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Posted to dev@ctakes.apache.org by Bandeep Singh <bs...@phemi.com> on 2016/09/02 22:52:43 UTC

Re: ctakesnorxx 2015 does'nt have SNOWMED CT dictionary

>
> Hi All,
>
> I have been trying to run cTakes with cTakesnorxx2015 dictionary and
> can''t get SNOWMED CT codes loaded.
> I get the below error when i run the program:
> 02 Sep 2016 15:43:49  INFO JdbcConnectionFactory -  Database connected
> 02 Sep 2016 15:43:49  INFO JdbcRareWordDictionary - Connected to cui and
> term table CUI_TERMS
> 02 Sep 2016 15:43:49  INFO JdbcConceptFactory - Connected to concept table
> ICD9CM with class TEXT
> 02 Sep 2016 15:43:49  INFO JdbcConceptFactory - Connected to concept table
> TUI with class TUI
> 02 Sep 2016 15:43:49  INFO JdbcConceptFactory - Connected to concept table
> RXNORM with class TEXT
> 02 Sep 2016 15:43:49  INFO JdbcConceptFactory - Connected to concept table
> PREFTERM with class PREFTERM
> 02 Sep 2016 15:43:49  INFO JdbcConceptFactory - Connected to concept table
> ICD10PCS with class TEXT
> 02 Sep 2016 15:43:49 ERROR JdbcConceptFactory - Table SNOMEDCTTABLE and/or
> SNOMEDCT not found in Database
>
> Any pointers to resolve this problem would be really helpful.
>
> Is there any latest cTakes UMLS dictionary I can use to annotate the text
> using SNOMED CT codes.
>
> Thanks,
> Bandeep
>