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Posted to dev@marmotta.apache.org by "Colin Maudry (JIRA)" <ji...@apache.org> on 2014/10/04 02:26:34 UTC

[jira] [Commented] (MARMOTTA-547) Test Configuration fails when switching from h2 to postgres

    [ https://issues.apache.org/jira/browse/MARMOTTA-547?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=14158786#comment-14158786 ] 

Colin Maudry commented on MARMOTTA-547:
---------------------------------------

Same symptoms when switching from h2 to mysql.

> Test Configuration fails when switching from h2 to postgres
> -----------------------------------------------------------
>
>                 Key: MARMOTTA-547
>                 URL: https://issues.apache.org/jira/browse/MARMOTTA-547
>             Project: Marmotta
>          Issue Type: Bug
>          Components: KiWi Triple Store
>    Affects Versions: 3.2.1
>         Environment: Windows 8.1 64bits, Java 7.0.67 32bits
>            Reporter: Colin Maudry
>             Fix For: 3.3.0
>
>
> In order to improve performance, I wanted to switch to postrgres data base.
> 1. I opened "Storage backend: KiWi > Database"
> 2. Switch from h2 to postgres
> 3. Click on Test Configuration
> I get a error message in Firefox:
> Internal Server Error(500):
> Could not find MessageBodyWriter for response object of type: org.apache.marmotta.platform.core.jaxrs.exceptionmappers.ErrorResponse of media type: application/octet-stream
> Here is the trace:
> Oct 04, 2014 2:23:17 AM org.apache.coyote.AbstractProtocol init
> INFO: Initializing ProtocolHandler ["http-bio-8080"]
> Oct 04, 2014 2:23:17 AM org.apache.coyote.AbstractProtocol init
> INFO: Initializing ProtocolHandler ["ajp-bio-8009"]
> Oct 04, 2014 2:23:17 AM org.apache.catalina.startup.Catalina load
> INFO: Initialization processed in 895 ms
> Oct 04, 2014 2:23:17 AM org.apache.catalina.core.StandardService startInternal
> INFO: Starting service Catalina
> Oct 04, 2014 2:23:17 AM org.apache.catalina.core.StandardEngine startInternal
> INFO: Starting Servlet Engine: Apache Tomcat/7.0.39
> Oct 04, 2014 2:23:17 AM org.apache.marmotta.splash.ProgressListener lifecycleEvent
> INFO: starting host instance
> Oct 04, 2014 2:23:17 AM org.apache.catalina.startup.HostConfig deployDirectory
> INFO: Deploying web application directory C:\Users\colin\programs\marmotta\apache-tomcat-7.0.39\webapps\docs
> Oct 04, 2014 2:23:17 AM org.apache.marmotta.splash.common.MarmottaContext <init>
> INFO: instantiated new Marmotta/Tomcat webapp context (null)...
> Oct 04, 2014 2:23:17 AM org.apache.catalina.util.SessionIdGenerator createSecureRandom
> INFO: Creation of SecureRandom instance for session ID generation using [SHA1PRNG] took [135] milliseconds.
> Oct 04, 2014 2:23:18 AM org.apache.catalina.startup.HostConfig deployDirectory
> INFO: Deploying web application directory C:\Users\colin\programs\marmotta\apache-tomcat-7.0.39\webapps\examples
> Oct 04, 2014 2:23:18 AM org.apache.marmotta.splash.common.MarmottaContext <init>
> INFO: instantiated new Marmotta/Tomcat webapp context (null)...
> Oct 04, 2014 2:23:18 AM org.apache.catalina.startup.HostConfig deployDirectory
> INFO: Deploying web application directory C:\Users\colin\programs\marmotta\apache-tomcat-7.0.39\webapps\host-manager
> Oct 04, 2014 2:23:18 AM org.apache.catalina.startup.HostConfig deployDirectory
> INFO: Deploying web application directory C:\Users\colin\programs\marmotta\apache-tomcat-7.0.39\webapps\manager
> Oct 04, 2014 2:23:18 AM org.apache.catalina.startup.HostConfig deployDirectory
> INFO: Deploying web application directory C:\Users\colin\programs\marmotta\apache-tomcat-7.0.39\webapps\marmotta
> 02:23:22.198 INFO  - WELD-000900: 2.1.2 (Final)
> 02:23:22.221 INFO  - JNDI: registering Apache Marmotta JNDI implementation ...
> 02:23:22.557 INFO  - JNDI: initialising Apache Marmotta Context Factory ...
> 02:23:22.562 INFO  - JNDI: creating Apache Marmotta Initial Context ...
> 02:23:22.719 INFO  - WELD-000101: Transactional services not available. Injection of @Inject UserTransaction not available. Transactional observers wi
> ll be invoked synchronously.
> 02:23:24.532 INFO  - Tomcat 7+ detected, CDI injection will be available in Servlets and Filters. Injection into Listeners is not supported
> 02:23:24.921 WARN  - WELD-001700: Interceptor annotation class javax.ejb.PostActivate not found, interception based on it is not enabled
> 02:23:24.923 WARN  - WELD-001700: Interceptor annotation class javax.ejb.PrePassivate not found, interception based on it is not enabled
> 02:23:25.377 INFO  - Apache Marmotta Core Version 3.2.1 starting up ...
> 02:23:25.378 INFO  - Build Information:
> 02:23:25.379 INFO  -  - Build User: Jakob Frank <ja...@apache.org>
> 02:23:25.379 INFO  -  - Build Host: T440p
> 02:23:25.381 INFO  -  - Build Time: Tue, 20 May 2014 09:45:37 CEST
> 02:23:25.382 INFO  -  - Build OS:   Linux 3.13.0-24-generic/amd64
> 02:23:25.382 INFO  -  - Revision:   git:1d73c3
> 02:23:25.391 INFO  - Configured working directory C:\Users\colin\programs\marmotta\marmotta-home from environment variable MARMOTTA_HOME
> 02:23:25.392 INFO  - Apache Marmotta Configuration Service starting up ...
> 02:23:25.394 INFO  - Apache Marmotta running on Apache Tomcat 7.x
> 02:23:25.395 INFO  - reading system configuration from existing configuration file C:\Users\colin\programs\marmotta\marmotta-home\system-config.proper
> ties
> 02:23:25.403 INFO  - reading system configuration metadata from existing configuration file C:\Users\colin\programs\marmotta\marmotta-home\system-meta
> .properties
> 02:23:25.454 INFO  - configuration successfully saved to C:\Users\colin\programs\marmotta\marmotta-home\system-config.properties
> 02:23:25.458 INFO  - configuration successfully saved to C:\Users\colin\programs\marmotta\marmotta-home\system-meta.properties
> 02:23:25.463 INFO  - Apache Marmotta Logging Service starting up ...
> 02:23:25.599 INFO  - - configured logging modules: Caching, CDI/Weld, Configuration, KiWi Backend, KiWi Reasoner, LDCache, LDClient, LDP, LDPath, Link
> ed Data, RestEasy, Security, Sesame, SPARQL, System, User
> 02:23:25.602 INFO  - - configured logging appenders: Syslog (LOCAL0), Marmotta Main Log, Marmotta Security Log, Marmotta Debug Log, Marmotta Console
> 02:23:25.605 WARN  - LOGGING: Switching to Apache Marmotta logging configuration; further output will be found in C:\Users\colin\programs\marmotta\mar
> motta-home\log\*.log
> 02:23:27.393 WARN  - Apache Marmotta Core Version 3.2.1 has started up successfully!
> 02:23:27.397 WARN  - You can access the system now at the URL http://Ulysse:8080/marmotta/
> Oct 04, 2014 2:23:27 AM org.apache.catalina.startup.HostConfig deployDirectory
> INFO: Deploying web application directory C:\Users\colin\programs\marmotta\apache-tomcat-7.0.39\webapps\ROOT
> Oct 04, 2014 2:23:27 AM org.apache.marmotta.splash.common.MarmottaContext <init>
> INFO: instantiated new Marmotta/Tomcat webapp context (null)...
> Oct 04, 2014 2:23:27 AM org.apache.coyote.AbstractProtocol start
> INFO: Starting ProtocolHandler ["http-bio-8080"]
> Oct 04, 2014 2:23:27 AM org.apache.coyote.AbstractProtocol start
> INFO: Starting ProtocolHandler ["ajp-bio-8009"]
> Oct 04, 2014 2:23:27 AM org.apache.catalina.startup.Catalina start
> INFO: Server startup in 10692 ms
> 02:23:32.033 WARN  - pattern (C:\Users\colin\programs\marmotta\marmotta-home/resources|http://ulysse:8080/marmotta/resource/|urn:).* is not a valid re
> gular expression; disabling reader/writer filesystem (message was Illegal/unsupported escape sequence near index 4
> (C:\Users\colin\programs\marmotta\marmotta-home/resources|http://ulysse:8080/marmotta/resource/|urn:).*
>     ^)
> 02:23:42.117 WARN  - Failed executing POST /storage-kiwi/ping
> org.jboss.resteasy.core.NoMessageBodyWriterFoundFailure: Could not find MessageBodyWriter for response object of type: org.apache.marmotta.platform.co
> re.jaxrs.exceptionmappers.ErrorResponse of media type: application/octet-stream
>         at org.jboss.resteasy.core.ServerResponseWriter.writeNomapResponse(ServerResponseWriter.java:67) ~[resteasy-jaxrs-3.0.6.Final.jar:na]
>         at org.jboss.resteasy.core.SynchronousDispatcher.writeResponse(SynchronousDispatcher.java:427) [resteasy-jaxrs-3.0.6.Final.jar:na]
>         at org.jboss.resteasy.core.SynchronousDispatcher.invoke(SynchronousDispatcher.java:376) [resteasy-jaxrs-3.0.6.Final.jar:na]
>         at org.jboss.resteasy.core.SynchronousDispatcher.invokePropagateNotFound(SynchronousDispatcher.java:217) [resteasy-jaxrs-3.0.6.Final.jar:na]
>         at org.jboss.resteasy.plugins.server.servlet.ServletContainerDispatcher.service(ServletContainerDispatcher.java:224) [resteasy-jaxrs-3.0.6.Fin
> al.jar:na]
>         at org.jboss.resteasy.plugins.server.servlet.FilterDispatcher.doFilter(FilterDispatcher.java:62) [resteasy-jaxrs-3.0.6.Final.jar:na]
>         at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243) [catalina.jar:7.0.39]
>         at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210) [catalina.jar:7.0.39]
>         at org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter$LMFFilterChain.doFilter(MarmottaResourceFilter.java:186) [marmotta-core-3.
> 2.1.jar:3.2.1]
>         at org.apache.marmotta.platform.core.filters.ModuleResourceFilter.doFilter(ModuleResourceFilter.java:163) [marmotta-core-3.2.1.jar:3.2.1]
>         at org.apache.marmotta.platform.core.filters.ModuleResourceFilter$Proxy$_$$_WeldClientProxy.doFilter(Unknown Source) [marmotta-core-3.2.1.jar:
> 3.2.1]
>         at org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter$LMFFilterChain.doFilter(MarmottaResourceFilter.java:181) [marmotta-core-3.
> 2.1.jar:3.2.1]
>         at org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter$LMFFilterChain.doFilter(MarmottaResourceFilter.java:183) [marmotta-core-3.
> 2.1.jar:3.2.1]
>         at org.apache.marmotta.platform.core.filters.MarmottaServerNameFilter.doFilter(MarmottaServerNameFilter.java:104) [marmotta-core-3.2.1.jar:3.2
> .1]
>         at org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter$LMFFilterChain.doFilter(MarmottaResourceFilter.java:181) [marmotta-core-3.
> 2.1.jar:3.2.1]
>         at org.apache.marmotta.platform.core.filters.TemplatingFilter.doFilter(TemplatingFilter.java:176) [marmotta-core-3.2.1.jar:3.2.1]
>         at org.apache.marmotta.platform.core.filters.TemplatingFilter$Proxy$_$$_WeldClientProxy.doFilter(Unknown Source) [marmotta-core-3.2.1.jar:3.2.
> 1]
>         at org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter$LMFFilterChain.doFilter(MarmottaResourceFilter.java:181) [marmotta-core-3.
> 2.1.jar:3.2.1]
>         at org.apache.marmotta.platform.security.filters.MarmottaAccessControlFilter.doFilter(MarmottaAccessControlFilter.java:142) [marmotta-security
> -3.2.1.jar:3.2.1]
>         at org.apache.marmotta.platform.security.filters.MarmottaAccessControlFilter$Proxy$_$$_WeldClientProxy.doFilter(Unknown Source) [marmotta-secu
> rity-3.2.1.jar:3.2.1]
>         at org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter$LMFFilterChain.doFilter(MarmottaResourceFilter.java:181) [marmotta-core-3.
> 2.1.jar:3.2.1]
>         at org.apache.marmotta.platform.user.filters.MarmottaAuthenticationFilter.doFilter(MarmottaAuthenticationFilter.java:163) [marmotta-user-3.2.1
> .jar:3.2.1]
>         at org.apache.marmotta.platform.user.filters.MarmottaAuthenticationFilter$Proxy$_$$_WeldClientProxy.doFilter(Unknown Source) [marmotta-user-3.
> 2.1.jar:3.2.1]
>         at org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter$LMFFilterChain.doFilter(MarmottaResourceFilter.java:181) [marmotta-core-3.
> 2.1.jar:3.2.1]
>         at org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter.doFilter(MarmottaResourceFilter.java:132) [marmotta-core-3.2.1.jar:3.2.1]
>         at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243) [catalina.jar:7.0.39]
>         at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210) [catalina.jar:7.0.39]
>         at org.apache.marmotta.platform.core.servlet.MarmottaPreStartupFilter.doFilter(MarmottaPreStartupFilter.java:106) [marmotta-core-3.2.1.jar:3.2
> .1]
>         at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243) [catalina.jar:7.0.39]
>         at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210) [catalina.jar:7.0.39]
>         at com.thetransactioncompany.cors.CORSFilter.doFilter(CORSFilter.java:169) [cors-filter-1.9.jar:1.9]
>         at com.thetransactioncompany.cors.CORSFilter.doFilter(CORSFilter.java:232) [cors-filter-1.9.jar:1.9]
>         at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243) [catalina.jar:7.0.39]
>         at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210) [catalina.jar:7.0.39]
>         at org.apache.marmotta.platform.core.servlet.MarmottaOptionsFilter.doFilter(MarmottaOptionsFilter.java:83) [marmotta-core-3.2.1.jar:3.2.1]
>         at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243) [catalina.jar:7.0.39]
>         at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210) [catalina.jar:7.0.39]
>         at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:222) [catalina.jar:7.0.39]
>         at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:123) [catalina.jar:7.0.39]
>         at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:472) [catalina.jar:7.0.39]
>         at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:171) [catalina.jar:7.0.39]
>         at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:99) [catalina.jar:7.0.39]
>         at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:947) [catalina.jar:7.0.39]
>         at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:118) [catalina.jar:7.0.39]
>         at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:408) [catalina.jar:7.0.39]
>         at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1009) [tomcat-coyote.jar:7.0.39]
>         at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:589) [tomcat-coyote.jar:7.0.39]
>         at org.apache.tomcat.util.net.JIoEndpoint$SocketProcessor.run(JIoEndpoint.java:312) [tomcat-coyote.jar:7.0.39]
>         at java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source) [na:1.7.0_67]
>         at java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source) [na:1.7.0_67]
>         at java.lang.Thread.run(Unknown Source) [na:1.7.0_67]



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