep
-- Boost libraries: boost_system_static;boost_filesystem_static
-- Building snappy from source
-- Building brotli from source
-- Building without OpenSSL support. Minimum OpenSSL version 1.0.2 required.
Building Apache Thrift from source
-- Building (vendored) jemalloc from source
-- Building rapidjson from source
-- Building ZLIB from source
-- Building lz4 from source
-- Building zstd from source
-- Building BZip2 from source
-- Found hdfs.h at: /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/thirdparty/hadoop/include/hdfs.h
-- All bundled static libraries: boost_system_static;boost_filesystem_static;boost_regex_static;Snappy::snappy;Brotli::brotlicommon;Brotli::brotlienc;Brotli::brotlidec;thrift::thrift;jemalloc::jemalloc;ZLIB::ZLIB;LZ4::lz4;zstd::libzstd;BZip2::BZip2
-- CMAKE_C_FLAGS: -O3 -DNDEBUG -Wall -fno-semantic-interposition -msse4.2
-- CMAKE_CXX_FLAGS: -Wno-noexcept-type -Wno-subobject-linkage -fdiagnostics-color=always -O3 -DNDEBUG -Wall -fno-semantic-interposition -msse4.2
-- Looking for backtrace
-- Looking for backtrace - found
-- backtrace facility detected in default set of libraries
-- Found Backtrace: /usr/include
-- Creating bundled static library target arrow_bundled_dependencies at /tmp/Rtmp65d0fd/file25c9fe7f169a/release/libarrow_bundled_dependencies.a
-- ---------------------------------------------------------------------
-- Arrow version: 2.0.0
--
-- Build configuration summary:
-- Generator: Unix Makefiles
-- Build type: RELEASE
-- Source directory: /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp
-- Install prefix: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0
--
-- Compile and link options:
--
-- ARROW_CXXFLAGS="" [default=""]
-- Compiler flags to append when compiling Arrow
-- ARROW_BUILD_STATIC=ON [default=ON]
-- Build static libraries
-- ARROW_BUILD_SHARED=OFF [default=ON]
-- Build shared libraries
-- ARROW_PACKAGE_KIND="" [default=""]
-- Arbitrary string that identifies the kind of package
-- (for informational purposes)
-- ARROW_GIT_ID="" [default=""]
-- The Arrow git commit id (if any)
-- ARROW_GIT_DESCRIPTION="" [default=""]
-- The Arrow git commit description (if any)
-- ARROW_NO_DEPRECATED_API=OFF [default=OFF]
-- Exclude deprecated APIs from build
-- ARROW_USE_CCACHE=ON [default=ON]
-- Use ccache when compiling (if available)
-- ARROW_USE_LD_GOLD=OFF [default=OFF]
-- Use ld.gold for linking on Linux (if available)
-- ARROW_USE_PRECOMPILED_HEADERS=OFF [default=OFF]
-- Use precompiled headers when compiling
-- ARROW_SIMD_LEVEL=SSE4_2 [default=NONE|SSE4_2|AVX2|AVX512]
-- Compile-time SIMD optimization level
-- ARROW_RUNTIME_SIMD_LEVEL=MAX [default=NONE|SSE4_2|AVX2|AVX512|MAX]
-- Max runtime SIMD optimization level
-- ARROW_ARMV8_ARCH=armv8-a [default=armv8-a|armv8-a+crc+crypto]
-- Arm64 arch and extensions
-- ARROW_ALTIVEC=ON [default=ON]
-- Build with Altivec if compiler has support
-- ARROW_RPATH_ORIGIN=OFF [default=OFF]
-- Build Arrow libraries with RATH set to $ORIGIN
-- ARROW_INSTALL_NAME_RPATH=ON [default=ON]
-- Build Arrow libraries with install_name set to @rpath
-- ARROW_GGDB_DEBUG=ON [default=ON]
-- Pass -ggdb flag to debug builds
--
-- Test and benchmark options:
--
-- ARROW_BUILD_EXAMPLES=OFF [default=OFF]
-- Build the Arrow examples
-- ARROW_BUILD_TESTS=OFF [default=OFF]
-- Build the Arrow googletest unit tests
-- ARROW_ENABLE_TIMING_TESTS=ON [default=ON]
-- Enable timing-sensitive tests
-- ARROW_BUILD_INTEGRATION=OFF [default=OFF]
-- Build the Arrow integration test executables
-- ARROW_BUILD_BENCHMARKS=OFF [default=OFF]
-- Build the Arrow micro benchmarks
-- ARROW_BUILD_BENCHMARKS_REFERENCE=OFF [default=OFF]
-- Build the Arrow micro reference benchmarks
-- ARROW_TEST_LINKAGE=static [default=shared|static]
-- Linkage of Arrow libraries with unit tests executables.
-- ARROW_FUZZING=OFF [default=OFF]
-- Build Arrow Fuzzing executables
-- ARROW_LARGE_MEMORY_TESTS=OFF [default=OFF]
-- Enable unit tests which use large memory
--
-- Lint options:
--
-- ARROW_ONLY_LINT=OFF [default=OFF]
-- Only define the lint and check-format targets
-- ARROW_VERBOSE_LINT=OFF [default=OFF]
-- If off, 'quiet' flags will be passed to linting tools
-- ARROW_GENERATE_COVERAGE=OFF [default=OFF]
-- Build with C++ code coverage enabled
--
-- Checks options:
--
-- ARROW_TEST_MEMCHECK=OFF [default=OFF]
-- Run the test suite using valgrind --tool=memcheck
-- ARROW_USE_ASAN=OFF [default=OFF]
-- Enable Address Sanitizer checks
-- ARROW_USE_TSAN=OFF [default=OFF]
-- Enable Thread Sanitizer checks
-- ARROW_USE_UBSAN=OFF [default=OFF]
-- Enable Undefined Behavior sanitizer checks
--
-- Project component options:
--
-- ARROW_BUILD_UTILITIES=OFF [default=OFF]
-- Build Arrow commandline utilities
-- ARROW_COMPUTE=ON [default=OFF]
-- Build the Arrow Compute Modules
-- ARROW_CSV=ON [default=OFF]
-- Build the Arrow CSV Parser Module
-- ARROW_CUDA=OFF [default=OFF]
-- Build the Arrow CUDA extensions (requires CUDA toolkit)
-- ARROW_DATASET=ON [default=OFF]
-- Build the Arrow Dataset Modules
-- ARROW_FILESYSTEM=ON [default=OFF]
-- Build the Arrow Filesystem Layer
-- ARROW_FLIGHT=OFF [default=OFF]
-- Build the Arrow Flight RPC System (requires GRPC, Protocol Buffers)
-- ARROW_GANDIVA=OFF [default=OFF]
-- Build the Gandiva libraries
-- ARROW_HDFS=OFF [default=OFF]
-- Build the Arrow HDFS bridge
-- ARROW_HIVESERVER2=OFF [default=OFF]
-- Build the HiveServer2 client and Arrow adapter
-- ARROW_IPC=ON [default=ON]
-- Build the Arrow IPC extensions
-- ARROW_JEMALLOC=ON [default=ON]
-- Build the Arrow jemalloc-based allocator
-- ARROW_JNI=OFF [default=OFF]
-- Build the Arrow JNI lib
-- ARROW_JSON=ON [default=OFF]
-- Build Arrow with JSON support (requires RapidJSON)
-- ARROW_MIMALLOC=OFF [default=OFF]
-- Build the Arrow mimalloc-based allocator
-- ARROW_PARQUET=ON [default=OFF]
-- Build the Parquet libraries
-- ARROW_ORC=OFF [default=OFF]
-- Build the Arrow ORC adapter
-- ARROW_PLASMA=OFF [default=OFF]
-- Build the plasma object store along with Arrow
-- ARROW_PLASMA_JAVA_CLIENT=OFF [default=OFF]
-- Build the plasma object store java client
-- ARROW_PYTHON=OFF [default=OFF]
-- Build the Arrow CPython extensions
-- ARROW_S3=OFF [default=OFF]
-- Build Arrow with S3 support (requires the AWS SDK for C++)
-- ARROW_TENSORFLOW=OFF [default=OFF]
-- Build Arrow with TensorFlow support enabled
-- ARROW_TESTING=OFF [default=OFF]
-- Build the Arrow testing libraries
--
-- Thirdparty toolchain options:
--
-- ARROW_DEPENDENCY_SOURCE=BUNDLED [default=AUTO|BUNDLED|SYSTEM|CONDA|BREW]
-- Method to use for acquiring arrow's build dependencies
-- ARROW_VERBOSE_THIRDPARTY_BUILD=OFF [default=OFF]
-- Show output from ExternalProjects rather than just logging to files
-- ARROW_DEPENDENCY_USE_SHARED=ON [default=ON]
-- Link to shared libraries
-- ARROW_BOOST_USE_SHARED=OFF [default=ON]
-- Rely on boost shared libraries where relevant
-- ARROW_BROTLI_USE_SHARED=ON [default=ON]
-- Rely on Brotli shared libraries where relevant
-- ARROW_BZ2_USE_SHARED=ON [default=ON]
-- Rely on Bz2 shared libraries where relevant
-- ARROW_GFLAGS_USE_SHARED=ON [default=ON]
-- Rely on GFlags shared libraries where relevant
-- ARROW_GRPC_USE_SHARED=ON [default=ON]
-- Rely on gRPC shared libraries where relevant
-- ARROW_LZ4_USE_SHARED=ON [default=ON]
-- Rely on lz4 shared libraries where relevant
-- ARROW_OPENSSL_USE_SHARED=ON [default=ON]
-- Rely on OpenSSL shared libraries where relevant
-- ARROW_PROTOBUF_USE_SHARED=ON [default=ON]
-- Rely on Protocol Buffers shared libraries where relevant
-- ARROW_THRIFT_USE_SHARED=ON [default=ON]
-- Rely on thrift shared libraries where relevant
-- ARROW_UTF8PROC_USE_SHARED=ON [default=ON]
-- Rely on utf8proc shared libraries where relevant
-- ARROW_SNAPPY_USE_SHARED=ON [default=ON]
-- Rely on snappy shared libraries where relevant
-- ARROW_UTF8PROC_USE_SHARED=ON [default=ON]
-- Rely on utf8proc shared libraries where relevant
-- ARROW_ZSTD_USE_SHARED=ON [default=ON]
-- Rely on zstd shared libraries where relevant
-- ARROW_USE_GLOG=OFF [default=OFF]
-- Build libraries with glog support for pluggable logging
-- ARROW_WITH_BACKTRACE=ON [default=ON]
-- Build with backtrace support
-- ARROW_WITH_BROTLI=ON [default=OFF]
-- Build with Brotli compression
-- ARROW_WITH_BZ2=ON [default=OFF]
-- Build with BZ2 compression
-- ARROW_WITH_LZ4=ON [default=OFF]
-- Build with lz4 compression
-- ARROW_WITH_SNAPPY=ON [default=OFF]
-- Build with Snappy compression
-- ARROW_WITH_ZLIB=ON [default=OFF]
-- Build with zlib compression
-- ARROW_WITH_ZSTD=ON [default=OFF]
-- Build with zstd compression
-- ARROW_WITH_UTF8PROC=OFF [default=ON]
-- Build with support for Unicode properties using the utf8proc library
--
-- Parquet options:
--
-- PARQUET_MINIMAL_DEPENDENCY=OFF [default=OFF]
-- Depend only on Thirdparty headers to build libparquet.
-- Always OFF if building binaries
-- PARQUET_BUILD_EXECUTABLES=OFF [default=OFF]
-- Build the Parquet executable CLI tools. Requires static libraries to be built.
-- PARQUET_BUILD_EXAMPLES=OFF [default=OFF]
-- Build the Parquet examples. Requires static libraries to be built.
-- PARQUET_REQUIRE_ENCRYPTION=OFF [default=OFF]
-- Build support for encryption. Fail if OpenSSL is not found
--
-- Gandiva options:
--
-- ARROW_GANDIVA_JAVA=OFF [default=OFF]
-- Build the Gandiva JNI wrappers
-- ARROW_GANDIVA_STATIC_LIBSTDCPP=OFF [default=OFF]
-- Include -static-libstdc++ -static-libgcc when linking with
-- Gandiva static libraries
-- ARROW_GANDIVA_PC_CXX_FLAGS="" [default=""]
-- Compiler flags to append when pre-compiling Gandiva operations
--
-- Advanced developer options:
--
-- ARROW_EXTRA_ERROR_CONTEXT=OFF [default=OFF]
-- Compile with extra error context (line numbers, code)
-- ARROW_OPTIONAL_INSTALL=OFF [default=OFF]
-- If enabled install ONLY targets that have already been built. Please be
-- advised that if this is enabled 'install' will fail silently on components
-- that have not been built
-- Outputting build configuration summary to /tmp/Rtmp65d0fd/file25c9fe7f169a/cmake_summary.json
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/Rtmp65d0fd/file25c9fe7f169a
+ /tmp/Rtmp65d0fd/file25c9f44ecaba6/cmake-3.18.1-Linux-x86_64/bin/cmake --build . --target install
Scanning dependencies of target boost_ep
Scanning dependencies of target jemalloc_ep
[ 1%] Creating directories for 'boost_ep'
[ 2%] Creating directories for 'jemalloc_ep'
[ 2%] Performing download step (download, verify and extract) for 'boost_ep'
[ 2%] Performing download step (download, verify and extract) for 'jemalloc_ep'
-- jemalloc_ep download command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/jemalloc_ep-prefix/src/jemalloc_ep-stamp/jemalloc_ep-download-*.log
[ 3%] No update step for 'jemalloc_ep'
[ 4%] Performing patch step for 'jemalloc_ep'
[ 5%] Performing configure step for 'jemalloc_ep'
-- boost_ep download command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/boost_ep-prefix/src/boost_ep-stamp/boost_ep-download-*.log
[ 6%] No update step for 'boost_ep'
[ 7%] No patch step for 'boost_ep'
[ 8%] Performing configure step for 'boost_ep'
-- jemalloc_ep configure command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/jemalloc_ep-prefix/src/jemalloc_ep-stamp/jemalloc_ep-configure-*.log
[ 9%] Performing build step for 'jemalloc_ep'
-- boost_ep configure command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/boost_ep-prefix/src/boost_ep-stamp/boost_ep-configure-*.log
[ 10%] Performing build step for 'boost_ep'
-- boost_ep build command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/boost_ep-prefix/src/boost_ep-stamp/boost_ep-build-*.log
[ 11%] No install step for 'boost_ep'
[ 12%] Completed 'boost_ep'
[ 12%] Built target boost_ep
Scanning dependencies of target zstd_ep
[ 12%] Creating directories for 'zstd_ep'
[ 13%] Performing download step (download, verify and extract) for 'zstd_ep'
-- zstd_ep download command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/zstd_ep-prefix/src/zstd_ep-stamp/zstd_ep-download-*.log
[ 14%] No update step for 'zstd_ep'
[ 15%] No patch step for 'zstd_ep'
[ 16%] Performing configure step for 'zstd_ep'
-- zstd_ep configure command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/zstd_ep-prefix/src/zstd_ep-stamp/zstd_ep-configure-*.log
[ 17%] Performing build step for 'zstd_ep'
-- zstd_ep build command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/zstd_ep-prefix/src/zstd_ep-stamp/zstd_ep-build-*.log
[ 18%] Performing install step for 'zstd_ep'
-- zstd_ep install command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/zstd_ep-prefix/src/zstd_ep-stamp/zstd_ep-install-*.log
[ 19%] Completed 'zstd_ep'
[ 19%] Built target zstd_ep
Scanning dependencies of target snappy_ep
[ 19%] Creating directories for 'snappy_ep'
[ 20%] Performing download step (download, verify and extract) for 'snappy_ep'
-- snappy_ep download command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/snappy_ep-prefix/src/snappy_ep-stamp/snappy_ep-download-*.log
[ 21%] No update step for 'snappy_ep'
[ 22%] No patch step for 'snappy_ep'
[ 23%] Performing configure step for 'snappy_ep'
-- snappy_ep configure command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/snappy_ep-prefix/src/snappy_ep-stamp/snappy_ep-configure-*.log
[ 24%] Performing build step for 'snappy_ep'
-- snappy_ep build command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/snappy_ep-prefix/src/snappy_ep-stamp/snappy_ep-build-*.log
[ 25%] Performing install step for 'snappy_ep'
-- snappy_ep install command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/snappy_ep-prefix/src/snappy_ep-stamp/snappy_ep-install-*.log
[ 26%] Completed 'snappy_ep'
[ 26%] Built target snappy_ep
Scanning dependencies of target brotli_ep
[ 27%] Creating directories for 'brotli_ep'
[ 28%] Performing download step (download, verify and extract) for 'brotli_ep'
-- brotli_ep download command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/brotli_ep-prefix/src/brotli_ep-stamp/brotli_ep-download-*.log
[ 29%] No update step for 'brotli_ep'
[ 30%] No patch step for 'brotli_ep'
[ 31%] Performing configure step for 'brotli_ep'
-- brotli_ep configure command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/brotli_ep-prefix/src/brotli_ep-stamp/brotli_ep-configure-*.log
[ 31%] Performing build step for 'brotli_ep'
-- brotli_ep build command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/brotli_ep-prefix/src/brotli_ep-stamp/brotli_ep-build-*.log
[ 31%] Performing install step for 'brotli_ep'
-- brotli_ep install command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/brotli_ep-prefix/src/brotli_ep-stamp/brotli_ep-install-*.log
[ 32%] Completed 'brotli_ep'
[ 32%] Built target brotli_ep
Scanning dependencies of target thrift_ep
[ 33%] Creating directories for 'thrift_ep'
[ 34%] Performing download step (download, verify and extract) for 'thrift_ep'
-- thrift_ep download command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/thrift_ep-prefix/src/thrift_ep-stamp/thrift_ep-download-*.log
[ 35%] No update step for 'thrift_ep'
[ 36%] No patch step for 'thrift_ep'
[ 36%] Performing configure step for 'thrift_ep'
-- jemalloc_ep build command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/jemalloc_ep-prefix/src/jemalloc_ep-stamp/jemalloc_ep-build-*.log
[ 37%] Performing install step for 'jemalloc_ep'
-- jemalloc_ep install command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/jemalloc_ep-prefix/src/jemalloc_ep-stamp/jemalloc_ep-install-*.log
[ 38%] Completed 'jemalloc_ep'
[ 38%] Built target jemalloc_ep
Scanning dependencies of target rapidjson_ep
[ 39%] Creating directories for 'rapidjson_ep'
[ 40%] Performing download step (download, verify and extract) for 'rapidjson_ep'
-- rapidjson_ep download command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/src/rapidjson_ep-stamp/rapidjson_ep-download-*.log
[ 40%] No update step for 'rapidjson_ep'
[ 41%] No patch step for 'rapidjson_ep'
[ 42%] Performing configure step for 'rapidjson_ep'
-- rapidjson_ep configure command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/src/rapidjson_ep-stamp/rapidjson_ep-configure-*.log
[ 43%] Performing build step for 'rapidjson_ep'
-- rapidjson_ep build command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/src/rapidjson_ep-stamp/rapidjson_ep-build-*.log
[ 44%] Performing install step for 'rapidjson_ep'
-- rapidjson_ep install command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/src/rapidjson_ep-stamp/rapidjson_ep-install-*.log
[ 45%] Completed 'rapidjson_ep'
[ 45%] Built target rapidjson_ep
Scanning dependencies of target bzip2_ep
[ 46%] Creating directories for 'bzip2_ep'
[ 47%] Performing download step (download, verify and extract) for 'bzip2_ep'
-- bzip2_ep download command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/bzip2_ep-prefix/src/bzip2_ep-stamp/bzip2_ep-download-*.log
[ 48%] No update step for 'bzip2_ep'
[ 48%] No patch step for 'bzip2_ep'
[ 49%] No configure step for 'bzip2_ep'
[ 50%] Performing build step for 'bzip2_ep'
-- thrift_ep configure command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/thrift_ep-prefix/src/thrift_ep-stamp/thrift_ep-configure-*.log
[ 51%] Performing build step for 'thrift_ep'
-- bzip2_ep build command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/bzip2_ep-prefix/src/bzip2_ep-stamp/bzip2_ep-build-*.log
[ 52%] Performing install step for 'bzip2_ep'
-- bzip2_ep install command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/bzip2_ep-prefix/src/bzip2_ep-stamp/bzip2_ep-install-*.log
[ 53%] Completed 'bzip2_ep'
[ 53%] Built target bzip2_ep
Scanning dependencies of target zlib_ep
[ 54%] Creating directories for 'zlib_ep'
[ 55%] Performing download step (download, verify and extract) for 'zlib_ep'
-- zlib_ep download command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/zlib_ep-prefix/src/zlib_ep-stamp/zlib_ep-download-*.log
[ 55%] No update step for 'zlib_ep'
[ 56%] No patch step for 'zlib_ep'
[ 57%] Performing configure step for 'zlib_ep'
-- zlib_ep configure command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/zlib_ep-prefix/src/zlib_ep-stamp/zlib_ep-configure-*.log
[ 58%] Performing build step for 'zlib_ep'
-- zlib_ep build command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/zlib_ep-prefix/src/zlib_ep-stamp/zlib_ep-build-*.log
[ 59%] Performing install step for 'zlib_ep'
-- zlib_ep install command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/zlib_ep-prefix/src/zlib_ep-stamp/zlib_ep-install-*.log
[ 60%] Completed 'zlib_ep'
[ 60%] Built target zlib_ep
Scanning dependencies of target lz4_ep
[ 61%] Creating directories for 'lz4_ep'
[ 62%] Performing download step (download, verify and extract) for 'lz4_ep'
-- lz4_ep download command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/lz4_ep-prefix/src/lz4_ep-stamp/lz4_ep-download-*.log
[ 63%] Performing update step for 'lz4_ep'
[ 64%] No patch step for 'lz4_ep'
[ 65%] No configure step for 'lz4_ep'
[ 65%] Performing build step for 'lz4_ep'
-- lz4_ep build command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/lz4_ep-prefix/src/lz4_ep-stamp/lz4_ep-build-*.log
[ 65%] No install step for 'lz4_ep'
[ 66%] Completed 'lz4_ep'
[ 66%] Built target lz4_ep
Scanning dependencies of target arrow_dataset_objlib
[ 67%] Building CXX object src/arrow/dataset/CMakeFiles/arrow_dataset_objlib.dir/Unity/unity_1_cxx.cxx.o
[ 68%] Building CXX object src/arrow/dataset/CMakeFiles/arrow_dataset_objlib.dir/Unity/unity_0_cxx.cxx.o
-- thrift_ep build command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/thrift_ep-prefix/src/thrift_ep-stamp/thrift_ep-build-*.log
[ 69%] Performing install step for 'thrift_ep'
-- thrift_ep install command succeeded. See also /tmp/Rtmp65d0fd/file25c9fe7f169a/thrift_ep-prefix/src/thrift_ep-stamp/thrift_ep-install-*.log
[ 69%] Completed 'thrift_ep'
[ 69%] Built target thrift_ep
Scanning dependencies of target toolchain
[ 69%] Built target toolchain
Scanning dependencies of target arrow_bundled_dependencies
[ 69%] Bundling /tmp/Rtmp65d0fd/file25c9fe7f169a/release/libarrow_bundled_dependencies.a
[ 69%] Built target arrow_bundled_dependencies
Scanning dependencies of target arrow_dependencies
[ 69%] Built target arrow_dependencies
Scanning dependencies of target arrow_objlib
[ 70%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_19_cxx.cxx.o
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[ 71%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_18_cxx.cxx.o
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[ 73%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_15_cxx.cxx.o
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[ 76%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_12_cxx.cxx.o
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In file included from /tmp/Rtmp65d0fd/file25c9fe7f169a/src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_12_cxx.cxx:4:
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/csv/converter.cc: In member function ‘arrow::Result<std::shared_ptr<arrow::Array> > arrow::csv::{anonymous}::PrimitiveConverter<T, ValueDecoderType>::Convert(const arrow::csv::BlockParser&, int32_t) [with T = arrow::BooleanType; ValueDecoderType = arrow::csv::{anonymous}::BooleanValueDecoder]’:
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/csv/converter.cc:434:18: warning: ‘value’ may be used uninitialized in this function [-Wmaybe-uninitialized]
 value_type value;
 ^~~~~
In file included from /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/array/builder_base.h:30,
 from /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/array/builder_adaptive.h:25,
 from /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/builder.h:22,
 from /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/csv/converter.cc:27,
 from /tmp/Rtmp65d0fd/file25c9fe7f169a/src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_12_cxx.cxx:4:
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/buffer_builder.h: In member function ‘arrow::Result<std::shared_ptr<arrow::Array> > arrow::csv::{anonymous}::PrimitiveConverter<T, ValueDecoderType>::Convert(const arrow::csv::BlockParser&, int32_t) [with T = arrow::FixedSizeBinaryType; ValueDecoderType = arrow::csv::{anonymous}::FixedSizeBinaryValueDecoder]’:
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/buffer_builder.h:136:11: warning: ‘value’ may be used uninitialized in this function [-Wmaybe-uninitialized]
 memcpy(data_ + size_, data, static_cast<size_t>(length));
 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /tmp/Rtmp65d0fd/file25c9fe7f169a/src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_12_cxx.cxx:4:
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/csv/converter.cc:434:18: note: ‘value’ was declared here
 value_type value;
 ^~~~~
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/csv/converter.cc: In member function ‘arrow::Result<std::shared_ptr<arrow::Array> > arrow::csv::{anonymous}::PrimitiveConverter<T, ValueDecoderType>::Convert(const arrow::csv::BlockParser&, int32_t) [with T = arrow::TimestampType; ValueDecoderType = arrow::csv::{anonymous}::InlineISO8601ValueDecoder]’:
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/csv/converter.cc:434:18: warning: ‘value’ may be used uninitialized in this function [-Wmaybe-uninitialized]
In file included from /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/array/builder_base.h:30,
 from /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/array/builder_adaptive.h:25,
 from /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/builder.h:22,
 from /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/csv/converter.cc:27,
 from /tmp/Rtmp65d0fd/file25c9fe7f169a/src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_12_cxx.cxx:4:
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/buffer_builder.h: In member function ‘arrow::Result<std::shared_ptr<arrow::Array> > arrow::csv::{anonymous}::PrimitiveConverter<T, ValueDecoderType>::Convert(const arrow::csv::BlockParser&, int32_t) [with T = arrow::UInt16Type; ValueDecoderType = arrow::csv::{anonymous}::NumericValueDecoder<arrow::UInt16Type>]’:
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/buffer_builder.h:136:11: warning: ‘value’ may be used uninitialized in this function [-Wmaybe-uninitialized]
 memcpy(data_ + size_, data, static_cast<size_t>(length));
 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /tmp/Rtmp65d0fd/file25c9fe7f169a/src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_12_cxx.cxx:4:
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/csv/converter.cc:434:18: note: ‘value’ was declared here
 value_type value;
 ^~~~~
In file included from /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/array/builder_base.h:30,
 from /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/array/builder_adaptive.h:25,
 from /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/builder.h:22,
 from /tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/csv/converter.cc:27,
 from /tmp/Rtmp65d0fd/file25c9fe7f169a/src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_12_cxx.cxx:4:
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/buffer_builder.h: In member function ‘arrow::Result<std::shared_ptr<arrow::Array> > arrow::csv::{anonymous}::PrimitiveConverter<T, ValueDecoderType>::Convert(const arrow::csv::BlockParser&, int32_t) [with T = arrow::UInt8Type; ValueDecoderType = arrow::csv::{anonymous}::NumericValueDecoder<arrow::UInt8Type>]’:
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/buffer_builder.h:136:11: warning: ‘value’ may be used uninitialized in this function [-Wmaybe-uninitialized]
 memcpy(data_ + size_, data, static_cast<size_t>(length));
 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /tmp/Rtmp65d0fd/file25c9fe7f169a/src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_12_cxx.cxx:4:
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/csv/converter.cc:434:18: note: ‘value’ was declared here
 value_type value;
 ^~~~~
[ 79%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_8_cxx.cxx.o
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/csv/converter.cc: In member function ‘arrow::Result<std::shared_ptr<arrow::Array> > arrow::csv::{anonymous}::TypedDictionaryConverter<T, ValueDecoderType>::Convert(const arrow::csv::BlockParser&, int32_t) [with T = arrow::FixedSizeBinaryType; ValueDecoderType = arrow::csv::{anonymous}::FixedSizeBinaryValueDecoder ’:
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/csv/converter.cc:480:18: warning: ‘value’ may be used uninitialized in this function [-Wmaybe-uninitialized]
 value_type value;
 ^~~~~
[ 80%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_7_cxx.cxx.o
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In file included from /tmp/Rtmp65d0fd/file25c9fe7f169a/src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_4_cxx.cxx:6:
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/tensor.cc: In member function ‘arrow::Result<long int> arrow::Tensor::CountNonZero() const’:
/tmp/Rtmp65d0fd/file25c9f5e593726/apache-arrow-2.0.0/cpp/src/arrow/tensor.cc:283:18: warning: ‘*((void*)& counter +8)’ may be used uninitialized in this function [-Wmaybe-uninitialized]
 NonZeroCounter counter(*this);
 ^~~~~~~
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^[^[[ 85%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_1_cxx.cxx.o
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[ 89%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/vendored/datetime/tz.cpp.o
[ 90%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/util/bpacking_avx2.cc.o
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Scanning dependencies of target arrow_static
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Install the project...
-- Install configuration: "RELEASE"
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/util/config.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/share/doc/arrow/LICENSE.txt
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/share/doc/arrow/NOTICE.txt
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/share/doc/arrow/README.md
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/libarrow.a
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/cmake/arrow/FindArrow.cmake
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/cmake/arrow/ArrowTargets.cmake
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-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/cmake/arrow/ArrowConfig.cmake
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/cmake/arrow/ArrowConfigVersion.cmake
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-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/dataset/filter.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/dataset/partition.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/dataset/pch.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/dataset/projector.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/dataset/scanner.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/dataset/test_util.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/dataset/type_fwd.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/dataset/visibility.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/libarrow_dataset.a
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/cmake/arrow/FindArrowDataset.cmake
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/cmake/arrow/ArrowDatasetTargets.cmake
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/cmake/arrow/ArrowDatasetTargets-release.cmake
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/cmake/arrow/ArrowDatasetConfig.cmake
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/cmake/arrow/ArrowDatasetConfigVersion.cmake
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/pkgconfig/arrow-dataset.pc
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/filesystem/api.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/filesystem/filesystem.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/filesystem/hdfs.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/filesystem/localfs.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/filesystem/mockfs.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/filesystem/path_forest.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/filesystem/path_util.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/filesystem/s3_test_util.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/filesystem/s3fs.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/filesystem/test_util.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/filesystem/type_fwd.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/pkgconfig/arrow-filesystem.pc
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/ipc/api.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/ipc/dictionary.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/ipc/feather.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/ipc/json_simple.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/ipc/message.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/ipc/options.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/ipc/reader.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/ipc/test_common.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/ipc/type_fwd.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/ipc/util.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/ipc/writer.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/json/api.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/json/chunked_builder.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/json/chunker.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/json/converter.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/json/options.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/json/parser.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/json/rapidjson_defs.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/json/reader.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/arrow/json/test_common.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/pkgconfig/arrow-json.pc
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/libparquet.a
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/cmake/arrow/FindParquet.cmake
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/cmake/arrow/ParquetTargets.cmake
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/cmake/arrow/ParquetTargets-release.cmake
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/cmake/arrow/ParquetConfig.cmake
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/cmake/arrow/ParquetConfigVersion.cmake
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib/pkgconfig/parquet.pc
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/bloom_filter.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/column_page.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/column_reader.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/column_scanner.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/column_writer.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/deprecated_io.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/encoding.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/encryption.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/exception.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/file_reader.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/file_writer.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/hasher.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/level_comparison.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/level_comparison_inc.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/level_conversion.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/level_conversion_inc.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/metadata.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/murmur3.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/pch.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/platform.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/printer.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/properties.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/schema.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/statistics.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/stream_reader.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/stream_writer.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/test_encryption_util.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/test_util.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/type_fwd.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/types.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/windows_compatibility.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/parquet_version.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/api/io.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/api/reader.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/api/schema.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/api/writer.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/arrow/reader.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/arrow/schema.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/arrow/test_util.h
-- Installing: /tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include/parquet/arrow/writer.h
+ popd
/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow
PKG_CFLAGS=-I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW
PKG_LIBS=-L/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib -larrow_dataset -lparquet -larrow -larrow -larrow_bundled_dependencies -larrow_dataset -lparquet
** libs
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c array.cpp -o array.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c array_from_vector.cpp -o array_from_vector.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c array_to_vector.cpp -o array_to_vector.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c arraydata.cpp -o arraydata.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c arrowExports.cpp -o arrowExports.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c buffer.cpp -o buffer.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c chunkedarray.cpp -o chunkedarray.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c compression.cpp -o compression.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c compute.cpp -o compute.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c csv.cpp -o csv.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c dataset.cpp -o dataset.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c datatype.cpp -o datatype.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c expression.cpp -o expression.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c feather.cpp -o feather.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c field.cpp -o field.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c filesystem.cpp -o filesystem.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c imports.cpp -o imports.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c io.cpp -o io.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/
home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c json.cpp -o json.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/
home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c memorypool.cpp -o memorypool.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/
home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c message.cpp -o message.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c parquet.cpp -o parquet.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c py-to-r.cpp -o py-to-r.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c recordbatch.cpp -o recordbatch.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c recordbatchreader.cpp -o recordbatchreader.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c recordbatchwriter.cpp -o recordbatchwriter.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c scalar.cpp -o scalar.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c schema.cpp -o schema.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c symbols.cpp -o symbols.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c table.cpp -o table.o
g++ -std=gnu++11 -I"/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/include" -DNDEBUG -I/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/include -DARROW_R_WITH_ARROW -I'/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/cpp11/include' -O3 -mtune=native -fpic -g -O2 -c threadpool.cpp -o threadpool.o
g++ -std=gnu++11 -shared -L/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/lib -L/usr/local/lib64 -o arrow.so array.o array_from_vector.o array_to_vector.o arraydata.o arrowExports.o buffer.o chunkedarray.o compression.o compute.o csv.o dataset.o datatype.o expression.o feather.o field.o filesystem.o imports.o io.o json.o memorypool.o message.o parquet.o py-to-r.o recordbatch.o recordbatchreader.o recordbatchwriter.o scalar.o schema.o symbols.o table.o threadpool.o -L/tmp/RtmpBTZToA/R.INSTALL25c8a75913e4b/arrow/libarrow/arrow-2.0.0/lib -larrow_dataset -lparquet -larrow -larrow -larrow_bundled_dependencies -larrow_dataset -lparquet -L/sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/lib -lR
installing to /home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/00LOCK-arrow/00new/arrow/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (arrow)
The downloaded source packages are in
 ‘/tmp/RtmpNoQSc4/downloaded_packages’
{code}
 

And here are some directories
{code:java}
[yihsiao@gl-login2 ~]$ ls /home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/00LOCK-arrow/00new/arrow/libs
ls: cannot access /home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/00LOCK-arrow/00new/arrow/libs: No such file or directory
[yihsiao@gl-login2 ~]$ ls /home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/00LOCK-arrow/00new/arrow
ls: cannot access /home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/00LOCK-arrow/00new/arrow: No such file or directory
[yihsiao@gl-login2 ~]$ ls /home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/00LOCK-arrow/00new
ls: cannot access /home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/00LOCK-arrow/00new: No such file or directory
[yihsiao@gl-login2 ~]$ ls /home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/00LOCK-arrow/
arrow
[yihsiao@gl-login2 ~]$ ls /home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/00LOCK-arrow/arrow/
libs
[yihsiao@gl-login2 ~]$ ls /home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0/00LOCK-arrow/arrow/libs/
[yihsiao@gl-login2 ~]$ ls ~/R/x86_64-pc-linux-gnu-library/4.0/arrow/
build_arrow_static.sh demo_flight_server.py DESCRIPTION doc help html INDEX libs Meta NAMESPACE NEWS.md NOTICE.txt R v0.7.1.parquet
[yihsiao@gl-login2 ~]$ ls ~/R/x86_64-pc-linux-gnu-library/4.0/arrow/libs/
arrow.so{code}
Thank you!

 

 

> [R] Can't get the required C++ run time library installed correctly
> -------------------------------------------------------------------
>
>                 Key: ARROW-10856
>                 URL: https://issues.apache.org/jira/browse/ARROW-10856
>             Project: Apache Arrow
>          Issue Type: Bug
>          Components: R
>            Reporter: Yi Hsiao
>            Priority: Major
>         Attachments: image-2020-12-09-19-04-02-885.png
>
>
> When I tried to use the example command like this in my R session:
> {code:java}
> df <- read_parquet(system.file("v0.7.1.parquet", package="arrow")){code}
>  
> It shows error:
> {code:java}
> > df <- read_parquet(system.file("v0.7.1.parquet", package="arrow"))
> Error in io___MemoryMappedFile__Open(path, mode) :
>  Cannot call io___MemoryMappedFile__Open(). Please use arrow::install_arrow() to install required runtime libraries.{code}
> I did try to install it with `arrow::install_arrow()` and it finishes successfully.
> However, I still get the same error message mentioned above after that.
> My session info is here:
>  
> {code:java}
> > sessioninfo::session_info()
> ─ Session info ───────────────────────────────────────────────────────────────
>  setting value
>  version R version 4.0.2 (2020-06-22)
>  os CentOS Linux 7 (Core)
>  system x86_64, linux-gnu
>  ui X11
>  language (EN)
>  collate en_US.UTF-8
>  ctype en_US.UTF-8
>  tz America/Detroit
>  date 2020-12-08
> ─ Packages ───────────────────────────────────────────────────────────────────
>  package * version date lib source
>  arrow * 2.0.0 2020-10-20 [1] CRAN (R 4.0.2)
>  assertthat 0.2.1 2019-03-21 [1] CRAN (R 4.0.2)
>  bit 4.0.4 2020-08-04 [1] CRAN (R 4.0.2)
>  bit64 4.0.5 2020-08-30 [1] CRAN (R 4.0.2)
>  cli 2.2.0 2020-11-20 [1] CRAN (R 4.0.2)
>  crayon 1.3.4 2017-09-16 [1] CRAN (R 4.0.2)
>  fansi 0.4.1 2020-01-08 [1] CRAN (R 4.0.2)
>  glue 1.4.2 2020-08-27 [1] CRAN (R 4.0.2)
>  magrittr 2.0.1 2020-11-17 [1] CRAN (R 4.0.2)
>  purrr 0.3.4 2020-04-17 [1] CRAN (R 4.0.2)
>  R6 2.5.0 2020-10-28 [1] CRAN (R 4.0.2)
>  rlang 0.4.9 2020-11-26 [1] CRAN (R 4.0.2)
>  sessioninfo 1.1.1 2018-11-05 [1] CRAN (R 4.0.2)
>  tidyselect 1.1.0 2020-05-11 [1] CRAN (R 4.0.2)
>  vctrs 0.3.5 2020-11-17 [1] CRAN (R 4.0.2)
>  withr 2.3.0 2020-09-22 [1] CRAN (R 4.0.2)
> [1] /home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0
> [2] /sw/arcts/centos7/stacks/gcc/8.2.0/R/4.0.2/lib64/R/library
> {code}
>  
> One thing I notice is that when installing the run time library, it doesn't get the correct compiler I have for C++ (8.2.0 rather than some version < 4.9)
>  
> {code:java}
> > arrow::install_arrow()
> Installing package into '/home/yihsiao/R/x86_64-pc-linux-gnu-library/4.0'
> (as 'lib' is unspecified)
> trying URL 'https://cloud.r-project.org/src/contrib/arrow_2.0.0.tar.gz'
> Content type 'application/x-gzip' length 322592 bytes (315 KB)
> ==================================================
> downloaded 315 KB
> * installing *source* package 'arrow' ...
> ** package 'arrow' successfully unpacked and MD5 sums checked
> ** using staged installation
> *** No C++ binaries found for centos-7
> *** Successfully retrieved C++ source
> *** Building C++ libraries
> **** cmake
> **** S3 support not available for gcc < 4.9; building with ARROW_S3=OFF
> **** arrow
> {code}
>  
>  



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