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Posted to jira@arrow.apache.org by "Stanislaw (Jira)" <ji...@apache.org> on 2022/09/15 18:36:00 UTC
[jira] [Updated] (ARROW-17748) not able to install arrow on alpine 3.16
[ https://issues.apache.org/jira/browse/ARROW-17748?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Stanislaw updated ARROW-17748:
------------------------------
Summary: not able to install arrow on alpine 3.16 (was: not possible to install arrow on alpine 3.16)
> not able to install arrow on alpine 3.16
> ----------------------------------------
>
> Key: ARROW-17748
> URL: https://issues.apache.org/jira/browse/ARROW-17748
> Project: Apache Arrow
> Issue Type: Bug
> Components: Integration
> Affects Versions: 9.0.0
> Reporter: Stanislaw
> Priority: Major
>
> Hi we're facing an issue with integration on the latest version on alpine, it seems that the root cause is placed on arrow package.
> We've tested a few of version and we're able to install only arrow in version 3.0.0
> It's seems that this package is not compatible
>
> this is a dockerfile which we're using for
>
> {code:java}
> FROM python:3.8-alpine
> RUN apk update \
> && apk upgrade \
> && apk add --no-cache build-base \
> autoconf \
> bash \
> bison \
> boost-dev \
> cmake \
> flex \
> libressl-dev \
> zlib-dev
> RUN pip install --no-cache-dir six pytest numpy cython
> RUN pip install --no-cache-dir pandas
> ARG ARROW_VERSION=9.0.0
> ARG ARROW_BUILD_TYPE=release
> ENV ARROW_HOME=/usr/local \
> PARQUET_HOME=/usr/local
> #Download and build apache-arrow
> RUN mkdir /arrow \
> && wget -q https://github.com/apache/arrow/archive/apache-arrow-${ARROW_VERSION}.tar.gz -O /tmp/apache-arrow.tar.gz \
> && tar -xvf /tmp/apache-arrow.tar.gz -C /arrow --strip-components 1 \
> && mkdir -p /arrow/cpp/build \
> && cd /arrow/cpp/build \
> && cmake -DCMAKE_BUILD_TYPE=$ARROW_BUILD_TYPE \
> -DOPENSSL_ROOT_DIR=/usr/local/ssl \
> -DCMAKE_INSTALL_LIBDIR=lib \
> -DCMAKE_INSTALL_PREFIX=$ARROW_HOME \
> -DARROW_WITH_BZ2=ON \
> -DARROW_WITH_ZLIB=ON \
> -DARROW_WITH_ZSTD=ON \
> -DARROW_WITH_LZ4=ON \
> -DARROW_WITH_SNAPPY=ON \
> -DARROW_PARQUET=ON \
> -DARROW_PYTHON=ON \
> -DARROW_PLASMA=ON \
> -DARROW_BUILD_TESTS=OFF \
> .. \
> && make -j$(nproc) \
> && make install \
> && cd /arrow/python \
> && python setup.py build_ext --build-type=$ARROW_BUILD_TYPE --with-parquet \
> && python setup.py install \
> && rm -rf /arrow /tmp/apache-arrow.tar.gz {code}
> link to describe a bug
> [https://gist.github.com/bskaggs/fc3c8d0d553be54e2645616236fdc8c6]
>
> and the final output of error. Please double check and release the fix.
>
> {code:java}
> #12 164.8 -- stderr output is:
> #12 164.8 In file included from /arrow/cpp/build/thrift_ep-prefix/src/thrift_ep/lib/cpp/src/thrift/transport/TSocket.cpp:37:
> #12 164.8 /usr/include/sys/poll.h:1:2: warning: #warning redirecting incorrect #include <sys/poll.h> to <poll.h> [-Wcpp]
> #12 164.8 1 | #warning redirecting incorrect #include <sys/poll.h> to <poll.h>
> #12 164.8 | ^~~~~~~
> #12 164.8 In file included from /arrow/cpp/build/thrift_ep-prefix/src/thrift_ep/lib/cpp/src/thrift/transport/TServerSocket.cpp:33:
> #12 164.8 /usr/include/sys/poll.h:1:2: warning: #warning redirecting incorrect #include <sys/poll.h> to <poll.h> [-Wcpp]
> #12 164.8 1 | #warning redirecting incorrect #include <sys/poll.h> to <poll.h>
> #12 164.8 | ^~~~~~~
> #12 164.8 In file included from /arrow/cpp/build/thrift_ep-prefix/src/thrift_ep/lib/cpp/src/thrift/transport/TSSLSocket.cpp:34:
> #12 164.8 /usr/include/sys/poll.h:1:2: warning: #warning redirecting incorrect #include <sys/poll.h> to <poll.h> [-Wcpp]
> #12 164.8 1 | #warning redirecting incorrect #include <sys/poll.h> to <poll.h>
> #12 164.8 | ^~~~~~~
> #12 164.8 /arrow/cpp/build/thrift_ep-prefix/src/thrift_ep/lib/cpp/src/thrift/transport/TSSLSocket.cpp: In function 'void apache::thrift::transport::cleanupOpenSSL()':
> #12 164.8 /arrow/cpp/build/thrift_ep-prefix/src/thrift_ep/lib/cpp/src/thrift/transport/TSSLSocket.cpp:157:3: error: 'OPENSSL_thread_stop' was not declared in this scope; did you mean 'OPENSSL_realloc'?
> #12 164.8 157 | OPENSSL_thread_stop();
> #12 164.8 | ^~~~~~~~~~~~~~~~~~~
> #12 164.8 | OPENSSL_realloc
> #12 164.8 /arrow/cpp/build/thrift_ep-prefix/src/thrift_ep/lib/cpp/src/thrift/transport/TSSLSocket.cpp: In member function 'virtual void apache::thrift::transport::TSSLSocket::close()':
> #12 164.8 /arrow/cpp/build/thrift_ep-prefix/src/thrift_ep/lib/cpp/src/thrift/transport/TSSLSocket.cpp:395:5: error: 'OPENSSL_thread_stop' was not declared in this scope; did you mean 'OPENSSL_realloc'?
> #12 164.8 395 | OPENSSL_thread_stop();
> #12 164.8 | ^~~~~~~~~~~~~~~~~~~
> #12 164.8 | OPENSSL_realloc
> #12 164.8 make[5]: *** [lib/cpp/CMakeFiles/thrift.dir/build.make:566: lib/cpp/CMakeFiles/thrift.dir/src/thrift/transport/TSSLSocket.cpp.o] Error 1
> #12 164.8 make[5]: *** Waiting for unfinished jobs....
> #12 164.8 make[4]: *** [CMakeFiles/Makefile2:125: lib/cpp/CMakeFiles/thrift.dir/all] Error 2
> #12 164.8 make[3]: *** [Makefile:156: all] Error 2
> #12 164.8
> #12 164.8 CMake Error at /arrow/cpp/build/thrift_ep-prefix/src/thrift_ep-stamp/thrift_ep-build-RELEASE.cmake:47 (message):
> #12 164.8 Stopping after outputting logs.
> #12 164.8
> #12 164.8
> #12 164.8 make[2]: *** [CMakeFiles/thrift_ep.dir/build.make:86: thrift_ep-prefix/src/thrift_ep-stamp/thrift_ep-build] Error 1
> #12 164.8 make[1]: *** [CMakeFiles/Makefile2:940: CMakeFiles/thrift_ep.dir/all] Error 2
> #12 164.8 make[1]: *** Waiting for unfinished jobs....
> #12 187.8 -- re2_ep build command succeeded. See also /arrow/cpp/build/re2_ep-prefix/src/re2_ep-stamp/re2_ep-build-*.log
> #12 187.8 [ 20%] Performing install step for 're2_ep'
> #12 188.7 -- re2_ep install command succeeded. See also /arrow/cpp/build/re2_ep-prefix/src/re2_ep-stamp/re2_ep-install-*.log
> #12 188.7 [ 20%] Completed 're2_ep'
> #12 188.7 [ 20%] Built target re2_ep
> #12 212.4 -- jemalloc_ep build command succeeded. See also /arrow/cpp/build/jemalloc_ep-prefix/src/jemalloc_ep-stamp/jemalloc_ep-build-*.log
> #12 212.4 [ 20%] Performing install step for 'jemalloc_ep'
> #12 212.5 -- jemalloc_ep install command succeeded. See also /arrow/cpp/build/jemalloc_ep-prefix/src/jemalloc_ep-stamp/jemalloc_ep-install-*.log
> #12 212.5 [ 20%] Completed 'jemalloc_ep'
> #12 212.5 [ 20%] Built target jemalloc_ep
> #12 212.5 make: *** [Makefile:146: all] Error 2
> ------
> executor failed running [/bin/sh -c mkdir /arrow && wget -q https://github.com/apache/arrow/archive/apache-arrow-${ARROW_VERSION}.tar.gz -O /tmp/apache-arrow.tar.gz && tar -xvf /tmp/apache-arrow.tar.gz -C /arrow --strip-components 1 && mkdir -p /arrow/cpp/build && cd /arrow/cpp/build && cmake -DCMAKE_BUILD_TYPE=$ARROW_BUILD_TYPE -DOPENSSL_ROOT_DIR=/usr/local/ssl -DCMAKE_INSTALL_LIBDIR=lib -DCMAKE_INSTALL_PREFIX=$ARROW_HOME -DARROW_WITH_BZ2=ON -DARROW_WITH_ZLIB=ON -DARROW_WITH_ZSTD=ON -DARROW_WITH_LZ4=ON -DARROW_WITH_SNAPPY=ON -DARROW_PARQUET=ON -DARROW_PYTHON=ON -DARROW_PLASMA=ON -DARROW_BUILD_TESTS=OFF .. && make -j$(nproc) && make install && cd /arrow/python && python setup.py build_ext --build-type=$ARROW_BUILD_TYPE --with-parquet && python setup.py install && rm -rf /arrow /tmp/apache-arrow.tar.gz]: exit code: 2 {code}
>
>
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