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Posted to commits@airavata.apache.org by ya...@apache.org on 2026/03/26 03:35:18 UTC
(airavata) 01/01: feat(db): unify all databases into single airavata DB with schema migrations
This is an automated email from the ASF dual-hosted git repository.
yasith pushed a commit to branch feat/svclayer-db
in repository https://gitbox.apache.org/repos/asf/airavata.git
commit 109e011752cee7611d79407f56c9f03ae7f053e2
Author: yasithdev <ya...@icloud.com>
AuthorDate: Wed Mar 25 22:33:25 2026 -0500
feat(db): unify all databases into single airavata DB with schema migrations
- Consolidate 7+ separate databases (app_catalog, experiment_catalog,
replica_catalog, workflow_catalog, sharing_catalog, credential_store,
profile_service) into a single 'airavata' database
- Generate V1 baseline schema (146 tables) from JPA entity annotations
across all modules: experiment catalog, application catalog, airavata
workflow catalog, replica catalog, sharing registry, profile service,
research service, and agent service
- Rename duplicate table names for single-DB coexistence:
profile GATEWAY -> TENANT_GATEWAY, research PROJECT -> RESEARCH_PROJECT
- Remove legacy workflowcatalog tables (dead code, not in any persistence unit)
- Remove legacy DatabaseCreator and make DBInitializer a no-op
(schema creation now handled by migration SQL)
- Restore persistence.xml (needed by OpenJPA enhancer) and dozer_mapping.xml
- Standardize all hostnames to airavata.localhost (RFC 6761 .localhost TLD)
- Simplify compose.yml: single file with all infrastructure services
(MariaDB, RabbitMQ, ZooKeeper, Kafka, Keycloak)
- Remove .devcontainer directory (Dockerfile kept, compose consolidated)
- Remove portals, proxy, gateway-storage configs
- DB init uses V1 flyway migration SQL directly via docker-entrypoint-initdb.d
- Fix validation queries (SELECT 1 instead of SELECT 1 from CONFIGURATION)
- Fix RabbitMQ credentials to match compose (airavata:airavata)
Verified: all 9 services start and pass schema validation against
the V1 baseline with zero errors.
Co-Authored-By: Claude Opus 4.6 (1M context) <no...@anthropic.com>
---
.devcontainer/Dockerfile | 70 -
.../database_scripts/init/00-accounts.sql | 3 -
.../database_scripts/init/01-databases.sql | 3617 --------------------
.../init/02-sharing-registry-migrations.sql | 4 -
.../init/03-appcatalog-migrations.sql | 22 -
.../init/04-expcatalog-migrations.sql | 54 -
.../init/05-replica-catalog-migrations.sql | 27 -
.../init/06-cloud-execution-support-migration.sql | 84 -
.../init/07-cleanup-strategy-migration.sql | 4 -
.devcontainer/devcontainer.json | 27 -
.devcontainer/docker-compose-alt.yml | 279 --
.devcontainer/docker-compose.yml | 263 --
.devcontainer/gateway-storage/Dockerfile | 22 -
.devcontainer/gateway-storage/authorized_keys | 1 -
.devcontainer/portals/Dockerfile | 33 -
.devcontainer/portals/pga-default.conf | 10 -
.devcontainer/portals/pga_config.php | 324 --
.devcontainer/proxy/http.conf | 104 -
.devcontainer/proxy/nginx.conf | 15 -
.devcontainer/proxy/stream.conf | 18 -
.../src/main/resources/conf/db/README.md | 40 +
.../src/main/resources/conf/db/create-database.sql | 36 +-
.../db/migration/airavata/V1__Baseline_schema.sql | 1720 ++++++++++
.../airavata/common/utils/DBInitializer.java | 43 +-
.../airavata/common/utils/DatabaseCreator.java | 381 ---
.../airavata/common/utils/DatabaseTestCases.java | 123 -
.../core/utils/migration/MappingToolRunner.java | 65 -
.../utils/migration/MigrationSchemaGenerator.java | 125 -
.../commons/tenant/entities/GatewayEntity.java | 2 +-
.../src/main/resources/airavata-server.properties | 56 +-
.../airavataworkflowcatalog-derby.sql | 212 --
.../database_scripts/appcatalog-mysql.sql | 763 -----
.../resources/database_scripts/credstore-mysql.sql | 27 -
.../database_scripts/expcatalog-mysql.sql | 446 ---
.../database_scripts/replicacatalog-mysql.sql | 77 -
.../database_scripts/sharing-registry-mysql.sql | 149 -
.../user-profile-catalog-mysql.sql | 163 -
.../database_scripts/workflowcatalog-mysql.sql | 128 -
.../derby/airavata-server.properties | 72 -
.../mysql/airavata-server.properties | 63 -
.../migrations-util/mysql/docker-compose.yml | 15 -
.../create_databases.sql | 27 -
.../src/test/resources/airavata-server.properties | 13 +-
airavata-api/src/test/resources/authenticators.xml | 2 +-
.../src/test/resources/jdbc-authenticator.xml | 2 +-
.../src/test/resources/ldap-authenticator.xml | 2 +-
.../src/test/resources/session-authenticator.xml | 2 +-
compose.yml | 86 +
{.devcontainer => conf}/keycloak/keycloak.conf | 0
.../keycloak/realm-default.json | 12 +-
dev-tools/ansible/database.yml | 34 -
.../inventories/dev/group_vars/all/vars.yml | 37 +-
.../scigap/develop/group_vars/all/vars.yml | 10 +-
.../scigap/production/group_vars/all/vars.yml | 12 +-
.../production/host_vars/simvascular/vars.yml | 2 +-
.../scigap/production/host_vars/smiles/vars.yml | 4 +-
.../scigap/staging/group_vars/all/vars.yml | 2 +-
.../scigap/testing/group_vars/all/vars.yml | 2 +-
.../inventories/staging/group_vars/all/vars.yml | 37 +-
.../inventories/standalone/group_vars/all/vars.yml | 17 +-
.../inventories/template/group_vars/all/vars.yml | 17 +-
.../roles/airavata_services/defaults/main.yml | 28 +-
.../airavata_services/tasks/generate_keystore.yml | 2 +-
.../airavata_services/tasks/start_services.yml | 2 +-
dev-tools/ansible/roles/api-orch/defaults/main.yml | 6 +-
dev-tools/ansible/roles/database/defaults/main.yml | 21 -
.../roles/database/files/MariaDB_yum_CentOS_7.repo | 27 -
.../ansible/roles/database/files/mysql-tmp.te | 29 -
dev-tools/ansible/roles/database/handlers/main.yml | 34 -
.../ansible/roles/database/tasks/keycloak.yml | 68 -
dev-tools/ansible/roles/database/tasks/main.yml | 388 ---
.../roles/database/tasks/secure_install.yml | 214 --
.../ansible/roles/database/templates/my.cnf.j2 | 4 -
dev-tools/ansible/roles/database/vars/main.yml | 45 -
dev-tools/ansible/roles/django/tasks/database.yml | 51 -
dev-tools/ansible/roles/kafka/defaults/main.yml | 2 +-
dev-tools/ansible/roles/keycloak/defaults/main.yml | 8 +-
.../roles/keycloak/templates/realm-default.json.j2 | 6 +-
.../ansible/roles/tusd/templates/tus-vhost.conf.j2 | 4 +-
dev-tools/ansible/roles/zabbix/defaults/main.yml | 2 +-
.../deployment-scripts/airavata-server.properties | 65 +-
dev-tools/deployment-scripts/docker-startup.sh | 2 +-
dev-tools/simstream/example/settings.json | 2 +-
docker-compose.yml | 113 -
.../resources/profile-client-sample.properties | 2 +-
keystores/generate_keystore.sh | 4 +-
.../src/main/resources/application.yml | 14 +-
.../src/main/resources/application.properties | 4 +-
modules/registry-db-migrator/README.md | 9 -
modules/registry-db-migrator/pom.xml | 58 -
.../apache/airavata/registry/tool/DBMigrator.java | 373 --
.../src/main/resources/db-migrate.sh | 34 -
.../resources/db-scripts/0.6/migrate_derby.sql | 35 -
.../resources/db-scripts/0.6/migrate_mysql.sql | 32 -
.../resources/db-scripts/0.7/migrate_derby.sql | 40 -
.../resources/db-scripts/0.8/migrate_derby.sql | 72 -
.../resources/db-scripts/0.8/migrate_mysql.sql | 72 -
.../DeltaScripts/appCatalog_schema_delta.sql | 106 -
.../DeltaScripts/credentialStore_schema_delta.sql | 29 -
.../DeltaScripts/expCatalog_schema_delta.sql | 46 -
.../DeltaScripts/profile_service_schema_delta.sql | 21 -
.../DeltaScripts/replicaCatalog_schema_delta.sql | 24 -
.../DeltaScripts/sharingCatalog_schema_delta.sql | 31 -
.../DeltaScripts/workFlow_schema_delta.sql | 23 -
...licaCatalog_lowercase_user_data_dir_example.sql | 38 -
.../credentialStore_keycloak_migration.sql | 22 -
.../expCatalog_keycloak_migration.sql | 31 -
.../profileService_keycloak_migration.sql | 28 -
.../sharingCatalog_keycloak_migration.sql | 28 -
.../0.16-0.17/migration-notes.md | 17 -
.../DeltaScripts/expCatalog_schema_delta.sql | 34 -
.../DeltaScripts/profile_service_schema_delta.sql | 53 -
.../DeltaScripts/sharingCatalog_schema_delta.sql | 28 -
.../DeltaScripts/appCatalog_schema_delta.sql | 513 ---
.../DeltaScripts/credential_store_schema_delta.sql | 32 -
.../experimentCatalog_schema_delta.sql | 133 -
.../DeltaScripts/profile_service_schema_delta.sql | 68 -
.../DeltaScripts/replicaCatalog_schema_delta.sql | 46 -
.../DeltaScripts/sharingCatalog_schema_delta.sql | 48 -
.../DeltaScripts/appCatalog_schema_delta.sql | 29 -
.../DeltaScripts/credential_store_schema_delta.sql | 21 -
.../experimentCatalog_schema_delta.sql | 35 -
.../DeltaScripts/profile_service_schema_delta.sql | 21 -
.../DeltaScripts/replicaCatalog_schema_delta.sql | 21 -
.../DeltaScripts/sharingCatalog_schema_delta.sql | 21 -
.../next/DeltaScripts/appCatalog_schema_delta.sql | 21 -
.../DeltaScripts/credential_store_schema_delta.sql | 21 -
.../experimentCatalog_schema_delta.sql | 38 -
.../DeltaScripts/profile_service_schema_delta.sql | 21 -
.../DeltaScripts/replicaCatalog_schema_delta.sql | 46 -
.../DeltaScripts/sharingCatalog_schema_delta.sql | 21 -
.../src/main/compose/dbinit/01-init-db.sql | 7 +-
.../research/service/model/entity/Project.java | 2 +-
.../src/main/resources/application.yml | 14 +-
modules/research-framework/simexr_mod/setup.sh | 6 +-
.../src/main/resources/application.properties | 2 +-
pom.xml | 2 -
137 files changed, 2067 insertions(+), 11560 deletions(-)
diff --git a/.devcontainer/Dockerfile b/.devcontainer/Dockerfile
deleted file mode 100644
index dd55441296..0000000000
--- a/.devcontainer/Dockerfile
+++ /dev/null
@@ -1,70 +0,0 @@
-FROM ubuntu:22.04 as deps
-
-ARG TARGETARCH
-
-# Avoid interactive prompts during package installation
-ENV DEBIAN_FRONTEND=noninteractive
-
-# Install system dependencies, python 3.10, and java 17
-RUN apt-get update && \
- apt-get install -y \
- curl wget git build-essential pkg-config libssl-dev libffi-dev software-properties-common \
- python3.10 python3.10-dev \
- openjdk-17-jdk \
- && rm -rf /var/lib/apt/lists/*
-
-# Install maven 3.9.10
-RUN wget https://dlcdn.apache.org/maven/maven-3/3.9.10/binaries/apache-maven-3.9.10-bin.tar.gz \
- && tar -xzf apache-maven-3.9.10-bin.tar.gz \
- && mv apache-maven-3.9.10 /opt/maven \
- && rm apache-maven-3.9.10-bin.tar.gz
-
-# Install go 1.23.0
-RUN wget https://go.dev/dl/go1.23.0.linux-amd64.tar.gz \
- && tar -C /usr/local -xzf go1.23.0.linux-amd64.tar.gz \
- && rm go1.23.0.linux-amd64.tar.gz
-
-# Install Thrift 0.22
-RUN wget https://dlcdn.apache.org/thrift/0.22.0/thrift-0.22.0.tar.gz \
- && tar -xzf thrift-0.22.0.tar.gz \
- && cd thrift-0.22.0 \
- && ./configure --without-rs --enable-libs=no --enable-tests=no \
- && make -j$(nproc) \
- && make install \
- && cd .. \
- && rm -rf thrift-0.22.0 thrift-0.22.0.tar.gz
-
-# Create non-root user (developer)
-RUN useradd -m -s /bin/bash developer
-USER developer
-WORKDIR /home/developer
-
-# Set environment variables
-ENV JAVA_HOME=/usr/lib/jvm/java-17-openjdk-$TARGETARCH
-ENV MAVEN_HOME=/opt/maven
-ENV GOROOT=/usr/local/go
-ENV GOPATH=/home/developer/go
-ENV PATH=$PATH:$JAVA_HOME/bin:$MAVEN_HOME/bin:$GOROOT/bin:$GOPATH/bin
-
-EXPOSE 7878 8000 17000 8050 8930 8960 8962 8970 18800 19900 18889 19908
-
-FROM deps AS compiler
-
-COPY --chown=developer:developer .. /home/developer/workspace
-WORKDIR /home/developer/workspace
-RUN mvn clean install -DskipTests
-
-
-FROM eclipse-temurin:17-jdk AS runner
-WORKDIR /app
-
-COPY --from=compiler /home/developer/workspace/distribution/*.tar.gz ./
-
-COPY ../dev-tools/deployment-scripts/*.sh ./
-COPY ../vault ./vault
-
-RUN chmod +x ./distribution_update.sh ./services_up.sh
-
-EXPOSE 7878 8000 17000 8050 8930 8960 8962 8970 18800 19900 18889 19908
-
-CMD ["sh", "-c", "./distribution_update.sh && ./services_up.sh && sleep infinity"]
diff --git a/.devcontainer/database_scripts/init/00-accounts.sql b/.devcontainer/database_scripts/init/00-accounts.sql
deleted file mode 100644
index 0d57e5e080..0000000000
--- a/.devcontainer/database_scripts/init/00-accounts.sql
+++ /dev/null
@@ -1,3 +0,0 @@
-CREATE USER IF NOT EXISTS 'airavata'@'%' IDENTIFIED BY '123456';
-GRANT ALL PRIVILEGES ON *.* TO 'airavata'@'%';
-FLUSH PRIVILEGES;
\ No newline at end of file
diff --git a/.devcontainer/database_scripts/init/01-databases.sql b/.devcontainer/database_scripts/init/01-databases.sql
deleted file mode 100644
index 0f253c8430..0000000000
--- a/.devcontainer/database_scripts/init/01-databases.sql
+++ /dev/null
@@ -1,3617 +0,0 @@
--- MySQL dump 10.13 Distrib 5.7.21, for Linux (x86_64)
---
--- Host: localhost Database: app_catalog
--- ------------------------------------------------------
--- Server version 5.7.21
-
-/*!40101 SET @OLD_CHARACTER_SET_CLIENT=@@CHARACTER_SET_CLIENT */;
-/*!40101 SET @OLD_CHARACTER_SET_RESULTS=@@CHARACTER_SET_RESULTS */;
-/*!40101 SET @OLD_COLLATION_CONNECTION=@@COLLATION_CONNECTION */;
-/*!40101 SET NAMES utf8 */;
-/*!40103 SET @OLD_TIME_ZONE=@@TIME_ZONE */;
-/*!40103 SET TIME_ZONE='+00:00' */;
-/*!40014 SET @OLD_UNIQUE_CHECKS=@@UNIQUE_CHECKS, UNIQUE_CHECKS=0 */;
-/*!40014 SET @OLD_FOREIGN_KEY_CHECKS=@@FOREIGN_KEY_CHECKS, FOREIGN_KEY_CHECKS=0 */;
-/*!40101 SET @OLD_SQL_MODE=@@SQL_MODE, SQL_MODE='NO_AUTO_VALUE_ON_ZERO' */;
-/*!40111 SET @OLD_SQL_NOTES=@@SQL_NOTES, SQL_NOTES=0 */;
-
---
--- Current Database: `app_catalog`
---
-
-CREATE DATABASE /*!32312 IF NOT EXISTS*/ `app_catalog` /*!40100 DEFAULT CHARACTER SET utf8mb4 COLLATE utf8mb4_unicode_ci */;
-
-USE `app_catalog`;
-
---
--- Table structure for table `APPLICATION_DEPLOYMENT`
---
-
-DROP TABLE IF EXISTS `APPLICATION_DEPLOYMENT`;
-/*!40101 SET @saved_cs_client = @@character_set_client */;
-/*!40101 SET character_set_client = utf8 */;
-CREATE TABLE `APPLICATION_DEPLOYMENT` (
- `DEPLOYMENT_ID` varchar(255) NOT NULL,
- `APP_MODULE_ID` varchar(255) NOT NULL,
- `COMPUTE_HOSTID` varchar(255) NOT NULL,
- `EXECUTABLE_PATH` varchar(255) DEFAULT NULL,
- `PARALLELISM` varchar(255) DEFAULT NULL,
- `APPLICATION_DESC` varchar(255) DEFAULT NULL,
- `ENV_MODULE_LOAD_CMD` varchar(255) DEFAULT NULL,
- `CREATION_TIME` timestamp NOT NULL DEFAULT CURRENT_TIMESTAMP,
- `UPDATE_TIME` timestamp NOT NULL DEFAULT '0000-00-00 00:00:00',
- `GATEWAY_ID` varchar(255) NOT NULL,
- `DEFAULT_QUEUE_NAME` varchar(255) DEFAULT NULL,
- `DEFAULT_NODE_COUNT` int(11) DEFAULT NULL,
- `DEFAULT_CPU_COUNT` int(11) DEFAULT NULL,
- `DEFAULT_WALLTIME` int(11) DEFAULT NULL,
- `EDITABLE_BY_USER` tinyint(1) DEFAULT NULL,
- PRIMARY KEY (`DEPLOYMENT_ID`),
- KEY `COMPUTE_HOSTID` (`COMPUTE_HOSTID`),
- KEY `APP_MODULE_ID` (`APP_MODULE_ID`),
- CONSTRAINT `application_deployment_ibfk_1` FOREIGN KEY (`COMPUTE_HOSTID`) REFERENCES `COMPUTE_RESOURCE` (`RESOURCE_ID`) ON DELETE CASCADE,
- CONSTRAINT `application_deployment_ibfk_2` FOREIGN KEY (`APP_MODULE_ID`) REFERENCES `APPLICATION_MODULE` (`MODULE_ID`) ON DELETE CASCADE
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
-/*!40101 SET character_set_client = @saved_cs_client */;
-
---
--- Dumping data for table `APPLICATION_DEPLOYMENT`
---
-
-LOCK TABLES `APPLICATION_DEPLOYMENT` WRITE;
-/*!40000 ALTER TABLE `APPLICATION_DEPLOYMENT` DISABLE KEYS */;
-INSERT INTO `APPLICATION_DEPLOYMENT` VALUES ('js-156-93.jetstream-cloud.org_Echo_88202f35-beef-414a-84a4-6ee9dd4f5a84','Echo_88202f35-beef-414a-84a4-6ee9dd4f5a84','js-156-93.jetstream-cloud.org_f0813875-de5b-4abb-b56f-eb9237809c61','/home/grid_user/apps/echo_wrapper.sh','SERIAL','',NULL,'2019-02-26 10:42:01','2019-02-26 10:42:01','default','cloud',1,2,0,0);
-/*!40000 ALTER TABLE `APPLICATION_DEPLOYMENT` ENABLE KEYS */;
-UNLOCK TABLES;
-
---
--- Table structure for table `APPLICATION_INPUT`
---
-
-DROP TABLE IF EXISTS `APPLICATION_INPUT`;
-/*!40101 SET @saved_cs_client = @@character_set_client */;
-/*!40101 SET character_set_client = utf8 */;
-CREATE TABLE `APPLICATION_INPUT` (
- `INTERFACE_ID` varchar(255) NOT NULL,
- `INPUT_KEY` varchar(255) NOT NULL,
- `INPUT_VALUE` varchar(255) DEFAULT NULL,
- `DATA_TYPE` varchar(255) DEFAULT NULL,
- `METADATA` varchar(4096) DEFAULT NULL,
- `APP_ARGUMENT` varchar(255) DEFAULT NULL,
- `STANDARD_INPUT` smallint(6) DEFAULT NULL,
- `USER_FRIENDLY_DESC` varchar(255) DEFAULT NULL,
- `INPUT_ORDER` int(11) DEFAULT NULL,
- `IS_REQUIRED` smallint(6) DEFAULT NULL,
- `REQUIRED_TO_COMMANDLINE` smallint(6) DEFAULT NULL,
- `DATA_STAGED` smallint(6) DEFAULT NULL,
- `IS_READ_ONLY` smallint(6) DEFAULT NULL,
- PRIMARY KEY (`INTERFACE_ID`,`INPUT_KEY`),
- CONSTRAINT `application_input_ibfk_1` FOREIGN KEY (`INTERFACE_ID`) REFERENCES `APPLICATION_INTERFACE` (`INTERFACE_ID`) ON DELETE CASCADE
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
-/*!40101 SET character_set_client = @saved_cs_client */;
-
---
--- Dumping data for table `APPLICATION_INPUT`
---
-
-LOCK TABLES `APPLICATION_INPUT` WRITE;
-/*!40000 ALTER TABLE `APPLICATION_INPUT` DISABLE KEYS */;
-INSERT INTO `APPLICATION_INPUT` VALUES ('Echo_661f23c7-eca7-49ba-987b-55f4202b60bb','Input-To-Echo','','STRING',NULL,'',0,'',0,1,1,0,0);
-/*!40000 ALTER TABLE `APPLICATION_INPUT` ENABLE KEYS */;
-UNLOCK TABLES;
-
---
--- Table structure for table `APPLICATION_INTERFACE`
---
-
-DROP TABLE IF EXISTS `APPLICATION_INTERFACE`;
-/*!40101 SET @saved_cs_client = @@character_set_client */;
-/*!40101 SET character_set_client = utf8 */;
-CREATE TABLE `APPLICATION_INTERFACE` (
- `INTERFACE_ID` varchar(255) NOT NULL,
- `APPLICATION_NAME` varchar(255) DEFAULT NULL,
- `APPLICATION_DESCRIPTION` varchar(500) DEFAULT NULL,
- `GATEWAY_ID` varchar(255) NOT NULL,
- `ARCHIVE_WORKING_DIRECTORY` smallint(6) DEFAULT NULL,
- `HAS_OPTIONAL_FILE_INPUTS` tinyint(1) DEFAULT NULL,
- `CREATION_TIME` timestamp NOT NULL DEFAULT CURRENT_TIMESTAMP,
- `UPDATE_TIME` timestamp NOT NULL DEFAULT '0000-00-00 00:00:00',
- PRIMARY KEY (`INTERFACE_ID`)
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
-/*!40101 SET character_set_client = @saved_cs_client */;
-
---
--- Dumping data for table `APPLICATION_INTERFACE`
---
-
-LOCK TABLES `APPLICATION_INTERFACE` WRITE;
-/*!40000 ALTER TABLE `APPLICATION_INTERFACE` DISABLE KEYS */;
-INSERT INTO `APPLICATION_INTERFACE` VALUES ('Echo_661f23c7-eca7-49ba-987b-55f4202b60bb','Echo','A Simple Echo Application','default',1,0,'2019-02-25 18:57:38','2019-02-25 18:57:38');
-/*!40000 ALTER TABLE `APPLICATION_INTERFACE` ENABLE KEYS */;
-UNLOCK TABLES;
-
---
--- Table structure for table `APPLICATION_MODULE`
---
-
-DROP TABLE IF EXISTS `APPLICATION_MODULE`;
-/*!40101 SET @saved_cs_client = @@character_set_client */;
-/*!40101 SET character_set_client = utf8 */;
-CREATE TABLE `APPLICATION_MODULE` (
- `MODULE_ID` varchar(255) NOT NULL,
- `MODULE_NAME` varchar(255) DEFAULT NULL,
- `MODULE_VERSION` varchar(255) DEFAULT NULL,
- `MODULE_DESC` varchar(500) DEFAULT NULL,
- `GATEWAY_ID` varchar(255) NOT NULL,
- `CREATION_TIME` timestamp NOT NULL DEFAULT CURRENT_TIMESTAMP,
- `UPDATE_TIME` timestamp NOT NULL DEFAULT '0000-00-00 00:00:00',
- PRIMARY KEY (`MODULE_ID`)
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
-/*!40101 SET character_set_client = @saved_cs_client */;
-
---
--- Dumping data for table `APPLICATION_MODULE`
---
-
-LOCK TABLES `APPLICATION_MODULE` WRITE;
-/*!40000 ALTER TABLE `APPLICATION_MODULE` DISABLE KEYS */;
-INSERT INTO `APPLICATION_MODULE` VALUES ('Echo_88202f35-beef-414a-84a4-6ee9dd4f5a84','Echo','','','default','2019-02-25 18:53:41','2019-02-25 18:53:41');
-/*!40000 ALTER TABLE `APPLICATION_MODULE` ENABLE KEYS */;
-UNLOCK TABLES;
-
---
--- Table structure for table `APPLICATION_OUTPUT`
---
-
-DROP TABLE IF EXISTS `APPLICATION_OUTPUT`;
-/*!40101 SET @saved_cs_client = @@character_set_client */;
-/*!40101 SET character_set_client = utf8 */;
-CREATE TABLE `APPLICATION_OUTPUT` (
- `INTERFACE_ID` varchar(255) NOT NULL,
- `OUTPUT_KEY` varchar(255) NOT NULL,
- `OUTPUT_VALUE` varchar(255) DEFAULT NULL,
- `DATA_TYPE` varchar(255) DEFAULT NULL,
- `IS_REQUIRED` smallint(6) DEFAULT NULL,
- `REQUIRED_TO_COMMANDLINE` smallint(6) DEFAULT NULL,
- `DATA_MOVEMENT` smallint(6) DEFAULT NULL,
- `DATA_NAME_LOCATION` varchar(255) DEFAULT NULL,
- `SEARCH_QUERY` varchar(255) DEFAULT NULL,
- `APP_ARGUMENT` varchar(255) DEFAULT NULL,
- `OUTPUT_STREAMING` smallint(6) DEFAULT NULL,
- `METADATA` varchar(4096) DEFAULT NULL,
- PRIMARY KEY (`INTERFACE_ID`,`OUTPUT_KEY`),
- CONSTRAINT `application_output_ibfk_1` FOREIGN KEY (`INTERFACE_ID`) REFERENCES `APPLICATION_INTERFACE` (`INTERFACE_ID`) ON DELETE CASCADE
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
-/*!40101 SET character_set_client = @saved_cs_client */;
-
---
--- Dumping data for table `APPLICATION_OUTPUT`
---
-
-LOCK TABLES `APPLICATION_OUTPUT` WRITE;
-/*!40000 ALTER TABLE `APPLICATION_OUTPUT` DISABLE KEYS */;
-INSERT INTO `APPLICATION_OUTPUT` VALUES ('Echo_661f23c7-eca7-49ba-987b-55f4202b60bb','Echo-Standard-Error','','STDERR',1,0,0,NULL,'','',0, NULL),('Echo_661f23c7-eca7-49ba-987b-55f4202b60bb','Echo-Standard-Out','','STDOUT',1,0,0,NULL,'','',0, NULL);
-/*!40000 ALTER TABLE `APPLICATION_OUTPUT` ENABLE KEYS */;
-UNLOCK TABLES;
-
---
--- Table structure for table `APP_ENVIRONMENT`
---
-
-DROP TABLE IF EXISTS `APP_ENVIRONMENT`;
-/*!40101 SET @saved_cs_client = @@character_set_client */;
-/*!40101 SET character_set_client = utf8 */;
-CREATE TABLE `APP_ENVIRONMENT` (
- `DEPLOYMENT_ID` varchar(255) NOT NULL,
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--- Table structure for table `GATEWAY`
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---
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-/*!40101 SET character_set_client = utf8 */;
-CREATE TABLE `ENTITY_TYPE` (
- `ENTITY_TYPE_ID` varchar(255) NOT NULL,
- `DOMAIN_ID` varchar(255) NOT NULL,
- `NAME` varchar(255) NOT NULL,
- `DESCRIPTION` varchar(255) DEFAULT NULL,
- `CREATED_TIME` bigint(20) NOT NULL,
- `UPDATED_TIME` bigint(20) NOT NULL,
- PRIMARY KEY (`ENTITY_TYPE_ID`,`DOMAIN_ID`),
- KEY `DOMAIN_ID` (`DOMAIN_ID`),
- CONSTRAINT `entity_type_ibfk_1` FOREIGN KEY (`DOMAIN_ID`) REFERENCES `DOMAIN` (`DOMAIN_ID`) ON DELETE CASCADE ON UPDATE NO ACTION
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
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--- Dumping data for table `ENTITY_TYPE`
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-INSERT INTO `ENTITY_TYPE` VALUES ('default:APPLICATION_DEPLOYMENT','default','APPLICATION-DEPLOYMENT','Application Deployment entity type',1551138011706,1551138011706),('default:CREDENTIAL_TOKEN','default','CREDENTIAL_TOKEN','Credential Store Token entity type',1551138011735,1551138011735),('default:EXPERIMENT','default','EXPERIMENT','Experiment entity type',1551138011685,1551138011685),('default:FILE','default','FILE','File entity type',1551138011696,1551138011696),('default:GROUP_RESOU [...]
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--- Table structure for table `GROUP_ADMIN`
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- `GROUP_ID` varchar(255) NOT NULL,
- `DOMAIN_ID` varchar(255) NOT NULL,
- PRIMARY KEY (`ADMIN_ID`,`GROUP_ID`,`DOMAIN_ID`),
- KEY `ADMIN_ID` (`ADMIN_ID`,`DOMAIN_ID`),
- CONSTRAINT `group_admin_ibfk_1` FOREIGN KEY (`ADMIN_ID`, `DOMAIN_ID`) REFERENCES `SHARING_USER` (`USER_ID`, `DOMAIN_ID`) ON DELETE CASCADE ON UPDATE NO ACTION
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
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---
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---
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-/*!40101 SET character_set_client = utf8 */;
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- `PARENT_ID` varchar(255) NOT NULL,
- `CHILD_ID` varchar(255) NOT NULL,
- `DOMAIN_ID` varchar(255) NOT NULL,
- `CHILD_TYPE` varchar(255) NOT NULL,
- `CREATED_TIME` bigint(20) NOT NULL,
- `UPDATED_TIME` bigint(20) NOT NULL,
- PRIMARY KEY (`PARENT_ID`,`CHILD_ID`,`DOMAIN_ID`),
- KEY `PARENT_ID` (`PARENT_ID`,`DOMAIN_ID`),
- KEY `CHILD_ID` (`CHILD_ID`,`DOMAIN_ID`),
- CONSTRAINT `group_membership_ibfk_1` FOREIGN KEY (`PARENT_ID`, `DOMAIN_ID`) REFERENCES `USER_GROUP` (`GROUP_ID`, `DOMAIN_ID`) ON DELETE CASCADE ON UPDATE NO ACTION,
- CONSTRAINT `group_membership_ibfk_2` FOREIGN KEY (`CHILD_ID`, `DOMAIN_ID`) REFERENCES `USER_GROUP` (`GROUP_ID`, `DOMAIN_ID`) ON DELETE CASCADE ON UPDATE NO ACTION
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
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-
---
--- Table structure for table `PERMISSION_TYPE`
---
-
-DROP TABLE IF EXISTS `PERMISSION_TYPE`;
-/*!40101 SET @saved_cs_client = @@character_set_client */;
-/*!40101 SET character_set_client = utf8 */;
-CREATE TABLE `PERMISSION_TYPE` (
- `PERMISSION_TYPE_ID` varchar(255) NOT NULL,
- `DOMAIN_ID` varchar(255) NOT NULL,
- `NAME` varchar(255) NOT NULL,
- `DESCRIPTION` varchar(255) DEFAULT NULL,
- `CREATED_TIME` bigint(20) NOT NULL,
- `UPDATED_TIME` bigint(20) NOT NULL,
- PRIMARY KEY (`PERMISSION_TYPE_ID`,`DOMAIN_ID`),
- KEY `DOMAIN_ID` (`DOMAIN_ID`),
- CONSTRAINT `permission_type_ibfk_1` FOREIGN KEY (`DOMAIN_ID`) REFERENCES `DOMAIN` (`DOMAIN_ID`) ON DELETE CASCADE ON UPDATE NO ACTION
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
-/*!40101 SET character_set_client = @saved_cs_client */;
-
---
--- Dumping data for table `PERMISSION_TYPE`
---
-
-LOCK TABLES `PERMISSION_TYPE` WRITE;
-/*!40000 ALTER TABLE `PERMISSION_TYPE` DISABLE KEYS */;
-INSERT INTO `PERMISSION_TYPE` VALUES ('default:OWNER','default','OWNER','GLOBAL permission to default',1551138011561,1551138011561),('default:READ','default','READ','Read permission type',1551138011783,1551138011783),('default:WRITE','default','WRITE','Write permission type',1551138011808,1551138011808),('default:MANAGE_SHARING','default','MANAGE_SHARING','Sharing permission type',1551138011853,1551138011853);
-/*!40000 ALTER TABLE `PERMISSION_TYPE` ENABLE KEYS */;
-UNLOCK TABLES;
-
---
--- Table structure for table `SHARING`
---
-
-DROP TABLE IF EXISTS `SHARING`;
-/*!40101 SET @saved_cs_client = @@character_set_client */;
-/*!40101 SET character_set_client = utf8 */;
-CREATE TABLE `SHARING` (
- `PERMISSION_TYPE_ID` varchar(255) NOT NULL,
- `ENTITY_ID` varchar(255) NOT NULL,
- `DOMAIN_ID` varchar(255) NOT NULL,
- `GROUP_ID` varchar(255) NOT NULL,
- `SHARING_TYPE` varchar(255) NOT NULL,
- `INHERITED_PARENT_ID` varchar(255) NOT NULL,
- `CREATED_TIME` bigint(20) NOT NULL,
- `UPDATED_TIME` bigint(20) NOT NULL,
- PRIMARY KEY (`PERMISSION_TYPE_ID`,`ENTITY_ID`,`GROUP_ID`,`DOMAIN_ID`,`INHERITED_PARENT_ID`),
- KEY `SHARING_PERMISSION_TYPE_ID_DOMAIN_ID_FK` (`PERMISSION_TYPE_ID`,`DOMAIN_ID`),
- KEY `SHARING_ENTITY_ID_DOMAIN_ID_FK` (`ENTITY_ID`,`DOMAIN_ID`),
- KEY `SHARING_INHERITED_PARENT_ID_DOMAIN_ID_FK` (`INHERITED_PARENT_ID`,`DOMAIN_ID`),
- KEY `SHARING_GROUP_ID_DOMAIN_ID_FK` (`GROUP_ID`,`DOMAIN_ID`),
- CONSTRAINT `SHARING_ENTITY_ID_DOMAIN_ID_FK` FOREIGN KEY (`ENTITY_ID`, `DOMAIN_ID`) REFERENCES `ENTITY` (`ENTITY_ID`, `DOMAIN_ID`) ON DELETE CASCADE ON UPDATE NO ACTION,
- CONSTRAINT `SHARING_GROUP_ID_DOMAIN_ID_FK` FOREIGN KEY (`GROUP_ID`, `DOMAIN_ID`) REFERENCES `USER_GROUP` (`GROUP_ID`, `DOMAIN_ID`) ON DELETE CASCADE ON UPDATE NO ACTION,
- CONSTRAINT `SHARING_INHERITED_PARENT_ID_DOMAIN_ID_FK` FOREIGN KEY (`INHERITED_PARENT_ID`, `DOMAIN_ID`) REFERENCES `ENTITY` (`ENTITY_ID`, `DOMAIN_ID`) ON DELETE CASCADE ON UPDATE NO ACTION,
- CONSTRAINT `SHARING_PERMISSION_TYPE_ID_DOMAIN_ID_FK` FOREIGN KEY (`PERMISSION_TYPE_ID`, `DOMAIN_ID`) REFERENCES `PERMISSION_TYPE` (`PERMISSION_TYPE_ID`, `DOMAIN_ID`) ON DELETE CASCADE ON UPDATE NO ACTION
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
-/*!40101 SET character_set_client = @saved_cs_client */;
-
---
--- Dumping data for table `SHARING`
---
-
-LOCK TABLES `SHARING` WRITE;
-/*!40000 ALTER TABLE `SHARING` DISABLE KEYS */;
-INSERT INTO `SHARING` VALUES ('default:OWNER','46a99a5a-8b55-4982-bfd7-90fe72b00d46','default','default-admin@default','DIRECT_CASCADING','46a99a5a-8b55-4982-bfd7-90fe72b00d46',1551139607745,1551139607745),('default:OWNER','af03c63d-a40e-4ed1-aee0-759a6ed0202c','default','default-admin@default','DIRECT_CASCADING','af03c63d-a40e-4ed1-aee0-759a6ed0202c',1552318871935,1552318871935),('default:OWNER','Clone_of_Clone_of_Echo_on_Mar_11,_2019_12:24_PM_9182a6b7-520d-4a8d-92e1-24463aae530b','defa [...]
-/*!40000 ALTER TABLE `SHARING` ENABLE KEYS */;
-UNLOCK TABLES;
-
---
--- Table structure for table `SHARING_USER`
---
-
-DROP TABLE IF EXISTS `SHARING_USER`;
-/*!40101 SET @saved_cs_client = @@character_set_client */;
-/*!40101 SET character_set_client = utf8 */;
-CREATE TABLE `SHARING_USER` (
- `USER_ID` varchar(255) NOT NULL,
- `DOMAIN_ID` varchar(255) NOT NULL,
- `USER_NAME` varchar(255) NOT NULL,
- `FIRST_NAME` varchar(255) DEFAULT NULL,
- `LAST_NAME` varchar(255) DEFAULT NULL,
- `EMAIL` varchar(255) DEFAULT NULL,
- `ICON` blob,
- `CREATED_TIME` bigint(20) NOT NULL,
- `UPDATED_TIME` bigint(20) NOT NULL,
- PRIMARY KEY (`USER_ID`,`DOMAIN_ID`),
- KEY `DOMAIN_ID` (`DOMAIN_ID`),
- CONSTRAINT `sharing_user_ibfk_1` FOREIGN KEY (`DOMAIN_ID`) REFERENCES `DOMAIN` (`DOMAIN_ID`) ON DELETE CASCADE ON UPDATE NO ACTION
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
-/*!40101 SET character_set_client = @saved_cs_client */;
-
---
--- Dumping data for table `SHARING_USER`
---
-
-LOCK TABLES `SHARING_USER` WRITE;
-/*!40000 ALTER TABLE `SHARING_USER` DISABLE KEYS */;
-INSERT INTO `SHARING_USER` VALUES ('default-admin@default','default','dim Upe',NULL,NULL,'dimuthu.upeksha2@gmail.com',NULL,1551138011603,1551138404868);
-/*!40000 ALTER TABLE `SHARING_USER` ENABLE KEYS */;
-UNLOCK TABLES;
-
---
--- Table structure for table `USER_GROUP`
---
-
-DROP TABLE IF EXISTS `USER_GROUP`;
-/*!40101 SET @saved_cs_client = @@character_set_client */;
-/*!40101 SET character_set_client = utf8 */;
-CREATE TABLE `USER_GROUP` (
- `GROUP_ID` varchar(255) NOT NULL,
- `DOMAIN_ID` varchar(255) NOT NULL,
- `NAME` varchar(255) NOT NULL,
- `DESCRIPTION` varchar(255) DEFAULT NULL,
- `OWNER_ID` varchar(255) NOT NULL,
- `GROUP_TYPE` varchar(255) NOT NULL,
- `GROUP_CARDINALITY` varchar(255) NOT NULL,
- `CREATED_TIME` bigint(20) NOT NULL,
- `UPDATED_TIME` bigint(20) NOT NULL,
- PRIMARY KEY (`GROUP_ID`,`DOMAIN_ID`),
- KEY `OWNER_ID` (`OWNER_ID`,`DOMAIN_ID`),
- CONSTRAINT `user_group_ibfk_1` FOREIGN KEY (`OWNER_ID`, `DOMAIN_ID`) REFERENCES `SHARING_USER` (`USER_ID`, `DOMAIN_ID`) ON DELETE CASCADE ON UPDATE NO ACTION
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
-/*!40101 SET character_set_client = @saved_cs_client */;
-
---
--- Dumping data for table `USER_GROUP`
---
-
-LOCK TABLES `USER_GROUP` WRITE;
-/*!40000 ALTER TABLE `USER_GROUP` DISABLE KEYS */;
-INSERT INTO `USER_GROUP` VALUES ('Admin_Users_ba3e4af7-9b1d-4f46-b43a-2b44790f6868','default','Admin Users','Admin users group.','default-admin@default','DOMAIN_LEVEL_GROUP','MULTI_USER',1551138405064,1551138405064),('default-admin@default','default','dim Upe','user dim Upe group','default-admin@default','USER_LEVEL_GROUP','SINGLE_USER',0,1551138404890),('Gateway_Users_2e4e6eb4-05ad-4a0f-92d1-02aa26c56004','default','Gateway Users','Default group for users of the gateway.','default-admin [...]
-/*!40000 ALTER TABLE `USER_GROUP` ENABLE KEYS */;
-UNLOCK TABLES;
-
---
--- Current Database: `workflow_catalog`
---
-
-CREATE DATABASE /*!32312 IF NOT EXISTS*/ `workflow_catalog` /*!40100 DEFAULT CHARACTER SET utf8mb4 COLLATE utf8mb4_unicode_ci */;
-
-USE `workflow_catalog`;
-
---
--- Current Database: `research_catalog`
---
-
-CREATE DATABASE /*!32312 IF NOT EXISTS*/ `research_catalog` /*!40100 DEFAULT CHARACTER SET utf8mb4 COLLATE utf8mb4_unicode_ci */;
-
-USE `research_catalog`;
-
---
--- Current Database: `app_catalog`
---
-
-USE `app_catalog`;
-
---
--- Current Database: `credential_store`
---
-
-USE `credential_store`;
-
---
--- Current Database: `experiment_catalog`
---
-
-USE `experiment_catalog`;
-
---
--- Final view structure for view `experiment_summary`
---
-
-/*!50001 DROP VIEW IF EXISTS `experiment_summary`*/;
-/*!50001 SET @saved_cs_client = @@character_set_client */;
-/*!50001 SET @saved_cs_results = @@character_set_results */;
-/*!50001 SET @saved_col_connection = @@collation_connection */;
-/*!50001 SET character_set_client = utf8mb4 */;
-/*!50001 SET character_set_results = utf8mb4 */;
-/*!50001 SET collation_connection = utf8mb4_unicode_ci */;
-/*!50001 CREATE ALGORITHM=UNDEFINED */
-/*!50013 DEFINER=`root`@`%` SQL SECURITY DEFINER */
-/*!50001 VIEW `experiment_summary` AS select `E`.`EXPERIMENT_ID` AS `EXPERIMENT_ID`,`E`.`PROJECT_ID` AS `PROJECT_ID`,`E`.`GATEWAY_ID` AS `GATEWAY_ID`,`E`.`USER_NAME` AS `USER_NAME`,`E`.`EXECUTION_ID` AS `EXECUTION_ID`,`E`.`EXPERIMENT_NAME` AS `EXPERIMENT_NAME`,`E`.`CREATION_TIME` AS `CREATION_TIME`,`E`.`DESCRIPTION` AS `DESCRIPTION`,`es`.`STATE` AS `STATE`,`UD`.`RESOURCE_HOST_ID` AS `RESOURCE_HOST_ID`,`es`.`TIME_OF_STATE_CHANGE` AS `TIME_OF_STATE_CHANGE` from ((`EXPERIMENT` `E` left join [...]
-/*!50001 SET character_set_client = @saved_cs_client */;
-/*!50001 SET character_set_results = @saved_cs_results */;
-/*!50001 SET collation_connection = @saved_col_connection */;
-
---
--- Final view structure for view `latest_experiment_status`
---
-
-/*!50001 DROP VIEW IF EXISTS `latest_experiment_status`*/;
-/*!50001 SET @saved_cs_client = @@character_set_client */;
-/*!50001 SET @saved_cs_results = @@character_set_results */;
-/*!50001 SET @saved_col_connection = @@collation_connection */;
-/*!50001 SET character_set_client = utf8mb4 */;
-/*!50001 SET character_set_results = utf8mb4 */;
-/*!50001 SET collation_connection = utf8mb4_unicode_ci */;
-/*!50001 CREATE ALGORITHM=UNDEFINED */
-/*!50013 DEFINER=`root`@`%` SQL SECURITY DEFINER */
-/*!50001 VIEW `latest_experiment_status` AS select `ES1`.`EXPERIMENT_ID` AS `EXPERIMENT_ID`,`ES1`.`STATE` AS `STATE`,`ES1`.`TIME_OF_STATE_CHANGE` AS `TIME_OF_STATE_CHANGE` from (`EXPERIMENT_STATUS` `ES1` left join `EXPERIMENT_STATUS` `ES2` on(((`ES1`.`EXPERIMENT_ID` = `ES2`.`EXPERIMENT_ID`) and (`ES1`.`TIME_OF_STATE_CHANGE` < `ES2`.`TIME_OF_STATE_CHANGE`)))) where isnull(`ES2`.`TIME_OF_STATE_CHANGE`) */;
-/*!50001 SET character_set_client = @saved_cs_client */;
-/*!50001 SET character_set_results = @saved_cs_results */;
-/*!50001 SET collation_connection = @saved_col_connection */;
-
---
--- Current Database: `profile_service`
---
-
-USE `profile_service`;
-
---
--- Current Database: `replica_catalog`
---
-
-USE `replica_catalog`;
-
---
--- Current Database: `sharing_catalog`
---
-
-USE `sharing_catalog`;
-
---
--- Current Database: `workflow_catalog`
---
-
-USE `workflow_catalog`;
-/*!40103 SET TIME_ZONE=@OLD_TIME_ZONE */;
-
-/*!40101 SET SQL_MODE=@OLD_SQL_MODE */;
-/*!40014 SET FOREIGN_KEY_CHECKS=@OLD_FOREIGN_KEY_CHECKS */;
-/*!40014 SET UNIQUE_CHECKS=@OLD_UNIQUE_CHECKS */;
-/*!40101 SET CHARACTER_SET_CLIENT=@OLD_CHARACTER_SET_CLIENT */;
-/*!40101 SET CHARACTER_SET_RESULTS=@OLD_CHARACTER_SET_RESULTS */;
-/*!40101 SET COLLATION_CONNECTION=@OLD_COLLATION_CONNECTION */;
-/*!40111 SET SQL_NOTES=@OLD_SQL_NOTES */;
-
--- Dump completed on 2019-03-11 19:13:25
diff --git a/.devcontainer/database_scripts/init/02-sharing-registry-migrations.sql b/.devcontainer/database_scripts/init/02-sharing-registry-migrations.sql
deleted file mode 100644
index 9b5733b8b0..0000000000
--- a/.devcontainer/database_scripts/init/02-sharing-registry-migrations.sql
+++ /dev/null
@@ -1,4 +0,0 @@
-use sharing_catalog;
-
-ALTER TABLE DOMAIN ADD COLUMN IF NOT EXISTS INITIAL_USER_GROUP_ID varchar(255);
-ALTER TABLE DOMAIN ADD CONSTRAINT `DOMAIN_INITIAL_USER_GROUP_ID_FK` FOREIGN KEY IF NOT EXISTS (INITIAL_USER_GROUP_ID, DOMAIN_ID) REFERENCES USER_GROUP(GROUP_ID, DOMAIN_ID) ON DELETE CASCADE ON UPDATE NO ACTION;
diff --git a/.devcontainer/database_scripts/init/03-appcatalog-migrations.sql b/.devcontainer/database_scripts/init/03-appcatalog-migrations.sql
deleted file mode 100644
index e7ef4a55c8..0000000000
--- a/.devcontainer/database_scripts/init/03-appcatalog-migrations.sql
+++ /dev/null
@@ -1,22 +0,0 @@
-use app_catalog;
-
-ALTER TABLE APPLICATION_INPUT ADD COLUMN IF NOT EXISTS OVERRIDE_FILENAME VARCHAR(255);
--- AIRAVATA-3126
-CREATE TABLE IF NOT EXISTS COMPUTE_RESOURCE_RESERVATION -- ComputeResourceReservationEntity
- (RESERVATION_ID VARCHAR(255) NOT NULL, END_TIME TIMESTAMP NOT NULL, RESERVATION_NAME VARCHAR(255) NOT NULL, START_TIME TIMESTAMP NOT NULL, RESOURCE_ID VARCHAR(255) NOT NULL, GROUP_RESOURCE_PROFILE_ID VARCHAR(255) NOT NULL, PRIMARY KEY (RESERVATION_ID)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-CREATE TABLE IF NOT EXISTS COMPUTE_RESOURCE_RESERVATION_QUEUE (RESERVATION_ID VARCHAR(255), QUEUE_NAME VARCHAR(255) NOT NULL
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-CREATE INDEX IF NOT EXISTS I_CMPTN_Q_RESERVATION_ID ON COMPUTE_RESOURCE_RESERVATION_QUEUE (RESERVATION_ID);
-ALTER TABLE COMPUTE_RESOURCE_RESERVATION ADD CONSTRAINT FK_COMPUTE_RESOURCE_RESERVATION FOREIGN KEY IF NOT EXISTS (RESOURCE_ID, GROUP_RESOURCE_PROFILE_ID) REFERENCES GROUP_COMPUTE_RESOURCE_PREFERENCE (RESOURCE_ID, GROUP_RESOURCE_PROFILE_ID) ON DELETE CASCADE;
-
--- AIRAVATA-3327: Remove deprecated reservation fields
---alter table GROUP_COMPUTE_RESOURCE_PREFERENCE drop column IF EXISTS RESERVATION;
---alter table GROUP_COMPUTE_RESOURCE_PREFERENCE drop column IF EXISTS RESERVATION_START_TIME;
---alter table GROUP_COMPUTE_RESOURCE_PREFERENCE drop column IF EXISTS RESERVATION_END_TIME;
-
--- AIRAVATA-3369: Convert USER_FRIENDLY_DESC from VARCHAR to TEXT (CLOB)
-alter table APPLICATION_INPUT modify column USER_FRIENDLY_DESC TEXT;
-
--- Add cleanAfterStaged flag to APPLICATION_INTERFACE
-ALTER TABLE APPLICATION_INTERFACE ADD COLUMN IF NOT EXISTS CLEAN_AFTER_STAGED SMALLINT DEFAULT 0;
diff --git a/.devcontainer/database_scripts/init/04-expcatalog-migrations.sql b/.devcontainer/database_scripts/init/04-expcatalog-migrations.sql
deleted file mode 100644
index bb32d3f438..0000000000
--- a/.devcontainer/database_scripts/init/04-expcatalog-migrations.sql
+++ /dev/null
@@ -1,54 +0,0 @@
-use experiment_catalog;
-
-ALTER TABLE EXPERIMENT_INPUT ADD COLUMN IF NOT EXISTS OVERRIDE_FILENAME VARCHAR(255);
-ALTER TABLE PROCESS_INPUT ADD COLUMN IF NOT EXISTS OVERRIDE_FILENAME VARCHAR(255);
-
-CREATE TABLE IF NOT EXISTS GATEWAY_USAGE_REPORTING_COMMAND (
- GATEWAY_ID VARCHAR(255) NOT NULL,
- COMPUTE_RESOURCE_ID VARCHAR(255) NOT NULL,
- COMMAND LONGTEXT NOT NULL,
- PRIMARY KEY (GATEWAY_ID, COMPUTE_RESOURCE_ID)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
--- AIRAVATA-3369: Convert USER_FRIENDLY_DESCRIPTION from VARCHAR to TEXT (CLOB)
-alter table EXPERIMENT_INPUT modify column USER_FRIENDLY_DESCRIPTION TEXT;
-alter table PROCESS_INPUT modify column USER_FRIENDLY_DESCRIPTION TEXT;
-
-CREATE TABLE IF NOT EXISTS COMPUTE_RESOURCE_SCHEDULING (
- EXPERIMENT_ID varchar(255) NOT NULL,
- RESOURCE_HOST_ID varchar(255) NOT NULL,
- TOTAL_CPU_COUNT INT,
- NODE_COUNT INT,
- NUMBER_OF_THREADS INT,
- QUEUE_NAME varchar(255) NOT NULL,
- WALL_TIME_LIMIT INT,
- TOTAL_PHYSICAL_MEMORY INT,
- STATIC_WORKING_DIR varchar(255),
- OVERRIDE_LOGIN_USER_NAME varchar(255),
- OVERRIDE_SCRATCH_LOCATION varchar(255),
- OVERRIDE_ALLOCATION_PROJECT_NUMBER varchar(255),
- PARALLEL_GROUP_COUNT INT,
- PRIMARY KEY (EXPERIMENT_ID,RESOURCE_HOST_ID,QUEUE_NAME),
- FOREIGN KEY (EXPERIMENT_ID) REFERENCES EXPERIMENT(EXPERIMENT_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
--- Rename storage resource ID to input storage resource ID
-ALTER TABLE USER_CONFIGURATION_DATA CHANGE COLUMN STORAGE_RESOURCE_ID INPUT_STORAGE_RESOURCE_ID VARCHAR(255) DEFAULT NULL;
-ALTER TABLE PROCESS CHANGE COLUMN STORAGE_RESOURCE_ID INPUT_STORAGE_RESOURCE_ID VARCHAR(255) DEFAULT NULL;
-
--- Add output storage resource ID columns
-ALTER TABLE USER_CONFIGURATION_DATA ADD COLUMN IF NOT EXISTS OUTPUT_STORAGE_RESOURCE_ID VARCHAR(255) DEFAULT NULL;
-ALTER TABLE PROCESS ADD COLUMN IF NOT EXISTS OUTPUT_STORAGE_RESOURCE_ID VARCHAR(255) DEFAULT NULL;
-
--- Update OUTPUT_STORAGE_RESOURCE_ID with INPUT_STORAGE_RESOURCE_ID when missing
-UPDATE USER_CONFIGURATION_DATA
-SET OUTPUT_STORAGE_RESOURCE_ID = INPUT_STORAGE_RESOURCE_ID
-WHERE (OUTPUT_STORAGE_RESOURCE_ID IS NULL OR OUTPUT_STORAGE_RESOURCE_ID = '')
- AND INPUT_STORAGE_RESOURCE_ID IS NOT NULL
- AND INPUT_STORAGE_RESOURCE_ID != '';
-
-UPDATE PROCESS
-SET OUTPUT_STORAGE_RESOURCE_ID = INPUT_STORAGE_RESOURCE_ID
-WHERE (OUTPUT_STORAGE_RESOURCE_ID IS NULL OR OUTPUT_STORAGE_RESOURCE_ID = '')
- AND INPUT_STORAGE_RESOURCE_ID IS NOT NULL
- AND INPUT_STORAGE_RESOURCE_ID != '';
\ No newline at end of file
diff --git a/.devcontainer/database_scripts/init/05-replica-catalog-migrations.sql b/.devcontainer/database_scripts/init/05-replica-catalog-migrations.sql
deleted file mode 100644
index 1c3b8d1c3f..0000000000
--- a/.devcontainer/database_scripts/init/05-replica-catalog-migrations.sql
+++ /dev/null
@@ -1,27 +0,0 @@
-USE replica_catalog;
-
--- AIRAVATA-3697: Support file names that have UTF8 characters and that are long
-ALTER TABLE
- DATA_PRODUCT
-MODIFY
- PRODUCT_NAME text CHARACTER SET utf8mb4 COLLATE utf8mb4_bin;
-
-ALTER TABLE
- DATA_PRODUCT
-MODIFY
- PRODUCT_DESCRIPTION varchar(255) CHARACTER SET utf8mb4 COLLATE utf8mb4_bin;
-
-ALTER TABLE
- DATA_REPLICA_LOCATION
-MODIFY
- REPLICA_NAME text CHARACTER SET utf8mb4 COLLATE utf8mb4_bin;
-
-ALTER TABLE
- DATA_REPLICA_LOCATION
-MODIFY
- REPLICA_DESCRIPTION varchar(255) CHARACTER SET utf8mb4 COLLATE utf8mb4_bin;
-
-ALTER TABLE
- DATA_REPLICA_LOCATION
-MODIFY
- FILE_PATH varchar(1024) CHARACTER SET utf8mb4 COLLATE utf8mb4_bin;
diff --git a/.devcontainer/database_scripts/init/06-cloud-execution-support-migration.sql b/.devcontainer/database_scripts/init/06-cloud-execution-support-migration.sql
deleted file mode 100644
index 81718b8f96..0000000000
--- a/.devcontainer/database_scripts/init/06-cloud-execution-support-migration.sql
+++ /dev/null
@@ -1,84 +0,0 @@
-USE app_catalog;
-
--- Add RESOURCE_TYPE column to base table
-ALTER TABLE `GROUP_COMPUTE_RESOURCE_PREFERENCE`
- ADD COLUMN `RESOURCE_TYPE` VARCHAR(255) NOT NULL DEFAULT 'SLURM';
-
--- Make sure all future inserts require an explicit RESOURCE_TYPE
-ALTER TABLE `GROUP_COMPUTE_RESOURCE_PREFERENCE`
- ALTER COLUMN `RESOURCE_TYPE` DROP DEFAULT;
-
--- Create the new Slurm-specific table
-CREATE TABLE `SLURM_GROUP_COMPUTE_RESOURCE_PREFERENCE`
-(
- `RESOURCE_ID` VARCHAR(255) NOT NULL,
- `GROUP_RESOURCE_PROFILE_ID` VARCHAR(255) NOT NULL,
- `PREFERED_BATCH_QUEUE` VARCHAR(255) DEFAULT NULL,
- `ALLOCATION_PROJECT_NUMBER` VARCHAR(255) DEFAULT NULL,
- `USAGE_REPORTING_GATEWAY_ID` VARCHAR(255) DEFAULT NULL,
- `QUALITY_OF_SERVICE` VARCHAR(255) DEFAULT NULL,
- `RESERVATION` VARCHAR(255) DEFAULT NULL,
- `RESERVATION_START_TIME` TIMESTAMP NOT NULL DEFAULT CURRENT_TIMESTAMP ON UPDATE CURRENT_TIMESTAMP,
- `RESERVATION_END_TIME` TIMESTAMP NOT NULL DEFAULT '0000-00-00 00:00:00',
- `SSH_ACCOUNT_PROVISIONER` VARCHAR(255) DEFAULT NULL,
- `SSH_ACCOUNT_PROVISIONER_ADDITIONAL_INFO` TEXT DEFAULT NULL,
- PRIMARY KEY (`RESOURCE_ID`, `GROUP_RESOURCE_PROFILE_ID`),
- CONSTRAINT `FK_SLURM_PREF_TO_BASE` FOREIGN KEY (`RESOURCE_ID`, `GROUP_RESOURCE_PROFILE_ID`)
- REFERENCES `GROUP_COMPUTE_RESOURCE_PREFERENCE` (`RESOURCE_ID`, `GROUP_RESOURCE_PROFILE_ID`)
- ON DELETE CASCADE
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
--- Migrate Slurm-specific field data from the base table into the new Slurm table
-INSERT INTO `SLURM_GROUP_COMPUTE_RESOURCE_PREFERENCE` (
- `RESOURCE_ID`,
- `GROUP_RESOURCE_PROFILE_ID`,
- `PREFERED_BATCH_QUEUE`,
- `ALLOCATION_PROJECT_NUMBER`,
- `USAGE_REPORTING_GATEWAY_ID`,
- `QUALITY_OF_SERVICE`,
- `RESERVATION`,
- `RESERVATION_START_TIME`,
- `RESERVATION_END_TIME`,
- `SSH_ACCOUNT_PROVISIONER`,
- `SSH_ACCOUNT_PROVISIONER_ADDITIONAL_INFO`
-)
-SELECT
- `RESOURCE_ID`,
- `GROUP_RESOURCE_PROFILE_ID`,
- `PREFERED_BATCH_QUEUE`,
- `ALLOCATION_PROJECT_NUMBER`,
- `USAGE_REPORTING_GATEWAY_ID`,
- `QUALITY_OF_SERVICE`,
- `RESERVATION`,
- `RESERVATION_START_TIME`,
- `RESERVATION_END_TIME`,
- `SSH_ACCOUNT_PROVISIONER`,
- `SSH_ACCOUNT_PROVISIONER_ADDITIONAL_INFO`
-FROM `GROUP_COMPUTE_RESOURCE_PREFERENCE`;
-
--- Drop the Slurm-specific columns from the base table
-ALTER TABLE `GROUP_COMPUTE_RESOURCE_PREFERENCE`
-DROP COLUMN `PREFERED_BATCH_QUEUE`,
- DROP COLUMN `ALLOCATION_PROJECT_NUMBER`,
- DROP COLUMN `USAGE_REPORTING_GATEWAY_ID`,
- DROP COLUMN `QUALITY_OF_SERVICE`,
- DROP COLUMN `RESERVATION`,
- DROP COLUMN `RESERVATION_START_TIME`,
- DROP COLUMN `RESERVATION_END_TIME`,
- DROP COLUMN `SSH_ACCOUNT_PROVISIONER`,
- DROP COLUMN `SSH_ACCOUNT_PROVISIONER_ADDITIONAL_INFO`;
-
--- Create the AWS-specific group compute preference table
-CREATE TABLE `AWS_GROUP_COMPUTE_RESOURCE_PREFERENCE`
-(
- `RESOURCE_ID` VARCHAR(255) NOT NULL,
- `GROUP_RESOURCE_PROFILE_ID` VARCHAR(255) NOT NULL,
- `AWS_REGION` VARCHAR(255) NOT NULL,
- `PREFERRED_AMI_ID` VARCHAR(255) NOT NULL,
- `PREFERRED_INSTANCE_TYPE` VARCHAR(255) NOT NULL,
-
- PRIMARY KEY (`RESOURCE_ID`, `GROUP_RESOURCE_PROFILE_ID`),
- CONSTRAINT `FK_AWS_PREF_TO_BASE` FOREIGN KEY (`RESOURCE_ID`, `GROUP_RESOURCE_PROFILE_ID`)
- REFERENCES `GROUP_COMPUTE_RESOURCE_PREFERENCE` (`RESOURCE_ID`, `GROUP_RESOURCE_PROFILE_ID`)
- ON DELETE CASCADE
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
\ No newline at end of file
diff --git a/.devcontainer/database_scripts/init/07-cleanup-strategy-migration.sql b/.devcontainer/database_scripts/init/07-cleanup-strategy-migration.sql
deleted file mode 100644
index 4b40dbd7ed..0000000000
--- a/.devcontainer/database_scripts/init/07-cleanup-strategy-migration.sql
+++ /dev/null
@@ -1,4 +0,0 @@
-USE experiment_catalog;
-
--- Add cleanupStrategy flag to EXPERIMENT
-ALTER TABLE EXPERIMENT ADD COLUMN IF NOT EXISTS CLEANUP_STRATEGY VARCHAR(255) DEFAULT 'NONE';
diff --git a/.devcontainer/devcontainer.json b/.devcontainer/devcontainer.json
deleted file mode 100644
index ce760a6334..0000000000
--- a/.devcontainer/devcontainer.json
+++ /dev/null
@@ -1,27 +0,0 @@
-// For format details, see https://aka.ms/devcontainer.json. For config options, see the
-// README at: https://github.com/devcontainers/templates/tree/main/src/ubuntu
-{
- "name": "Airavata",
- "dockerComposeFile": "docker-compose.yml",
- "service": "devcontainer",
- "features": {},
- "workspaceFolder": "/home/developer/workspace",
- "forwardPorts": [],
- "customizations": {
- "vscode": {
- "extensions": [
- "esbenp.prettier-vscode",
- "eamodio.gitlens",
- "foxundermoon.shell-format",
- "golang.go",
- "lkrms.inifmt",
- "ms-python.python",
- "ms-python.autopep8",
- "ms-python.isort",
- "ms-toolsai.jupyter",
- "njpwerner.autodocstring",
- "vscjava.vscode-java-pack",
- ]
- },
- }
-}
\ No newline at end of file
diff --git a/.devcontainer/docker-compose-alt.yml b/.devcontainer/docker-compose-alt.yml
deleted file mode 100644
index 50ff2937cc..0000000000
--- a/.devcontainer/docker-compose-alt.yml
+++ /dev/null
@@ -1,279 +0,0 @@
-# Licensed to the Apache Software Foundation (ASF) under one
-# or more contributor license agreements. See the NOTICE file
-# distributed with this work for additional information
-# regarding copyright ownership. The ASF licenses this file
-# to you under the Apache License, Version 2.0 (the
-# "License"); you may not use this file except in compliance
-# with the License. You may obtain a copy of the License at
-#
-# http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing,
-# software distributed under the License is distributed on an
-# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
-# KIND, either express or implied. See the License for the
-# specific language governing permissions and limitations
-# under the License.
-
-version: '3'
-services:
-
- controller:
- image: airavata/controller
- restart: always
- depends_on:
- - zookeeper
- - db
- - kafka
- - keycloak
- environment:
- - zookeeper.server.connection=zookeeper:2181
- command: ["/tmp/wait-for-it.sh", "zookeeper:2181", "--" , "/opt/apache-airavata-controller/bin/controller.sh"]
-
- apiserver:
- image: airavata/api-server
- restart: always
- depends_on:
- - zookeeper
- - db
- - kafka
- - keycloak
- - rabbitmq
- links:
- - "keycloak:airavata.host"
- ports:
- - "8930:8930"
- - "7878:7878"
- - "8962:8962"
- - "8960:8960"
- - "8970:8970"
- volumes:
- - ../resources/keystores:/opt/keystores
- environment:
- - registry.jdbc.driver=org.mariadb.jdbc.Driver
- - registry.jdbc.url=jdbc:mariadb://db:3306/experiment_catalog
- - registry.jdbc.user=root
- - registry.jdbc.password=123456
- - start.derby.server.mode=false
- - validationQuery=SELECT 1 from CONFIGURATION
- - enable.sharing=true
- - default.registry.user=default-admin
- - default.registry.password=123456
- - default.registry.gateway=default
- - default.registry.oauth.client.id=pga
- - default.registry.oauth.client.secret=9790c8c4-7d9b-4ccc-a820-ca5aac38d2ad
- - super.tenant.gatewayId=default
- - cluster.status.monitoring.enable=false
- - cluster.status.monitoring.repeat.time=18000
- - appcatalog.jdbc.driver=org.mariadb.jdbc.Driver
- - appcatalog.jdbc.url=jdbc:mariadb://db:3306/app_catalog
- - appcatalog.jdbc.user=root
- - appcatalog.jdbc.password=123456
- - appcatalog.validationQuery=SELECT 1 from CONFIGURATION
- - replicacatalog.jdbc.driver=org.mariadb.jdbc.Driver
- - replicacatalog.jdbc.url=jdbc:mariadb://db:3306/replica_catalog
- - replicacatalog.jdbc.user=root
- - replicacatalog.jdbc.password=123456
- - replicacatalog.validationQuery=SELECT 1 from CONFIGURATION
- - workflowcatalog.jdbc.driver=org.mariadb.jdbc.Driver
- - workflowcatalog.jdbc.url=jdbc:mariadb://db:3306/workflow_catalog
- - workflowcatalog.jdbc.user=root
- - workflowcatalog.jdbc.password=123456
- - workflowcatalog.validationQuery=SELECT 1 from CONFIGURATION
- - sharingcatalog.jdbc.driver=org.mariadb.jdbc.Driver
- - sharingcatalog.jdbc.url=jdbc:mariadb://db:3306/sharing_catalog
- - sharingcatalog.jdbc.user=root
- - sharingcatalog.jdbc.password=123456
- - sharingcatalog.validationQuery=SELECT 1 from CONFIGURATION
- - sharing_server=org.apache.airavata.sharing.registry.server.SharingRegistryServer
- - sharing.registry.server.host=0.0.0.0
- - sharing.registry.server.port=7878
- - apiserver.class=org.apache.airavata.api.server.AiravataAPIServer
- - apiserver.host=0.0.0.0
- - apiserver.port=8930
- - orchestrator=org.apache.airavata.orchestrator.server.OrchestratorServer
- - orchestrator.server.host=0.0.0.0
- - orchestrator.server.port=8940
- - orchestrator.server.min.threads=50
- - job.validators=org.apache.airavata.orchestrator.core.validator.impl.BatchQueueValidator,org.apache.airavata.orchestrator.core.validator.impl.ExperimentStatusValidator
- - enable.validation=true
- - host.scheduler=org.apache.airavata.orchestrator.core.schedule.DefaultHostScheduler
- - regserver=org.apache.airavata.registry.api.service.RegistryAPIServer
- - regserver.server.host=localhost
- - regserver.server.port=8970
- - regserver.server.min.threads=50
- - job.notification.enable=true
- - job.notification.emailids=
- - credential.store.keystore.url=/opt/keystores/airavata.sym.p12
- - credential.store.keystore.alias=airavata
- - credential.store.keystore.password=airavata
- - credential.store.jdbc.url=jdbc:mariadb://db:3306/credential_store
- - credential.store.jdbc.user=root
- - credential.store.jdbc.password=123456
- - credential.store.jdbc.driver=org.mariadb.jdbc.Driver
- - credential.store.server.host=0.0.0.0
- - credential.store.server.port=8960
- - credential.store.class=org.apache.airavata.credential.store.server.CredentialStoreServer
- - credential.store.jdbc.validationQuery=SELECT 1 from CONFIGURATION
- - rabbitmq.broker.url=amqp://guest:guest@rabbitmq:5672/develop
- - rabbitmq.status.exchange.name=status_exchange
- - rabbitmq.process.exchange.name=process_exchange
- - rabbitmq.experiment.exchange.name=experiment_exchange
- - durable.queue=false
- - prefetch.count=200
- - embedded.zk=false
- - zookeeper.server.connection=zookeeper:2181
- - security.manager.class=org.apache.airavata.service.security.KeyCloakSecurityManager
- - TLS.enabled=true
- - TLS.client.timeout=10000
- - keystore.path=/opt/keystores/airavata.p12
- - keystore.password=airavata
- - authz.cache.enabled=true
- - authz.cache.manager.class=org.apache.airavata.service.security.authzcache.DefaultAuthzCacheManager
- - in.memory.cache.size=1000
- - profile.service.server.host=0.0.0.0
- - profile.service.server.port=8962
- - profile_service.class=org.apache.airavata.service.profile.server.ProfileServiceServer
- - profile.service.jdbc.url=jdbc:mariadb://db:3306/profile_service
- - profile.service.jdbc.user=root
- - profile.service.jdbc.password=123456
- - profile.service.jdbc.driver=org.mariadb.jdbc.Driver
- - profile.service.validationQuery=SELECT 1
- - iam.server.url=https://airavata.host:8443
- - iam.server.super.admin.username=admin
- - iam.server.super.admin.password=admin
- - db_event_manager.class=org.apache.airavata.db.event.manager.DBEventManagerRunner
- - thrift.client.pool.abandoned.removal.enabled=true
- command: ["/tmp/wait-for-it.sh", "db:3306", "--", "/tmp/wait-for-it.sh", "rabbitmq:5672", "--" , "/opt/apache-airavata-api-server/bin/airavata-server-start.sh", "api-orch"]
-
- prewm:
- image: airavata/pre-wm
- restart: always
- depends_on:
- - zookeeper
- - db
- - kafka
- - keycloak
- - apiserver
- - rabbitmq
- environment:
- - zookeeper.server.connection=zookeeper:2181
- - regserver.server.host=apiserver
- - rabbitmq.broker.url=amqp://guest:guest@rabbitmq:5672/develop
- - pre.workflow.manager.loadbalance.clusters=false
- command: ["/tmp/wait-for-it.sh", "zookeeper:2181", "--", "/tmp/wait-for-it.sh", "apiserver:8970", "--" , "/tmp/wait-for-it.sh", "rabbitmq:5672", "--", "/opt/apache-airavata-pre-wm/bin/pre-wm.sh"]
-
- participant:
- image: airavata/participant
- restart: always
- depends_on:
- - zookeeper
- - db
- - kafka
- - keycloak
- - apiserver
- - rabbitmq
- environment:
- - zookeeper.server.connection=zookeeper:2181
- - regserver.server.host=apiserver
- - rabbitmq.broker.url=amqp://guest:guest@rabbitmq:5672/develop
- - credential.store.server.host=apiserver
- - email.based.monitor.address=CHANGEME
- - enable.realtime.monitor=false
- - profile.service.server.host=apiserver
- - profile.service.server.port=8962
- command: ["/tmp/wait-for-it.sh", "zookeeper:2181", "--", "/tmp/wait-for-it.sh", "apiserver:8970", "--" , "/tmp/wait-for-it.sh", "rabbitmq:5672", "--", "/opt/apache-airavata-participant/bin/participant.sh"]
-
- emailmonitor:
- image: airavata/email-monitor
- restart: always
- depends_on:
- - zookeeper
- - db
- - kafka
- - keycloak
- - apiserver
- - rabbitmq
- environment:
- - zookeeper.server.connection=zookeeper:2181
- - regserver.server.host=apiserver
- - regserver.server.port=8970
- - email.based.monitor.address=CHANGEME
- - email.based.monitor.password=CHANGEME
- - kafka.broker.url=kafka:9092
- command: ["/tmp/wait-for-it.sh", "zookeeper:2181", "--", "/tmp/wait-for-it.sh", "apiserver:8970", "--" , "/tmp/wait-for-it.sh", "kafka:9092", "--", "/opt/apache-airavata-email-monitor/bin/email-monitor.sh"]
-
- db:
- image: mariadb:10.4.13
- environment:
- MYSQL_ROOT_PASSWORD: 123456
- ports:
- - "3306:3306"
- volumes:
- - mariadb_data:/var/lib/mysql
-
- keycloak:
- image: keycloak/keycloak:24.0
- environment:
- KEYCLOAK_ADMIN: admin
- KEYCLOAK_ADMIN_PASSWORD: admin
- command: ["start-dev", "--https-port=8443"]
- ports:
- - "8443:8443"
- - "18080:8080"
-
- rabbitmq:
- image: rabbitmq:3.12.14-management
- ports:
- - "5672:5672"
- - "15672:15672"
- environment:
- - RABBITMQ_DEFAULT_USER=guest
- - RABBITMQ_DEFAULT_PASS=guest
- command: >
- bash -c "
- rabbitmq-server &
- until rabbitmqctl status > /dev/null 2>&1; do
- echo 'Waiting for RabbitMQ to be ready...'
- sleep 2
- done
- rabbitmqctl add_vhost develop
- rabbitmqctl set_permissions -p develop guest '.*' '.*' '.*'
- wait
- "
-
- zookeeper:
- image: wurstmeister/zookeeper
- hostname: zookeeper
- ports:
- - "2181:2181"
-
- kafka:
- image: wurstmeister/kafka
- hostname: kafka
- ports:
- - "9092:9092"
- environment:
- KAFKA_ADVERTISED_HOST_NAME: kafka
- KAFKA_ZOOKEEPER_CONNECT: zookeeper:2181
-
- postwm:
- image: airavata/post-wm
- restart: always
- depends_on:
- - zookeeper
- - db
- - kafka
- - keycloak
- - apiserver
- - rabbitmq
- environment:
- - zookeeper.server.connection=zookeeper:2181
- - regserver.server.host=apiserver
- - rabbitmq.broker.url=amqp://guest:guest@rabbitmq:5672/develop
- - post.workflow.manager.loadbalance.clusters=false
- - kafka.broker.url=kafka:9092
- command: ["/tmp/wait-for-it.sh", "zookeeper:2181", "--", "/tmp/wait-for-it.sh", "apiserver:8970", "--" , "/tmp/wait-for-it.sh", "rabbitmq:5672", "--", "/tmp/wait-for-it.sh", "kafka:9092", "--", "/opt/apache-airavata-post-wm/bin/post-wm.sh"]
-
-volumes:
- mariadb_data:
diff --git a/.devcontainer/docker-compose.yml b/.devcontainer/docker-compose.yml
deleted file mode 100644
index ec91fabdf5..0000000000
--- a/.devcontainer/docker-compose.yml
+++ /dev/null
@@ -1,263 +0,0 @@
-networks:
- airavata-network:
- driver: bridge
- name: airavata.host
- ipam:
- config:
- - subnet: 192.168.100.0/24
- gateway: 192.168.100.1
-
-volumes:
- db_data:
- driver: local
-
-services:
- devcontainer:
- profiles:
- - development
- build:
- dockerfile: Dockerfile
- target: deps
- container_name: devcontainer
- restart: always
- volumes:
- - ..:/home/developer/workspace:cached
- - $HOME/.m2:/home/developer/.m2
- - $HOME/.ssh:/home/developer/.ssh
- networks:
- airavata-network:
- ipv4_address: 192.168.100.9
- extra_hosts:
- - "airavata.host:192.168.100.1"
- ports:
- - "7878:7878" # sharing registry service
- - "8000:8000" # tunnel service
- - "17000:17000" # tunnel service (ingress)
- - "8050:8050" # file service
- - "8082:8082" # rest proxy
- - "8930:8930" # api service
- - "8960:8960" # cred store service
- - "8962:8962" # profile service
- - "8970:8970" # registry service
- - "18800:18800" # agent service (http)
- - "19900:19900" # agent service (gRPC)
- - "18889:18889" # research service (http)
- - "19908:19908" # research service (gRPC)
- command: sleep infinity
-
- microservices:
- profiles:
- - staging
- build:
- dockerfile: Dockerfile
- target: runner
- container_name: microservices
- restart: always
- volumes:
- - ../vault:/app/vault
- networks:
- airavata-network:
- ipv4_address: 192.168.100.9
- extra_hosts:
- - "airavata.host:192.168.100.1"
- ports:
- - "7878:7878" # sharing registry service
- - "8000:8000" # tunnel service
- - "17000:17000" # tunnel service (ingress)
- - "8050:8050" # file service
- - "8930:8930" # api service
- - "8960:8960" # cred store service
- - "8962:8962" # profile service
- - "8970:8970" # registry service
- - "18800:18800" # agent service (http)
- - "19900:19900" # agent service (gRPC)
- - "18889:18889" # research service (http)
- - "19908:19908" # research service (gRPC)
- depends_on:
- - db
- - kafka
- - keycloak
- - rabbitmq
- - sshd
-
- portals:
- profiles:
- - development
- - staging
- build:
- context: portals
- dockerfile: Dockerfile
- container_name: portals
- restart: always
- volumes:
- - /tmp:/tmp
- - ./portals/pga_config.php:/var/www/html/default/config/pga_config.php
- networks:
- airavata-network:
- ipv4_address: 192.168.100.11
- extra_hosts:
- - "airavata.host:192.168.100.1"
-
- jupyterhub:
- profiles:
- - development
- - staging
- build:
- context: ../modules/research-framework/research-hub/compose
- dockerfile: Dockerfile
- container_name: jupyterhub
- restart: always
- environment:
- OAUTH_CLIENT_ID: "cs-jupyterlab"
- OAUTH_CLIENT_SECRET: "DxeMtfiWU1qkDEmaGHf13RDahCujzhy1"
- JUPYTERHUB_CRYPT_KEY: "a99323294a5d6f9b1d0e7e33450dff44db664264231b985e069c6eba8f9a3e09"
- DOCKER_NETWORK_NAME: jupyterhub_network
- DOCKER_NOTEBOOK_IMAGE: cybershuttle/dev_jupyterlab-base
- volumes:
- - ../modules/research-framework/research-hub/compose/jupyterhub_config.py:/srv/jupyterhub/jupyterhub_config.py
- - /var/run/docker.sock:/var/run/docker.sock
- networks:
- airavata-network:
- ipv4_address: 192.168.100.12
- extra_hosts:
- - "airavata.host:192.168.100.1"
-
- proxy:
- image: nginx:stable
- container_name: proxy
- restart: always
- volumes:
- - ../vault.local/server.key:/vault/server.key:ro
- - ../vault.local/server.crt:/vault/server.crt:ro
- - ./proxy/nginx.conf:/etc/nginx/nginx.conf:ro
- - ./proxy/http.conf:/etc/nginx/conf.d/http.conf:ro
- - ./proxy/stream.conf:/etc/nginx/conf.d/stream.conf:ro
- networks:
- airavata-network:
- ipv4_address: 192.168.100.13
- extra_hosts:
- - "airavata.host:192.168.100.1"
- ports:
- - "5173:5173" # tls + research portal
- - "8008:8008" # tls + php portal
- - "8009:8009" # tls + django portal
- - "8443:8443" # tls + keycloak
- - "9930:9930" # tls + api
- - "20000:20000" # tls + jupyterhub
-
- keycloak:
- image: keycloak/keycloak:25.0
- container_name: keycloak
- restart: always
- environment:
- KEYCLOAK_ADMIN: admin
- KEYCLOAK_ADMIN_PASSWORD: admin
- volumes:
- - ./keycloak/realm-default.json:/opt/keycloak/data/import/realm-default.json
- - ./keycloak/keycloak.conf:/opt/keycloak/conf/keycloak.conf
- command: [ "start", "--import-realm" ]
- networks:
- airavata-network:
- ipv4_address: 192.168.100.14
- extra_hosts:
- - "airavata.host:192.168.100.1"
- ports:
- - "18080:18080"
-
- db:
- image: mariadb:10.4.13
- container_name: db
- restart: always
- environment:
- MYSQL_ROOT_PASSWORD: 123456
- MYSQL_USER: airavata
- MYSQL_PASSWORD: 123456
- volumes:
- - ./database_scripts/init:/docker-entrypoint-initdb.d
- - db_data:/var/lib/mysql
- command:
- [
- "mysqld",
- "--character-set-server=utf8mb4",
- "--collation-server=utf8mb4_unicode_ci",
- "--sql-mode=NO_ENGINE_SUBSTITUTION",
- ]
- networks:
- airavata-network:
- ipv4_address: 192.168.100.15
- extra_hosts:
- - "airavata.host:192.168.100.1"
- ports:
- - "13306:3306"
-
- rabbitmq:
- image: rabbitmq:4.0-management
- container_name: rabbitmq
- restart: always
- environment:
- RABBITMQ_DEFAULT_VHOST: develop
- networks:
- airavata-network:
- ipv4_address: 192.168.100.16
- extra_hosts:
- - "airavata.host:192.168.100.1"
- ports:
- - "5672:5672"
- - "15672:15672"
-
- zookeeper:
- image: zookeeper:latest
- container_name: zookeeper
- restart: always
- networks:
- airavata-network:
- ipv4_address: 192.168.100.17
- extra_hosts:
- - "airavata.host:192.168.100.1"
- ports:
- - "2181:2181"
-
- kafka:
- image: wurstmeister/kafka:latest
- container_name: kafka
- restart: always
- environment:
- KAFKA_ADVERTISED_HOST_NAME: airavata.host
- KAFKA_ZOOKEEPER_CONNECT: zookeeper:2181
- networks:
- airavata-network:
- ipv4_address: 192.168.100.18
- extra_hosts:
- - "airavata.host:192.168.100.1"
- ports:
- - "9092:9092"
- depends_on:
- - zookeeper
-
- sshd:
- image: panubo/sshd
- container_name: sshd
- restart: always
- volumes:
- - /tmp:/tmp
- networks:
- airavata-network:
- ipv4_address: 192.168.100.20
- extra_hosts:
- - "airavata.host:192.168.100.1"
- ports:
- - "22222:22"
-
- adminer:
- image: adminer:latest
- container_name: adminer
- restart: always
- networks:
- airavata-network:
- ipv4_address: 192.168.100.21
- extra_hosts:
- - "airavata.host:192.168.100.1"
- ports:
- - "18088:8080"
- depends_on:
- - db
diff --git a/.devcontainer/gateway-storage/Dockerfile b/.devcontainer/gateway-storage/Dockerfile
deleted file mode 100644
index 4e1ddb220a..0000000000
--- a/.devcontainer/gateway-storage/Dockerfile
+++ /dev/null
@@ -1,22 +0,0 @@
-FROM ubuntu:16.04
-
-RUN apt-get update && apt-get install -y openssh-server
-RUN mkdir /var/run/sshd
-RUN echo 'root:root' | chpasswd
-RUN sed -i 's/PermitRootLogin prohibit-password/PermitRootLogin yes/' /etc/ssh/sshd_config
-
-# SSH login fix. Otherwise user is kicked off after login
-RUN sed 's@session\s*required\s*pam_loginuid.so@session optional pam_loginuid.so@g' -i /etc/pam.d/sshd
-
-ENV NOTVISIBLE "in users profile"
-RUN echo "export VISIBLE=now" >> /etc/profile
-
-RUN mkdir -p /var/www/portals/gateway-user-data
-RUN mkdir /root/.ssh
-ADD authorized_keys /root/.ssh/authorized_keys
-
-RUN chmod 700 /root/.ssh
-RUN chmod 644 /root/.ssh/authorized_keys
-
-EXPOSE 22
-CMD ["/usr/sbin/sshd", "-D"]
\ No newline at end of file
diff --git a/.devcontainer/gateway-storage/authorized_keys b/.devcontainer/gateway-storage/authorized_keys
deleted file mode 100644
index de688215ec..0000000000
--- a/.devcontainer/gateway-storage/authorized_keys
+++ /dev/null
@@ -1 +0,0 @@
-ssh-rsa AAAAB3NzaC1yc2EAAAADAQABAAABAQCr0zWkrd3MJe397xm1q7EBZd7HuIcgLva0Dl3uyE3N7vqcWeXjXngtVicJLIROIASwy1+MAbhDDQLykQtIcJTJ5cvZM29nqqsIZ9l0acURVtDVnMd7PqRs+0wBQnrdZm34NT3/QJhxZTOuSn+i44VPFM1HWFObDP7GGtRMheGAKKV2tTbF1o/q1XaBiQJABOsP/Yt20nox1Hd6OCl0E3loK0sA+DnVVK9Ox0WShr4CWOLUCWavghXbgbDQPe/3VMSvwYqvLjNd+VfrNiAx7jNm+nxVKQSzYJ46RSwVs4jLKrnrG85+eAFwLeIFjlLyrsVNvBlOCs6XQ6lmVDD1u97B
\ No newline at end of file
diff --git a/.devcontainer/portals/Dockerfile b/.devcontainer/portals/Dockerfile
deleted file mode 100644
index 94a9de0b06..0000000000
--- a/.devcontainer/portals/Dockerfile
+++ /dev/null
@@ -1,33 +0,0 @@
-FROM php:8.1-apache
-
-# TODO put all 3 portals -- research portal (:5173), php gateway (:8008), and django portal (:8009)
-# TODO handle ssl termination before requests hit this container
-
-ARG PORTALS_REPO_URL=https://github.com/apache/airavata-portals/archive/refs/heads/main.tar.gz
-
-# set hostname
-RUN echo "ServerName airavata.host" >> /etc/apache2/apache2.conf
-
-# install deps
-RUN apt-get update && apt-get install -y wget git unzip && rm -rf /var/lib/apt/lists/*
-RUN wget -qO- https://getcomposer.org/installer | php -- --install-dir=/usr/local/bin --filename=composer
-
-# setup site config
-COPY pga-default.conf /etc/apache2/sites-available/000-default.conf
-
-RUN a2enmod rewrite && a2ensite 000-default.conf && apache2ctl configtest
-
-USER www-data:www-data
-
-WORKDIR /var/www/html/default
-
-# ensure config directory exists for mounting
-RUN mkdir -p config storage/views storage/sessions bootstrap/cache
-
-RUN wget -qO- $PORTALS_REPO_URL | tar xz --strip-components=2 -C . airavata-portals-main/airavata-php-gateway
-
-COPY pga_config.php /var/www/html/default/config/pga_config.php
-
-RUN composer install --no-dev --optimize-autoloader
-
-EXPOSE 5173 8008 8009
diff --git a/.devcontainer/portals/pga-default.conf b/.devcontainer/portals/pga-default.conf
deleted file mode 100644
index e3b250eac4..0000000000
--- a/.devcontainer/portals/pga-default.conf
+++ /dev/null
@@ -1,10 +0,0 @@
-<VirtualHost *:8008>
-
- DocumentRoot /var/www/html/default/public
- <Directory "/var/www/html/default/public">
- AllowOverride All
- </Directory>
- ErrorLog /var/log/apache2/default.error.log
- CustomLog /var/log/apache2/default.requests.log combined
-
-</VirtualHost>
\ No newline at end of file
diff --git a/.devcontainer/portals/pga_config.php b/.devcontainer/portals/pga_config.php
deleted file mode 100644
index 80fb112cec..0000000000
--- a/.devcontainer/portals/pga_config.php
+++ /dev/null
@@ -1,324 +0,0 @@
-<?php
-return array(
- /**
- * *****************************************************************
- * WSO2 Identity Server Related Configurations
- * *****************************************************************
- */
-
- 'wsis' => [
-
- /**
- * Admin Role Name
- */
- 'admin-role-name' => 'Internal/everyone',
-
- /**
- * Read only Admin Role Name
- */
- 'read-only-admin-role-name' => 'Internal/everyone',
-
- /**
- * Gateway user role
- */
- 'user-role-name' => 'Internal/everyone',
-
- /**
- * Initial user role. This is the initial user role assigned to a new
- * user. Set this to one of the three roles above to automatically
- * grant new users that role, or set to some other role ('user-pending')
- * to require admin approval before users have access.
- */
- 'initial-role-name' => 'user-pending',
-
- /**
- * Tenant Domain
- */
- 'tenant-domain' => 'default',
-
- /**
- * Tenant admin's username
- */
- 'admin-username' => 'default-admin',
-
- /**
- * Tenant admin's password
- */
- 'admin-password' => 'ade4#21242ftfd',
-
- /**
- * OAuth client key
- */
- 'oauth-client-key' => 'pga',
-
- /**
- * OAuth client secret
- */
- 'oauth-client-secret' => 'upCMVu2RZcAXUqpr9V7phAbz6hhF9cbl',
-
- /**
- * Authentication options
- */
- 'auth-options' => [
- // Example of password based login
- [
- 'oauth-grant-type' => 'password',
- 'name' => 'Airavata PHP Gateway',
- ],
- // Example of external identity provider login
- [
- 'oauth-grant-type' => 'authorization_code',
- 'name' => 'CILogon',
- // Optional
- // Note: kc_idp_hint is used to skip Keycloak login screen and redirect immediately to this identity provider
- // http://www.keycloak.org/docs/2.5/server_admin/topics/identity-broker/suggested.html
- 'oauth-authorize-url-extra-params' => 'kc_idp_hint=oidc',
- // Optional
- 'logo' => '/assets/path_to_image.png'
- ],
- ],
-
- /**
- * OAuth Grant Type (password or authorization_code)
- */
- 'oauth-grant-type' => 'authorization_code',
-
- /**
- * OAuth call back url (only if the grant type is authorization_code)
- */
- 'oauth-callback-url' => 'http://localhost:8000/callback-url',
-
- /**
- * For OIDC servers that support the discovery protocol.
- */
- 'openid-connect-discovery-url' => 'http://airavata.host:18080/realms/default/.well-known/openid-configuration',
-
- /**
- * Identity server url
- */
- 'service-url' => 'http://airavata.host:18080',
-
- /**
- * Enable HTTPS server verification
- */
- 'verify-peer' => false,
-
- /**
- * Path to the server certificate file
- */
- 'cafile-path' => app_path() . '/resources/security/incommon_rsa_server_ca.pem',
- ],
-
-
- /**
- * *****************************************************************
- * Airavata Client Configurations
- * *****************************************************************
- */
- 'airavata' => [
-
- /**
- * Airavata API server location. Use tls:// as the protocol to
- * connect TLS enabled Airavata
- */
- 'airavata-server' => 'airavata.host',
-
- /**
- * Airavata API server port
- */
- 'airavata-port' => '8930',
-
- /**
- * Airavata Profile Service server location. Use tls:// as the protocol to
- * connect over TLS
- */
- 'airavata-profile-service-server' => 'airavata.host',
-
- /**
- * Airavata Profile Service port
- */
- 'airavata-profile-service-port' => '8962',
-
- /**
- * Airavata API server thrift communication timeout
- */
- 'airavata-timeout' => '1000000',
-
- /**
- * PGA Gateway ID
- */
- 'gateway-id' => 'default',
-
- /**
- * absolute path of the data dir
- */
- 'experiment-data-absolute-path' => '/var/www/experimentData',
-
- /**
- * Advanced experiments options
- */
- 'advanced-experiment-options' => '',
-
- /**
- * Default queue name
- */
- 'queue-name' => 'long',
-
- /**
- * Default node count
- */
- 'node-count' => '1',
-
- /**
- * Default total core count
- */
- 'total-cpu-count' => '16',
-
- /**
- * Default wall time limit
- */
- 'wall-time-limit' => '30',
-
- /**
- * Max node count
- */
- 'max-node-count' => '4',
-
- /**
- * Max total core count
- */
- 'max-total-cpu-count' => '96',
-
- /**
- * Max wall time limit
- */
- 'max-wall-time-limit' => '120',
-
- /**
- * Enable app-catalog cache
- */
- 'enable-app-catalog-cache' => true,
-
- /**
- * Life time of app catalog data cache in minutes
- */
- 'app-catalog-cache-duration' => 5,
-
- /**
- * Gateway data store resource id
- */
- 'gateway-data-store-resource-id' => '',
-
- /**
- * Data Sharing enabled
- */
- 'data-sharing-enabled' => false,
-
- /**
- * Group Resource Profile ID to use when submitting experiments
- */
- 'group-resource-profile-id' => '',
- ],
-
- /**
- * *****************************************************************
- * Portal Related Configurations
- * *****************************************************************
- */
- 'portal' => [
- /**
- * Whether this portal is the SciGaP admin portal
- */
- 'super-admin-portal' => true,
-
- /**
- * Set the name of theme in use here
- */
- 'theme' => 'base',
-
- /**
- * Portal title
- */
- 'portal-title' => 'Airavata PHP Gateway',
-
- /**
- * Email address of the portal admin. Portal admin well get email notifications for events
- * such as new user creation
- */
- 'admin-emails' => ['xxx@xxx.com','yyy@yyy.com'],
-
- /**
- * Email account that the portal should login to send emails
- */
- 'portal-email-username' => 'xyz@abc.com',
-
- /**
- * Password for the portal's email account
- */
- 'portal-email-password' => 'xxxxxxxxxxx',
-
- /**
- * SMTP server on which the portal should connect
- */
- 'portal-smtp-server-host' => 'smtp.gmail.com',
-
- /**
- * SMTP server port on which the portal should connect
- */
- 'portal-smtp-server-port' => '587',
-
- /**
- * Email verification code valid time interval in minutes
- */
- 'email-verify-code-valid-time' => 360,
-
- /**
- * Set this to true if theme has set links to login
- */
- 'theme-based-login-links-configured' => false,
-
- /**
- * Set the URL of the new Django portal for re-routing
- */
- 'airavata-django-url' => "http://airavata.host:8009/",
-
- /**
- * Set to true to enable reroute to the new Django portal
- */
- 'reroute-to-django' => true,
-
- /**
- * Set JIRA Issue Collector scripts here.
- */
- 'jira-help' =>
- [
- /**
- * Report Issue Script issued for your app by Atlassian JIRA
- */
- 'report-issue-script' => '',
- /**
- * Collector id at the end of the above script
- */
- 'report-issue-collector-id' => '',
- /**
- * Create Report Script issued for your app by Atlassian JIRA
- */
- 'request-feature-script' => '',
- /**
- * Collector id at the end of the above script
- */
- 'request-feature-collector-id' => ''
- ],
-
- /**
- * Set Google Analytics Id here. ID format that generates from
- * creating tracker object should be
- *
- * UA-XXXXX-Y
- *
- * for it to be working correctly. Currently it is only set for
- * sending pageviews.
- */
- 'google-analytics-id' => ''
- ]
-);
diff --git a/.devcontainer/proxy/http.conf b/.devcontainer/proxy/http.conf
deleted file mode 100644
index 19ebd0c9c5..0000000000
--- a/.devcontainer/proxy/http.conf
+++ /dev/null
@@ -1,104 +0,0 @@
-# research portal (5173)
-server {
- listen 5173 ssl;
- if ($scheme != "https") {
- return 301 https://$host$request_uri;
- }
- http2 on;
- server_name airavata.host;
- ssl_certificate /vault/server.crt;
- ssl_certificate_key /vault/server.key;
- location / {
- proxy_pass http://portals:5173;
- proxy_set_header Host $host;
- proxy_set_header X-Real-IP $remote_addr;
- proxy_set_header X-Forwarded-For $proxy_add_x_forwarded_for;
- proxy_set_header X-Forwarded-Proto $scheme;
- proxy_set_header X-Forwarded-Port $server_port;
- proxy_redirect default;
- }
-}
-
-# php portal (8008)
-server {
- listen 8008 ssl;
- if ($scheme != "https") {
- return 301 https://$host$request_uri;
- }
- http2 on;
- server_name airavata.host;
- ssl_certificate /vault/server.crt;
- ssl_certificate_key /vault/server.key;
- location / {
- proxy_pass http://portals:8008;
- proxy_set_header Host $host;
- proxy_set_header X-Real-IP $remote_addr;
- proxy_set_header X-Forwarded-For $proxy_add_x_forwarded_for;
- proxy_set_header X-Forwarded-Proto $scheme;
- proxy_set_header X-Forwarded-Port $server_port;
- proxy_redirect default;
- }
-}
-
-# django portal (8009)
-server {
- listen 8009 ssl;
- if ($scheme != "https") {
- return 301 https://$host$request_uri;
- }
- http2 on;
- server_name airavata.host;
- ssl_certificate /vault/server.crt;
- ssl_certificate_key /vault/server.key;
- location / {
- proxy_pass http://portals:8009;
- proxy_set_header Host $host;
- proxy_set_header X-Real-IP $remote_addr;
- proxy_set_header X-Forwarded-For $proxy_add_x_forwarded_for;
- proxy_set_header X-Forwarded-Proto $scheme;
- proxy_set_header X-Forwarded-Port $server_port;
- proxy_redirect default;
- }
-}
-
-# keycloak (8443)
-server {
- listen 8443 ssl;
- if ($scheme != "https") {
- return 301 https://$host$request_uri;
- }
- http2 on;
- server_name airavata.host;
- ssl_certificate /vault/server.crt;
- ssl_certificate_key /vault/server.key;
- location / {
- proxy_pass http://keycloak:18080;
- proxy_set_header Host $host;
- proxy_set_header X-Real-IP $remote_addr;
- proxy_set_header X-Forwarded-For $proxy_add_x_forwarded_for;
- proxy_set_header X-Forwarded-Proto $scheme;
- proxy_set_header X-Forwarded-Port $server_port;
- proxy_redirect default;
- }
-}
-
-# jupyterhub (20000)
-server {
- listen 20000 ssl;
- if ($scheme != "https") {
- return 301 https://$host$request_uri;
- }
- http2 on;
- server_name airavata.host;
- ssl_certificate /vault/server.crt;
- ssl_certificate_key /vault/server.key;
- location / {
- proxy_pass http://jupyterhub:20000;
- proxy_set_header Host $host;
- proxy_set_header X-Real-IP $remote_addr;
- proxy_set_header X-Forwarded-For $proxy_add_x_forwarded_for;
- proxy_set_header X-Forwarded-Proto $scheme;
- proxy_set_header X-Forwarded-Port $server_port;
- proxy_redirect default;
- }
-}
diff --git a/.devcontainer/proxy/nginx.conf b/.devcontainer/proxy/nginx.conf
deleted file mode 100644
index b9536d0aaa..0000000000
--- a/.devcontainer/proxy/nginx.conf
+++ /dev/null
@@ -1,15 +0,0 @@
-worker_processes auto;
-error_log /var/log/nginx/error.log warn;
-pid /var/run/nginx.pid;
-
-events {
- worker_connections 1024;
-}
-
-http {
- include /etc/nginx/conf.d/http.conf;
-}
-
-stream {
- include /etc/nginx/conf.d/stream.conf;
-}
\ No newline at end of file
diff --git a/.devcontainer/proxy/stream.conf b/.devcontainer/proxy/stream.conf
deleted file mode 100644
index 782fbfc51d..0000000000
--- a/.devcontainer/proxy/stream.conf
+++ /dev/null
@@ -1,18 +0,0 @@
-# Thrift server (9930 -> 8930)
-server {
- listen 9930 ssl; # accept TLS on port 9930
- proxy_pass 192.168.100.9:8930; # forward decrypted traffic
-
- # point to your cert+key
- ssl_certificate /vault/server.crt;
- ssl_certificate_key /vault/server.key;
-
- # (optional) enforce modern TLS only
- ssl_protocols TLSv1.2 TLSv1.3;
- ssl_ciphers HIGH:!aNULL:!MD5;
- ssl_prefer_server_ciphers on;
-
- # tuning
- proxy_connect_timeout 5s;
- proxy_timeout 5s;
-}
diff --git a/airavata-api/modules/distribution/src/main/resources/conf/db/README.md b/airavata-api/modules/distribution/src/main/resources/conf/db/README.md
new file mode 100644
index 0000000000..c6219cfe1c
--- /dev/null
+++ b/airavata-api/modules/distribution/src/main/resources/conf/db/README.md
@@ -0,0 +1,40 @@
+# Database Setup
+
+## Automated Deployments
+
+For docker-compose, Ansible, and Kubernetes, the canonical init script is
+`conf/init-db/01-create-databases.sql` at the repo root. It creates the
+`airavata` database with dev credentials.
+
+## Manual Setup
+
+1. **Create databases and users** (run as MySQL/MariaDB admin):
+ ```bash
+ mysql -u root -p < create-database.sql
+ ```
+ Edit `create-database.sql` to set passwords before running.
+
+2. **Configure connection** in `application.properties`:
+ ```properties
+ spring.datasource.url=jdbc:mariadb://localhost:3306/airavata
+ spring.datasource.username=airavata
+ spring.datasource.password=YOUR_PASSWORD
+ ```
+
+3. **Run migrations**: Flyway runs automatically on first startup, or run:
+ ```bash
+ airavata init
+ ```
+
+## Files
+
+| File | Purpose |
+|------|---------|
+| `create-database.sql` | Manual/reference setup (creates airavata DB) |
+| `migration/airavata/V1__Baseline_schema.sql` | Flyway baseline migration (all tables) |
+| `conf/init-db/01-create-databases.sql` (repo root) | Canonical init for automated deployments |
+
+## Requirements
+
+- MySQL 5.7+ or MariaDB 10.2+
+- UTF-8 (utf8mb4) supported
diff --git a/modules/registry-db-migrator/src/main/resources/db-scripts/0.7/migrate_mysql.sql b/airavata-api/modules/distribution/src/main/resources/conf/db/create-database.sql
similarity index 53%
rename from modules/registry-db-migrator/src/main/resources/db-scripts/0.7/migrate_mysql.sql
rename to airavata-api/modules/distribution/src/main/resources/conf/db/create-database.sql
index 6b47ed55aa..08b38b098a 100644
--- a/modules/registry-db-migrator/src/main/resources/db-scripts/0.7/migrate_mysql.sql
+++ b/airavata-api/modules/distribution/src/main/resources/conf/db/create-database.sql
@@ -1,5 +1,4 @@
/*
- *
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
@@ -17,24 +16,25 @@
* specific language governing permissions and limitations
* under the License.
*
+ * Apache Airavata - Database Setup Script (manual / reference)
+ *
+ * For automated deployments (docker-compose, Ansible, K8s), use the canonical
+ * init script at: conf/init-db/01-create-databases.sql
+ *
+ * This file is for manual one-off setup. Run as a MySQL/MariaDB admin before
+ * first deployment. Replace credentials with values for your environment.
+ *
+ * Prerequisites: MySQL 5.7+ or MariaDB 10.2+
+ *
+ * Usage: mysql -u root -p < create-database.sql
*/
-CREATE TABLE community_user
-(
- GATEWAY_NAME VARCHAR(256) NOT NULL,
- COMMUNITY_USER_NAME VARCHAR(256) NOT NULL,
- TOKEN_ID VARCHAR(256) NOT NULL,
- COMMUNITY_USER_EMAIL VARCHAR(256) NOT NULL,
- PRIMARY KEY (GATEWAY_NAME, COMMUNITY_USER_NAME, TOKEN_ID)
-);
+-- Airavata database
+CREATE DATABASE IF NOT EXISTS airavata
+ CHARACTER SET utf8mb4
+ COLLATE utf8mb4_unicode_ci;
+CREATE USER IF NOT EXISTS 'airavata'@'%' IDENTIFIED BY 'CHANGE_ME_IN_PRODUCTION';
+GRANT ALL PRIVILEGES ON airavata.* TO 'airavata'@'%';
-CREATE TABLE credentials
-(
- GATEWAY_ID VARCHAR(256) NOT NULL,
- TOKEN_ID VARCHAR(256) NOT NULL,
- CREDENTIAL TEXT NOT NULL,
- PORTAL_USER_ID VARCHAR(256) NOT NULL,
- TIME_PERSISTED TIMESTAMP DEFAULT '0000-00-00 00:00:00',
- PRIMARY KEY (GATEWAY_ID, TOKEN_ID)
-);
\ No newline at end of file
+FLUSH PRIVILEGES;
diff --git a/airavata-api/modules/distribution/src/main/resources/conf/db/migration/airavata/V1__Baseline_schema.sql b/airavata-api/modules/distribution/src/main/resources/conf/db/migration/airavata/V1__Baseline_schema.sql
new file mode 100644
index 0000000000..9f67523322
--- /dev/null
+++ b/airavata-api/modules/distribution/src/main/resources/conf/db/migration/airavata/V1__Baseline_schema.sql
@@ -0,0 +1,1720 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements. See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership. The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied. See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ *
+ * Apache Airavata - Unified Database Schema (V1 Baseline)
+ *
+ * Generated from JPA @Entity annotations in the codebase.
+ * All persistence units share a single 'airavata' database.
+ *
+ * Requires: MariaDB 10.2+ or MySQL 5.7+
+ */
+
+-- ============================================================================
+-- 1. EXPERIMENT CATALOG
+-- ============================================================================
+
+CREATE TABLE IF NOT EXISTS GATEWAY (
+ GATEWAY_ID VARCHAR(255) NOT NULL,
+ GATEWAY_NAME VARCHAR(255),
+ DOMAIN VARCHAR(255),
+ EMAIL_ADDRESS VARCHAR(255),
+ GATEWAY_APPROVAL_STATUS VARCHAR(255),
+ GATEWAY_ACRONYM VARCHAR(255),
+ GATEWAY_URL VARCHAR(255),
+ GATEWAY_PUBLIC_ABSTRACT VARCHAR(255),
+ GATEWAY_REVIEW_PROPOSAL_DESCRIPTION VARCHAR(255),
+ GATEWAY_ADMIN_FIRST_NAME VARCHAR(255),
+ GATEWAY_ADMIN_LAST_NAME VARCHAR(255),
+ GATEWAY_ADMIN_EMAIL VARCHAR(255),
+ IDENTITY_SERVER_USERNAME VARCHAR(255),
+ IDENTITY_SERVER_PASSWORD_TOKEN VARCHAR(255),
+ DECLINED_REASON VARCHAR(255),
+ OAUTH_CLIENT_ID VARCHAR(255),
+ OAUTH_CLIENT_SECRET VARCHAR(255),
+ REQUEST_CREATION_TIME TIMESTAMP NULL,
+ REQUESTER_USERNAME VARCHAR(255),
+ PRIMARY KEY (GATEWAY_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS USERS (
+ USER_NAME VARCHAR(255) NOT NULL,
+ GATEWAY_ID VARCHAR(255) NOT NULL,
+ AIRAVATA_INTERNAL_USER_ID VARCHAR(255),
+ PASSWORD VARCHAR(255),
+ PRIMARY KEY (USER_NAME, GATEWAY_ID),
+ CONSTRAINT FK_USERS_GATEWAY FOREIGN KEY (GATEWAY_ID) REFERENCES GATEWAY (GATEWAY_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS GATEWAY_WORKER (
+ GATEWAY_ID VARCHAR(255) NOT NULL,
+ USER_NAME VARCHAR(255) NOT NULL,
+ PRIMARY KEY (GATEWAY_ID, USER_NAME)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS GATEWAY_USAGE_REPORTING_COMMAND (
+ GATEWAY_ID VARCHAR(255) NOT NULL,
+ COMPUTE_RESOURCE_ID VARCHAR(255) NOT NULL,
+ COMMAND LONGTEXT,
+ PRIMARY KEY (GATEWAY_ID, COMPUTE_RESOURCE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS NOTIFICATION (
+ NOTIFICATION_ID VARCHAR(255) NOT NULL,
+ GATEWAY_ID VARCHAR(255),
+ TITLE VARCHAR(255),
+ NOTIFICATION_MESSAGE VARCHAR(4096),
+ CREATION_DATE TIMESTAMP NULL,
+ PUBLISHED_DATE TIMESTAMP NULL,
+ EXPIRATION_DATE TIMESTAMP NULL,
+ PRIORITY VARCHAR(255),
+ PRIMARY KEY (NOTIFICATION_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS PROJECT (
+ PROJECT_ID VARCHAR(255) NOT NULL,
+ USER_NAME VARCHAR(255),
+ GATEWAY_ID VARCHAR(255),
+ PROJECT_NAME VARCHAR(255),
+ DESCRIPTION VARCHAR(255),
+ CREATION_TIME TIMESTAMP NULL,
+ PRIMARY KEY (PROJECT_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS PROJECT_USER (
+ PROJECT_ID VARCHAR(255) NOT NULL,
+ USER_NAME VARCHAR(255) NOT NULL,
+ PRIMARY KEY (PROJECT_ID, USER_NAME),
+ CONSTRAINT FK_PROJECT_USER_USER FOREIGN KEY (USER_NAME) REFERENCES USERS (USER_NAME)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS QUEUE_STATUS (
+ HOST_NAME VARCHAR(255) NOT NULL,
+ QUEUE_NAME VARCHAR(255) NOT NULL,
+ CREATED_TIME BIGINT NOT NULL,
+ QUEUE_UP TINYINT(1) NOT NULL DEFAULT 0,
+ RUNNING_JOBS TINYINT(1) NOT NULL DEFAULT 0,
+ QUEUED_JOBS INT NOT NULL DEFAULT 0,
+ PRIMARY KEY (HOST_NAME, QUEUE_NAME, CREATED_TIME)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS EXPERIMENT (
+ EXPERIMENT_ID VARCHAR(255) NOT NULL,
+ PROJECT_ID VARCHAR(255),
+ GATEWAY_ID VARCHAR(255),
+ EXPERIMENT_TYPE VARCHAR(255),
+ CLEANUP_STRATEGY VARCHAR(255),
+ USER_NAME VARCHAR(255),
+ EXPERIMENT_NAME VARCHAR(255),
+ CREATION_TIME TIMESTAMP NULL,
+ DESCRIPTION VARCHAR(255),
+ EXECUTION_ID VARCHAR(255),
+ GATEWAY_EXECUTION_ID VARCHAR(255),
+ GATEWAY_INSTANCE_ID VARCHAR(255),
+ ENABLE_EMAIL_NOTIFICATION TINYINT(1) NOT NULL DEFAULT 0,
+ EMAIL_ADDRESSES LONGTEXT,
+ PRIMARY KEY (EXPERIMENT_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS EXPERIMENT_SUMMARY (
+ EXPERIMENT_ID VARCHAR(255) NOT NULL,
+ PROJECT_ID VARCHAR(255),
+ GATEWAY_ID VARCHAR(255),
+ CREATION_TIME TIMESTAMP NULL,
+ USER_NAME VARCHAR(255),
+ EXPERIMENT_NAME VARCHAR(255),
+ DESCRIPTION VARCHAR(255),
+ EXECUTION_ID VARCHAR(255),
+ STATE VARCHAR(255),
+ RESOURCE_HOST_ID VARCHAR(255),
+ TIME_OF_STATE_CHANGE TIMESTAMP NULL,
+ PRIMARY KEY (EXPERIMENT_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS EXPERIMENT_INPUT (
+ EXPERIMENT_ID VARCHAR(255) NOT NULL,
+ INPUT_NAME VARCHAR(255) NOT NULL,
+ INPUT_VALUE LONGTEXT,
+ DATA_TYPE VARCHAR(255),
+ APPLICATION_ARGUMENT VARCHAR(255),
+ STANDARD_INPUT TINYINT(1) NOT NULL DEFAULT 0,
+ USER_FRIENDLY_DESCRIPTION LONGTEXT,
+ METADATA VARCHAR(4096),
+ INPUT_ORDER INT NOT NULL DEFAULT 0,
+ IS_REQUIRED TINYINT(1) NOT NULL DEFAULT 0,
+ REQUIRED_TO_ADDED_TO_CMD TINYINT(1) NOT NULL DEFAULT 0,
+ DATA_STAGED TINYINT(1) NOT NULL DEFAULT 0,
+ STORAGE_RESOURCE_ID VARCHAR(255),
+ IS_READ_ONLY TINYINT(1) NOT NULL DEFAULT 0,
+ OVERRIDE_FILENAME VARCHAR(255),
+ PRIMARY KEY (EXPERIMENT_ID, INPUT_NAME),
+ CONSTRAINT FK_EXP_INPUT_EXPERIMENT FOREIGN KEY (EXPERIMENT_ID) REFERENCES EXPERIMENT (EXPERIMENT_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS EXPERIMENT_OUTPUT (
+ EXPERIMENT_ID VARCHAR(255) NOT NULL,
+ OUTPUT_NAME VARCHAR(255) NOT NULL,
+ OUTPUT_VALUE LONGTEXT,
+ DATA_TYPE VARCHAR(255),
+ APPLICATION_ARGUMENT VARCHAR(255),
+ IS_REQUIRED TINYINT(1) NOT NULL DEFAULT 0,
+ REQUIRED_TO_ADDED_TO_CMD TINYINT(1) NOT NULL DEFAULT 0,
+ DATA_MOVEMENT TINYINT(1) NOT NULL DEFAULT 0,
+ LOCATION VARCHAR(255),
+ SEARCH_QUERY VARCHAR(255),
+ OUTPUT_STREAMING TINYINT(1) NOT NULL DEFAULT 0,
+ STORAGE_RESOURCE_ID VARCHAR(255),
+ METADATA VARCHAR(4096),
+ PRIMARY KEY (EXPERIMENT_ID, OUTPUT_NAME),
+ CONSTRAINT FK_EXP_OUTPUT_EXPERIMENT FOREIGN KEY (EXPERIMENT_ID) REFERENCES EXPERIMENT (EXPERIMENT_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS EXPERIMENT_STATUS (
+ STATUS_ID VARCHAR(255) NOT NULL,
+ EXPERIMENT_ID VARCHAR(255) NOT NULL,
+ STATE VARCHAR(255),
+ TIME_OF_STATE_CHANGE TIMESTAMP NULL,
+ REASON LONGTEXT,
+ PRIMARY KEY (STATUS_ID, EXPERIMENT_ID),
+ CONSTRAINT FK_EXP_STATUS_EXPERIMENT FOREIGN KEY (EXPERIMENT_ID) REFERENCES EXPERIMENT (EXPERIMENT_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS EXPERIMENT_ERROR (
+ ERROR_ID VARCHAR(255) NOT NULL,
+ EXPERIMENT_ID VARCHAR(255) NOT NULL,
+ CREATION_TIME TIMESTAMP NULL,
+ ACTUAL_ERROR_MESSAGE LONGTEXT,
+ USER_FRIENDLY_MESSAGE LONGTEXT,
+ TRANSIENT_OR_PERSISTENT TINYINT(1) NOT NULL DEFAULT 0,
+ ROOT_CAUSE_ERROR_ID_LIST LONGTEXT,
+ PRIMARY KEY (ERROR_ID, EXPERIMENT_ID),
+ CONSTRAINT FK_EXP_ERROR_EXPERIMENT FOREIGN KEY (EXPERIMENT_ID) REFERENCES EXPERIMENT (EXPERIMENT_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS USER_CONFIGURATION_DATA (
+ EXPERIMENT_ID VARCHAR(255) NOT NULL,
+ AIRAVATA_AUTO_SCHEDULE TINYINT(1) NOT NULL DEFAULT 0,
+ OVERRIDE_MANUAL_SCHEDULED_PARAMS TINYINT(1) NOT NULL DEFAULT 0,
+ SHARE_EXPERIMENT_PUBLICALLY TINYINT(1) NOT NULL DEFAULT 0,
+ THROTTLE_RESOURCES TINYINT(1) NOT NULL DEFAULT 0,
+ USER_DN VARCHAR(255),
+ GENERATE_CERT TINYINT(1) NOT NULL DEFAULT 0,
+ RESOURCE_HOST_ID VARCHAR(255),
+ TOTAL_CPU_COUNT INT NOT NULL DEFAULT 0,
+ NODE_COUNT INT NOT NULL DEFAULT 0,
+ NUMBER_OF_THREADS INT NOT NULL DEFAULT 0,
+ QUEUE_NAME VARCHAR(255),
+ WALL_TIME_LIMIT INT NOT NULL DEFAULT 0,
+ TOTAL_PHYSICAL_MEMORY INT NOT NULL DEFAULT 0,
+ STATIC_WORKING_DIR VARCHAR(255),
+ OVERRIDE_LOGIN_USER_NAME VARCHAR(255),
+ OVERRIDE_SCRATCH_LOCATION VARCHAR(255),
+ OVERRIDE_ALLOCATION_PROJECT_NUMBER VARCHAR(255),
+ INPUT_STORAGE_RESOURCE_ID VARCHAR(255),
+ OUTPUT_STORAGE_RESOURCE_ID VARCHAR(255),
+ EXPERIMENT_DATA_DIR VARCHAR(512),
+ GROUP_RESOURCE_PROFILE_ID VARCHAR(255),
+ IS_USE_USER_CR_PREF TINYINT(1) NOT NULL DEFAULT 0,
+ PRIMARY KEY (EXPERIMENT_ID),
+ CONSTRAINT FK_USER_CONF_EXPERIMENT FOREIGN KEY (EXPERIMENT_ID) REFERENCES EXPERIMENT (EXPERIMENT_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS COMPUTE_RESOURCE_SCHEDULING (
+ EXPERIMENT_ID VARCHAR(255) NOT NULL,
+ RESOURCE_HOST_ID VARCHAR(255) NOT NULL,
+ QUEUE_NAME VARCHAR(255) NOT NULL,
+ TOTAL_CPU_COUNT INT NOT NULL DEFAULT 0,
+ NODE_COUNT INT NOT NULL DEFAULT 0,
+ NUMBER_OF_THREADS INT NOT NULL DEFAULT 0,
+ WALL_TIME_LIMIT INT NOT NULL DEFAULT 0,
+ PARALLEL_GROUP_COUNT INT NOT NULL DEFAULT 0,
+ TOTAL_PHYSICAL_MEMORY INT NOT NULL DEFAULT 0,
+ STATIC_WORKING_DIR VARCHAR(255),
+ OVERRIDE_LOGIN_USER_NAME VARCHAR(255),
+ OVERRIDE_SCRATCH_LOCATION VARCHAR(255),
+ OVERRIDE_ALLOCATION_PROJECT_NUMBER VARCHAR(255),
+ PRIMARY KEY (EXPERIMENT_ID, RESOURCE_HOST_ID, QUEUE_NAME),
+ CONSTRAINT FK_COMP_SCHED_USER_CONF FOREIGN KEY (EXPERIMENT_ID) REFERENCES USER_CONFIGURATION_DATA (EXPERIMENT_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS PROCESS (
+ PROCESS_ID VARCHAR(255) NOT NULL,
+ EXPERIMENT_ID VARCHAR(255) NOT NULL,
+ CREATION_TIME TIMESTAMP NULL,
+ LAST_UPDATE_TIME TIMESTAMP NULL,
+ PROCESS_DETAIL LONGTEXT,
+ APPLICATION_INTERFACE_ID VARCHAR(255),
+ APPLICATION_DEPLOYMENT_ID VARCHAR(255),
+ COMPUTE_RESOURCE_ID VARCHAR(255),
+ TASK_DAG LONGTEXT,
+ GATEWAY_EXECUTION_ID VARCHAR(255),
+ ENABLE_EMAIL_NOTIFICATION TINYINT(1) NOT NULL DEFAULT 0,
+ EMAIL_ADDRESSES LONGTEXT,
+ INPUT_STORAGE_RESOURCE_ID VARCHAR(255),
+ OUTPUT_STORAGE_RESOURCE_ID VARCHAR(255),
+ USER_DN VARCHAR(255),
+ GENERATE_CERT TINYINT(1) NOT NULL DEFAULT 0,
+ EXPERIMENT_DATA_DIR VARCHAR(512),
+ USERNAME VARCHAR(255),
+ GROUP_RESOURCE_PROFILE_ID VARCHAR(255),
+ USE_USER_CR_PREF TINYINT(1) NOT NULL DEFAULT 0,
+ PRIMARY KEY (PROCESS_ID),
+ CONSTRAINT FK_PROCESS_EXPERIMENT FOREIGN KEY (EXPERIMENT_ID) REFERENCES EXPERIMENT (EXPERIMENT_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS PROCESS_STATUS (
+ STATUS_ID VARCHAR(255) NOT NULL,
+ PROCESS_ID VARCHAR(255) NOT NULL,
+ STATE VARCHAR(255),
+ TIME_OF_STATE_CHANGE TIMESTAMP NULL,
+ REASON LONGTEXT,
+ PRIMARY KEY (STATUS_ID, PROCESS_ID),
+ CONSTRAINT FK_PROC_STATUS_PROCESS FOREIGN KEY (PROCESS_ID) REFERENCES PROCESS (PROCESS_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS PROCESS_ERROR (
+ ERROR_ID VARCHAR(255) NOT NULL,
+ PROCESS_ID VARCHAR(255) NOT NULL,
+ CREATION_TIME TIMESTAMP NULL,
+ ACTUAL_ERROR_MESSAGE LONGTEXT,
+ USER_FRIENDLY_MESSAGE LONGTEXT,
+ TRANSIENT_OR_PERSISTENT TINYINT(1) NOT NULL DEFAULT 0,
+ ROOT_CAUSE_ERROR_ID_LIST LONGTEXT,
+ PRIMARY KEY (ERROR_ID, PROCESS_ID),
+ CONSTRAINT FK_PROC_ERROR_PROCESS FOREIGN KEY (PROCESS_ID) REFERENCES PROCESS (PROCESS_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS PROCESS_INPUT (
+ PROCESS_ID VARCHAR(255) NOT NULL,
+ INPUT_NAME VARCHAR(255) NOT NULL,
+ INPUT_VALUE LONGTEXT,
+ DATA_TYPE VARCHAR(255),
+ APPLICATION_ARGUMENT VARCHAR(255),
+ STANDARD_INPUT TINYINT(1) NOT NULL DEFAULT 0,
+ USER_FRIENDLY_DESCRIPTION LONGTEXT,
+ METADATA VARCHAR(4096),
+ INPUT_ORDER INT NOT NULL DEFAULT 0,
+ IS_REQUIRED TINYINT(1) NOT NULL DEFAULT 0,
+ REQUIRED_TO_ADDED_TO_CMD TINYINT(1) NOT NULL DEFAULT 0,
+ DATA_STAGED TINYINT(1) NOT NULL DEFAULT 0,
+ STORAGE_RESOURCE_ID VARCHAR(255),
+ IS_READ_ONLY TINYINT(1) NOT NULL DEFAULT 0,
+ OVERRIDE_FILENAME VARCHAR(255),
+ PRIMARY KEY (PROCESS_ID, INPUT_NAME),
+ CONSTRAINT FK_PROC_INPUT_PROCESS FOREIGN KEY (PROCESS_ID) REFERENCES PROCESS (PROCESS_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS PROCESS_OUTPUT (
+ PROCESS_ID VARCHAR(255) NOT NULL,
+ OUTPUT_NAME VARCHAR(255) NOT NULL,
+ OUTPUT_VALUE LONGTEXT,
+ DATA_TYPE VARCHAR(255),
+ APPLICATION_ARGUMENT VARCHAR(255),
+ IS_REQUIRED TINYINT(1) NOT NULL DEFAULT 0,
+ REQUIRED_TO_ADDED_TO_CMD TINYINT(1) NOT NULL DEFAULT 0,
+ DATA_MOVEMENT TINYINT(1) NOT NULL DEFAULT 0,
+ LOCATION VARCHAR(255),
+ SEARCH_QUERY VARCHAR(255),
+ OUTPUT_STREAMING TINYINT(1) NOT NULL DEFAULT 0,
+ STORAGE_RESOURCE_ID VARCHAR(255),
+ METADATA VARCHAR(4096),
+ PRIMARY KEY (PROCESS_ID, OUTPUT_NAME),
+ CONSTRAINT FK_PROC_OUTPUT_PROCESS FOREIGN KEY (PROCESS_ID) REFERENCES PROCESS (PROCESS_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS PROCESS_RESOURCE_SCHEDULE (
+ PROCESS_ID VARCHAR(255) NOT NULL,
+ RESOURCE_HOST_ID VARCHAR(255),
+ TOTAL_CPU_COUNT INT NOT NULL DEFAULT 0,
+ NODE_COUNT INT NOT NULL DEFAULT 0,
+ NUMBER_OF_THREADS INT NOT NULL DEFAULT 0,
+ QUEUE_NAME VARCHAR(255),
+ WALL_TIME_LIMIT INT NOT NULL DEFAULT 0,
+ TOTAL_PHYSICAL_MEMORY INT NOT NULL DEFAULT 0,
+ STATIC_WORKING_DIR VARCHAR(255),
+ OVERRIDE_LOGIN_USER_NAME VARCHAR(255),
+ OVERRIDE_SCRATCH_LOCATION VARCHAR(255),
+ OVERRIDE_ALLOCATION_PROJECT_NUMBER VARCHAR(255),
+ PRIMARY KEY (PROCESS_ID),
+ CONSTRAINT FK_PROC_RESCHED_PROCESS FOREIGN KEY (PROCESS_ID) REFERENCES PROCESS (PROCESS_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS PROCESS_WORKFLOW (
+ PROCESS_ID VARCHAR(255) NOT NULL,
+ WORKFLOW_ID VARCHAR(255) NOT NULL,
+ CREATION_TIME TIMESTAMP NULL,
+ TYPE VARCHAR(255),
+ PRIMARY KEY (PROCESS_ID, WORKFLOW_ID),
+ CONSTRAINT FK_PROC_WORKFLOW_PROCESS FOREIGN KEY (PROCESS_ID) REFERENCES PROCESS (PROCESS_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS TASK (
+ TASK_ID VARCHAR(255) NOT NULL,
+ TASK_TYPE VARCHAR(255),
+ PARENT_PROCESS_ID VARCHAR(255) NOT NULL,
+ CREATION_TIME TIMESTAMP NULL,
+ LAST_UPDATE_TIME TIMESTAMP NULL,
+ TASK_DETAIL LONGTEXT,
+ SUB_TASK_MODEL LONGBLOB,
+ PRIMARY KEY (TASK_ID),
+ CONSTRAINT FK_TASK_PROCESS FOREIGN KEY (PARENT_PROCESS_ID) REFERENCES PROCESS (PROCESS_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS TASK_STATUS (
+ STATUS_ID VARCHAR(255) NOT NULL,
+ TASK_ID VARCHAR(255) NOT NULL,
+ STATE VARCHAR(255),
+ TIME_OF_STATE_CHANGE TIMESTAMP NULL,
+ REASON LONGTEXT,
+ PRIMARY KEY (STATUS_ID, TASK_ID),
+ CONSTRAINT FK_TASK_STATUS_TASK FOREIGN KEY (TASK_ID) REFERENCES TASK (TASK_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS TASK_ERROR (
+ ERROR_ID VARCHAR(255) NOT NULL,
+ TASK_ID VARCHAR(255) NOT NULL,
+ CREATION_TIME TIMESTAMP NULL,
+ ACTUAL_ERROR_MESSAGE LONGTEXT,
+ USER_FRIENDLY_MESSAGE LONGTEXT,
+ TRANSIENT_OR_PERSISTENT TINYINT(1) NOT NULL DEFAULT 0,
+ ROOT_CAUSE_ERROR_ID_LIST LONGTEXT,
+ PRIMARY KEY (ERROR_ID, TASK_ID),
+ CONSTRAINT FK_TASK_ERROR_TASK FOREIGN KEY (TASK_ID) REFERENCES TASK (TASK_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS JOB (
+ JOB_ID VARCHAR(255) NOT NULL,
+ TASK_ID VARCHAR(255) NOT NULL,
+ PROCESS_ID VARCHAR(255),
+ JOB_DESCRIPTION LONGTEXT,
+ CREATION_TIME TIMESTAMP NULL,
+ COMPUTE_RESOURCE_CONSUMED VARCHAR(255),
+ JOB_NAME VARCHAR(255),
+ WORKING_DIR VARCHAR(255),
+ STD_OUT LONGTEXT,
+ STD_ERR LONGTEXT,
+ EXIT_CODE INT NOT NULL DEFAULT 0,
+ PRIMARY KEY (JOB_ID, TASK_ID),
+ CONSTRAINT FK_JOB_TASK FOREIGN KEY (TASK_ID) REFERENCES TASK (TASK_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS JOB_STATUS (
+ STATUS_ID VARCHAR(255) NOT NULL,
+ JOB_ID VARCHAR(255) NOT NULL,
+ TASK_ID VARCHAR(255) NOT NULL,
+ STATE VARCHAR(255),
+ TIME_OF_STATE_CHANGE TIMESTAMP NULL,
+ REASON LONGTEXT,
+ PRIMARY KEY (STATUS_ID, JOB_ID, TASK_ID),
+ CONSTRAINT FK_JOB_STATUS_JOB FOREIGN KEY (JOB_ID, TASK_ID) REFERENCES JOB (JOB_ID, TASK_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+-- ============================================================================
+-- 2. APPLICATION CATALOG
+-- ============================================================================
+
+CREATE TABLE IF NOT EXISTS GATEWAY_GROUPS (
+ GATEWAY_ID VARCHAR(255) NOT NULL,
+ ADMINS_GROUP_ID VARCHAR(255),
+ READ_ONLY_ADMINS_GROUP_ID VARCHAR(255),
+ DEFAULT_GATEWAY_USERS_GROUP_ID VARCHAR(255),
+ PRIMARY KEY (GATEWAY_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS GATEWAY_PROFILE (
+ GATEWAY_ID VARCHAR(255) NOT NULL,
+ CREATION_TIME TIMESTAMP NULL,
+ CS_TOKEN VARCHAR(255),
+ IDENTITY_SERVER_PWD_CRED_TOKEN VARCHAR(255),
+ IDENTITY_SERVER_TENANT VARCHAR(255),
+ UPDATE_TIME TIMESTAMP NULL,
+ PRIMARY KEY (GATEWAY_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS GROUP_RESOURCE_PROFILE (
+ GROUP_RESOURCE_PROFILE_ID VARCHAR(255) NOT NULL,
+ GATEWAY_ID VARCHAR(255),
+ GROUP_RESOURCE_PROFILE_NAME VARCHAR(255),
+ CREATION_TIME BIGINT,
+ UPDATE_TIME BIGINT,
+ DEFAULT_CREDENTIAL_STORE_TOKEN VARCHAR(255),
+ PRIMARY KEY (GROUP_RESOURCE_PROFILE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS COMPUTE_RESOURCE (
+ RESOURCE_ID VARCHAR(255) NOT NULL,
+ CREATION_TIME TIMESTAMP NULL,
+ ENABLED SMALLINT,
+ GATEWAY_USAGE_EXECUTABLE VARCHAR(255),
+ GATEWAY_USAGE_MODULE_LOAD_CMD VARCHAR(255),
+ GATEWAY_USAGE_REPORTING TINYINT(1),
+ HOST_NAME VARCHAR(255),
+ MAX_MEMORY_NODE INT,
+ RESOURCE_DESCRIPTION VARCHAR(255),
+ UPDATE_TIME TIMESTAMP NULL,
+ CPUS_PER_NODE INT,
+ DEFAULT_NODE_COUNT INT,
+ DEFAULT_CPU_COUNT INT,
+ DEFAULT_WALLTIME INT,
+ PRIMARY KEY (RESOURCE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS HOST_ALIAS (
+ RESOURCE_ID VARCHAR(255) NOT NULL,
+ ALIAS VARCHAR(255),
+ CONSTRAINT FK_HOST_ALIAS_RESOURCE FOREIGN KEY (RESOURCE_ID) REFERENCES COMPUTE_RESOURCE (RESOURCE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS HOST_IPADDRESS (
+ RESOURCE_ID VARCHAR(255) NOT NULL,
+ IP_ADDRESS VARCHAR(255),
+ CONSTRAINT FK_HOST_IPADDRESS_RESOURCE FOREIGN KEY (RESOURCE_ID) REFERENCES COMPUTE_RESOURCE (RESOURCE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS COMPUTE_RESOURCE_FILE_SYSTEM (
+ COMPUTE_RESOURCE_ID VARCHAR(255) NOT NULL,
+ FILE_SYSTEM VARCHAR(255) NOT NULL,
+ PATH VARCHAR(255),
+ PRIMARY KEY (COMPUTE_RESOURCE_ID, FILE_SYSTEM),
+ CONSTRAINT FK_CRFS_RESOURCE FOREIGN KEY (COMPUTE_RESOURCE_ID) REFERENCES COMPUTE_RESOURCE (RESOURCE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS RESOURCE_JOB_MANAGER (
+ RESOURCE_JOB_MANAGER_ID VARCHAR(255) NOT NULL,
+ CREATION_TIME TIMESTAMP NOT NULL,
+ JOB_MANAGER_BIN_PATH VARCHAR(255),
+ PUSH_MONITORING_ENDPOINT VARCHAR(255),
+ RESOURCE_JOB_MANAGER_TYPE VARCHAR(255),
+ UPDATE_TIME TIMESTAMP NULL,
+ PRIMARY KEY (RESOURCE_JOB_MANAGER_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS JOB_MANAGER_COMMAND (
+ RESOURCE_JOB_MANAGER_ID VARCHAR(255) NOT NULL,
+ COMMAND_TYPE VARCHAR(255) NOT NULL,
+ COMMAND VARCHAR(255),
+ PRIMARY KEY (RESOURCE_JOB_MANAGER_ID, COMMAND_TYPE),
+ CONSTRAINT FK_JMC_RJM FOREIGN KEY (RESOURCE_JOB_MANAGER_ID) REFERENCES RESOURCE_JOB_MANAGER (RESOURCE_JOB_MANAGER_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS PARALLELISM_COMMAND (
+ RESOURCE_JOB_MANAGER_ID VARCHAR(255) NOT NULL,
+ COMMAND_TYPE VARCHAR(255) NOT NULL,
+ COMMAND VARCHAR(255),
+ PRIMARY KEY (RESOURCE_JOB_MANAGER_ID, COMMAND_TYPE),
+ CONSTRAINT FK_PC_RJM FOREIGN KEY (RESOURCE_JOB_MANAGER_ID) REFERENCES RESOURCE_JOB_MANAGER (RESOURCE_JOB_MANAGER_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS BATCH_QUEUE (
+ COMPUTE_RESOURCE_ID VARCHAR(255) NOT NULL,
+ QUEUE_NAME VARCHAR(255) NOT NULL,
+ MAX_JOB_IN_QUEUE INT,
+ MAX_MEMORY INT,
+ MAX_NODES INT,
+ MAX_PROCESSORS INT,
+ MAX_RUNTIME INT,
+ QUEUE_DESCRIPTION VARCHAR(255),
+ CPU_PER_NODE INT,
+ DEFAULT_NODE_COUNT INT,
+ DEFAULT_CPU_COUNT INT,
+ DEFAULT_WALLTIME INT,
+ QUEUE_SPECIFIC_MACROS VARCHAR(255),
+ IS_DEFAULT_QUEUE TINYINT(1),
+ PRIMARY KEY (COMPUTE_RESOURCE_ID, QUEUE_NAME),
+ CONSTRAINT FK_BQ_RESOURCE FOREIGN KEY (COMPUTE_RESOURCE_ID) REFERENCES COMPUTE_RESOURCE (RESOURCE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS JOB_SUBMISSION_INTERFACE (
+ COMPUTE_RESOURCE_ID VARCHAR(255) NOT NULL,
+ JOB_SUBMISSION_INTERFACE_ID VARCHAR(255) NOT NULL,
+ CREATION_TIME TIMESTAMP NULL,
+ JOB_SUBMISSION_PROTOCOL VARCHAR(255),
+ PRIORITY_ORDER INT,
+ UPDATE_TIME TIMESTAMP NULL,
+ PRIMARY KEY (COMPUTE_RESOURCE_ID, JOB_SUBMISSION_INTERFACE_ID),
+ CONSTRAINT FK_JSI_RESOURCE FOREIGN KEY (COMPUTE_RESOURCE_ID) REFERENCES COMPUTE_RESOURCE (RESOURCE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS DATA_MOVEMENT_INTERFACE (
+ COMPUTE_RESOURCE_ID VARCHAR(255) NOT NULL,
+ DATA_MOVEMENT_INTERFACE_ID VARCHAR(255) NOT NULL,
+ CREATION_TIME TIMESTAMP NULL,
+ DATA_MOVEMENT_PROTOCOL VARCHAR(255),
+ PRIORITY_ORDER INT,
+ UPDATE_TIME TIMESTAMP NULL,
+ PRIMARY KEY (COMPUTE_RESOURCE_ID, DATA_MOVEMENT_INTERFACE_ID),
+ CONSTRAINT FK_DMI_RESOURCE FOREIGN KEY (COMPUTE_RESOURCE_ID) REFERENCES COMPUTE_RESOURCE (RESOURCE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS SSH_JOB_SUBMISSION (
+ JOB_SUBMISSION_INTERFACE_ID VARCHAR(255) NOT NULL,
+ RESOURCE_JOB_MANAGER_ID VARCHAR(255) NOT NULL,
+ ALTERNATIVE_SSH_HOSTNAME VARCHAR(255),
+ CREATION_TIME TIMESTAMP NOT NULL,
+ MONITOR_MODE VARCHAR(255),
+ SECURITY_PROTOCOL VARCHAR(255),
+ SSH_PORT INT,
+ UPDATE_TIME TIMESTAMP NULL,
+ PRIMARY KEY (JOB_SUBMISSION_INTERFACE_ID),
+ CONSTRAINT FK_SJS_RJM FOREIGN KEY (RESOURCE_JOB_MANAGER_ID) REFERENCES RESOURCE_JOB_MANAGER (RESOURCE_JOB_MANAGER_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS LOCAL_SUBMISSION (
+ JOB_SUBMISSION_INTERFACE_ID VARCHAR(255) NOT NULL,
+ CREATION_TIME TIMESTAMP NULL,
+ UPDATE_TIME TIMESTAMP NULL,
+ RESOURCE_JOB_MANAGER_ID VARCHAR(255),
+ SECURITY_PROTOCOL VARCHAR(255),
+ PRIMARY KEY (JOB_SUBMISSION_INTERFACE_ID),
+ CONSTRAINT FK_LS_RJM FOREIGN KEY (RESOURCE_JOB_MANAGER_ID) REFERENCES RESOURCE_JOB_MANAGER (RESOURCE_JOB_MANAGER_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS GLOBUS_SUBMISSION (
+ SUBMISSION_ID VARCHAR(255) NOT NULL,
+ RESOURCE_JOB_MANAGER VARCHAR(255),
+ SECURITY_PROTOCAL VARCHAR(255),
+ PRIMARY KEY (SUBMISSION_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS GLOBUS_GK_ENDPOINT (
+ SUBMISSION_ID VARCHAR(255) NOT NULL,
+ ENDPOINT VARCHAR(255) NOT NULL,
+ PRIMARY KEY (SUBMISSION_ID, ENDPOINT)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS GSISSH_SUBMISSION (
+ SUBMISSION_ID VARCHAR(255) NOT NULL,
+ INSTALLED_PATH VARCHAR(255),
+ MONITOR_MODE VARCHAR(255),
+ RESOURCE_JOB_MANAGER VARCHAR(255),
+ SSH_PORT INT,
+ PRIMARY KEY (SUBMISSION_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS GSISSH_EXPORT (
+ SUBMISSION_ID VARCHAR(255) NOT NULL,
+ EXPORT VARCHAR(255) NOT NULL,
+ PRIMARY KEY (SUBMISSION_ID, EXPORT)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS GSISSH_POSTJOBCOMMAND (
+ SUBMISSION_ID VARCHAR(255) NOT NULL,
+ COMMAND VARCHAR(255) NOT NULL,
+ PRIMARY KEY (SUBMISSION_ID, COMMAND)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS GSISSH_PREJOBCOMMAND (
+ SUBMISSION_ID VARCHAR(255) NOT NULL,
+ COMMAND VARCHAR(255) NOT NULL,
+ PRIMARY KEY (SUBMISSION_ID, COMMAND)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS UNICORE_SUBMISSION (
+ SUBMISSION_ID VARCHAR(255) NOT NULL,
+ SECURITY_PROTOCAL VARCHAR(255),
+ UNICORE_ENDPOINT_URL VARCHAR(255),
+ PRIMARY KEY (SUBMISSION_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS CLOUD_JOB_SUBMISSION (
+ JOB_SUBMISSION_INTERFACE_ID VARCHAR(255) NOT NULL,
+ SECURITY_PROTOCOL VARCHAR(255),
+ NODE_ID VARCHAR(255),
+ EXECUTABLE_TYPE VARCHAR(255),
+ PROVIDER_NAME VARCHAR(255),
+ USER_ACCOUNT_NAME VARCHAR(255),
+ PRIMARY KEY (JOB_SUBMISSION_INTERFACE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS GRIDFTP_DATA_MOVEMENT (
+ DATA_MOVEMENT_INTERFACE_ID VARCHAR(255) NOT NULL,
+ CREATION_TIME TIMESTAMP NULL,
+ SECURITY_PROTOCOL VARCHAR(255),
+ UPDATE_TIME TIMESTAMP NULL,
+ PRIMARY KEY (DATA_MOVEMENT_INTERFACE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS GRIDFTP_ENDPOINT (
+ DATA_MOVEMENT_INTERFACE_ID VARCHAR(255) NOT NULL,
+ ENDPOINT VARCHAR(255) NOT NULL,
+ CREATION_TIME TIMESTAMP NULL,
+ UPDATE_TIME TIMESTAMP NULL,
+ PRIMARY KEY (DATA_MOVEMENT_INTERFACE_ID, ENDPOINT),
+ CONSTRAINT FK_GE_DMI FOREIGN KEY (DATA_MOVEMENT_INTERFACE_ID) REFERENCES GRIDFTP_DATA_MOVEMENT (DATA_MOVEMENT_INTERFACE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS SCP_DATA_MOVEMENT (
+ DATA_MOVEMENT_INTERFACE_ID VARCHAR(255) NOT NULL,
+ ALTERNATIVE_SCP_HOSTNAME VARCHAR(255),
+ CREATION_TIME TIMESTAMP NULL,
+ QUEUE_DESCRIPTION VARCHAR(255),
+ SECURITY_PROTOCOL VARCHAR(255),
+ SSH_PORT INT,
+ UPDATE_TIME TIMESTAMP NULL,
+ PRIMARY KEY (DATA_MOVEMENT_INTERFACE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS LOCAL_DATA_MOVEMENT (
+ DATA_MOVEMENT_INTERFACE_ID VARCHAR(255) NOT NULL,
+ PRIMARY KEY (DATA_MOVEMENT_INTERFACE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS UNICORE_DATAMOVEMENT (
+ DATAMOVEMENT_ID VARCHAR(255) NOT NULL,
+ SECURITY_PROTOCAL VARCHAR(255),
+ UNICORE_ENDPOINT_URL VARCHAR(255),
+ PRIMARY KEY (DATAMOVEMENT_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS STORAGE_RESOURCE (
+ STORAGE_RESOURCE_ID VARCHAR(255) NOT NULL,
+ CREATION_TIME TIMESTAMP NULL,
+ DESCRIPTION VARCHAR(255),
+ ENABLED TINYINT(1),
+ HOST_NAME VARCHAR(255),
+ UPDATE_TIME TIMESTAMP NULL,
+ PRIMARY KEY (STORAGE_RESOURCE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS STORAGE_INTERFACE (
+ STORAGE_RESOURCE_ID VARCHAR(255) NOT NULL,
+ DATA_MOVEMENT_INTERFACE_ID VARCHAR(255) NOT NULL,
+ CREATION_TIME TIMESTAMP NULL,
+ DATA_MOVEMENT_PROTOCOL VARCHAR(255),
+ PRIORITY_ORDER INT,
+ UPDATE_TIME TIMESTAMP NULL,
+ PRIMARY KEY (STORAGE_RESOURCE_ID, DATA_MOVEMENT_INTERFACE_ID),
+ CONSTRAINT FK_SI_SR FOREIGN KEY (STORAGE_RESOURCE_ID) REFERENCES STORAGE_RESOURCE (STORAGE_RESOURCE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS COMPUTE_RESOURCE_PREFERENCE (
+ GATEWAY_ID VARCHAR(255) NOT NULL,
+ RESOURCE_ID VARCHAR(255) NOT NULL,
+ ALLOCATION_PROJECT_NUMBER VARCHAR(255),
+ LOGIN_USERNAME VARCHAR(255),
+ OVERRIDE_BY_AIRAVATA TINYINT(1),
+ PREFERED_BATCH_QUEUE VARCHAR(255),
+ PREFERED_DATA_MOVE_PROTOCOL VARCHAR(255),
+ PREFERED_JOB_SUB_PROTOCOL VARCHAR(255),
+ QUALITY_OF_SERVICE VARCHAR(255),
+ RESERVATION VARCHAR(255),
+ RESERVATION_END_TIME TIMESTAMP NULL,
+ RESERVATION_START_TIME TIMESTAMP NULL,
+ RESOURCE_CS_TOKEN VARCHAR(255),
+ SCRATCH_LOCATION VARCHAR(255),
+ USAGE_REPORTING_GATEWAY_ID VARCHAR(255),
+ SSH_ACCOUNT_PROVISIONER VARCHAR(255),
+ SSH_ACCOUNT_PROVISIONER_ADDITIONAL_INFO VARCHAR(255),
+ PRIMARY KEY (GATEWAY_ID, RESOURCE_ID),
+ CONSTRAINT FK_CRP_GP FOREIGN KEY (GATEWAY_ID) REFERENCES GATEWAY_PROFILE (GATEWAY_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS SSH_ACCOUNT_PROVISIONER_CONFIG (
+ GATEWAY_ID VARCHAR(255) NOT NULL,
+ RESOURCE_ID VARCHAR(255) NOT NULL,
+ CONFIG_NAME VARCHAR(255) NOT NULL,
+ CONFIG_VALUE VARCHAR(255),
+ PRIMARY KEY (GATEWAY_ID, RESOURCE_ID, CONFIG_NAME),
+ CONSTRAINT FK_SAPC_CRP FOREIGN KEY (GATEWAY_ID, RESOURCE_ID)
+ REFERENCES COMPUTE_RESOURCE_PREFERENCE (GATEWAY_ID, RESOURCE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS STORAGE_PREFERENCE (
+ GATEWAY_ID VARCHAR(255) NOT NULL,
+ STORAGE_RESOURCE_ID VARCHAR(255) NOT NULL,
+ FS_ROOT_LOCATION VARCHAR(255),
+ LOGIN_USERNAME VARCHAR(255),
+ RESOURCE_CS_TOKEN VARCHAR(255),
+ PRIMARY KEY (GATEWAY_ID, STORAGE_RESOURCE_ID),
+ CONSTRAINT FK_SP_GP FOREIGN KEY (GATEWAY_ID) REFERENCES GATEWAY_PROFILE (GATEWAY_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS GROUP_COMPUTE_RESOURCE_PREFERENCE (
+ RESOURCE_ID VARCHAR(255) NOT NULL,
+ GROUP_RESOURCE_PROFILE_ID VARCHAR(255) NOT NULL,
+ RESOURCE_TYPE VARCHAR(31) NOT NULL,
+ LOGIN_USERNAME VARCHAR(255),
+ SCRATCH_LOCATION VARCHAR(255),
+ OVERRIDE_BY_AIRAVATA SMALLINT,
+ PREFERED_DATA_MOVE_PROTOCOL VARCHAR(255),
+ PREFERED_JOB_SUB_PROTOCOL VARCHAR(255),
+ RESOURCE_CS_TOKEN VARCHAR(255),
+ PRIMARY KEY (RESOURCE_ID, GROUP_RESOURCE_PROFILE_ID),
+ CONSTRAINT FK_GCRP_GRP FOREIGN KEY (GROUP_RESOURCE_PROFILE_ID)
+ REFERENCES GROUP_RESOURCE_PROFILE (GROUP_RESOURCE_PROFILE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS SLURM_GROUP_COMPUTE_RESOURCE_PREFERENCE (
+ RESOURCE_ID VARCHAR(255) NOT NULL,
+ GROUP_RESOURCE_PROFILE_ID VARCHAR(255) NOT NULL,
+ ALLOCATION_PROJECT_NUMBER VARCHAR(255),
+ PREFERED_BATCH_QUEUE VARCHAR(255),
+ QUALITY_OF_SERVICE VARCHAR(255),
+ USAGE_REPORTING_GATEWAY_ID VARCHAR(255),
+ SSH_ACCOUNT_PROVISIONER VARCHAR(255),
+ SSH_ACCOUNT_PROVISIONER_ADDITIONAL_INFO VARCHAR(255),
+ PRIMARY KEY (RESOURCE_ID, GROUP_RESOURCE_PROFILE_ID),
+ CONSTRAINT FK_SGCRP_GCRP FOREIGN KEY (RESOURCE_ID, GROUP_RESOURCE_PROFILE_ID)
+ REFERENCES GROUP_COMPUTE_RESOURCE_PREFERENCE (RESOURCE_ID, GROUP_RESOURCE_PROFILE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS AWS_GROUP_COMPUTE_RESOURCE_PREFERENCE (
+ RESOURCE_ID VARCHAR(255) NOT NULL,
+ GROUP_RESOURCE_PROFILE_ID VARCHAR(255) NOT NULL,
+ AWS_REGION VARCHAR(255) NOT NULL,
+ PREFERRED_AMI_ID VARCHAR(255) NOT NULL,
+ PREFERRED_INSTANCE_TYPE VARCHAR(255) NOT NULL,
+ PRIMARY KEY (RESOURCE_ID, GROUP_RESOURCE_PROFILE_ID),
+ CONSTRAINT FK_AGCRP_GCRP FOREIGN KEY (RESOURCE_ID, GROUP_RESOURCE_PROFILE_ID)
+ REFERENCES GROUP_COMPUTE_RESOURCE_PREFERENCE (RESOURCE_ID, GROUP_RESOURCE_PROFILE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS GRP_SSH_ACC_PROV_CONFIG (
+ RESOURCE_ID VARCHAR(255) NOT NULL,
+ GROUP_RESOURCE_PROFILE_ID VARCHAR(255) NOT NULL,
+ CONFIG_NAME VARCHAR(255) NOT NULL,
+ CONFIG_VALUE VARCHAR(255),
+ PRIMARY KEY (RESOURCE_ID, GROUP_RESOURCE_PROFILE_ID, CONFIG_NAME),
+ CONSTRAINT FK_GSAPC_GCRP FOREIGN KEY (RESOURCE_ID, GROUP_RESOURCE_PROFILE_ID)
+ REFERENCES GROUP_COMPUTE_RESOURCE_PREFERENCE (RESOURCE_ID, GROUP_RESOURCE_PROFILE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS COMPUTE_RESOURCE_RESERVATION (
+ RESERVATION_ID VARCHAR(255) NOT NULL,
+ RESERVATION_NAME VARCHAR(255) NOT NULL,
+ START_TIME TIMESTAMP NOT NULL,
+ END_TIME TIMESTAMP NOT NULL,
+ RESOURCE_ID VARCHAR(255) NOT NULL,
+ GROUP_RESOURCE_PROFILE_ID VARCHAR(255) NOT NULL,
+ PRIMARY KEY (RESERVATION_ID),
+ CONSTRAINT FK_CRR_GCRP FOREIGN KEY (RESOURCE_ID, GROUP_RESOURCE_PROFILE_ID)
+ REFERENCES GROUP_COMPUTE_RESOURCE_PREFERENCE (RESOURCE_ID, GROUP_RESOURCE_PROFILE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS COMPUTE_RESOURCE_RESERVATION_QUEUE (
+ RESERVATION_ID VARCHAR(255) NOT NULL,
+ QUEUE_NAME VARCHAR(255) NOT NULL,
+ CONSTRAINT FK_CRRQ_CRR FOREIGN KEY (RESERVATION_ID) REFERENCES COMPUTE_RESOURCE_RESERVATION (RESERVATION_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS COMPUTE_RESOURCE_POLICY (
+ RESOURCE_POLICY_ID VARCHAR(255) NOT NULL,
+ COMPUTE_RESOURCE_ID VARCHAR(255),
+ GROUP_RESOURCE_PROFILE_ID VARCHAR(255) NOT NULL,
+ PRIMARY KEY (RESOURCE_POLICY_ID),
+ CONSTRAINT FK_CRP2_GRP FOREIGN KEY (GROUP_RESOURCE_PROFILE_ID)
+ REFERENCES GROUP_RESOURCE_PROFILE (GROUP_RESOURCE_PROFILE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS COMPUTE_RESOURCE_POLICY_QUEUES (
+ RESOURCE_POLICY_ID VARCHAR(255) NOT NULL,
+ QUEUE_NAME VARCHAR(255),
+ CONSTRAINT FK_CRPQ_CRP FOREIGN KEY (RESOURCE_POLICY_ID) REFERENCES COMPUTE_RESOURCE_POLICY (RESOURCE_POLICY_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS BATCH_QUEUE_RESOURCE_POLICY (
+ RESOURCE_POLICY_ID VARCHAR(255) NOT NULL,
+ COMPUTE_RESOURCE_ID VARCHAR(255),
+ GROUP_RESOURCE_PROFILE_ID VARCHAR(255) NOT NULL,
+ QUEUE_NAME VARCHAR(255),
+ MAX_ALLOWED_NODES INT,
+ MAX_ALLOWED_CORES INT,
+ MAX_ALLOWED_WALLTIME INT,
+ PRIMARY KEY (RESOURCE_POLICY_ID),
+ CONSTRAINT FK_BQRP_GRP FOREIGN KEY (GROUP_RESOURCE_PROFILE_ID)
+ REFERENCES GROUP_RESOURCE_PROFILE (GROUP_RESOURCE_PROFILE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS APPLICATION_MODULE (
+ MODULE_ID VARCHAR(255) NOT NULL,
+ CREATION_TIME TIMESTAMP NOT NULL,
+ GATEWAY_ID VARCHAR(255) NOT NULL,
+ MODULE_DESC VARCHAR(255),
+ MODULE_NAME VARCHAR(255),
+ MODULE_VERSION VARCHAR(255),
+ UPDATE_TIME TIMESTAMP NOT NULL,
+ PRIMARY KEY (MODULE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS APPLICATION_INTERFACE (
+ INTERFACE_ID VARCHAR(255) NOT NULL,
+ APPLICATION_DESCRIPTION VARCHAR(255),
+ APPLICATION_NAME VARCHAR(255),
+ ARCHIVE_WORKING_DIRECTORY TINYINT(1),
+ CREATION_TIME TIMESTAMP NOT NULL,
+ GATEWAY_ID VARCHAR(255) NOT NULL,
+ UPDATE_TIME TIMESTAMP NOT NULL,
+ HAS_OPTIONAL_FILE_INPUTS TINYINT(1),
+ CLEAN_AFTER_STAGED TINYINT(1),
+ PRIMARY KEY (INTERFACE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS APP_MODULE_MAPPING (
+ INTERFACE_ID VARCHAR(255) NOT NULL,
+ MODULE_ID VARCHAR(255) NOT NULL,
+ PRIMARY KEY (INTERFACE_ID, MODULE_ID),
+ CONSTRAINT FK_AMM_AI FOREIGN KEY (INTERFACE_ID) REFERENCES APPLICATION_INTERFACE (INTERFACE_ID),
+ CONSTRAINT FK_AMM_AM FOREIGN KEY (MODULE_ID) REFERENCES APPLICATION_MODULE (MODULE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS APPLICATION_INPUT (
+ INTERFACE_ID VARCHAR(255) NOT NULL,
+ INPUT_KEY VARCHAR(255) NOT NULL,
+ APP_ARGUMENT VARCHAR(255),
+ DATA_STAGED TINYINT(1),
+ DATA_TYPE VARCHAR(255),
+ INPUT_ORDER INT,
+ INPUT_VALUE VARCHAR(255),
+ IS_REQUIRED TINYINT(1),
+ METADATA VARCHAR(4096),
+ REQUIRED_TO_COMMANDLINE TINYINT(1),
+ STANDARD_INPUT TINYINT(1),
+ USER_FRIENDLY_DESC LONGTEXT,
+ IS_READ_ONLY TINYINT(1),
+ OVERRIDE_FILENAME VARCHAR(255),
+ PRIMARY KEY (INTERFACE_ID, INPUT_KEY),
+ CONSTRAINT FK_AI_AIF FOREIGN KEY (INTERFACE_ID) REFERENCES APPLICATION_INTERFACE (INTERFACE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS APPLICATION_OUTPUT (
+ INTERFACE_ID VARCHAR(255) NOT NULL,
+ OUTPUT_KEY VARCHAR(255) NOT NULL,
+ APP_ARGUMENT VARCHAR(255),
+ DATA_MOVEMENT TINYINT(1),
+ DATA_NAME_LOCATION VARCHAR(255),
+ DATA_TYPE VARCHAR(255),
+ IS_REQUIRED TINYINT(1),
+ OUTPUT_STREAMING TINYINT(1),
+ OUTPUT_VALUE VARCHAR(255),
+ REQUIRED_TO_COMMANDLINE TINYINT(1),
+ SEARCH_QUERY VARCHAR(255),
+ METADATA VARCHAR(4096),
+ PRIMARY KEY (INTERFACE_ID, OUTPUT_KEY),
+ CONSTRAINT FK_AO_AIF FOREIGN KEY (INTERFACE_ID) REFERENCES APPLICATION_INTERFACE (INTERFACE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS APPLICATION_DEPLOYMENT (
+ DEPLOYMENT_ID VARCHAR(255) NOT NULL,
+ APPLICATION_DESC VARCHAR(255),
+ CREATION_TIME TIMESTAMP NOT NULL,
+ ENV_MODULE_LOAD_CMD VARCHAR(255),
+ EXECUTABLE_PATH VARCHAR(255),
+ GATEWAY_ID VARCHAR(255) NOT NULL,
+ parallelism VARCHAR(255),
+ UPDATE_TIME TIMESTAMP NOT NULL,
+ COMPUTE_HOSTID VARCHAR(255),
+ APP_MODULE_ID VARCHAR(255),
+ DEFAULT_NODE_COUNT INT,
+ DEFAULT_CPU_COUNT INT,
+ DEFAULT_WALLTIME INT,
+ DEFAULT_QUEUE_NAME VARCHAR(255),
+ EDITABLE_BY_USER TINYINT(1),
+ PRIMARY KEY (DEPLOYMENT_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS MODULE_LOAD_CMD (
+ APP_DEPLOYMENT_ID VARCHAR(255) NOT NULL,
+ CMD VARCHAR(255) NOT NULL,
+ COMMAND_ORDER INT,
+ PRIMARY KEY (APP_DEPLOYMENT_ID, CMD),
+ CONSTRAINT FK_MLC_AD FOREIGN KEY (APP_DEPLOYMENT_ID) REFERENCES APPLICATION_DEPLOYMENT (DEPLOYMENT_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS APP_ENVIRONMENT (
+ DEPLOYMENT_ID VARCHAR(255) NOT NULL,
+ NAME VARCHAR(255) NOT NULL,
+ VALUE VARCHAR(255),
+ ENV_ORDER INT,
+ PRIMARY KEY (DEPLOYMENT_ID, NAME),
+ CONSTRAINT FK_AE_AD FOREIGN KEY (DEPLOYMENT_ID) REFERENCES APPLICATION_DEPLOYMENT (DEPLOYMENT_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS LIBRARY_PREPAND_PATH (
+ DEPLOYMENT_ID VARCHAR(255) NOT NULL,
+ NAME VARCHAR(255) NOT NULL,
+ VALUE VARCHAR(255),
+ PRIMARY KEY (DEPLOYMENT_ID, NAME),
+ CONSTRAINT FK_LPP_AD FOREIGN KEY (DEPLOYMENT_ID) REFERENCES APPLICATION_DEPLOYMENT (DEPLOYMENT_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS LIBRARY_APEND_PATH (
+ DEPLOYMENT_ID VARCHAR(255) NOT NULL,
+ NAME VARCHAR(255) NOT NULL,
+ VALUE VARCHAR(255),
+ PRIMARY KEY (DEPLOYMENT_ID, NAME),
+ CONSTRAINT FK_LAP_AD FOREIGN KEY (DEPLOYMENT_ID) REFERENCES APPLICATION_DEPLOYMENT (DEPLOYMENT_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS PREJOB_COMMAND (
+ APPDEPLOYMENT_ID VARCHAR(255) NOT NULL,
+ COMMAND VARCHAR(255) NOT NULL,
+ COMMAND_ORDER INT,
+ PRIMARY KEY (APPDEPLOYMENT_ID, COMMAND),
+ CONSTRAINT FK_PC2_AD FOREIGN KEY (APPDEPLOYMENT_ID) REFERENCES APPLICATION_DEPLOYMENT (DEPLOYMENT_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS POSTJOB_COMMAND (
+ APPDEPLOYMENT_ID VARCHAR(255) NOT NULL,
+ COMMAND VARCHAR(255) NOT NULL,
+ COMMAND_ORDER INT,
+ PRIMARY KEY (APPDEPLOYMENT_ID, COMMAND),
+ CONSTRAINT FK_POC_AD FOREIGN KEY (APPDEPLOYMENT_ID) REFERENCES APPLICATION_DEPLOYMENT (DEPLOYMENT_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS USER_RESOURCE_PROFILE (
+ USER_ID VARCHAR(255) NOT NULL,
+ GATEWAY_ID VARCHAR(255) NOT NULL,
+ CS_TOKEN VARCHAR(255),
+ IDENTITY_SERVER_PWD_CRED_TOKEN VARCHAR(255),
+ IDENTITY_SERVER_TENANT VARCHAR(255),
+ CREATION_TIME TIMESTAMP NULL,
+ UPDATE_TIME TIMESTAMP NULL,
+ PRIMARY KEY (USER_ID, GATEWAY_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS USER_COMPUTE_RESOURCE_PREFERENCE (
+ RESOURCE_ID VARCHAR(255) NOT NULL,
+ USER_ID VARCHAR(255) NOT NULL,
+ GATEWAY_ID VARCHAR(255) NOT NULL,
+ PREFERED_BATCH_QUEUE VARCHAR(255),
+ RESOURCE_CS_TOKEN VARCHAR(255),
+ LOGIN_USERNAME VARCHAR(255),
+ ALLOCATION_PROJECT_NUMBER VARCHAR(255),
+ QUALITY_OF_SERVICE VARCHAR(255),
+ RESERVATION VARCHAR(255),
+ RESERVATION_START_TIME TIMESTAMP NULL,
+ RESERVATION_END_TIME TIMESTAMP NULL,
+ SCRATCH_LOCATION VARCHAR(255),
+ VALIDATED TINYINT(1),
+ PRIMARY KEY (RESOURCE_ID, USER_ID, GATEWAY_ID),
+ CONSTRAINT FK_UCRP_URP FOREIGN KEY (USER_ID, GATEWAY_ID)
+ REFERENCES USER_RESOURCE_PROFILE (USER_ID, GATEWAY_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS USER_STORAGE_PREFERENCE (
+ STORAGE_RESOURCE_ID VARCHAR(255) NOT NULL,
+ USER_ID VARCHAR(255) NOT NULL,
+ GATEWAY_ID VARCHAR(255) NOT NULL,
+ RESOURCE_CS_TOKEN VARCHAR(255),
+ FS_ROOT_LOCATION VARCHAR(255),
+ LOGIN_USERNAME VARCHAR(255),
+ PRIMARY KEY (STORAGE_RESOURCE_ID, USER_ID, GATEWAY_ID),
+ CONSTRAINT FK_USP_URP FOREIGN KEY (USER_ID, GATEWAY_ID)
+ REFERENCES USER_RESOURCE_PROFILE (USER_ID, GATEWAY_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS PARSER (
+ PARSER_ID VARCHAR(255) NOT NULL,
+ IMAGE_NAME VARCHAR(255),
+ OUTPUT_DIR_PATH VARCHAR(255),
+ INPUT_DIR_PATH VARCHAR(255),
+ EXECUTION_COMMAND VARCHAR(255),
+ GATEWAY_ID VARCHAR(255),
+ PRIMARY KEY (PARSER_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS PARSER_INPUT (
+ PARSER_INPUT_ID VARCHAR(255) NOT NULL,
+ PARSER_INPUT_NAME VARCHAR(255),
+ PARSER_INPUT_REQUIRED TINYINT(1),
+ PARSER_ID VARCHAR(255),
+ INPUT_TYPE VARCHAR(255),
+ PRIMARY KEY (PARSER_INPUT_ID),
+ CONSTRAINT FK_PI_P FOREIGN KEY (PARSER_ID) REFERENCES PARSER (PARSER_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS PARSER_OUTPUT (
+ PARSER_OUTPUT_ID VARCHAR(255) NOT NULL,
+ PARSER_OUTPUT_NAME VARCHAR(255),
+ PARSER_OUTPUT_REQUIRED TINYINT(1),
+ PARSER_ID VARCHAR(255),
+ OUTPUT_TYPE VARCHAR(255),
+ PRIMARY KEY (PARSER_OUTPUT_ID),
+ CONSTRAINT FK_PO_P FOREIGN KEY (PARSER_ID) REFERENCES PARSER (PARSER_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS PARSING_TEMPLATE (
+ PARSING_TEMPLATE_ID VARCHAR(255) NOT NULL,
+ APP_INTERFACE_ID VARCHAR(255),
+ GATEWAY_ID VARCHAR(255),
+ PRIMARY KEY (PARSING_TEMPLATE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS PARSING_TEMPLATE_INPUT (
+ PARSING_TEMPLATE_INPUT_ID VARCHAR(255) NOT NULL,
+ TARGET_PARSER_INPUT_ID VARCHAR(255),
+ APPLICATION_OUTPUT_NAME VARCHAR(255),
+ VALUE VARCHAR(255),
+ PARSING_TEMPLATE_ID VARCHAR(255),
+ PRIMARY KEY (PARSING_TEMPLATE_INPUT_ID),
+ CONSTRAINT FK_PTI_PI FOREIGN KEY (TARGET_PARSER_INPUT_ID) REFERENCES PARSER_INPUT (PARSER_INPUT_ID),
+ CONSTRAINT FK_PTI_PT FOREIGN KEY (PARSING_TEMPLATE_ID) REFERENCES PARSING_TEMPLATE (PARSING_TEMPLATE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS PARSER_CONNECTOR (
+ PARSER_CONNECTOR_ID VARCHAR(255) NOT NULL,
+ PARENT_PARSER_ID VARCHAR(255),
+ CHILD_PARSER_ID VARCHAR(255),
+ PARSING_TEMPLATE_ID VARCHAR(255),
+ PRIMARY KEY (PARSER_CONNECTOR_ID),
+ CONSTRAINT FK_PC3_PP FOREIGN KEY (PARENT_PARSER_ID) REFERENCES PARSER (PARSER_ID),
+ CONSTRAINT FK_PC3_CP FOREIGN KEY (CHILD_PARSER_ID) REFERENCES PARSER (PARSER_ID),
+ CONSTRAINT FK_PC3_PT FOREIGN KEY (PARSING_TEMPLATE_ID) REFERENCES PARSING_TEMPLATE (PARSING_TEMPLATE_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS PARSER_CONNECTOR_INPUT (
+ PARSER_CONNECTOR_INPUT_ID VARCHAR(255) NOT NULL,
+ PARSER_INPUT_ID VARCHAR(255),
+ PARSER_OUTPUT_ID VARCHAR(255),
+ VALUE VARCHAR(255),
+ PARSER_CONNECTOR_ID VARCHAR(255),
+ PRIMARY KEY (PARSER_CONNECTOR_INPUT_ID),
+ CONSTRAINT FK_PCI_PI FOREIGN KEY (PARSER_INPUT_ID) REFERENCES PARSER_INPUT (PARSER_INPUT_ID),
+ CONSTRAINT FK_PCI_PO FOREIGN KEY (PARSER_OUTPUT_ID) REFERENCES PARSER_OUTPUT (PARSER_OUTPUT_ID),
+ CONSTRAINT FK_PCI_PC FOREIGN KEY (PARSER_CONNECTOR_ID) REFERENCES PARSER_CONNECTOR (PARSER_CONNECTOR_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+-- ============================================================================
+-- 3. AIRAVATA WORKFLOW CATALOG
+-- ============================================================================
+
+CREATE TABLE IF NOT EXISTS AIRAVATA_WORKFLOW (
+ ID VARCHAR(255) NOT NULL,
+ EXPERIMENT_ID VARCHAR(255),
+ DESCRIPTION VARCHAR(255),
+ CREATED_AT TIMESTAMP NULL,
+ UPDATED_AT TIMESTAMP NULL,
+ PRIMARY KEY (ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS AIRAVATA_WORKFLOW_STATUS (
+ ID VARCHAR(255) NOT NULL,
+ WORKFLOW_ID VARCHAR(255) NOT NULL,
+ STATE VARCHAR(255),
+ DESCRIPTION VARCHAR(255),
+ UPDATED_AT TIMESTAMP NULL,
+ PRIMARY KEY (ID, WORKFLOW_ID),
+ CONSTRAINT FK_AW_STATUS_WORKFLOW FOREIGN KEY (WORKFLOW_ID) REFERENCES AIRAVATA_WORKFLOW (ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS AIRAVATA_WORKFLOW_ERROR (
+ ERROR_ID VARCHAR(255) NOT NULL,
+ WORKFLOW_ID VARCHAR(255) NOT NULL,
+ CREATION_TIME TIMESTAMP NULL,
+ ACTUAL_ERROR_MESSAGE LONGTEXT,
+ USER_FRIENDLY_MESSAGE LONGTEXT,
+ TRANSIENT_OR_PERSISTENT TINYINT(1) NOT NULL DEFAULT 0,
+ ROOT_CAUSE_ERROR_ID_LIST LONGTEXT,
+ PRIMARY KEY (ERROR_ID, WORKFLOW_ID),
+ CONSTRAINT FK_AW_ERROR_WORKFLOW FOREIGN KEY (WORKFLOW_ID) REFERENCES AIRAVATA_WORKFLOW (ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS WORKFLOW_DATA_BLOCK (
+ ID VARCHAR(255) NOT NULL,
+ WORKFLOW_ID VARCHAR(255),
+ VALUE VARCHAR(255),
+ DATA_TYPE VARCHAR(255),
+ CREATED_AT TIMESTAMP NULL,
+ UPDATED_AT TIMESTAMP NULL,
+ PRIMARY KEY (ID),
+ CONSTRAINT FK_DATA_BLOCK_WORKFLOW FOREIGN KEY (WORKFLOW_ID) REFERENCES AIRAVATA_WORKFLOW (ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS WORKFLOW_HANDLER (
+ ID VARCHAR(255) NOT NULL,
+ WORKFLOW_ID VARCHAR(255) NOT NULL,
+ TYPE VARCHAR(255),
+ CREATED_AT TIMESTAMP NULL,
+ UPDATED_AT TIMESTAMP NULL,
+ PRIMARY KEY (ID, WORKFLOW_ID),
+ CONSTRAINT FK_HANDLER_WORKFLOW FOREIGN KEY (WORKFLOW_ID) REFERENCES AIRAVATA_WORKFLOW (ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS WORKFLOW_APPLICATION (
+ ID VARCHAR(255) NOT NULL,
+ WORKFLOW_ID VARCHAR(255) NOT NULL,
+ PROCESS_ID VARCHAR(255),
+ APPLICATION_INTERFACE_ID VARCHAR(255),
+ COMPUTE_RESOURCE_ID VARCHAR(255),
+ QUEUE_NAME VARCHAR(255),
+ NODE_COUNT INT NOT NULL DEFAULT 0,
+ CORE_COUNT INT NOT NULL DEFAULT 0,
+ WALL_TIME_LIMIT INT NOT NULL DEFAULT 0,
+ PHYSICAL_MEMORY INT NOT NULL DEFAULT 0,
+ CREATED_AT TIMESTAMP NULL,
+ UPDATED_AT TIMESTAMP NULL,
+ PRIMARY KEY (ID, WORKFLOW_ID),
+ CONSTRAINT FK_APPLICATION_WORKFLOW FOREIGN KEY (WORKFLOW_ID) REFERENCES AIRAVATA_WORKFLOW (ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS WORKFLOW_CONNECTION (
+ ID VARCHAR(255) NOT NULL,
+ WORKFLOW_ID VARCHAR(255) NOT NULL,
+ DATA_BLOCK_ID VARCHAR(255),
+ FROM_TYPE VARCHAR(255),
+ FROM_ID VARCHAR(255),
+ FROM_OUTPUT_NAME VARCHAR(255),
+ TO_TYPE VARCHAR(255),
+ TO_ID VARCHAR(255),
+ TO_INPUT_NAME VARCHAR(255),
+ CREATED_AT TIMESTAMP NULL,
+ UPDATED_AT TIMESTAMP NULL,
+ PRIMARY KEY (ID, WORKFLOW_ID),
+ CONSTRAINT FK_CONNECTION_WORKFLOW FOREIGN KEY (WORKFLOW_ID) REFERENCES AIRAVATA_WORKFLOW (ID),
+ CONSTRAINT FK_CONNECTION_DATA_BLOCK FOREIGN KEY (DATA_BLOCK_ID) REFERENCES WORKFLOW_DATA_BLOCK (ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS APPLICATION_STATUS (
+ ID VARCHAR(255) NOT NULL,
+ APPLICATION_ID VARCHAR(255) NOT NULL,
+ STATE VARCHAR(255),
+ DESCRIPTION VARCHAR(255),
+ UPDATED_AT TIMESTAMP NULL,
+ PRIMARY KEY (ID, APPLICATION_ID),
+ CONSTRAINT FK_APP_STATUS_APPLICATION FOREIGN KEY (APPLICATION_ID) REFERENCES WORKFLOW_APPLICATION (ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS APPLICATION_ERROR (
+ ERROR_ID VARCHAR(255) NOT NULL,
+ APPLICATION_ID VARCHAR(255) NOT NULL,
+ CREATION_TIME TIMESTAMP NULL,
+ ACTUAL_ERROR_MESSAGE LONGTEXT,
+ USER_FRIENDLY_MESSAGE LONGTEXT,
+ TRANSIENT_OR_PERSISTENT TINYINT(1) NOT NULL DEFAULT 0,
+ ROOT_CAUSE_ERROR_ID_LIST LONGTEXT,
+ PRIMARY KEY (ERROR_ID, APPLICATION_ID),
+ CONSTRAINT FK_APP_ERROR_APPLICATION FOREIGN KEY (APPLICATION_ID) REFERENCES WORKFLOW_APPLICATION (ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS HANDLER_STATUS (
+ ID VARCHAR(255) NOT NULL,
+ HANDLER_ID VARCHAR(255) NOT NULL,
+ WORKFLOW_ID VARCHAR(255) NOT NULL,
+ STATE VARCHAR(255),
+ DESCRIPTION VARCHAR(255),
+ UPDATED_AT TIMESTAMP NULL,
+ PRIMARY KEY (ID, HANDLER_ID),
+ CONSTRAINT FK_HANDLER_STATUS_HANDLER FOREIGN KEY (HANDLER_ID, WORKFLOW_ID)
+ REFERENCES WORKFLOW_HANDLER (ID, WORKFLOW_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS HANDLER_ERROR (
+ ERROR_ID VARCHAR(255) NOT NULL,
+ HANDLER_ID VARCHAR(255) NOT NULL,
+ WORKFLOW_ID VARCHAR(255) NOT NULL,
+ CREATION_TIME TIMESTAMP NULL,
+ ACTUAL_ERROR_MESSAGE LONGTEXT,
+ USER_FRIENDLY_MESSAGE LONGTEXT,
+ TRANSIENT_OR_PERSISTENT TINYINT(1) NOT NULL DEFAULT 0,
+ ROOT_CAUSE_ERROR_ID_LIST LONGTEXT,
+ PRIMARY KEY (ERROR_ID, HANDLER_ID),
+ CONSTRAINT FK_HANDLER_ERROR_HANDLER FOREIGN KEY (HANDLER_ID, WORKFLOW_ID)
+ REFERENCES WORKFLOW_HANDLER (ID, WORKFLOW_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS HANDLER_INPUT (
+ HANDLER_ID VARCHAR(255) NOT NULL,
+ NAME VARCHAR(255) NOT NULL,
+ WORKFLOW_ID VARCHAR(255) NOT NULL,
+ VALUE LONGTEXT,
+ TYPE VARCHAR(255),
+ APPLICATION_ARGUMENT VARCHAR(255),
+ STANDARD_INPUT TINYINT(1) NOT NULL DEFAULT 0,
+ USER_FRIENDLY_DESCRIPTION VARCHAR(255),
+ METADATA VARCHAR(4096),
+ INPUT_ORDER INT NOT NULL DEFAULT 0,
+ IS_REQUIRED TINYINT(1) NOT NULL DEFAULT 0,
+ REQUIRED_TO_ADDED_TO_COMMAND_LINE TINYINT(1) NOT NULL DEFAULT 0,
+ DATA_STAGED TINYINT(1) NOT NULL DEFAULT 0,
+ STORAGE_RESOURCE_ID VARCHAR(255),
+ IS_READ_ONLY TINYINT(1) NOT NULL DEFAULT 0,
+ PRIMARY KEY (HANDLER_ID, NAME),
+ CONSTRAINT FK_HANDLER_INPUT_HANDLER FOREIGN KEY (HANDLER_ID, WORKFLOW_ID)
+ REFERENCES WORKFLOW_HANDLER (ID, WORKFLOW_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS HANDLER_OUTPUT (
+ HANDLER_ID VARCHAR(255) NOT NULL,
+ NAME VARCHAR(255) NOT NULL,
+ WORKFLOW_ID VARCHAR(255) NOT NULL,
+ VALUE LONGTEXT,
+ TYPE VARCHAR(255),
+ APPLICATION_ARGUMENT VARCHAR(255),
+ IS_REQUIRED TINYINT(1) NOT NULL DEFAULT 0,
+ REQUIRED_TO_ADDED_TO_COMMAND_LINE TINYINT(1) NOT NULL DEFAULT 0,
+ DATA_MOVEMENT TINYINT(1) NOT NULL DEFAULT 0,
+ LOCATION VARCHAR(255),
+ SEARCH_QUERY VARCHAR(255),
+ OUTPUT_STREAMING TINYINT(1) NOT NULL DEFAULT 0,
+ STORAGE_RESOURCE_ID VARCHAR(255),
+ PRIMARY KEY (HANDLER_ID, NAME),
+ CONSTRAINT FK_HANDLER_OUTPUT_HANDLER FOREIGN KEY (HANDLER_ID, WORKFLOW_ID)
+ REFERENCES WORKFLOW_HANDLER (ID, WORKFLOW_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+-- ============================================================================
+-- 4. REPLICA CATALOG
+-- ============================================================================
+
+CREATE TABLE IF NOT EXISTS CONFIGURATION (
+ CONFIG_KEY VARCHAR(255) NOT NULL,
+ CONFIG_VAL VARCHAR(255) NOT NULL,
+ PRIMARY KEY (CONFIG_KEY, CONFIG_VAL)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS DATA_PRODUCT (
+ PRODUCT_URI VARCHAR(255) NOT NULL,
+ GATEWAY_ID VARCHAR(255),
+ PRODUCT_NAME LONGTEXT,
+ PRODUCT_DESCRIPTION VARCHAR(255),
+ OWNER_NAME VARCHAR(255),
+ PARENT_PRODUCT_URI VARCHAR(255),
+ PRODUCT_SIZE INT NOT NULL DEFAULT 0,
+ CREATION_TIME TIMESTAMP NULL,
+ LAST_MODIFIED_TIME TIMESTAMP NULL,
+ PRODUCT_TYPE VARCHAR(255),
+ PRIMARY KEY (PRODUCT_URI)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS DATA_PRODUCT_METADATA (
+ PRODUCT_URI VARCHAR(255) NOT NULL,
+ METADATA_KEY VARCHAR(255) NOT NULL,
+ METADATA_VALUE VARCHAR(255),
+ PRIMARY KEY (PRODUCT_URI, METADATA_KEY),
+ CONSTRAINT FK_DATA_PRODUCT_METADATA_PRODUCT FOREIGN KEY (PRODUCT_URI) REFERENCES DATA_PRODUCT (PRODUCT_URI)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS DATA_REPLICA_LOCATION (
+ REPLICA_ID VARCHAR(255) NOT NULL,
+ PRODUCT_URI VARCHAR(255) NOT NULL,
+ REPLICA_NAME LONGTEXT,
+ REPLICA_DESCRIPTION VARCHAR(255),
+ STORAGE_RESOURCE_ID VARCHAR(255),
+ FILE_PATH VARCHAR(255),
+ CREATION_TIME TIMESTAMP NULL,
+ LAST_MODIFIED_TIME TIMESTAMP NULL,
+ VALID_UNTIL_TIME TIMESTAMP NULL,
+ REPLICA_LOCATION_CATEGORY VARCHAR(255),
+ REPLICA_PERSISTENT_TYPE VARCHAR(255),
+ PRIMARY KEY (REPLICA_ID),
+ CONSTRAINT FK_DATA_REPLICA_PRODUCT FOREIGN KEY (PRODUCT_URI) REFERENCES DATA_PRODUCT (PRODUCT_URI)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS DATA_REPLICA_METADATA (
+ REPLICA_ID VARCHAR(255) NOT NULL,
+ METADATA_KEY VARCHAR(255) NOT NULL,
+ METADATA_VALUE VARCHAR(255),
+ PRIMARY KEY (REPLICA_ID, METADATA_KEY),
+ CONSTRAINT FK_DATA_REPLICA_METADATA_REPLICA FOREIGN KEY (REPLICA_ID) REFERENCES DATA_REPLICA_LOCATION (REPLICA_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+-- ============================================================================
+-- 5. SHARING REGISTRY
+-- ============================================================================
+
+CREATE TABLE IF NOT EXISTS DOMAIN (
+ DOMAIN_ID VARCHAR(255) NOT NULL,
+ NAME VARCHAR(255),
+ DESCRIPTION VARCHAR(255),
+ CREATED_TIME BIGINT,
+ UPDATED_TIME BIGINT,
+ INITIAL_USER_GROUP_ID VARCHAR(255),
+ PRIMARY KEY (DOMAIN_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS SHARING_USER (
+ USER_ID VARCHAR(255) NOT NULL,
+ DOMAIN_ID VARCHAR(255) NOT NULL,
+ USER_NAME VARCHAR(255),
+ FIRST_NAME VARCHAR(255),
+ LAST_NAME VARCHAR(255),
+ EMAIL VARCHAR(255),
+ ICON LONGBLOB,
+ CREATED_TIME BIGINT,
+ UPDATED_TIME BIGINT,
+ PRIMARY KEY (USER_ID, DOMAIN_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS USER_GROUP (
+ GROUP_ID VARCHAR(255) NOT NULL,
+ DOMAIN_ID VARCHAR(255) NOT NULL,
+ NAME VARCHAR(255),
+ DESCRIPTION VARCHAR(255),
+ OWNER_ID VARCHAR(255),
+ GROUP_TYPE VARCHAR(255),
+ GROUP_CARDINALITY VARCHAR(255),
+ CREATED_TIME BIGINT,
+ UPDATED_TIME BIGINT,
+ PRIMARY KEY (GROUP_ID, DOMAIN_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS GROUP_ADMIN (
+ GROUP_ID VARCHAR(255) NOT NULL,
+ DOMAIN_ID VARCHAR(255) NOT NULL,
+ ADMIN_ID VARCHAR(255) NOT NULL,
+ PRIMARY KEY (GROUP_ID, DOMAIN_ID, ADMIN_ID),
+ CONSTRAINT FK_GROUP_ADMIN_USER_GROUP FOREIGN KEY (GROUP_ID, DOMAIN_ID)
+ REFERENCES USER_GROUP (GROUP_ID, DOMAIN_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS GROUP_MEMBERSHIP (
+ PARENT_ID VARCHAR(255) NOT NULL,
+ CHILD_ID VARCHAR(255) NOT NULL,
+ DOMAIN_ID VARCHAR(255) NOT NULL,
+ CHILD_TYPE VARCHAR(255),
+ CREATED_TIME BIGINT,
+ UPDATED_TIME BIGINT,
+ PRIMARY KEY (PARENT_ID, CHILD_ID, DOMAIN_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS ENTITY_TYPE (
+ ENTITY_TYPE_ID VARCHAR(255) NOT NULL,
+ DOMAIN_ID VARCHAR(255) NOT NULL,
+ NAME VARCHAR(255),
+ DESCRIPTION VARCHAR(255),
+ CREATED_TIME BIGINT,
+ UPDATED_TIME BIGINT,
+ PRIMARY KEY (ENTITY_TYPE_ID, DOMAIN_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS PERMISSION_TYPE (
+ PERMISSION_TYPE_ID VARCHAR(255) NOT NULL,
+ DOMAIN_ID VARCHAR(255) NOT NULL,
+ NAME VARCHAR(255),
+ DESCRIPTION VARCHAR(255),
+ CREATED_TIME BIGINT,
+ UPDATED_TIME BIGINT,
+ PRIMARY KEY (PERMISSION_TYPE_ID, DOMAIN_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS ENTITY (
+ ENTITY_ID VARCHAR(255) NOT NULL,
+ DOMAIN_ID VARCHAR(255) NOT NULL,
+ ENTITY_TYPE_ID VARCHAR(255),
+ OWNER_ID VARCHAR(255),
+ PARENT_ENTITY_ID VARCHAR(255),
+ NAME VARCHAR(255),
+ DESCRIPTION VARCHAR(255),
+ BINARY_DATA LONGBLOB,
+ FULL_TEXT VARCHAR(255),
+ ORIGINAL_ENTITY_CREATION_TIME BIGINT,
+ SHARED_COUNT BIGINT,
+ CREATED_TIME BIGINT,
+ UPDATED_TIME BIGINT,
+ PRIMARY KEY (ENTITY_ID, DOMAIN_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS SHARING (
+ PERMISSION_TYPE_ID VARCHAR(152) NOT NULL,
+ ENTITY_ID VARCHAR(152) NOT NULL,
+ GROUP_ID VARCHAR(152) NOT NULL,
+ INHERITED_PARENT_ID VARCHAR(152) NOT NULL,
+ DOMAIN_ID VARCHAR(152) NOT NULL,
+ SHARING_TYPE VARCHAR(255),
+ CREATED_TIME BIGINT,
+ UPDATED_TIME BIGINT,
+ PRIMARY KEY (PERMISSION_TYPE_ID, ENTITY_ID, GROUP_ID, INHERITED_PARENT_ID, DOMAIN_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+-- ============================================================================
+-- 6. PROFILE SERVICE
+-- ============================================================================
+
+CREATE TABLE IF NOT EXISTS TENANT_GATEWAY (
+ AIRAVATA_INTERNAL_GATEWAY_ID VARCHAR(255) NOT NULL,
+ GATEWAY_ID VARCHAR(255),
+ GATEWAY_NAME VARCHAR(255),
+ GATEWAY_DOMAIN VARCHAR(255),
+ EMAIL_ADDRESS VARCHAR(255),
+ GATEWAY_APPROVAL_STATUS VARCHAR(255),
+ GATEWAY_ACRONYM VARCHAR(255),
+ GATEWAY_URL VARCHAR(255),
+ GATEWAY_PUBLIC_ABSTRACT VARCHAR(255),
+ GATEWAY_REVIEW_PROPOSAL_DESCRIPTION VARCHAR(255),
+ GATEWAY_ADMIN_FIRST_NAME VARCHAR(255),
+ GATEWAY_ADMIN_LAST_NAME VARCHAR(255),
+ GATEWAY_ADMIN_EMAIL VARCHAR(255),
+ IDENTITY_SERVER_USERNAME VARCHAR(255),
+ IDENTITY_SERVER_PASSWORD_TOKEN VARCHAR(255),
+ DECLINED_REASON VARCHAR(255),
+ OAUTH_CLIENT_ID VARCHAR(255),
+ OAUTH_CLIENT_SECRET VARCHAR(255),
+ REQUEST_CREATION_TIME BIGINT NOT NULL DEFAULT 0,
+ REQUESTER_USERNAME VARCHAR(255),
+ PRIMARY KEY (AIRAVATA_INTERNAL_GATEWAY_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS USER_PROFILE (
+ AIRAVATA_INTERNAL_USER_ID VARCHAR(255) NOT NULL,
+ USER_ID VARCHAR(255),
+ GATEWAY_ID VARCHAR(255),
+ USER_MODEL_VERSION VARCHAR(255),
+ FIRST_NAME VARCHAR(255),
+ LAST_NAME VARCHAR(255),
+ MIDDLE_NAME VARCHAR(255),
+ NAME_PREFIX VARCHAR(255),
+ NAME_SUFFIX VARCHAR(255),
+ ORCID_ID VARCHAR(255),
+ COUNTRY VARCHAR(255),
+ HOME_ORGANIZATION VARCHAR(255),
+ ORIGINATION_AFFILIATION VARCHAR(255),
+ CREATION_TIME DATETIME NULL,
+ LAST_ACCESS_TIME DATETIME NULL,
+ VALID_UNTIL DATETIME NULL,
+ STATE VARCHAR(255),
+ COMMENTS LONGTEXT,
+ GPG_KEY LONGTEXT,
+ TIME_ZONE VARCHAR(255),
+ PRIMARY KEY (AIRAVATA_INTERNAL_USER_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS USER_PROFILE_EMAIL (
+ AIRAVATA_INTERNAL_USER_ID VARCHAR(255) NOT NULL,
+ EMAIL VARCHAR(255),
+ CONSTRAINT FK_USER_PROFILE_EMAIL FOREIGN KEY (AIRAVATA_INTERNAL_USER_ID)
+ REFERENCES USER_PROFILE (AIRAVATA_INTERNAL_USER_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS USER_PROFILE_PHONE (
+ AIRAVATA_INTERNAL_USER_ID VARCHAR(255) NOT NULL,
+ PHONE VARCHAR(255),
+ CONSTRAINT FK_USER_PROFILE_PHONE FOREIGN KEY (AIRAVATA_INTERNAL_USER_ID)
+ REFERENCES USER_PROFILE (AIRAVATA_INTERNAL_USER_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS USER_PROFILE_NATIONALITY (
+ AIRAVATA_INTERNAL_USER_ID VARCHAR(255) NOT NULL,
+ NATIONALITY VARCHAR(255),
+ CONSTRAINT FK_USER_PROFILE_NATIONALITY FOREIGN KEY (AIRAVATA_INTERNAL_USER_ID)
+ REFERENCES USER_PROFILE (AIRAVATA_INTERNAL_USER_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS USER_PROFILE_LABELED_URI (
+ AIRAVATA_INTERNAL_USER_ID VARCHAR(255) NOT NULL,
+ LABELED_URI VARCHAR(255),
+ CONSTRAINT FK_USER_PROFILE_LABELED_URI FOREIGN KEY (AIRAVATA_INTERNAL_USER_ID)
+ REFERENCES USER_PROFILE (AIRAVATA_INTERNAL_USER_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS NSF_DEMOGRAPHIC (
+ AIRAVATA_INTERNAL_USER_ID VARCHAR(255) NOT NULL,
+ GENDER VARCHAR(255),
+ PRIMARY KEY (AIRAVATA_INTERNAL_USER_ID),
+ CONSTRAINT FK_NSF_DEMOGRAPHIC_USER_PROFILE FOREIGN KEY (AIRAVATA_INTERNAL_USER_ID)
+ REFERENCES USER_PROFILE (AIRAVATA_INTERNAL_USER_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS NSF_DEMOGRAPHIC_ETHNICITY (
+ AIRAVATA_INTERNAL_USER_ID VARCHAR(255) NOT NULL,
+ ETHNICITY VARCHAR(255),
+ CONSTRAINT FK_NSF_ETHNICITY FOREIGN KEY (AIRAVATA_INTERNAL_USER_ID)
+ REFERENCES NSF_DEMOGRAPHIC (AIRAVATA_INTERNAL_USER_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS NSF_DEMOGRAPHIC_RACE (
+ AIRAVATA_INTERNAL_USER_ID VARCHAR(255) NOT NULL,
+ RACE VARCHAR(255),
+ CONSTRAINT FK_NSF_RACE FOREIGN KEY (AIRAVATA_INTERNAL_USER_ID)
+ REFERENCES NSF_DEMOGRAPHIC (AIRAVATA_INTERNAL_USER_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS NSF_DEMOGRAPHIC_DISABILITY (
+ AIRAVATA_INTERNAL_USER_ID VARCHAR(255) NOT NULL,
+ DISABILITY VARCHAR(255),
+ CONSTRAINT FK_NSF_DISABILITY FOREIGN KEY (AIRAVATA_INTERNAL_USER_ID)
+ REFERENCES NSF_DEMOGRAPHIC (AIRAVATA_INTERNAL_USER_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS CUSTOMIZED_DASHBOARD (
+ AIRAVATA_INTERNAL_USER_ID VARCHAR(255) NOT NULL,
+ ENABLED_EXPERIMENT_ID VARCHAR(255),
+ ENABLED_NAME VARCHAR(255),
+ ENABLED_DESCRIPTION VARCHAR(255),
+ ENABLED_PROJECT VARCHAR(255),
+ ENABLED_OWNER VARCHAR(255),
+ ENABLED_APPLICATION VARCHAR(255),
+ ENABLED_COMPUTE_RESOURCE VARCHAR(255),
+ ENABLED_JOB_NAME VARCHAR(255),
+ ENABLED_JOB_ID VARCHAR(255),
+ ENABLED_JOB_STATUS VARCHAR(255),
+ ENABLED_JOB_CREATION_TIME VARCHAR(255),
+ ENABLED_NOTIFICATIONS_TO VARCHAR(255),
+ ENABLED_WORKING_DIR VARCHAR(255),
+ ENABLED_JOB_DESCRIPTION VARCHAR(255),
+ ENABLED_CREATION_TIME VARCHAR(255),
+ ENABLED_LAST_MODIFIED_TIME VARCHAR(255),
+ ENABLED_WALL_TIME VARCHAR(255),
+ ENABLED_CPU_COUNT VARCHAR(255),
+ ENABLED_NODE_COUNT VARCHAR(255),
+ ENABLED_QUEUE VARCHAR(255),
+ ENABLED_INPUTS VARCHAR(255),
+ ENABLED_OUTPUTS VARCHAR(255),
+ ENABLED_STORAGE_DIR VARCHAR(255),
+ ENABLED_ERRORS VARCHAR(255),
+ PRIMARY KEY (AIRAVATA_INTERNAL_USER_ID),
+ CONSTRAINT FK_CUSTOMIZED_DASHBOARD_USER_PROFILE FOREIGN KEY (AIRAVATA_INTERNAL_USER_ID)
+ REFERENCES USER_PROFILE (AIRAVATA_INTERNAL_USER_ID)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+-- ============================================================================
+-- 7. RESEARCH SERVICE
+-- ============================================================================
+
+CREATE TABLE IF NOT EXISTS resource (
+ id VARCHAR(48) NOT NULL,
+ name VARCHAR(255) NOT NULL,
+ description TEXT NOT NULL,
+ header_image VARCHAR(255) NOT NULL,
+ status VARCHAR(255) NOT NULL,
+ state VARCHAR(255) NOT NULL,
+ privacy VARCHAR(255) NOT NULL,
+ created_at DATETIME(6) NOT NULL,
+ updated_at DATETIME(6) NOT NULL,
+ PRIMARY KEY (id)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS resource_authors (
+ resource_id VARCHAR(48) NOT NULL,
+ author_id VARCHAR(255),
+ CONSTRAINT FK_resource_authors_resource FOREIGN KEY (resource_id) REFERENCES resource (id)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS tag (
+ id VARCHAR(48) NOT NULL,
+ value VARCHAR(255) NOT NULL,
+ PRIMARY KEY (id)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS resource_tags (
+ resource_id VARCHAR(48) NOT NULL,
+ tag_id VARCHAR(48) NOT NULL,
+ PRIMARY KEY (resource_id, tag_id),
+ CONSTRAINT FK_resource_tags_resource FOREIGN KEY (resource_id) REFERENCES resource (id),
+ CONSTRAINT FK_resource_tags_tag FOREIGN KEY (tag_id) REFERENCES tag (id)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS repository_resource (
+ id VARCHAR(48) NOT NULL,
+ repository_url VARCHAR(255) NOT NULL,
+ PRIMARY KEY (id),
+ CONSTRAINT FK_repository_resource_base FOREIGN KEY (id) REFERENCES resource (id)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS dataset_resource (
+ id VARCHAR(48) NOT NULL,
+ dataset_url VARCHAR(255) NOT NULL,
+ PRIMARY KEY (id),
+ CONSTRAINT FK_dataset_resource_base FOREIGN KEY (id) REFERENCES resource (id)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS model_resource (
+ id VARCHAR(48) NOT NULL,
+ application_interface_id VARCHAR(255) NOT NULL,
+ version VARCHAR(255) NOT NULL,
+ PRIMARY KEY (id),
+ CONSTRAINT FK_model_resource_base FOREIGN KEY (id) REFERENCES resource (id)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS notebook_resource (
+ id VARCHAR(48) NOT NULL,
+ notebook_path VARCHAR(255) NOT NULL,
+ PRIMARY KEY (id),
+ CONSTRAINT FK_notebook_resource_base FOREIGN KEY (id) REFERENCES resource (id)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS resource_star (
+ id VARCHAR(48) NOT NULL,
+ user_id VARCHAR(255) NOT NULL,
+ resource_id VARCHAR(48) NOT NULL,
+ PRIMARY KEY (id),
+ CONSTRAINT FK_resource_star_resource FOREIGN KEY (resource_id) REFERENCES resource (id)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS research_project (
+ id VARCHAR(48) NOT NULL,
+ name VARCHAR(255) NOT NULL,
+ owner_id VARCHAR(255) NOT NULL,
+ repository_resource_id VARCHAR(48) NOT NULL,
+ created_at DATETIME(6) NOT NULL,
+ updated_at DATETIME(6) NOT NULL,
+ state VARCHAR(255) NOT NULL,
+ PRIMARY KEY (id),
+ CONSTRAINT FK_research_project_repository FOREIGN KEY (repository_resource_id) REFERENCES repository_resource (id)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS project_dataset (
+ project_id VARCHAR(48) NOT NULL,
+ dataset_resource_id VARCHAR(48) NOT NULL,
+ PRIMARY KEY (project_id, dataset_resource_id),
+ CONSTRAINT FK_project_dataset_project FOREIGN KEY (project_id) REFERENCES research_project (id),
+ CONSTRAINT FK_project_dataset_dataset FOREIGN KEY (dataset_resource_id) REFERENCES dataset_resource (id)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS session (
+ id VARCHAR(48) NOT NULL,
+ session_name VARCHAR(255) NOT NULL,
+ user_id VARCHAR(255) NOT NULL,
+ project_id VARCHAR(48) NOT NULL,
+ created_at DATETIME(6) NOT NULL,
+ updated_at DATETIME(6) NOT NULL,
+ status VARCHAR(255) NOT NULL,
+ PRIMARY KEY (id),
+ CONSTRAINT FK_session_project FOREIGN KEY (project_id) REFERENCES research_project (id)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+-- ============================================================================
+-- 8. AGENT SERVICE
+-- ============================================================================
+
+CREATE TABLE IF NOT EXISTS agent_deployment_info (
+ agent_deployment_info_id VARCHAR(255) NOT NULL,
+ user_frinedly_name VARCHAR(255),
+ compute_resource_id VARCHAR(255),
+ agent_application_id VARCHAR(255),
+ PRIMARY KEY (agent_deployment_info_id),
+ UNIQUE KEY uq_agent_deployment_user_friendly_name (user_frinedly_name)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS agent_execution (
+ agent_execution_id VARCHAR(255) NOT NULL,
+ agent_id VARCHAR(255),
+ airavata_experiment_id VARCHAR(255),
+ PRIMARY KEY (agent_execution_id)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS agent_execution_status (
+ agent_execution_status_id VARCHAR(255) NOT NULL,
+ agent_execution_agent_execution_id VARCHAR(255),
+ updated_time BIGINT NOT NULL,
+ status TINYINT,
+ additional_info VARCHAR(2000),
+ PRIMARY KEY (agent_execution_status_id),
+ CONSTRAINT FK_agent_exec_status_execution FOREIGN KEY (agent_execution_agent_execution_id)
+ REFERENCES agent_execution (agent_execution_id)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+CREATE TABLE IF NOT EXISTS plan (
+ plan_id VARCHAR(255) NOT NULL,
+ user_id VARCHAR(255) NOT NULL,
+ gateway_id VARCHAR(255) NOT NULL,
+ data TEXT,
+ PRIMARY KEY (plan_id)
+) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
+
+-- ============================================================================
+-- END OF BASELINE SCHEMA
+-- ============================================================================
diff --git a/airavata-api/src/main/java/org/apache/airavata/common/utils/DBInitializer.java b/airavata-api/src/main/java/org/apache/airavata/common/utils/DBInitializer.java
index 86e8c0dd06..6dd6fb0e2f 100644
--- a/airavata-api/src/main/java/org/apache/airavata/common/utils/DBInitializer.java
+++ b/airavata-api/src/main/java/org/apache/airavata/common/utils/DBInitializer.java
@@ -19,54 +19,15 @@
*/
package org.apache.airavata.common.utils;
-import java.sql.Connection;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
public class DBInitializer {
private static final Logger logger = LoggerFactory.getLogger(DBInitializer.class);
- private JDBCConfig jdbcConfig;
- private String initScriptPrefix;
- private String checkTableName;
-
- public DBInitializer(JDBCConfig jdbcConfig, String initScriptPrefix, String checkTableName) {
- this.jdbcConfig = jdbcConfig;
- this.initScriptPrefix = initScriptPrefix;
- this.checkTableName = checkTableName;
- }
-
public static void initializeDB(DBInitConfig dbInitConfig) {
-
- JDBCConfig jdbcConfig = dbInitConfig.getJDBCConfig();
- DBInitializer dbInitializer =
- new DBInitializer(jdbcConfig, dbInitConfig.getDBInitScriptPrefix(), dbInitConfig.getCheckTableName());
- dbInitializer.initializeDB();
+ logger.info("Database initialization is now handled by schema migrations. Skipping legacy DB init for: {}",
+ dbInitConfig.getDBInitScriptPrefix());
dbInitConfig.postInit();
}
-
- public void initializeDB() {
- // Create connection
- Connection conn = null;
- try {
- DBUtil dbUtil = new DBUtil(jdbcConfig);
- conn = dbUtil.getConnection();
- if (!DatabaseCreator.isDatabaseStructureCreated(checkTableName, conn)) {
- DatabaseCreator.createRegistryDatabase(initScriptPrefix, conn);
- logger.info("New Database created from " + initScriptPrefix + " !!!");
- } else {
- logger.info("Table " + checkTableName + " already exists. Skipping database init script "
- + initScriptPrefix);
- }
-
- } catch (Exception e) {
- String message = "Failed to initialize database for " + initScriptPrefix;
- logger.error(message, e);
- throw new RuntimeException(message, e);
- } finally {
- if (conn != null) {
- DBUtil.cleanup(conn);
- }
- }
- }
}
diff --git a/airavata-api/src/main/java/org/apache/airavata/common/utils/DatabaseCreator.java b/airavata-api/src/main/java/org/apache/airavata/common/utils/DatabaseCreator.java
deleted file mode 100644
index b6b5aafe98..0000000000
--- a/airavata-api/src/main/java/org/apache/airavata/common/utils/DatabaseCreator.java
+++ /dev/null
@@ -1,381 +0,0 @@
-/**
-*
-* Licensed to the Apache Software Foundation (ASF) under one
-* or more contributor license agreements. See the NOTICE file
-* distributed with this work for additional information
-* regarding copyright ownership. The ASF licenses this file
-* to you under the Apache License, Version 2.0 (the
-* "License"); you may not use this file except in compliance
-* with the License. You may obtain a copy of the License at
-*
-* http://www.apache.org/licenses/LICENSE-2.0
-*
-* Unless required by applicable law or agreed to in writing,
-* software distributed under the License is distributed on an
-* "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
-* KIND, either express or implied. See the License for the
-* specific language governing permissions and limitations
-* under the License.
-*/
-package org.apache.airavata.common.utils;
-
-import java.io.BufferedReader;
-import java.io.IOException;
-import java.io.InputStream;
-import java.io.InputStreamReader;
-import java.sql.Connection;
-import java.sql.DatabaseMetaData;
-import java.sql.ResultSet;
-import java.sql.SQLException;
-import java.sql.SQLWarning;
-import java.sql.Statement;
-import java.util.StringTokenizer;
-import java.util.regex.Matcher;
-import java.util.regex.Pattern;
-import org.slf4j.Logger;
-import org.slf4j.LoggerFactory;
-
-/**
- * This class creates the database tables required for airavata with default configuration this
- * class creates derby database in server mode. User can specify required database in appropriate
- * properties files.
- */
-public class DatabaseCreator {
- private static final Logger logger = LoggerFactory.getLogger(DatabaseCreator.class);
-
- public enum DatabaseType {
- derby("(?i).*derby.*"),
- mysql("(?i).*(mysql|mariadb).*"),
- other("");
-
- private String pattern;
-
- private DatabaseType(String matchingPattern) {
- this.pattern = matchingPattern;
- }
-
- public String getMatchingPattern() {
- return this.pattern;
- }
- }
-
- private static DatabaseType[] supportedDatabase = new DatabaseType[] {DatabaseType.derby, DatabaseType.mysql};
-
- private static Logger log = LoggerFactory.getLogger(DatabaseCreator.class);
- private static final String delimiter = ";";
-
- /**
- * Creates database
- *
- * @throws Exception
- */
- public static void createRegistryDatabase(String prefix, Connection conn) throws Exception {
- createDatabase(prefix, conn);
- }
-
- /**
- * Checks whether database tables are created by using select * on given table name
- *
- * @param tableName
- * Table which should be existed
- * @return <code>true</core> if checkSQL is success, else <code>false</code> .
- */
- public static boolean isDatabaseStructureCreated(String tableName, Connection conn) {
- try {
-
- log.debug("Running a query to test the database tables existence.");
-
- // check whether the tables are already created with a query
- Statement statement = null;
- try {
- statement = conn.createStatement();
- ResultSet rs = statement.executeQuery("select * from " + tableName);
- if (rs != null) {
- rs.close();
- }
- } finally {
- try {
- if (statement != null) {
- statement.close();
- }
- } catch (SQLException e) {
- return false;
- }
- }
- } catch (SQLException e) {
- return false;
- }
-
- return true;
- }
-
- /**
- * executes given sql
- *
- * @param sql
- * @throws Exception
- */
- private static void executeSQL(String sql, Connection conn) throws Exception {
- // Check and ignore empty statements
- if ("".equals(sql.trim())) {
- return;
- }
-
- Statement statement = null;
- try {
- log.debug("SQL : " + sql);
-
- boolean ret;
- int updateCount = 0, updateCountTotal = 0;
- statement = conn.createStatement();
- ret = statement.execute(sql);
- updateCount = statement.getUpdateCount();
- do {
- if (!ret) {
- if (updateCount != -1) {
- updateCountTotal += updateCount;
- }
- }
- ret = statement.getMoreResults();
- if (ret) {
- updateCount = statement.getUpdateCount();
- }
- } while (ret);
-
- log.debug(sql + " : " + updateCountTotal + " rows affected");
-
- SQLWarning warning = conn.getWarnings();
- while (warning != null) {
- log.info(warning + " sql warning");
- warning = warning.getNextWarning();
- }
- conn.clearWarnings();
- } catch (SQLException e) {
- if (e.getSQLState().equals("X0Y32")) {
- // eliminating the table already exception for the derby
- // database
- log.info("Table Already Exists", e);
- } else {
- throw new Exception("Error occurred while executing : " + sql, e);
- }
- } finally {
- if (statement != null) {
- try {
- statement.close();
- } catch (SQLException e) {
- log.error("Error occurred while closing result set.", e);
- }
- }
- }
- }
-
- /**
- * computes relatational database type using database name
- *
- * @return DatabaseType
- * @throws Exception
- *
- */
- public static DatabaseType getDatabaseType(Connection conn) throws Exception {
- try {
- if (conn != null && (!conn.isClosed())) {
- DatabaseMetaData metaData = conn.getMetaData();
- String databaseProductName = metaData.getDatabaseProductName();
- return checkType(databaseProductName);
- }
- } catch (SQLException e) {
- String msg = "Failed to create Airavata database." + e.getMessage();
- log.error(msg, e);
- throw new Exception(msg, e);
- }
- return DatabaseType.other;
- }
-
- /**
- * Overloaded method with String input
- *
- * @return DatabaseType
- * @throws Exception
- *
- */
- public static DatabaseType getDatabaseType(String dbUrl) throws Exception {
- return checkType(dbUrl);
- }
-
- private static DatabaseType checkType(String text) throws Exception {
- try {
- if (text != null) {
- for (DatabaseType type : supportedDatabase) {
- if (text.matches(type.getMatchingPattern())) return type;
- }
- }
- String msg = "Unsupported database: " + text
- + ". Database will not be created automatically by the Airavata. "
- + "Please create the database using appropriate database scripts for " + "the database.";
- throw new Exception(msg);
-
- } catch (SQLException e) {
- String msg = "Failed to create Airavatadatabase." + e.getMessage();
- log.error(msg, e);
- throw new Exception(msg, e);
- }
- }
-
- /**
- * Get scripts location which is prefix + "-" + databaseType + ".sql"
- *
- * @param prefix
- * @param databaseType
- * @return script location
- */
- private static String getScriptLocation(String prefix, DatabaseType databaseType) {
- String scriptName = prefix + "-" + databaseType + ".sql";
- log.debug("Loading database script from :" + scriptName);
- return scriptName;
- }
-
- private static void createDatabase(String prefix, Connection conn) throws Exception {
- Statement statement = null;
- try {
- conn.setAutoCommit(false);
- statement = conn.createStatement();
- executeSQLScript(getScriptLocation(prefix, DatabaseCreator.getDatabaseType(conn)), conn);
- conn.commit();
- log.debug("Tables are created successfully.");
- } catch (SQLException e) {
- String msg = "Failed to create database tables for Airavata resource store. " + e.getMessage();
- log.error(msg, e);
- conn.rollback();
- throw new Exception(msg, e);
- } finally {
- conn.setAutoCommit(true);
- try {
- if (statement != null) {
- statement.close();
- }
- } catch (SQLException e) {
- log.error("Failed to close statement.", e);
- }
- }
- }
-
- private static void executeSQLScript(String dbscriptName, Connection conn) throws Exception {
- StringBuffer sql = new StringBuffer();
- BufferedReader reader = null;
-
- try {
- InputStream is = DatabaseCreator.class.getClassLoader().getResourceAsStream(dbscriptName);
- if (is == null) {
- logger.info("Script file not found at " + dbscriptName + ". Uses default database script file");
- DatabaseType databaseType = DatabaseCreator.getDatabaseType(conn);
- is = DatabaseCreator.class
- .getClassLoader()
- .getResourceAsStream(getDBScriptFileName(databaseType, dbscriptName));
- }
- reader = new BufferedReader(new InputStreamReader(is));
- String line;
- while ((line = reader.readLine()) != null) {
- line = line.trim();
- if (line.startsWith("//")) {
- continue;
- }
- if (line.startsWith("--")) {
- continue;
- }
- StringTokenizer st = new StringTokenizer(line);
- if (st.hasMoreTokens()) {
- String token = st.nextToken();
- if ("REM".equalsIgnoreCase(token)) {
- continue;
- }
- }
- sql.append(" ").append(line);
-
- // SQL defines "--" as a comment to EOL
- // and in Oracle it may contain a hint
- // so we cannot just remove it, instead we must end it
- if (line.indexOf("--") >= 0) {
- sql.append("\n");
- }
- if ((checkStringBufferEndsWith(sql, delimiter))) {
- executeSQL(sql.substring(0, sql.length() - delimiter.length()), conn);
- sql.replace(0, sql.length(), "");
- }
- }
- // Catch any statements not followed by ;
- if (sql.length() > 0) {
- executeSQL(sql.toString(), conn);
- }
- } catch (IOException e) {
- log.error("Error occurred while executing SQL script for creating Airavata database", e);
- throw new Exception("Error occurred while executing SQL script for creating Airavata database", e);
-
- } finally {
- if (reader != null) {
- reader.close();
- }
- }
- }
-
- /**
- * Checks that a string buffer ends up with a given string. It may sound trivial with the existing JDK API but the
- * various implementation among JDKs can make those methods extremely resource intensive and perform poorly due to
- * massive memory allocation and copying. See
- *
- * @param buffer
- * the buffer to perform the check on
- * @param suffix
- * the suffix
- * @return <code>true</code> if the character sequence represented by the argument is a suffix of the character
- * sequence represented by the StringBuffer object; <code>false</code> otherwise. Note that the result will
- * be <code>true</code> if the argument is the empty string.
- */
- public static boolean checkStringBufferEndsWith(StringBuffer buffer, String suffix) {
- if (suffix.length() > buffer.length()) {
- return false;
- }
- // this loop is done on purpose to avoid memory allocation performance
- // problems on various JDKs
- // StringBuffer.lastIndexOf() was introduced in jdk 1.4 and
- // implementation is ok though does allocation/copying
- // StringBuffer.toString().endsWith() does massive memory
- // allocation/copying on JDK 1.5
- // See http://issues.apache.org/bugzilla/show_bug.cgi?id=37169
- int endIndex = suffix.length() - 1;
- int bufferIndex = buffer.length() - 1;
- while (endIndex >= 0) {
- if (buffer.charAt(bufferIndex) != suffix.charAt(endIndex)) {
- return false;
- }
- bufferIndex--;
- endIndex--;
- }
- return true;
- }
-
- /**
- * Method will accept a filepath containing a database script (eg: /user/database_scripts/expcatalog.sql)
- * and return only the filename of the database script (eg: expcatalog.sql).
- * @param databaseType
- * @param scriptFilePath
- * @return
- */
- private static String getDBScriptFileName(DatabaseType databaseType, String scriptFilePath) {
- // pattern: {dir_name}/{scriptfile_name}-{dbtype}.sql".
- // Eg: database_scripts/expcatalog-derby.sql
- final String scriptFilePattern = "(\\w*)(-" + databaseType.toString() + ".sql)";
- final Pattern pattern = Pattern.compile(scriptFilePattern);
- final Matcher matcher = pattern.matcher(scriptFilePath);
- String dbScriptFileName = null;
- // find a match
- if (matcher.find()) {
- dbScriptFileName = matcher.group();
- }
- return dbScriptFileName;
- }
-
- // public static void main(String[] args) throws Exception {
- // System.out.println(DatabaseCreator.getDBScriptFileName(DatabaseType.derby, "db/db/expcatalog-derby.sql"));
- // System.out.println(DatabaseCreator.getDBScriptFileName(DatabaseType.mysql, "/expcatalog-mysql.sql"));
- // }
-}
diff --git a/airavata-api/src/main/java/org/apache/airavata/common/utils/DatabaseTestCases.java b/airavata-api/src/main/java/org/apache/airavata/common/utils/DatabaseTestCases.java
deleted file mode 100644
index 03cb6132fd..0000000000
--- a/airavata-api/src/main/java/org/apache/airavata/common/utils/DatabaseTestCases.java
+++ /dev/null
@@ -1,123 +0,0 @@
-/**
-*
-* Licensed to the Apache Software Foundation (ASF) under one
-* or more contributor license agreements. See the NOTICE file
-* distributed with this work for additional information
-* regarding copyright ownership. The ASF licenses this file
-* to you under the Apache License, Version 2.0 (the
-* "License"); you may not use this file except in compliance
-* with the License. You may obtain a copy of the License at
-*
-* http://www.apache.org/licenses/LICENSE-2.0
-*
-* Unless required by applicable law or agreed to in writing,
-* software distributed under the License is distributed on an
-* "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
-* KIND, either express or implied. See the License for the
-* specific language governing permissions and limitations
-* under the License.
-*/
-package org.apache.airavata.common.utils;
-
-import java.sql.Connection;
-import java.sql.SQLException;
-import org.slf4j.Logger;
-import org.slf4j.LoggerFactory;
-
-/**
- * An abstraction for database specific test classes. This will create a database and provides methods to execute SQLs.
- */
-public class DatabaseTestCases {
-
- private static final Logger logger = LoggerFactory.getLogger(DatabaseTestCases.class);
-
- protected static String hostAddress = "localhost";
- protected static int port = 20000;
- protected static String userName = "admin";
- protected static String password = "admin";
- protected static String driver = "org.apache.derby.jdbc.ClientDriver";
-
- public static String getHostAddress() {
- return hostAddress;
- }
-
- public static int getPort() {
- return port;
- }
-
- public static String getUserName() {
- return userName;
- }
-
- public static String getPassword() {
- return password;
- }
-
- public static String getDriver() {
- return driver;
- }
-
- public static String getJDBCUrl() {
- return new StringBuilder()
- .append("jdbc:derby://")
- .append(getHostAddress())
- .append(":")
- .append(getPort())
- .append("/experiment_catalog;create=true;user=")
- .append(getUserName())
- .append(";password=")
- .append(getPassword())
- .toString();
- }
-
- public static void waitTillServerStarts() {
- DBUtil dbUtil = null;
-
- try {
- dbUtil = new DBUtil(getJDBCUrl(), getUserName(), getPassword(), getDriver());
- } catch (Exception e) {
- // ignore
- }
-
- Connection connection = null;
- try {
- if (dbUtil != null) {
- connection = dbUtil.getConnection();
- }
- } catch (Throwable e) {
- // ignore
- }
-
- while (connection == null) {
- try {
- Thread.sleep(1000);
- try {
- if (dbUtil != null) {
- connection = dbUtil.getConnection();
- }
- } catch (SQLException e) {
- // ignore
- }
- } catch (InterruptedException e) {
- // ignore
- }
- }
- }
-
- public static void executeSQL(String sql) throws Exception {
- DBUtil dbUtil = new DBUtil(getJDBCUrl(), getUserName(), getPassword(), getDriver());
- dbUtil.executeSQL(sql);
- }
-
- public DBUtil getDbUtil() throws Exception {
- return new DBUtil(getJDBCUrl(), getUserName(), getPassword(), getDriver());
- }
-
- public Connection getConnection() throws Exception {
-
- DBUtil dbUtil = getDbUtil();
- Connection connection = dbUtil.getConnection();
- connection.setAutoCommit(true);
- return connection;
- }
-}
diff --git a/airavata-api/src/main/java/org/apache/airavata/registry/core/utils/migration/MappingToolRunner.java b/airavata-api/src/main/java/org/apache/airavata/registry/core/utils/migration/MappingToolRunner.java
deleted file mode 100644
index ed3606ebf1..0000000000
--- a/airavata-api/src/main/java/org/apache/airavata/registry/core/utils/migration/MappingToolRunner.java
+++ /dev/null
@@ -1,65 +0,0 @@
-/**
-*
-* Licensed to the Apache Software Foundation (ASF) under one
-* or more contributor license agreements. See the NOTICE file
-* distributed with this work for additional information
-* regarding copyright ownership. The ASF licenses this file
-* to you under the Apache License, Version 2.0 (the
-* "License"); you may not use this file except in compliance
-* with the License. You may obtain a copy of the License at
-*
-* http://www.apache.org/licenses/LICENSE-2.0
-*
-* Unless required by applicable law or agreed to in writing,
-* software distributed under the License is distributed on an
-* "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
-* KIND, either express or implied. See the License for the
-* specific language governing permissions and limitations
-* under the License.
-*/
-package org.apache.airavata.registry.core.utils.migration;
-
-import org.apache.airavata.common.utils.JDBCConfig;
-import org.apache.airavata.common.utils.JPAUtils;
-import org.apache.openjpa.jdbc.conf.JDBCConfiguration;
-import org.apache.openjpa.jdbc.conf.JDBCConfigurationImpl;
-import org.apache.openjpa.jdbc.meta.MappingTool;
-import org.apache.openjpa.lib.util.Options;
-import org.slf4j.Logger;
-import org.slf4j.LoggerFactory;
-
-public class MappingToolRunner {
-
- private static Logger logger = LoggerFactory.getLogger(MappingToolRunner.class);
-
- public static void run(JDBCConfig jdbcConfig, String outputFile, String persistenceUnitName) {
- run(jdbcConfig, outputFile, persistenceUnitName, MappingTool.ACTION_ADD);
- }
-
- // schemaAction is one of MappingTool's supported actions:
- // http://openjpa.apache.org/builds/2.4.3/apache-openjpa/docs/ref_guide_mapping.html#ref_guide_mapping_mappingtool
- public static void run(JDBCConfig jdbcConfig, String outputFile, String persistenceUnitName, String schemaAction) {
-
- JDBCConfiguration jdbcConfiguration = new JDBCConfigurationImpl();
- jdbcConfiguration.fromProperties(JPAUtils.createConnectionProperties(jdbcConfig));
- jdbcConfiguration.setConnectionDriverName("org.apache.commons.dbcp2.BasicDataSource");
-
- Options options = new Options();
- options.put("sqlFile", outputFile);
- // schemaAction "add" brings the schema up to date by adding missing schema elements
- // schemaAction "build" creates the entire schema as if the database is empty
- options.put("schemaAction", schemaAction);
- options.put("foreignKeys", "true");
- options.put("indexes", "true");
- options.put("primaryKeys", "true");
- // Specify persistence-unit name using it's anchor in the persistence.xml file
- // http://openjpa.apache.org/builds/2.4.3/apache-openjpa/docs/ref_guide_conf_devtools.html
- options.put("properties", "persistence.xml#" + persistenceUnitName);
- try {
- MappingTool.run(jdbcConfiguration, new String[] {}, options, null);
- } catch (Exception mappingToolEx) {
- logger.error("Failed to run MappingTool", mappingToolEx);
- throw new RuntimeException("Failed to run MappingTool to generate migration script", mappingToolEx);
- }
- }
-}
diff --git a/airavata-api/src/main/java/org/apache/airavata/registry/core/utils/migration/MigrationSchemaGenerator.java b/airavata-api/src/main/java/org/apache/airavata/registry/core/utils/migration/MigrationSchemaGenerator.java
deleted file mode 100644
index 5364a3df8f..0000000000
--- a/airavata-api/src/main/java/org/apache/airavata/registry/core/utils/migration/MigrationSchemaGenerator.java
+++ /dev/null
@@ -1,125 +0,0 @@
-/**
-*
-* Licensed to the Apache Software Foundation (ASF) under one
-* or more contributor license agreements. See the NOTICE file
-* distributed with this work for additional information
-* regarding copyright ownership. The ASF licenses this file
-* to you under the Apache License, Version 2.0 (the
-* "License"); you may not use this file except in compliance
-* with the License. You may obtain a copy of the License at
-*
-* http://www.apache.org/licenses/LICENSE-2.0
-*
-* Unless required by applicable law or agreed to in writing,
-* software distributed under the License is distributed on an
-* "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
-* KIND, either express or implied. See the License for the
-* specific language governing permissions and limitations
-* under the License.
-*/
-package org.apache.airavata.registry.core.utils.migration;
-
-import java.sql.Connection;
-import java.sql.DriverManager;
-import java.sql.SQLException;
-import org.apache.airavata.common.utils.DBInitConfig;
-import org.apache.airavata.common.utils.DBInitializer;
-import org.apache.airavata.common.utils.JDBCConfig;
-import org.apache.airavata.registry.core.utils.AppCatalogDBInitConfig;
-import org.apache.airavata.registry.core.utils.ExpCatalogDBInitConfig;
-import org.apache.airavata.registry.core.utils.JPAUtil.AppCatalogJPAUtils;
-import org.apache.airavata.registry.core.utils.JPAUtil.ExpCatalogJPAUtils;
-import org.apache.airavata.registry.core.utils.JPAUtil.RepCatalogJPAUtils;
-import org.apache.airavata.registry.core.utils.ReplicaCatalogDBInitConfig;
-import org.slf4j.Logger;
-import org.slf4j.LoggerFactory;
-
-public class MigrationSchemaGenerator {
-
- private static final Logger logger = LoggerFactory.getLogger(MigrationSchemaGenerator.class);
-
- private enum Database {
- app_catalog(
- new AppCatalogDBInitConfig().setDbInitScriptPrefix("appcatalog"),
- AppCatalogJPAUtils.PERSISTENCE_UNIT_NAME),
- experiment_catalog(
- new ExpCatalogDBInitConfig().setDbInitScriptPrefix("expcatalog"),
- ExpCatalogJPAUtils.PERSISTENCE_UNIT_NAME),
- replica_catalog(
- new ReplicaCatalogDBInitConfig().setDbInitScriptPrefix("replicacatalog"),
- RepCatalogJPAUtils.PERSISTENCE_UNIT_NAME);
-
- private final DBInitConfig dbInitConfig;
- private final String persistenceUnitName;
-
- Database(DBInitConfig dbInitConfig, String persistenceUnitName) {
- this.dbInitConfig = dbInitConfig;
- this.persistenceUnitName = persistenceUnitName;
- }
- }
-
- public static void main(String[] args) throws Exception {
-
- String schemaAction = args.length > 0 ? args[0] : "add";
- try {
- for (Database database : Database.values()) {
-
- waitForDatabaseServer(database.dbInitConfig.getJDBCConfig(), 60);
- try {
- logger.info("initializing database " + database.name());
- DBInitializer.initializeDB(database.dbInitConfig);
- } catch (Exception e) {
-
- logger.error("Failed to initialize database " + database.name(), e);
- } finally {
- String outputFile = "add".equals(schemaAction)
- ? database.name() + "-migration.sql"
- : database.name() + "-schema.sql";
- logger.info("creating database script: " + outputFile);
- MappingToolRunner.run(
- database.dbInitConfig.getJDBCConfig(),
- outputFile,
- database.persistenceUnitName,
- schemaAction);
- }
- }
- } catch (Exception e) {
- logger.error("Failed to create the databases", e);
- throw e;
- }
- }
-
- private static void waitForDatabaseServer(JDBCConfig jdbcConfig, int timeoutSeconds) {
-
- long startTime = System.currentTimeMillis();
- boolean connected = false;
- while (!connected) {
-
- if ((System.currentTimeMillis() - startTime) / 1000 > timeoutSeconds) {
- throw new RuntimeException(
- "Failed to connect to database server after " + timeoutSeconds + " seconds!");
- }
- Connection conn = null;
- try {
- Class.forName(jdbcConfig.getDriver());
- conn = DriverManager.getConnection(jdbcConfig.getURL(), jdbcConfig.getUser(), jdbcConfig.getPassword());
- connected = conn.isValid(10);
- } catch (Exception e) {
- logger.debug("Failed to connect to database: " + e.getMessage() + ", waiting 1 second before retrying");
- try {
- Thread.sleep(1000);
- } catch (InterruptedException e1) {
- logger.warn("Thread sleep interrupted, ignoring");
- }
- } finally {
- if (conn != null) {
- try {
- conn.close();
- } catch (SQLException e) {
- logger.warn("Failed to close connection, ignoring");
- }
- }
- }
- }
- }
-}
diff --git a/airavata-api/src/main/java/org/apache/airavata/service/profile/commons/tenant/entities/GatewayEntity.java b/airavata-api/src/main/java/org/apache/airavata/service/profile/commons/tenant/entities/GatewayEntity.java
index 23bb59950d..dfbdff2512 100644
--- a/airavata-api/src/main/java/org/apache/airavata/service/profile/commons/tenant/entities/GatewayEntity.java
+++ b/airavata-api/src/main/java/org/apache/airavata/service/profile/commons/tenant/entities/GatewayEntity.java
@@ -25,7 +25,7 @@ import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
@Entity
-@Table(name = "GATEWAY")
+@Table(name = "TENANT_GATEWAY")
public class GatewayEntity {
private static final Logger logger = LoggerFactory.getLogger(GatewayEntity.class);
private String airavataInternalGatewayId;
diff --git a/airavata-api/src/main/resources/airavata-server.properties b/airavata-api/src/main/resources/airavata-server.properties
index 8b61b1a7e7..f1b5b3b1a0 100644
--- a/airavata-api/src/main/resources/airavata-server.properties
+++ b/airavata-api/src/main/resources/airavata-server.properties
@@ -20,27 +20,27 @@
airavata.config.dir=.
api.server.monitoring.enabled=true
-api.server.monitoring.host=0.0.0.0
+api.server.monitoring.host=airavata.localhost
api.server.monitoring.port=9097
-apiserver.host=0.0.0.0
+apiserver.host=airavata.localhost
apiserver.port=8930
apiserver.class=org.apache.airavata.api.server.AiravataAPIServer
appcatalog.jdbc.driver=org.mariadb.jdbc.Driver
appcatalog.jdbc.password=123456
-appcatalog.jdbc.url=jdbc:mariadb://airavata.host:13306/app_catalog
+appcatalog.jdbc.url=jdbc:mariadb://airavata.localhost:13306/airavata
appcatalog.jdbc.user=airavata
-appcatalog.validationQuery=SELECT 1 from CONFIGURATION
+appcatalog.validationQuery=SELECT 1
cluster.status.monitoring.enable=false
cluster.status.monitoring.repeat.time=18000
credential.store.jdbc.driver=org.mariadb.jdbc.Driver
credential.store.jdbc.password=123456
-credential.store.jdbc.url=jdbc:mariadb://airavata.host:13306/credential_store
+credential.store.jdbc.url=jdbc:mariadb://airavata.localhost:13306/airavata
credential.store.jdbc.user=airavata
-credential.store.jdbc.validationQuery=SELECT 1 from CONFIGURATION
-credential.store.server.host=localhost
+credential.store.jdbc.validationQuery=SELECT 1
+credential.store.server.host=airavata.localhost
credential.store.server.port=8960
credential.store.class=org.apache.airavata.credential.store.server.CredentialStoreServer
@@ -78,7 +78,7 @@ host.scheduler=org.apache.airavata.orchestrator.core.schedule.DefaultHostSchedul
iam.server.super.admin.password=admin
iam.server.super.admin.username=admin
-iam.server.url=http://airavata.host:18080
+iam.server.url=http://airavata.localhost:18080
in.memory.cache.size=1000
@@ -90,10 +90,10 @@ job.monitor.broker.consumer.group=MonitoringConsumer
job.notification.emailids=
job.notification.enable=true
-job.status.publish.endpoint=http://airavata.host:8082/topics/helix-airavata-mq
+job.status.publish.endpoint=http://airavata.localhost:8082/topics/helix-airavata-mq
job.validators=org.apache.airavata.orchestrator.core.validator.impl.BatchQueueValidator,org.apache.airavata.orchestrator.core.validator.impl.ExperimentStatusValidator
-kafka.broker.url=airavata.host:9092
+kafka.broker.url=airavata.localhost:9092
data.parser.broker.consumer.group=ParsingConsumer
data.parser.topic=parsing-data
@@ -102,7 +102,7 @@ local.data.location=/tmp
metaschedluer.job.scanning.enable=false
-orchestrator.server.host=airavata.host
+orchestrator.server.host=airavata.localhost
orchestrator.server.min.threads=50
orchestrator.server.port=8940
orchestrator=org.apache.airavata.orchestrator.server.OrchestratorServer
@@ -110,32 +110,32 @@ orchestrator=org.apache.airavata.orchestrator.server.OrchestratorServer
data.parser.storage.resource.id=CHANGE_ME
participant.monitoring.enabled=true
-participant.monitoring.host=airavata.host
+participant.monitoring.host=airavata.localhost
participant.monitoring.port=9096
post.workflow.manager.loadbalance.clusters=false
post.workflow.manager.monitoring.enabled=true
-post.workflow.manager.monitoring.host=airavata.host
+post.workflow.manager.monitoring.host=airavata.localhost
post.workflow.manager.monitoring.port=9094
post.workflow.manager.name=AiravataPostWM
pre.workflow.manager.loadbalance.clusters=false
pre.workflow.manager.monitoring.enabled=true
-pre.workflow.manager.monitoring.host=airavata.host
+pre.workflow.manager.monitoring.host=airavata.localhost
pre.workflow.manager.monitoring.port=9093
pre.workflow.manager.name=AiravataPreWM
profile_service.class=org.apache.airavata.service.profile.server.ProfileServiceServer
profile.service.jdbc.driver=org.mariadb.jdbc.Driver
profile.service.jdbc.password=123456
-profile.service.jdbc.url=jdbc:mariadb://airavata.host:13306/profile_service
+profile.service.jdbc.url=jdbc:mariadb://airavata.localhost:13306/airavata
profile.service.jdbc.user=airavata
-profile.service.server.host=airavata.host
+profile.service.server.host=airavata.localhost
profile.service.server.port=8962
profile.service.validationQuery=SELECT 1
# RabbitMQ Settings
-rabbitmq.broker.url=amqp://guest:guest@airavata.host:5672/develop
+rabbitmq.broker.url=amqp://airavata:airavata@airavata.localhost:5672
rabbitmq.experiment.exchange.name=experiment_exchange
rabbitmq.process.exchange.name=process_exchange
rabbitmq.status.exchange.name=status_exchange
@@ -147,28 +147,28 @@ realtime.monitor.broker.topic=helix-airavata-mq
registry.jdbc.driver=org.mariadb.jdbc.Driver
registry.jdbc.password=123456
-registry.jdbc.url=jdbc:mariadb://airavata.host:13306/experiment_catalog
+registry.jdbc.url=jdbc:mariadb://airavata.localhost:13306/airavata
registry.jdbc.user=airavata
-regserver.server.host=localhost
+regserver.server.host=airavata.localhost
regserver.server.min.threads=50
regserver.server.port=8970
regserver=org.apache.airavata.registry.api.service.RegistryAPIServer
replicacatalog.jdbc.driver=org.mariadb.jdbc.Driver
replicacatalog.jdbc.password=123456
-replicacatalog.jdbc.url=jdbc:mariadb://airavata.host:13306/replica_catalog
+replicacatalog.jdbc.url=jdbc:mariadb://airavata.localhost:13306/airavata
replicacatalog.jdbc.user=airavata
-replicacatalog.validationQuery=SELECT 1 from CONFIGURATION
+replicacatalog.validationQuery=SELECT 1
sharing_server=org.apache.airavata.sharing.registry.server.SharingRegistryServer
-sharing.registry.server.host=0.0.0.0
+sharing.registry.server.host=airavata.localhost
sharing.registry.server.port=7878
sharingcatalog.jdbc.driver=org.mariadb.jdbc.Driver
sharingcatalog.jdbc.password=123456
-sharingcatalog.jdbc.url=jdbc:mariadb://airavata.host:13306/sharing_catalog
+sharingcatalog.jdbc.url=jdbc:mariadb://airavata.localhost:13306/airavata
sharingcatalog.jdbc.user=airavata
-sharingcatalog.validationQuery=SELECT 1 from CONFIGURATION
+sharingcatalog.validationQuery=SELECT 1
super.tenant.gatewayId=default
@@ -187,13 +187,13 @@ authz.cache.enabled=true
authz.cache.manager.class=org.apache.airavata.service.security.authzcache.DefaultAuthzCacheManager
security.manager.class=org.apache.airavata.service.security.KeyCloakSecurityManager
-validationQuery=SELECT 1 from CONFIGURATION
+validationQuery=SELECT 1
workflowcatalog.jdbc.driver=org.mariadb.jdbc.Driver
workflowcatalog.jdbc.password=123456
-workflowcatalog.jdbc.url=jdbc:mariadb://airavata.host:13306/workflow_catalog
+workflowcatalog.jdbc.url=jdbc:mariadb://airavata.localhost:13306/airavata
workflowcatalog.jdbc.user=airavata
-workflowcatalog.validationQuery=SELECT 1 from CONFIGURATION
+workflowcatalog.validationQuery=SELECT 1
-zookeeper.server.connection=airavata.host:2181
+zookeeper.server.connection=airavata.localhost:2181
StrictHostKeyChecking=no
\ No newline at end of file
diff --git a/airavata-api/src/main/resources/database_scripts/airavataworkflowcatalog-derby.sql b/airavata-api/src/main/resources/database_scripts/airavataworkflowcatalog-derby.sql
deleted file mode 100644
index bce4bd9734..0000000000
--- a/airavata-api/src/main/resources/database_scripts/airavataworkflowcatalog-derby.sql
+++ /dev/null
@@ -1,212 +0,0 @@
-/*
- *
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements. See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership. The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License. You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied. See the License for the
- * specific language governing permissions and limitations
- * under the License.
- *
- */
-
-CREATE TABLE AIRAVATA_WORKFLOW
-(
- ID VARCHAR (255) NOT NULL,
- EXPERIMENT_ID varchar(255),
- DESCRIPTION VARCHAR (255),
- CREATED_AT timestamp DEFAULT CURRENT_TIMESTAMP,
- UPDATED_AT timestamp,
- PRIMARY KEY (ID)
-);
-
-CREATE TABLE AIRAVATA_WORKFLOW_ERROR
-(
- ID VARCHAR (255) NOT NULL,
- WORKFLOW_ID VARCHAR (255) NOT NULL,
- CREATION_TIME timestamp DEFAULT CURRENT_TIMESTAMP,
- ACTUAL_ERROR_MESSAGE CLOB,
- USER_FRIENDLY_MESSAGE CLOB,
- TRANSIENT_OR_PERSISTENT SMALLINT,
- ROOT_CAUSE_ERROR_ID_LIST CLOB,
- PRIMARY KEY (ID, WORKFLOW_ID),
- FOREIGN KEY (WORKFLOW_ID) REFERENCES AIRAVATA_WORKFLOW(ID) ON DELETE CASCADE
-);
-
-CREATE TABLE AIRAVATA_WORKFLOW_STATUS
-(
- ID VARCHAR (255) NOT NULL,
- WORKFLOW_ID VARCHAR (255) NOT NULL,
- STATE VARCHAR (255) NOT NULL,
- DESCRIPTION VARCHAR (255),
- UPDATED_AT timestamp DEFAULT CURRENT_TIMESTAMP,
- PRIMARY KEY (ID, WORKFLOW_ID),
- FOREIGN KEY (WORKFLOW_ID) REFERENCES AIRAVATA_WORKFLOW(ID) ON DELETE CASCADE
-);
-
-CREATE TABLE WORKFLOW_APPLICATION
-(
- ID VARCHAR (255) NOT NULL,
- WORKFLOW_ID VARCHAR (255) NOT NULL,
- EXPERIMENT_ID varchar(255),
- APPLICATION_INTERFACE_ID VARCHAR (255),
- COMPUTE_RESOURCE_ID VARCHAR (255),
- QUEUE_NAME VARCHAR (255),
- NODE_COUNT INTEGER,
- CORE_COUNT INTEGER,
- WALL_TIME_LIMIT INTEGER,
- PHYSICAL_MEMORY INTEGER,
- CREATED_AT timestamp DEFAULT CURRENT_TIMESTAMP,
- UPDATED_AT timestamp,
- PRIMARY KEY (ID, WORKFLOW_ID),
- FOREIGN KEY (WORKFLOW_ID) REFERENCES AIRAVATA_WORKFLOW(ID) ON DELETE CASCADE
-);
-
-CREATE TABLE APPLICATION_ERROR
-(
- ID VARCHAR (255) NOT NULL,
- WORKFLOW_ID VARCHAR (255) NOT NULL,
- CREATION_TIME timestamp DEFAULT CURRENT_TIMESTAMP,
- ACTUAL_ERROR_MESSAGE CLOB,
- USER_FRIENDLY_MESSAGE CLOB,
- TRANSIENT_OR_PERSISTENT SMALLINT,
- ROOT_CAUSE_ERROR_ID_LIST CLOB,
- PRIMARY KEY (ID, WORKFLOW_ID),
- FOREIGN KEY (WORKFLOW_ID) REFERENCES AIRAVATA_WORKFLOW(ID) ON DELETE CASCADE
-);
-
-CREATE TABLE APPLICATION_STATUS
-(
- ID VARCHAR (255) NOT NULL,
- WORKFLOW_ID VARCHAR (255) NOT NULL,
- STATE VARCHAR (255) NOT NULL,
- DESCRIPTION VARCHAR (255),
- UPDATED_AT timestamp DEFAULT CURRENT_TIMESTAMP,
- PRIMARY KEY (ID, WORKFLOW_ID),
- FOREIGN KEY (WORKFLOW_ID) REFERENCES AIRAVATA_WORKFLOW(ID) ON DELETE CASCADE
-);
-
-CREATE TABLE WORKFLOW_HANDLER
-(
- ID VARCHAR (255) NOT NULL,
- WORKFLOW_ID VARCHAR (255) NOT NULL,
- TYPE VARCHAR (255),
- CREATED_AT timestamp DEFAULT CURRENT_TIMESTAMP,
- UPDATED_AT timestamp,
- PRIMARY KEY (ID, WORKFLOW_ID),
- FOREIGN KEY (WORKFLOW_ID) REFERENCES AIRAVATA_WORKFLOW(ID) ON DELETE CASCADE
-);
-
-CREATE TABLE HANDLER_ERROR
-(
- ERROR_ID VARCHAR (255) NOT NULL,
- HANDLER_ID VARCHAR (255) NOT NULL,
- WORKFLOW_ID VARCHAR (255) NOT NULL,
- CREATION_TIME timestamp DEFAULT CURRENT_TIMESTAMP,
- ACTUAL_ERROR_MESSAGE CLOB,
- USER_FRIENDLY_MESSAGE CLOB,
- TRANSIENT_OR_PERSISTENT SMALLINT,
- ROOT_CAUSE_ERROR_ID_LIST CLOB,
- PRIMARY KEY (ERROR_ID, HANDLER_ID),
- FOREIGN KEY (WORKFLOW_ID) REFERENCES AIRAVATA_WORKFLOW(ID) ON DELETE CASCADE,
- FOREIGN KEY (HANDLER_ID, WORKFLOW_ID) REFERENCES WORKFLOW_HANDLER(ID, WORKFLOW_ID) ON DELETE CASCADE
-);
-
-CREATE TABLE HANDLER_INPUT (
- HANDLER_ID VARCHAR(255) NOT NULL,
- NAME VARCHAR(255) NOT NULL,
- APPLICATION_ARGUMENT VARCHAR(255),
- DATA_STAGED SMALLINT,
- INPUT_ORDER INTEGER,
- IS_READ_ONLY SMALLINT,
- IS_REQUIRED SMALLINT,
- METADATA VARCHAR(4096),
- REQUIRED_TO_ADDED_TO_COMMAND_LINE SMALLINT,
- STANDARD_INPUT SMALLINT,
- STORAGE_RESOURCE_ID VARCHAR(255),
- TYPE VARCHAR(20),
- USER_FRIENDLY_DESCRIPTION VARCHAR(255),
- VALUE CLOB,
- WORKFLOW_ID VARCHAR(255),
- PRIMARY KEY (HANDLER_ID, NAME),
- FOREIGN KEY (HANDLER_ID, WORKFLOW_ID) REFERENCES WORKFLOW_HANDLER(ID, WORKFLOW_ID) ON DELETE CASCADE
-);
-
-CREATE TABLE HANDLER_OUTPUT (HANDLER_ID VARCHAR(255) NOT NULL,
- NAME VARCHAR(255) NOT NULL,
- APPLICATION_ARGUMENT VARCHAR(255),
- DATA_MOVEMENT SMALLINT,
- IS_REQUIRED SMALLINT,
- LOCATION VARCHAR(255),
- OUTPUT_STREAMING SMALLINT,
- REQUIRED_TO_ADDED_TO_COMMAND_LINE SMALLINT,
- SEARCH_QUERY VARCHAR(255),
- STORAGE_RESOURCE_ID VARCHAR(255),
- TYPE VARCHAR(20),
- VALUE CLOB,
- WORKFLOW_ID VARCHAR(255),
- PRIMARY KEY (HANDLER_ID, NAME),
- FOREIGN KEY (HANDLER_ID, WORKFLOW_ID) REFERENCES WORKFLOW_HANDLER(ID, WORKFLOW_ID) ON DELETE CASCADE
-);
-
-CREATE TABLE HANDLER_STATUS
-(
- ID VARCHAR (255) NOT NULL,
- HANDLER_ID VARCHAR (255) NOT NULL,
- WORKFLOW_ID VARCHAR (255) NOT NULL,
- STATE VARCHAR (255) NOT NULL,
- DESCRIPTION VARCHAR (255),
- UPDATED_AT timestamp DEFAULT CURRENT_TIMESTAMP,
- PRIMARY KEY (HANDLER_ID, ID),
- FOREIGN KEY (HANDLER_ID, WORKFLOW_ID) REFERENCES WORKFLOW_HANDLER(ID, WORKFLOW_ID) ON DELETE CASCADE
-);
-
-CREATE TABLE WORKFLOW_DATA_BLOCK
-(
- ID VARCHAR (255) NOT NULL,
- WORKFLOW_ID VARCHAR (255) NOT NULL,
- VALUE VARCHAR (255),
- DATA_TYPE VARCHAR (255),
- CREATED_AT timestamp DEFAULT CURRENT_TIMESTAMP,
- UPDATED_AT timestamp,
- PRIMARY KEY (ID),
- FOREIGN KEY (WORKFLOW_ID) REFERENCES AIRAVATA_WORKFLOW(ID) ON DELETE CASCADE
-);
-
-CREATE TABLE WORKFLOW_CONNECTION
-(
- ID VARCHAR (255) NOT NULL,
- WORKFLOW_ID VARCHAR (255) NOT NULL,
- DATA_BLOCK_ID VARCHAR (255),
- FROM_TYPE VARCHAR (255),
- FROM_ID VARCHAR (255),
- FROM_OUTPUT_NAME VARCHAR (255),
- TO_TYPE VARCHAR (255),
- TO_ID VARCHAR (255),
- TO_INPUT_NAME VARCHAR (255),
- CREATED_AT timestamp DEFAULT CURRENT_TIMESTAMP,
- UPDATED_AT timestamp,
- PRIMARY KEY (ID, WORKFLOW_ID),
- FOREIGN KEY (WORKFLOW_ID) REFERENCES AIRAVATA_WORKFLOW(ID) ON DELETE CASCADE,
- FOREIGN KEY (DATA_BLOCK_ID) REFERENCES WORKFLOW_DATA_BLOCK(ID) ON DELETE CASCADE
-);
-
-CREATE TABLE CONFIGURATION
-(
- CONFIG_KEY VARCHAR(255),
- CONFIG_VAL VARCHAR(255),
- EXPIRE_DATE TIMESTAMP DEFAULT CURRENT_TIMESTAMP,
- CATEGORY_ID VARCHAR (255),
- PRIMARY KEY(CONFIG_KEY, CONFIG_VAL, CATEGORY_ID)
-);
-
-INSERT INTO CONFIGURATION (CONFIG_KEY, CONFIG_VAL, EXPIRE_DATE, CATEGORY_ID) VALUES('airavata.workflow.version', '0.17', CURRENT_TIMESTAMP ,'SYSTEM');
diff --git a/airavata-api/src/main/resources/database_scripts/appcatalog-mysql.sql b/airavata-api/src/main/resources/database_scripts/appcatalog-mysql.sql
deleted file mode 100644
index 3b59393c86..0000000000
--- a/airavata-api/src/main/resources/database_scripts/appcatalog-mysql.sql
+++ /dev/null
@@ -1,763 +0,0 @@
-/*
- *
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements. See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership. The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License. You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied. See the License for the
- * specific language governing permissions and limitations
- * under the License.
- *
- */
-
-CREATE TABLE COMPUTE_RESOURCE
-(
- RESOURCE_ID VARCHAR (255) NOT NULL,
- HOST_NAME VARCHAR (255) NOT NULL,
- RESOURCE_DESCRIPTION VARCHAR (255),
- CREATION_TIME TIMESTAMP DEFAULT NOW(),
- UPDATE_TIME TIMESTAMP DEFAULT '0000-00-00 00:00:00',
- MAX_MEMORY_NODE INTEGER,
- CPUS_PER_NODE INTEGER,
- DEFAULT_NODE_COUNT INTEGER,
- DEFAULT_CPU_COUNT INTEGER,
- DEFAULT_WALLTIME INTEGER,
- ENABLED SMALLINT,
- GATEWAY_USAGE_REPORTING TINYINT(1),
- GATEWAY_USAGE_MODULE_LOAD_CMD VARCHAR(500),
- GATEWAY_USAGE_EXECUTABLE VARCHAR(255),
- PRIMARY KEY (RESOURCE_ID)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE HOST_ALIAS
-(
- RESOURCE_ID VARCHAR(255) NOT NULL,
- ALIAS VARCHAR(255),
- PRIMARY KEY(RESOURCE_ID,ALIAS),
- FOREIGN KEY (RESOURCE_ID) REFERENCES COMPUTE_RESOURCE(RESOURCE_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE HOST_IPADDRESS
-(
- RESOURCE_ID VARCHAR(255) NOT NULL,
- IP_ADDRESS VARCHAR(255),
- PRIMARY KEY(RESOURCE_ID,IP_ADDRESS),
- FOREIGN KEY (RESOURCE_ID) REFERENCES COMPUTE_RESOURCE(RESOURCE_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE GSISSH_SUBMISSION
-(
- SUBMISSION_ID VARCHAR(255),
- RESOURCE_JOB_MANAGER VARCHAR(255),
- SSH_PORT INTEGER,
- INSTALLED_PATH VARCHAR(255),
- MONITOR_MODE VARCHAR(255),
- PRIMARY KEY(SUBMISSION_ID)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE GSISSH_EXPORT
-(
- SUBMISSION_ID VARCHAR(255) NOT NULL,
- EXPORT VARCHAR(255),
- PRIMARY KEY(SUBMISSION_ID, EXPORT),
- FOREIGN KEY (SUBMISSION_ID) REFERENCES GSISSH_SUBMISSION(SUBMISSION_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE GSISSH_PREJOBCOMMAND
-(
- SUBMISSION_ID VARCHAR(255) NOT NULL,
- COMMAND VARCHAR(255),
- PRIMARY KEY(SUBMISSION_ID, COMMAND),
- FOREIGN KEY (SUBMISSION_ID) REFERENCES GSISSH_SUBMISSION(SUBMISSION_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE GSISSH_POSTJOBCOMMAND
-(
- SUBMISSION_ID VARCHAR(255) NOT NULL,
- COMMAND VARCHAR(255),
- PRIMARY KEY(SUBMISSION_ID, COMMAND),
- FOREIGN KEY (SUBMISSION_ID) REFERENCES GSISSH_SUBMISSION(SUBMISSION_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE GLOBUS_SUBMISSION
-(
- SUBMISSION_ID VARCHAR(255),
- RESOURCE_JOB_MANAGER VARCHAR(255),
- SECURITY_PROTOCAL VARCHAR(255),
- PRIMARY KEY(SUBMISSION_ID)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE UNICORE_SUBMISSION
-(
- SUBMISSION_ID VARCHAR(255),
- SECURITY_PROTOCAL VARCHAR(255),
- UNICORE_ENDPOINT_URL VARCHAR(255),
- PRIMARY KEY(SUBMISSION_ID)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE UNICORE_DATAMOVEMENT
-(
- DATAMOVEMENT_ID VARCHAR(255),
- SECURITY_PROTOCAL VARCHAR(255),
- UNICORE_ENDPOINT_URL VARCHAR(255),
- PRIMARY KEY(DATAMOVEMENT_ID)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE GLOBUS_GK_ENDPOINT
-(
- SUBMISSION_ID VARCHAR(255) NOT NULL,
- ENDPOINT VARCHAR(255),
- PRIMARY KEY(SUBMISSION_ID, ENDPOINT),
- FOREIGN KEY (SUBMISSION_ID) REFERENCES GLOBUS_SUBMISSION(SUBMISSION_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE RESOURCE_JOB_MANAGER
-(
- RESOURCE_JOB_MANAGER_ID VARCHAR (255) NOT NULL,
- PUSH_MONITORING_ENDPOINT VARCHAR (255),
- JOB_MANAGER_BIN_PATH VARCHAR (255),
- RESOURCE_JOB_MANAGER_TYPE VARCHAR (255) NOT NULL,
- CREATION_TIME TIMESTAMP DEFAULT NOW(),
- UPDATE_TIME TIMESTAMP DEFAULT '0000-00-00 00:00:00',
- PRIMARY KEY (RESOURCE_JOB_MANAGER_ID)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE SSH_JOB_SUBMISSION
-(
- RESOURCE_JOB_MANAGER_ID VARCHAR (255) NOT NULL,
- JOB_SUBMISSION_INTERFACE_ID VARCHAR (255) NOT NULL,
- ALTERNATIVE_SSH_HOSTNAME VARCHAR (255),
- SECURITY_PROTOCOL VARCHAR (255) NOT NULL,
- SSH_PORT INTEGER,
- MONITOR_MODE VARCHAR (255),
- CREATION_TIME TIMESTAMP DEFAULT NOW(),
- UPDATE_TIME TIMESTAMP DEFAULT '0000-00-00 00:00:00' ,
- PRIMARY KEY (JOB_SUBMISSION_INTERFACE_ID),
- FOREIGN KEY (RESOURCE_JOB_MANAGER_ID) REFERENCES RESOURCE_JOB_MANAGER(RESOURCE_JOB_MANAGER_ID)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE SCP_DATA_MOVEMENT
-(
- QUEUE_DESCRIPTION VARCHAR (255),
- DATA_MOVEMENT_INTERFACE_ID VARCHAR (255) NOT NULL,
- SECURITY_PROTOCOL VARCHAR (255) NOT NULL,
- ALTERNATIVE_SCP_HOSTNAME VARCHAR (255),
- SSH_PORT INTEGER,
- CREATION_TIME TIMESTAMP DEFAULT NOW(),
- UPDATE_TIME TIMESTAMP DEFAULT '0000-00-00 00:00:00' ,
- PRIMARY KEY (DATA_MOVEMENT_INTERFACE_ID)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE GRIDFTP_DATA_MOVEMENT
-(
- DATA_MOVEMENT_INTERFACE_ID VARCHAR (255) NOT NULL,
- SECURITY_PROTOCOL VARCHAR (255) NOT NULL,
- CREATION_TIME TIMESTAMP DEFAULT NOW(),
- UPDATE_TIME TIMESTAMP DEFAULT '0000-00-00 00:00:00' ,
- PRIMARY KEY (DATA_MOVEMENT_INTERFACE_ID)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE GRIDFTP_ENDPOINT
-(
- ENDPOINT VARCHAR (255) NOT NULL,
- DATA_MOVEMENT_INTERFACE_ID VARCHAR (255) NOT NULL,
- PRIMARY KEY (DATA_MOVEMENT_INTERFACE_ID,ENDPOINT),
- CREATION_TIME TIMESTAMP DEFAULT NOW(),
- UPDATE_TIME TIMESTAMP DEFAULT '0000-00-00 00:00:00' ,
- FOREIGN KEY (DATA_MOVEMENT_INTERFACE_ID) REFERENCES GRIDFTP_DATA_MOVEMENT(DATA_MOVEMENT_INTERFACE_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
---CREATE TABLE JOB_SUBMISSION_PROTOCOL
---(
--- RESOURCE_ID VARCHAR(255),
--- SUBMISSION_ID VARCHAR(255),
--- JOB_TYPE VARCHAR(255),
--- PRIMARY KEY(RESOURCE_ID,SUBMISSION_ID,JOB_TYPE),
--- FOREIGN KEY (RESOURCE_ID) REFERENCES COMPUTE_RESOURCE(RESOURCE_ID) ON DELETE CASCADE
---);
---
---CREATE TABLE DATA_MOVEMENT_PROTOCOL
---(
--- RESOURCE_ID VARCHAR(255),
--- DATA_MOVE_ID VARCHAR(255),
--- DATA_MOVE_TYPE VARCHAR(255),
--- PRIMARY KEY(RESOURCE_ID,DATA_MOVE_ID,DATA_MOVE_TYPE),
--- FOREIGN KEY (RESOURCE_ID) REFERENCES COMPUTE_RESOURCE(RESOURCE_ID) ON DELETE CASCADE
---);
-
-CREATE TABLE APPLICATION_MODULE
-(
- MODULE_ID VARCHAR(255),
- MODULE_NAME VARCHAR(255),
- MODULE_VERSION VARCHAR(255),
- MODULE_DESC VARCHAR(500),
- GATEWAY_ID VARCHAR (255) NOT NULL,
- CREATION_TIME TIMESTAMP DEFAULT NOW() NOT NULL,
- UPDATE_TIME TIMESTAMP DEFAULT '0000-00-00 00:00:00' NOT NULL,
- PRIMARY KEY(MODULE_ID)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE APPLICATION_DEPLOYMENT
-(
- DEPLOYMENT_ID VARCHAR(255),
- APP_MODULE_ID VARCHAR(255) NOT NULL,
- COMPUTE_HOSTID VARCHAR(255) NOT NULL,
- EXECUTABLE_PATH VARCHAR(255),
- PARALLELISM VARCHAR(255),
- APPLICATION_DESC VARCHAR(255),
- ENV_MODULE_LOAD_CMD VARCHAR(255),
- CREATION_TIME TIMESTAMP DEFAULT NOW() NOT NULL,
- UPDATE_TIME TIMESTAMP DEFAULT '0000-00-00 00:00:00' NOT NULL,
- GATEWAY_ID VARCHAR(255) NOT NULL,
- DEFAULT_QUEUE_NAME VARCHAR(255),
- DEFAULT_NODE_COUNT INTEGER,
- DEFAULT_CPU_COUNT INTEGER,
- DEFAULT_WALLTIME INTEGER,
- EDITABLE_BY_USER TINYINT(1),
- PRIMARY KEY(DEPLOYMENT_ID),
- FOREIGN KEY (COMPUTE_HOSTID) REFERENCES COMPUTE_RESOURCE(RESOURCE_ID) ON DELETE CASCADE,
- FOREIGN KEY (APP_MODULE_ID) REFERENCES APPLICATION_MODULE(MODULE_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE MODULE_LOAD_CMD
-(
- CMD VARCHAR (255) NOT NULL,
- APP_DEPLOYMENT_ID VARCHAR (255) NOT NULL,
- COMMAND_ORDER INTEGER,
- PRIMARY KEY (APP_DEPLOYMENT_ID,CMD),
- FOREIGN KEY (APP_DEPLOYMENT_ID) REFERENCES APPLICATION_DEPLOYMENT(DEPLOYMENT_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE PREJOB_COMMAND
-(
- APPDEPLOYMENT_ID VARCHAR(255) NOT NULL,
- COMMAND VARCHAR(255),
- COMMAND_ORDER INTEGER,
- PRIMARY KEY(APPDEPLOYMENT_ID, COMMAND),
- FOREIGN KEY (APPDEPLOYMENT_ID) REFERENCES APPLICATION_DEPLOYMENT(DEPLOYMENT_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE POSTJOB_COMMAND
-(
- APPDEPLOYMENT_ID VARCHAR(255) NOT NULL,
- COMMAND VARCHAR(255),
- COMMAND_ORDER INTEGER,
- PRIMARY KEY(APPDEPLOYMENT_ID, COMMAND),
- FOREIGN KEY (APPDEPLOYMENT_ID) REFERENCES APPLICATION_DEPLOYMENT(DEPLOYMENT_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE LIBRARY_PREPAND_PATH
-(
- DEPLOYMENT_ID VARCHAR(255) NOT NULL,
- NAME VARCHAR(255),
- VALUE VARCHAR(255),
- PRIMARY KEY(DEPLOYMENT_ID, NAME),
- FOREIGN KEY (DEPLOYMENT_ID) REFERENCES APPLICATION_DEPLOYMENT(DEPLOYMENT_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE LIBRARY_APEND_PATH
-(
- DEPLOYMENT_ID VARCHAR(255) NOT NULL,
- NAME VARCHAR(255),
- VALUE VARCHAR(255),
- PRIMARY KEY(DEPLOYMENT_ID, NAME),
- FOREIGN KEY (DEPLOYMENT_ID) REFERENCES APPLICATION_DEPLOYMENT(DEPLOYMENT_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE APP_ENVIRONMENT
-(
- DEPLOYMENT_ID VARCHAR(255) NOT NULL,
- NAME VARCHAR(255),
- VALUE VARCHAR(255),
- ENV_ORDER INTEGER,
- PRIMARY KEY(DEPLOYMENT_ID, NAME),
- FOREIGN KEY (DEPLOYMENT_ID) REFERENCES APPLICATION_DEPLOYMENT(DEPLOYMENT_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE APPLICATION_INTERFACE
-(
- INTERFACE_ID VARCHAR(255),
- APPLICATION_NAME VARCHAR(255),
- APPLICATION_DESCRIPTION VARCHAR(500),
- GATEWAY_ID VARCHAR(255) NOT NULL,
- ARCHIVE_WORKING_DIRECTORY SMALLINT,
- HAS_OPTIONAL_FILE_INPUTS TINYINT(1),
- CLEAN_AFTER_STAGED SMALLINT DEFAULT 0,
- CREATION_TIME TIMESTAMP DEFAULT NOW() NOT NULL,
- UPDATE_TIME TIMESTAMP DEFAULT '0000-00-00 00:00:00' NOT NULL,
- PRIMARY KEY(INTERFACE_ID)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE APP_MODULE_MAPPING
-(
- INTERFACE_ID VARCHAR(255) NOT NULL,
- MODULE_ID VARCHAR(255) NOT NULL,
- PRIMARY KEY(INTERFACE_ID, MODULE_ID),
- FOREIGN KEY (INTERFACE_ID) REFERENCES APPLICATION_INTERFACE(INTERFACE_ID) ON DELETE CASCADE,
- FOREIGN KEY (MODULE_ID) REFERENCES APPLICATION_MODULE(MODULE_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE APPLICATION_INPUT
-(
- INTERFACE_ID VARCHAR(255) NOT NULL,
- INPUT_KEY VARCHAR(255),
- INPUT_VALUE VARCHAR(255),
- DATA_TYPE VARCHAR(255),
- METADATA VARCHAR(4096),
- APP_ARGUMENT VARCHAR(255),
- STANDARD_INPUT SMALLINT,
- USER_FRIENDLY_DESC TEXT,
- INPUT_ORDER INTEGER,
- IS_REQUIRED SMALLINT,
- REQUIRED_TO_COMMANDLINE SMALLINT,
- DATA_STAGED SMALLINT,
- IS_READ_ONLY SMALLINT,
- OVERRIDE_FILENAME VARCHAR(255),
- PRIMARY KEY(INTERFACE_ID,INPUT_KEY),
- FOREIGN KEY (INTERFACE_ID) REFERENCES APPLICATION_INTERFACE(INTERFACE_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE APPLICATION_OUTPUT
-(
- INTERFACE_ID VARCHAR(255) NOT NULL,
- OUTPUT_KEY VARCHAR(255),
- OUTPUT_VALUE VARCHAR(255),
- DATA_TYPE VARCHAR(255),
- IS_REQUIRED SMALLINT,
- REQUIRED_TO_COMMANDLINE SMALLINT,
- DATA_MOVEMENT SMALLINT,
- DATA_NAME_LOCATION VARCHAR(255),
- SEARCH_QUERY VARCHAR(255),
- APP_ARGUMENT VARCHAR(255),
- OUTPUT_STREAMING SMALLINT,
- METADATA VARCHAR(4096),
- PRIMARY KEY(INTERFACE_ID,OUTPUT_KEY),
- FOREIGN KEY (INTERFACE_ID) REFERENCES APPLICATION_INTERFACE(INTERFACE_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE GATEWAY_PROFILE
-(
- GATEWAY_ID VARCHAR(255),
- CREATION_TIME TIMESTAMP DEFAULT NOW(),
- UPDATE_TIME TIMESTAMP DEFAULT '0000-00-00 00:00:00' ,
- CS_TOKEN VARCHAR (255),
- IDENTITY_SERVER_TENANT VARCHAR (255),
- IDENTITY_SERVER_PWD_CRED_TOKEN VARCHAR (255),
- PRIMARY KEY(GATEWAY_ID)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE COMPUTE_RESOURCE_PREFERENCE
-(
- GATEWAY_ID VARCHAR(255) NOT NULL,
- RESOURCE_ID VARCHAR(255) NOT NULL,
- OVERRIDE_BY_AIRAVATA SMALLINT,
- PREFERED_JOB_SUB_PROTOCOL VARCHAR(255),
- PREFERED_DATA_MOVE_PROTOCOL VARCHAR(255),
- PREFERED_BATCH_QUEUE VARCHAR(255),
- SCRATCH_LOCATION VARCHAR(255),
- ALLOCATION_PROJECT_NUMBER VARCHAR(255),
- LOGIN_USERNAME VARCHAR(255),
- RESOURCE_CS_TOKEN VARCHAR(255),
- USAGE_REPORTING_GATEWAY_ID VARCHAR(255),
- QUALITY_OF_SERVICE VARCHAR(255),
- RESERVATION VARCHAR (255),
- RESERVATION_START_TIME timestamp,
- RESERVATION_END_TIME timestamp,
- SSH_ACCOUNT_PROVISIONER VARCHAR(255),
- SSH_ACCOUNT_PROVISIONER_ADDITIONAL_INFO VARCHAR(1000),
- PRIMARY KEY(GATEWAY_ID,RESOURCE_ID),
- FOREIGN KEY (RESOURCE_ID) REFERENCES COMPUTE_RESOURCE(RESOURCE_ID) ON DELETE CASCADE,
- FOREIGN KEY (GATEWAY_ID) REFERENCES GATEWAY_PROFILE(GATEWAY_ID) ON DELETE CASCADE
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE SSH_ACCOUNT_PROVISIONER_CONFIG
-(
- GATEWAY_ID VARCHAR(255) NOT NULL,
- RESOURCE_ID VARCHAR(255) NOT NULL,
- CONFIG_NAME VARCHAR(255) NOT NULL,
- CONFIG_VALUE VARCHAR(255),
- PRIMARY KEY (GATEWAY_ID, RESOURCE_ID, CONFIG_NAME),
- FOREIGN KEY (GATEWAY_ID, RESOURCE_ID) REFERENCES COMPUTE_RESOURCE_PREFERENCE (GATEWAY_ID, RESOURCE_ID) ON DELETE CASCADE
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE BATCH_QUEUE
-(
- COMPUTE_RESOURCE_ID VARCHAR(255) NOT NULL,
- MAX_RUNTIME INTEGER,
- MAX_JOB_IN_QUEUE INTEGER,
- QUEUE_DESCRIPTION VARCHAR(255),
- QUEUE_NAME VARCHAR(255) NOT NULL,
- MAX_PROCESSORS INTEGER,
- MAX_NODES INTEGER,
- MAX_MEMORY INTEGER,
- CPU_PER_NODE INTEGER,
- DEFAULT_NODE_COUNT INTEGER,
- DEFAULT_CPU_COUNT INTEGER,
- DEFAULT_WALLTIME INTEGER,
- QUEUE_SPECIFIC_MACROS VARCHAR(255),
- IS_DEFAULT_QUEUE TINYINT(1),
- PRIMARY KEY (COMPUTE_RESOURCE_ID,QUEUE_NAME),
- FOREIGN KEY (COMPUTE_RESOURCE_ID) REFERENCES COMPUTE_RESOURCE(RESOURCE_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE COMPUTE_RESOURCE_FILE_SYSTEM
-(
- COMPUTE_RESOURCE_ID VARCHAR (255) NOT NULL,
- PATH VARCHAR (255),
- FILE_SYSTEM VARCHAR (255) NOT NULL,
- PRIMARY KEY (COMPUTE_RESOURCE_ID,FILE_SYSTEM),
- FOREIGN KEY (COMPUTE_RESOURCE_ID) REFERENCES COMPUTE_RESOURCE(RESOURCE_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE JOB_SUBMISSION_INTERFACE
-(
- JOB_SUBMISSION_INTERFACE_ID VARCHAR (255) NOT NULL,
- COMPUTE_RESOURCE_ID VARCHAR (255) NOT NULL,
- JOB_SUBMISSION_PROTOCOL VARCHAR (255) NOT NULL,
- PRIORITY_ORDER INTEGER,
- CREATION_TIME TIMESTAMP DEFAULT NOW(),
- UPDATE_TIME TIMESTAMP DEFAULT '0000-00-00 00:00:00',
- PRIMARY KEY (COMPUTE_RESOURCE_ID,JOB_SUBMISSION_INTERFACE_ID),
- FOREIGN KEY (COMPUTE_RESOURCE_ID) REFERENCES COMPUTE_RESOURCE(RESOURCE_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE DATA_MOVEMENT_INTERFACE
-(
- COMPUTE_RESOURCE_ID VARCHAR (255) NOT NULL,
- DATA_MOVEMENT_PROTOCOL VARCHAR (255) NOT NULL,
- DATA_MOVEMENT_INTERFACE_ID VARCHAR (255) NOT NULL,
- PRIORITY_ORDER INTEGER,
- CREATION_TIME TIMESTAMP DEFAULT NOW(),
- UPDATE_TIME TIMESTAMP DEFAULT '0000-00-00 00:00:00',
- PRIMARY KEY (COMPUTE_RESOURCE_ID,DATA_MOVEMENT_INTERFACE_ID),
- FOREIGN KEY (COMPUTE_RESOURCE_ID) REFERENCES COMPUTE_RESOURCE(RESOURCE_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE STORAGE_RESOURCE
-(
- STORAGE_RESOURCE_ID VARCHAR (255) NOT NULL,
- HOST_NAME VARCHAR (255) NOT NULL,
- DESCRIPTION VARCHAR (255),
- ENABLED SMALLINT,
- CREATION_TIME TIMESTAMP DEFAULT NOW(),
- UPDATE_TIME TIMESTAMP DEFAULT '0000-00-00 00:00:00',
- PRIMARY KEY (STORAGE_RESOURCE_ID)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE STORAGE_INTERFACE
-(
- STORAGE_RESOURCE_ID VARCHAR (255) NOT NULL,
- DATA_MOVEMENT_INTERFACE_ID VARCHAR (255) NOT NULL,
- DATA_MOVEMENT_PROTOCOL VARCHAR (255) NOT NULL,
- PRIORITY_ORDER INTEGER,
- CREATION_TIME TIMESTAMP DEFAULT NOW(),
- UPDATE_TIME TIMESTAMP DEFAULT '0000-00-00 00:00:00',
- PRIMARY KEY (STORAGE_RESOURCE_ID,DATA_MOVEMENT_INTERFACE_ID),
- FOREIGN KEY (STORAGE_RESOURCE_ID) REFERENCES STORAGE_RESOURCE(STORAGE_RESOURCE_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE JOB_MANAGER_COMMAND
-(
- RESOURCE_JOB_MANAGER_ID VARCHAR (255) NOT NULL,
- COMMAND_TYPE VARCHAR (255) NOT NULL,
- COMMAND VARCHAR (255),
- PRIMARY KEY (RESOURCE_JOB_MANAGER_ID,COMMAND_TYPE),
- FOREIGN KEY (RESOURCE_JOB_MANAGER_ID) REFERENCES RESOURCE_JOB_MANAGER(RESOURCE_JOB_MANAGER_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE PARALLELISM_COMMAND
-(
- RESOURCE_JOB_MANAGER_ID VARCHAR (255) NOT NULL,
- COMMAND_TYPE VARCHAR (255) NOT NULL,
- COMMAND VARCHAR (255),
- PRIMARY KEY (RESOURCE_JOB_MANAGER_ID,COMMAND_TYPE),
- FOREIGN KEY (RESOURCE_JOB_MANAGER_ID) REFERENCES RESOURCE_JOB_MANAGER(RESOURCE_JOB_MANAGER_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE LOCAL_SUBMISSION
-(
- RESOURCE_JOB_MANAGER_ID VARCHAR (255) NOT NULL,
- JOB_SUBMISSION_INTERFACE_ID VARCHAR (255) NOT NULL,
- SECURITY_PROTOCOL VARCHAR (255) NOT NULL,
- CREATION_TIME TIMESTAMP DEFAULT NOW(),
- UPDATE_TIME TIMESTAMP DEFAULT '0000-00-00 00:00:00',
- PRIMARY KEY (JOB_SUBMISSION_INTERFACE_ID),
- FOREIGN KEY (RESOURCE_JOB_MANAGER_ID) REFERENCES RESOURCE_JOB_MANAGER(RESOURCE_JOB_MANAGER_ID)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE LOCAL_DATA_MOVEMENT
-(
- DATA_MOVEMENT_INTERFACE_ID VARCHAR (255) NOT NULL,
- PRIMARY KEY (DATA_MOVEMENT_INTERFACE_ID)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE STORAGE_PREFERENCE
-(
- GATEWAY_ID VARCHAR(255) NOT NULL,
- STORAGE_RESOURCE_ID VARCHAR(255) NOT NULL,
- LOGIN_USERNAME VARCHAR(255),
- FS_ROOT_LOCATION VARCHAR(255),
- RESOURCE_CS_TOKEN VARCHAR(255),
- PRIMARY KEY(GATEWAY_ID,STORAGE_RESOURCE_ID),
- FOREIGN KEY (GATEWAY_ID) REFERENCES GATEWAY_PROFILE(GATEWAY_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE USER_RESOURCE_PROFILE (
- USER_ID varchar(255) NOT NULL,
- CREATION_TIME datetime DEFAULT NULL,
- CS_TOKEN varchar(255) DEFAULT NULL,
- GATEWAY_ID varchar(255) DEFAULT NULL,
- IDENTITY_SERVER_PWD_CRED_TOKEN varchar(255) DEFAULT NULL,
- IDENTITY_SERVER_TENANT varchar(255) DEFAULT NULL,
- UPDATE_TIME datetime DEFAULT NULL,
- PRIMARY KEY (USER_ID,GATEWAY_ID)
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE USER_STORAGE_PREFERENCE (
- STORAGE_RESOURCE_ID varchar(255) NOT NULL,
- USER_ID varchar(255) NOT NULL,
- RESOURCE_CS_TOKEN varchar(255) DEFAULT NULL,
- FS_ROOT_LOCATION varchar(255) DEFAULT NULL,
- GATEWAY_ID varchar(255) DEFAULT NULL,
- LOGIN_USERNAME varchar(255) DEFAULT NULL,
- PRIMARY KEY (STORAGE_RESOURCE_ID,USER_ID,GATEWAY_ID)
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE USER_COMPUTE_RESOURCE_PREFERENCE (
- RESOURCE_ID varchar(255) NOT NULL,
- USER_ID varchar(255) NOT NULL,
- PREFERED_BATCH_QUEUE varchar(255) DEFAULT NULL,
- RESOURCE_CS_TOKEN varchar(255) DEFAULT NULL,
- GATEWAY_ID varchar(255) DEFAULT NULL,
- LOGIN_USERNAME varchar(255) DEFAULT NULL,
- ALLOCATION_PROJECT_NUMBER varchar(255) DEFAULT NULL,
- QUALITY_OF_SERVICE varchar(255) DEFAULT NULL,
- RESERVATION varchar(255) DEFAULT NULL,
- RESERVATION_END_TIME datetime DEFAULT NULL,
- RESERVATION_START_TIME datetime DEFAULT NULL,
- SCRATCH_LOCATION varchar(255) DEFAULT NULL,
- VALIDATED TINYINT(1) DEFAULT 0,
- PRIMARY KEY (RESOURCE_ID,USER_ID,GATEWAY_ID)
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE GROUP_RESOURCE_PROFILE (
- GATEWAY_ID varchar(255) NOT NULL,
- GROUP_RESOURCE_PROFILE_ID varchar(255) NOT NULL,
- GROUP_RESOURCE_PROFILE_NAME varchar(255) DEFAULT NULL,
- CREATION_TIME BIGINT NOT NULL,
- UPDATE_TIME BIGINT NOT NULL,
- DEFAULT_CREDENTIAL_STORE_TOKEN varchar(255) DEFAULT NULL,
- PRIMARY KEY (GROUP_RESOURCE_PROFILE_ID),
- UNIQUE (GATEWAY_ID, GROUP_RESOURCE_PROFILE_NAME)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE BATCH_QUEUE_RESOURCE_POLICY (
- RESOURCE_POLICY_ID varchar(255) NOT NULL,
- COMPUTE_RESOURCE_ID varchar(255) NOT NULL,
- GROUP_RESOURCE_PROFILE_ID varchar(255) NOT NULL,
- QUEUE_NAME varchar(255) NOT NULL,
- MAX_ALLOWED_NODES INTEGER,
- MAX_ALLOWED_CORES INTEGER,
- MAX_ALLOWED_WALLTIME INTEGER,
- PRIMARY KEY (RESOURCE_POLICY_ID),
- FOREIGN KEY (COMPUTE_RESOURCE_ID) REFERENCES COMPUTE_RESOURCE(RESOURCE_ID) ON DELETE CASCADE,
- FOREIGN KEY (GROUP_RESOURCE_PROFILE_ID) REFERENCES GROUP_RESOURCE_PROFILE(GROUP_RESOURCE_PROFILE_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE COMPUTE_RESOURCE_POLICY (
- RESOURCE_POLICY_ID varchar(255) NOT NULL,
- COMPUTE_RESOURCE_ID varchar(255) NOT NULL,
- GROUP_RESOURCE_PROFILE_ID varchar(255) NOT NULL,
- PRIMARY KEY (RESOURCE_POLICY_ID),
- FOREIGN KEY (COMPUTE_RESOURCE_ID) REFERENCES COMPUTE_RESOURCE(RESOURCE_ID) ON DELETE CASCADE,
- FOREIGN KEY (GROUP_RESOURCE_PROFILE_ID) REFERENCES GROUP_RESOURCE_PROFILE(GROUP_RESOURCE_PROFILE_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE COMPUTE_RESOURCE_POLICY_QUEUES (
- RESOURCE_POLICY_ID varchar(255) NOT NULL,
- QUEUE_NAME varchar(255) NOT NULL,
- PRIMARY KEY (RESOURCE_POLICY_ID, QUEUE_NAME),
- FOREIGN KEY (RESOURCE_POLICY_ID) REFERENCES COMPUTE_RESOURCE_POLICY(RESOURCE_POLICY_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE GROUP_COMPUTE_RESOURCE_PREFERENCE
-(
- RESOURCE_ID VARCHAR(255) NOT NULL,
- GROUP_RESOURCE_PROFILE_ID varchar(255) NOT NULL,
- RESOURCE_TYPE VARCHAR(255) NOT NULL,
- OVERRIDE_BY_AIRAVATA SMALLINT,
- PREFERED_JOB_SUB_PROTOCOL VARCHAR(255),
- PREFERED_DATA_MOVE_PROTOCOL VARCHAR(255),
- SCRATCH_LOCATION VARCHAR(255),
- LOGIN_USERNAME VARCHAR(255),
- RESOURCE_CS_TOKEN VARCHAR(255),
- PRIMARY KEY(RESOURCE_ID,GROUP_RESOURCE_PROFILE_ID),
- FOREIGN KEY (RESOURCE_ID) REFERENCES COMPUTE_RESOURCE(RESOURCE_ID) ON DELETE CASCADE,
- FOREIGN KEY (GROUP_RESOURCE_PROFILE_ID) REFERENCES GROUP_RESOURCE_PROFILE(GROUP_RESOURCE_PROFILE_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE SLURM_GROUP_COMPUTE_RESOURCE_PREFERENCE
-(
- RESOURCE_ID VARCHAR(255) NOT NULL,
- GROUP_RESOURCE_PROFILE_ID VARCHAR(255) NOT NULL,
- PREFERED_BATCH_QUEUE VARCHAR(255) DEFAULT NULL,
- ALLOCATION_PROJECT_NUMBER VARCHAR(255) DEFAULT NULL,
- USAGE_REPORTING_GATEWAY_ID VARCHAR(255) DEFAULT NULL,
- QUALITY_OF_SERVICE VARCHAR(255) DEFAULT NULL,
- RESERVATION VARCHAR(255) DEFAULT NULL,
- RESERVATION_START_TIME TIMESTAMP NOT NULL DEFAULT CURRENT_TIMESTAMP ON UPDATE CURRENT_TIMESTAMP,
- RESERVATION_END_TIME TIMESTAMP NOT NULL DEFAULT '0000-00-00 00:00:00',
- SSH_ACCOUNT_PROVISIONER VARCHAR(255) DEFAULT NULL,
- SSH_ACCOUNT_PROVISIONER_ADDITIONAL_INFO TEXT DEFAULT NULL,
- PRIMARY KEY (RESOURCE_ID, GROUP_RESOURCE_PROFILE_ID),
- CONSTRAINT FK_SLURM_PREF_TO_BASE FOREIGN KEY (RESOURCE_ID, GROUP_RESOURCE_PROFILE_ID)
- REFERENCES GROUP_COMPUTE_RESOURCE_PREFERENCE (RESOURCE_ID, GROUP_RESOURCE_PROFILE_ID)
- ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE AWS_GROUP_COMPUTE_RESOURCE_PREFERENCE
-(
- RESOURCE_ID VARCHAR(255) NOT NULL,
- GROUP_RESOURCE_PROFILE_ID VARCHAR(255) NOT NULL,
- AWS_REGION VARCHAR(255) NOT NULL,
- PREFERRED_AMI_ID VARCHAR(255) NOT NULL,
- PREFERRED_INSTANCE_TYPE VARCHAR(255) NOT NULL,
- PRIMARY KEY (RESOURCE_ID, GROUP_RESOURCE_PROFILE_ID),
- CONSTRAINT FK_AWS_PREF_TO_BASE FOREIGN KEY (RESOURCE_ID, GROUP_RESOURCE_PROFILE_ID)
- REFERENCES GROUP_COMPUTE_RESOURCE_PREFERENCE (RESOURCE_ID, GROUP_RESOURCE_PROFILE_ID)
- ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE COMPUTE_RESOURCE_RESERVATION -- ComputeResourceReservationEntity
- (RESERVATION_ID VARCHAR(255) NOT NULL, END_TIME TIMESTAMP NOT NULL, RESERVATION_NAME VARCHAR(255) NOT NULL, START_TIME TIMESTAMP NOT NULL, RESOURCE_ID VARCHAR(255) NOT NULL, GROUP_RESOURCE_PROFILE_ID VARCHAR(255) NOT NULL, PRIMARY KEY (RESERVATION_ID)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-CREATE TABLE COMPUTE_RESOURCE_RESERVATION_QUEUE (RESERVATION_ID VARCHAR(255), QUEUE_NAME VARCHAR(255) NOT NULL
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-CREATE INDEX I_CMPTN_Q_RESERVATION_ID ON COMPUTE_RESOURCE_RESERVATION_QUEUE (RESERVATION_ID);
-ALTER TABLE COMPUTE_RESOURCE_RESERVATION ADD CONSTRAINT FK_COMPUTE_RESOURCE_RESERVATION FOREIGN KEY (RESOURCE_ID, GROUP_RESOURCE_PROFILE_ID) REFERENCES GROUP_COMPUTE_RESOURCE_PREFERENCE (RESOURCE_ID, GROUP_RESOURCE_PROFILE_ID) ON DELETE CASCADE;
-
-CREATE TABLE GRP_SSH_ACC_PROV_CONFIG
-(
- RESOURCE_ID VARCHAR(255) NOT NULL,
- GROUP_RESOURCE_PROFILE_ID VARCHAR(255) NOT NULL,
- CONFIG_NAME VARCHAR(255) NOT NULL,
- CONFIG_VALUE VARCHAR(255),
- PRIMARY KEY (RESOURCE_ID, CONFIG_NAME, GROUP_RESOURCE_PROFILE_ID),
- FOREIGN KEY (RESOURCE_ID,GROUP_RESOURCE_PROFILE_ID) REFERENCES GROUP_COMPUTE_RESOURCE_PREFERENCE (RESOURCE_ID,GROUP_RESOURCE_PROFILE_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE PARSING_TEMPLATE
-(
- PARSING_TEMPLATE_ID VARCHAR(255) NOT NULL,
- APP_INTERFACE_ID VARCHAR(255) NOT NULL,
- GATEWAY_ID VARCHAR(255) NOT NULL,
- PRIMARY KEY (PARSING_TEMPLATE_ID)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE PARSER
-(
- PARSER_ID VARCHAR(255) NOT NULL,
- IMAGE_NAME VARCHAR(255) NOT NULL,
- OUTPUT_DIR_PATH VARCHAR(255) NOT NULL,
- INPUT_DIR_PATH VARCHAR(255) NOT NULL,
- EXECUTION_COMMAND VARCHAR(255) NOT NULL,
- GATEWAY_ID VARCHAR(255) NOT NULL,
- PRIMARY KEY (PARSER_ID)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE PARSER_OUTPUT
-(
- PARSER_OUTPUT_ID VARCHAR(255) NOT NULL,
- PARSER_OUTPUT_NAME VARCHAR(255) NOT NULL,
- PARSER_OUTPUT_REQUIRED TINYINT(1) NOT NULL,
- PARSER_ID VARCHAR(255) NOT NULL,
- OUTPUT_TYPE VARCHAR(255) NOT NULL,
- PRIMARY KEY (PARSER_OUTPUT_ID),
- FOREIGN KEY (PARSER_ID) REFERENCES PARSER (PARSER_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE PARSER_INPUT
-(
- PARSER_INPUT_ID VARCHAR(255) NOT NULL,
- PARSER_INPUT_NAME VARCHAR(255) NOT NULL,
- PARSER_INPUT_REQUIRED TINYINT(1) NOT NULL,
- PARSER_ID VARCHAR(255) NOT NULL,
- INPUT_TYPE VARCHAR(255) NOT NULL,
- PRIMARY KEY (PARSER_INPUT_ID),
- FOREIGN KEY (PARSER_ID) REFERENCES PARSER (PARSER_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE PARSING_TEMPLATE_INPUT
-(
- PARSING_TEMPLATE_INPUT_ID VARCHAR(255) NOT NULL,
- TARGET_PARSER_INPUT_ID VARCHAR(255) NOT NULL,
- APPLICATION_OUTPUT_NAME VARCHAR(255),
- VALUE VARCHAR(255),
- PARSING_TEMPLATE_ID VARCHAR(255) NOT NULL,
- PRIMARY KEY (PARSING_TEMPLATE_INPUT_ID),
- FOREIGN KEY (TARGET_PARSER_INPUT_ID) REFERENCES PARSER_INPUT (PARSER_INPUT_ID) ON DELETE CASCADE,
- FOREIGN KEY (PARSING_TEMPLATE_ID) REFERENCES PARSING_TEMPLATE (PARSING_TEMPLATE_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE PARSER_CONNECTOR
-(
- PARSER_CONNECTOR_ID VARCHAR(255) NOT NULL,
- PARENT_PARSER_ID VARCHAR(255) NOT NULL,
- CHILD_PARSER_ID VARCHAR(255) NOT NULL,
- PARSING_TEMPLATE_ID VARCHAR(255) NOT NULL,
- PRIMARY KEY (PARSER_CONNECTOR_ID),
- FOREIGN KEY (PARENT_PARSER_ID) REFERENCES PARSER (PARSER_ID) ON DELETE CASCADE,
- FOREIGN KEY (CHILD_PARSER_ID) REFERENCES PARSER (PARSER_ID) ON DELETE CASCADE,
- FOREIGN KEY (PARSING_TEMPLATE_ID) REFERENCES PARSING_TEMPLATE (PARSING_TEMPLATE_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE PARSER_CONNECTOR_INPUT
-(
- PARSER_CONNECTOR_INPUT_ID VARCHAR(255) NOT NULL,
- PARSER_INPUT_ID VARCHAR(255) NOT NULL,
- PARSER_OUTPUT_ID VARCHAR(255),
- VALUE VARCHAR(255),
- PARSER_CONNECTOR_ID VARCHAR(255) NOT NULL,
- PRIMARY KEY (PARSER_CONNECTOR_INPUT_ID),
- FOREIGN KEY (PARSER_INPUT_ID) REFERENCES PARSER_INPUT (PARSER_INPUT_ID) ON DELETE CASCADE,
- FOREIGN KEY (PARSER_OUTPUT_ID) REFERENCES PARSER_OUTPUT (PARSER_OUTPUT_ID) ON DELETE CASCADE,
- FOREIGN KEY (PARSER_CONNECTOR_ID) REFERENCES PARSER_CONNECTOR (PARSER_CONNECTOR_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE GATEWAY_GROUPS
-(
- GATEWAY_ID VARCHAR(255) NOT NULL,
- ADMINS_GROUP_ID VARCHAR(255),
- READ_ONLY_ADMINS_GROUP_ID VARCHAR(255),
- DEFAULT_GATEWAY_USERS_GROUP_ID VARCHAR(255),
- PRIMARY KEY(GATEWAY_ID)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE CLOUD_JOB_SUBMISSION (
- JOB_SUBMISSION_INTERFACE_ID varchar(255) NOT NULL,
- EXECUTABLE_TYPE VARCHAR(255) DEFAULT NULL,
- NODE_ID VARCHAR(255) DEFAULT NULL,
- PROVIDER_NAME VARCHAR(255) DEFAULT NULL,
- SECURITY_PROTOCOL VARCHAR(255) DEFAULT NULL,
- USER_ACCOUNT_NAME VARCHAR(255) DEFAULT NULL,
- PRIMARY KEY (JOB_SUBMISSION_INTERFACE_ID)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE CONFIGURATION
-(
- CONFIG_KEY VARCHAR(255),
- CONFIG_VAL VARCHAR(255),
- PRIMARY KEY(CONFIG_KEY, CONFIG_VAL)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-INSERT INTO CONFIGURATION (CONFIG_KEY, CONFIG_VAL) VALUES('app_catalog_version', '0.16');
-
diff --git a/airavata-api/src/main/resources/database_scripts/credstore-mysql.sql b/airavata-api/src/main/resources/database_scripts/credstore-mysql.sql
deleted file mode 100644
index faaa0a051a..0000000000
--- a/airavata-api/src/main/resources/database_scripts/credstore-mysql.sql
+++ /dev/null
@@ -1,27 +0,0 @@
-CREATE TABLE COMMUNITY_USER (
- GATEWAY_ID VARCHAR(100) NOT NULL,
- COMMUNITY_USER_NAME VARCHAR(100) NOT NULL,
- TOKEN_ID VARCHAR(100) NOT NULL,
- COMMUNITY_USER_EMAIL VARCHAR(256) NOT NULL,
- PRIMARY KEY (GATEWAY_ID, COMMUNITY_USER_NAME, TOKEN_ID)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE CREDENTIALS (
- GATEWAY_ID VARCHAR(100) NOT NULL,
- TOKEN_ID VARCHAR(100) NOT NULL,
- CREDENTIAL BLOB NOT NULL,
- PORTAL_USER_ID VARCHAR(256) NOT NULL,
- TIME_PERSISTED TIMESTAMP DEFAULT CURRENT_TIMESTAMP,
- DESCRIPTION VARCHAR(500),
- CREDENTIAL_OWNER_TYPE VARCHAR(10) DEFAULT 'GATEWAY' NOT NULL,
- PRIMARY KEY (GATEWAY_ID, TOKEN_ID)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE CONFIGURATION (
- CONFIG_KEY VARCHAR(255),
- CONFIG_VAL VARCHAR(255),
- PRIMARY KEY (CONFIG_KEY, CONFIG_VAL)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-INSERT INTO CONFIGURATION (CONFIG_KEY, CONFIG_VAL) VALUES ('credential_store_version', '0.16');
-
diff --git a/airavata-api/src/main/resources/database_scripts/expcatalog-mysql.sql b/airavata-api/src/main/resources/database_scripts/expcatalog-mysql.sql
deleted file mode 100644
index 4cf623c641..0000000000
--- a/airavata-api/src/main/resources/database_scripts/expcatalog-mysql.sql
+++ /dev/null
@@ -1,446 +0,0 @@
-/*
- *
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements. See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership. The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License. You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied. See the License for the
- * specific language governing permissions and limitations
- * under the License.
- *
- */
-
-CREATE TABLE GATEWAY
-(
- GATEWAY_ID VARCHAR(255),
- GATEWAY_NAME VARCHAR(255),
- DOMAIN VARCHAR(255),
- EMAIL_ADDRESS VARCHAR(255),
- GATEWAY_ACRONYM varchar(255),
- GATEWAY_ADMIN_EMAIL varchar(255),
- GATEWAY_ADMIN_FIRST_NAME varchar(255),
- GATEWAY_APPROVAL_STATUS varchar(255),
- GATEWAY_PUBLIC_ABSTRACT varchar(255),
- GATEWAY_URL varchar(255),
- GATEWAY_ADMIN_LAST_NAME varchar(255),
- IDENTITY_SERVER_PASSWORD_TOKEN varchar(255),
- IDENTITY_SERVER_USERNAME varchar(255),
- GATEWAY_REVIEW_PROPOSAL_DESCRIPTION varchar(255),
- DECLINED_REASON varchar(255),
- OAUTH_CLIENT_SECRET varchar(255),
- OAUTH_CLIENT_ID varchar(255),
- REQUEST_CREATION_TIME TIMESTAMP DEFAULT CURRENT_TIMESTAMP,
- REQUESTER_USERNAME VARCHAR(255),
- PRIMARY KEY (GATEWAY_ID)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE NOTIFICATION
-(
- NOTIFICATION_ID VARCHAR(255) NOT NULL,
- GATEWAY_ID VARCHAR(255),
- TITLE VARCHAR(255),
- PRIORITY VARCHAR(255),
- NOTIFICATION_MESSAGE VARCHAR(4096) NOT NULL,
- PUBLISHED_DATE TIMESTAMP,
- EXPIRATION_DATE TIMESTAMP,
- CREATION_DATE TIMESTAMP,
- PRIMARY KEY (NOTIFICATION_ID)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE USERS
-(
- AIRAVATA_INTERNAL_USER_ID VARCHAR(255) NOT NULL,
- USER_NAME VARCHAR(255),
- PASSWORD VARCHAR(255),
- GATEWAY_ID VARCHAR(255) NOT NULL,
- PRIMARY KEY (GATEWAY_ID, USER_NAME),
- FOREIGN KEY (GATEWAY_ID) REFERENCES GATEWAY(GATEWAY_ID) ON DELETE CASCADE,
- UNIQUE (AIRAVATA_INTERNAL_USER_ID)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE GATEWAY_WORKER
-(
- GATEWAY_ID VARCHAR(255) NOT NULL,
- USER_NAME VARCHAR(255),
- PRIMARY KEY (GATEWAY_ID, USER_NAME),
- FOREIGN KEY (GATEWAY_ID) REFERENCES GATEWAY(GATEWAY_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE PROJECT
-(
- GATEWAY_ID VARCHAR(255) NOT NULL,
- USER_NAME VARCHAR(255),
- PROJECT_NAME VARCHAR(255),
- PROJECT_ID VARCHAR(255),
- DESCRIPTION VARCHAR(255),
- CREATION_TIME TIMESTAMP DEFAULT NOW(),
- PRIMARY KEY (PROJECT_ID),
- FOREIGN KEY (GATEWAY_ID) REFERENCES GATEWAY(GATEWAY_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE PROJECT_USER
-(
- PROJECT_ID VARCHAR(255) NOT NULL,
- USER_NAME VARCHAR(255) NOT NULL,
- PRIMARY KEY (PROJECT_ID,USER_NAME),
- FOREIGN KEY (PROJECT_ID) REFERENCES PROJECT(PROJECT_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE EXPERIMENT (
- EXPERIMENT_ID varchar(255),
- PROJECT_ID varchar(255) NOT NULL,
- GATEWAY_ID varchar(255),
- EXPERIMENT_TYPE varchar(255),
- USER_NAME varchar(255),
- EXPERIMENT_NAME varchar(255),
- CREATION_TIME timestamp DEFAULT NOW(),
- DESCRIPTION varchar(255),
- EXECUTION_ID varchar(255),
- GATEWAY_EXECUTION_ID varchar(255),
- GATEWAY_INSTANCE_ID varchar(255),
- ENABLE_EMAIL_NOTIFICATION tinyint(1),
- EMAIL_ADDRESSES text,
- PRIMARY KEY (EXPERIMENT_ID),
- FOREIGN KEY (PROJECT_ID) REFERENCES PROJECT(PROJECT_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-
-CREATE TABLE EXPERIMENT_INPUT
-(
- EXPERIMENT_ID varchar(255) NOT NULL,
- INPUT_NAME varchar(255),
- INPUT_VALUE text,
- DATA_TYPE varchar(255),
- APPLICATION_ARGUMENT varchar(255),
- STANDARD_INPUT tinyint(1),
- USER_FRIENDLY_DESCRIPTION TEXT,
- METADATA varchar(4096),
- INPUT_ORDER int(11),
- IS_REQUIRED tinyint(1),
- REQUIRED_TO_ADDED_TO_CMD tinyint(1),
- DATA_STAGED tinyint(1),
- STORAGE_RESOURCE_ID varchar(255),
- IS_READ_ONLY tinyint(1),
- OVERRIDE_FILENAME VARCHAR(255),
- PRIMARY KEY(EXPERIMENT_ID,INPUT_NAME),
- FOREIGN KEY (EXPERIMENT_ID) REFERENCES EXPERIMENT(EXPERIMENT_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE EXPERIMENT_OUTPUT
-(
- EXPERIMENT_ID varchar(255) NOT NULL,
- OUTPUT_NAME varchar(255),
- OUTPUT_VALUE text,
- DATA_TYPE varchar(255),
- APPLICATION_ARGUMENT varchar(255),
- IS_REQUIRED tinyint(1),
- REQUIRED_TO_ADDED_TO_CMD tinyint(1),
- DATA_MOVEMENT tinyint(1),
- LOCATION varchar(255),
- SEARCH_QUERY varchar(255),
- OUTPUT_STREAMING SMALLINT,
- STORAGE_RESOURCE_ID varchar(255),
- METADATA varchar(4096),
- PRIMARY KEY(EXPERIMENT_ID,OUTPUT_NAME),
- FOREIGN KEY (EXPERIMENT_ID) REFERENCES EXPERIMENT(EXPERIMENT_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-
-CREATE TABLE EXPERIMENT_STATUS (
- STATUS_ID varchar(255),
- EXPERIMENT_ID varchar(255) NOT NULL,
- STATE varchar(255),
- TIME_OF_STATE_CHANGE TIMESTAMP(6) NOT NULL DEFAULT CURRENT_TIMESTAMP(6) ON UPDATE CURRENT_TIMESTAMP(6),
- REASON LONGTEXT,
- PRIMARY KEY (STATUS_ID, EXPERIMENT_ID),
- FOREIGN KEY (EXPERIMENT_ID) REFERENCES EXPERIMENT(EXPERIMENT_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-
-CREATE TABLE EXPERIMENT_ERROR (
- ERROR_ID varchar(255),
- EXPERIMENT_ID varchar(255) NOT NULL,
- CREATION_TIME timestamp DEFAULT NOW(),
- ACTUAL_ERROR_MESSAGE text,
- USER_FRIENDLY_MESSAGE text,
- TRANSIENT_OR_PERSISTENT tinyint(1),
- ROOT_CAUSE_ERROR_ID_LIST text,
- PRIMARY KEY (ERROR_ID, EXPERIMENT_ID),
- FOREIGN KEY (EXPERIMENT_ID) REFERENCES EXPERIMENT(EXPERIMENT_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE USER_CONFIGURATION_DATA (
- EXPERIMENT_ID varchar(255) NOT NULL,
- AIRAVATA_AUTO_SCHEDULE tinyint(1),
- OVERRIDE_MANUAL_SCHEDULED_PARAMS tinyint(1),
- SHARE_EXPERIMENT_PUBLICALLY tinyint(1),
- THROTTLE_RESOURCES tinyint(1),
- USER_DN varchar(255),
- GENERATE_CERT tinyint(1),
- RESOURCE_HOST_ID varchar(255),
- TOTAL_CPU_COUNT int(11),
- NODE_COUNT int(11),
- NUMBER_OF_THREADS int(11),
- QUEUE_NAME varchar(255),
- WALL_TIME_LIMIT int(11),
- TOTAL_PHYSICAL_MEMORY int(11),
- STATIC_WORKING_DIR varchar(255),
- OVERRIDE_LOGIN_USER_NAME varchar(255),
- OVERRIDE_SCRATCH_LOCATION varchar(255),
- OVERRIDE_ALLOCATION_PROJECT_NUMBER varchar(255),
- STORAGE_RESOURCE_ID varchar(255),
- EXPERIMENT_DATA_DIR VARCHAR (512),
- GROUP_RESOURCE_PROFILE_ID VARCHAR(255) DEFAULT NULL,
- IS_USE_USER_CR_PREF TINYINT(1),
- PRIMARY KEY (EXPERIMENT_ID),
- FOREIGN KEY (EXPERIMENT_ID) REFERENCES EXPERIMENT(EXPERIMENT_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE COMPUTE_RESOURCE_SCHEDULING (
- EXPERIMENT_ID varchar(255) NOT NULL,
- RESOURCE_HOST_ID varchar(255) NOT NULL,
- TOTAL_CPU_COUNT INT,
- NODE_COUNT INT,
- NUMBER_OF_THREADS INT,
- QUEUE_NAME varchar(255) NOT NULL,
- WALL_TIME_LIMIT INT,
- TOTAL_PHYSICAL_MEMORY INT,
- STATIC_WORKING_DIR varchar(255),
- OVERRIDE_LOGIN_USER_NAME varchar(255),
- OVERRIDE_SCRATCH_LOCATION varchar(255),
- OVERRIDE_ALLOCATION_PROJECT_NUMBER varchar(255),
- PARALLEL_GROUP_COUNT INT,
- PRIMARY KEY (EXPERIMENT_ID,RESOURCE_HOST_ID,QUEUE_NAME),
- FOREIGN KEY (EXPERIMENT_ID) REFERENCES EXPERIMENT(EXPERIMENT_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-
-CREATE VIEW LATEST_EXPERIMENT_STATUS AS
- select ES1.EXPERIMENT_ID AS EXPERIMENT_ID, ES1.STATE AS STATE, ES1.TIME_OF_STATE_CHANGE AS TIME_OF_STATE_CHANGE
- from EXPERIMENT_STATUS ES1 LEFT JOIN EXPERIMENT_STATUS ES2 ON (ES1.EXPERIMENT_ID = ES2.EXPERIMENT_ID
- AND ES1.TIME_OF_STATE_CHANGE < ES2.TIME_OF_STATE_CHANGE) WHERE ES2.TIME_OF_STATE_CHANGE is NULL;
-
-CREATE VIEW EXPERIMENT_SUMMARY AS
- select E.EXPERIMENT_ID AS EXPERIMENT_ID, E.PROJECT_ID AS PROJECT_ID, E.GATEWAY_ID AS GATEWAY_ID,
- E.USER_NAME AS USER_NAME, E.EXECUTION_ID AS EXECUTION_ID, E.EXPERIMENT_NAME AS EXPERIMENT_NAME,
- E.CREATION_TIME AS CREATION_TIME, E.DESCRIPTION AS DESCRIPTION, ES.STATE AS STATE, UD.RESOURCE_HOST_ID
- AS RESOURCE_HOST_ID, ES.TIME_OF_STATE_CHANGE AS TIME_OF_STATE_CHANGE
- from ((EXPERIMENT E left join LATEST_EXPERIMENT_STATUS ES on((E.EXPERIMENT_ID = ES.EXPERIMENT_ID)))
- left join USER_CONFIGURATION_DATA UD on((E.EXPERIMENT_ID = UD.EXPERIMENT_ID))) where 1;
-
-
-CREATE TABLE PROCESS (
- PROCESS_ID varchar(255),
- EXPERIMENT_ID varchar(255) NOT NULL,
- CREATION_TIME TIMESTAMP DEFAULT NOW(),
- LAST_UPDATE_TIME TIMESTAMP DEFAULT '0000-00-00 00:00:00',
- PROCESS_DETAIL text,
- APPLICATION_INTERFACE_ID varchar(255),
- TASK_DAG TEXT,
- APPLICATION_DEPLOYMENT_ID varchar(255),
- COMPUTE_RESOURCE_ID varchar(255),
- GATEWAY_EXECUTION_ID varchar(255),
- ENABLE_EMAIL_NOTIFICATION BOOLEAN,
- EMAIL_ADDRESSES TEXT,
- STORAGE_RESOURCE_ID varchar(255),
- USER_DN varchar(255),
- GENERATE_CERT SMALLINT,
- EXPERIMENT_DATA_DIR VARCHAR (512),
- USERNAME VARCHAR (255),
- GROUP_RESOURCE_PROFILE_ID VARCHAR (255) DEFAULT NULL,
- USE_USER_CR_PREF TINYINT(1),
- PRIMARY KEY (PROCESS_ID),
- FOREIGN KEY (EXPERIMENT_ID) REFERENCES EXPERIMENT(EXPERIMENT_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE PROCESS_INPUT
-(
- PROCESS_ID varchar(255) NOT NULL,
- INPUT_NAME varchar(255),
- INPUT_VALUE text,
- DATA_TYPE varchar(255),
- APPLICATION_ARGUMENT varchar(255),
- STANDARD_INPUT tinyint(1),
- USER_FRIENDLY_DESCRIPTION TEXT,
- METADATA varchar(4096),
- INPUT_ORDER int(11),
- IS_REQUIRED tinyint(1),
- REQUIRED_TO_ADDED_TO_CMD tinyint(1),
- DATA_STAGED tinyint(1),
- STORAGE_RESOURCE_ID varchar(255),
- IS_READ_ONLY tinyint(1),
- OVERRIDE_FILENAME VARCHAR(255),
- PRIMARY KEY(PROCESS_ID,INPUT_NAME),
- FOREIGN KEY (PROCESS_ID) REFERENCES PROCESS(PROCESS_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE PROCESS_OUTPUT
-(
- PROCESS_ID varchar(255) NOT NULL,
- OUTPUT_NAME varchar(255),
- OUTPUT_VALUE LONGTEXT,
- DATA_TYPE varchar(255),
- APPLICATION_ARGUMENT varchar(255),
- IS_REQUIRED tinyint(1),
- REQUIRED_TO_ADDED_TO_CMD tinyint(1),
- DATA_MOVEMENT tinyint(1),
- LOCATION varchar(255),
- SEARCH_QUERY varchar(255),
- OUTPUT_STREAMING SMALLINT,
- STORAGE_RESOURCE_ID varchar(255),
- METADATA varchar(4096),
- PRIMARY KEY(PROCESS_ID,OUTPUT_NAME),
- FOREIGN KEY (PROCESS_ID) REFERENCES PROCESS(PROCESS_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-
-CREATE TABLE PROCESS_STATUS (
- STATUS_ID varchar(255),
- PROCESS_ID varchar(255) NOT NULL,
- STATE varchar(255),
- TIME_OF_STATE_CHANGE TIMESTAMP(6) DEFAULT NOW(6) ON UPDATE NOW(6),
- REASON LONGTEXT,
- PRIMARY KEY (STATUS_ID, PROCESS_ID),
- FOREIGN KEY (PROCESS_ID) REFERENCES PROCESS(PROCESS_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-
-CREATE TABLE PROCESS_ERROR (
- ERROR_ID varchar(255),
- PROCESS_ID varchar(255) NOT NULL,
- CREATION_TIME timestamp DEFAULT NOW(),
- ACTUAL_ERROR_MESSAGE text,
- USER_FRIENDLY_MESSAGE text,
- TRANSIENT_OR_PERSISTENT tinyint(1),
- ROOT_CAUSE_ERROR_ID_LIST text,
- PRIMARY KEY (ERROR_ID, PROCESS_ID),
- FOREIGN KEY (PROCESS_ID) REFERENCES PROCESS(PROCESS_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE PROCESS_RESOURCE_SCHEDULE (
- PROCESS_ID varchar(255) NOT NULL,
- RESOURCE_HOST_ID varchar(255),
- TOTAL_CPU_COUNT int(11),
- NODE_COUNT int(11),
- NUMBER_OF_THREADS int(11),
- QUEUE_NAME varchar(255),
- WALL_TIME_LIMIT int(11),
- TOTAL_PHYSICAL_MEMORY int(11),
- STATIC_WORKING_DIR varchar(255),
- OVERRIDE_ALLOCATION_PROJECT_NUMBER varchar(255),
- OVERRIDE_LOGIN_USER_NAME varchar(255),
- OVERRIDE_SCRATCH_LOCATION varchar(255),
- PRIMARY KEY (PROCESS_ID),
- FOREIGN KEY (PROCESS_ID) REFERENCES PROCESS(PROCESS_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE TASK (
- TASK_ID varchar(255),
- TASK_TYPE varchar(255),
- PARENT_PROCESS_ID varchar(255) NOT NULL,
- CREATION_TIME timestamp DEFAULT NOW(),
- LAST_UPDATE_TIME TIMESTAMP DEFAULT '0000-00-00 00:00:00',
- TASK_DETAIL text,
- SUB_TASK_MODEL BLOB,
- MAX_RETRY int(11) NOT NULL DEFAULT '3',
- CURRENT_RETRY int(11) NOT NULL DEFAULT '0',
- PRIMARY KEY (TASK_ID),
- FOREIGN KEY (PARENT_PROCESS_ID) REFERENCES PROCESS(PROCESS_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE TASK_STATUS (
- STATUS_ID varchar(255),
- TASK_ID varchar(255) NOT NULL,
- STATE varchar(255),
- TIME_OF_STATE_CHANGE TIMESTAMP(6) DEFAULT NOW(6) ON UPDATE NOW(6),
- REASON LONGTEXT,
- PRIMARY KEY (STATUS_ID, TASK_ID),
- FOREIGN KEY (TASK_ID) REFERENCES TASK(TASK_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-
-CREATE TABLE TASK_ERROR (
- ERROR_ID varchar(255),
- TASK_ID varchar(255) NOT NULL,
- CREATION_TIME timestamp DEFAULT NOW(),
- ACTUAL_ERROR_MESSAGE text,
- USER_FRIENDLY_MESSAGE text,
- TRANSIENT_OR_PERSISTENT tinyint(1),
- ROOT_CAUSE_ERROR_ID_LIST text,
- PRIMARY KEY (ERROR_ID, TASK_ID),
- FOREIGN KEY (TASK_ID) REFERENCES TASK(TASK_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE JOB (
- JOB_ID varchar(255),
- TASK_ID varchar(255) NOT NULL,
- PROCESS_ID varchar(255),
- JOB_DESCRIPTION LONGTEXT NOT NULL,
- CREATION_TIME timestamp DEFAULT NOW(),
- COMPUTE_RESOURCE_CONSUMED varchar(255),
- JOB_NAME varchar(255),
- WORKING_DIR varchar(255),
- STD_OUT LONGTEXT,
- STD_ERR LONGTEXT,
- EXIT_CODE INT(11),
- PRIMARY KEY (JOB_ID, TASK_ID),
- FOREIGN KEY (TASK_ID) REFERENCES TASK(TASK_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE JOB_STATUS (
- STATUS_ID varchar(255),
- JOB_ID varchar(255) NOT NULL,
- TASK_ID varchar(255) NOT NULL,
- STATE varchar(255),
- TIME_OF_STATE_CHANGE TIMESTAMP(6) DEFAULT NOW(6) ON UPDATE NOW(6),
- REASON LONGTEXT,
- PRIMARY KEY (STATUS_ID, JOB_ID, TASK_ID),
- FOREIGN KEY (JOB_ID, TASK_ID) REFERENCES JOB(JOB_ID, TASK_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE QUEUE_STATUS(
- HOST_NAME VARCHAR(255) NOT NULL,
- QUEUE_NAME VARCHAR(255) NOT NULL,
- CREATED_TIME BIGINT(20) NOT NULL,
- QUEUE_UP TINYINT(1),
- RUNNING_JOBS INT(11),
- QUEUED_JOBS INT(11),
- PRIMARY KEY (HOST_NAME, QUEUE_NAME, CREATED_TIME)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE CONFIGURATION
-(
- CONFIG_KEY VARCHAR(255),
- CONFIG_VAL VARCHAR(255),
- EXPIRE_DATE TIMESTAMP DEFAULT NOW() ON UPDATE NOW(),
- CATEGORY_ID VARCHAR (255),
- PRIMARY KEY(CONFIG_KEY, CONFIG_VAL, CATEGORY_ID)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-INSERT INTO CONFIGURATION (CONFIG_KEY, CONFIG_VAL, EXPIRE_DATE, CATEGORY_ID) VALUES('registry.version', '0.16', NOW() ,'SYSTEM');
-
-CREATE TABLE PROCESS_WORKFLOW
-(
- PROCESS_ID varchar(255) NOT NULL,
- WORKFLOW_ID varchar(255) NOT NULL,
- TYPE varchar(255) DEFAULT NULL,
- CREATION_TIME timestamp DEFAULT NOW(),
- PRIMARY KEY (PROCESS_ID, WORKFLOW_ID),
- FOREIGN KEY (PROCESS_ID) REFERENCES PROCESS(PROCESS_ID) ON DELETE CASCADE
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE GATEWAY_USAGE_REPORTING_COMMAND (
- GATEWAY_ID VARCHAR(255) NOT NULL,
- COMPUTE_RESOURCE_ID VARCHAR(255) NOT NULL,
- COMMAND LONGTEXT NOT NULL,
- PRIMARY KEY (GATEWAY_ID, COMPUTE_RESOURCE_ID)
-)ENGINE=InnoDB DEFAULT CHARSET=latin1;
diff --git a/airavata-api/src/main/resources/database_scripts/replicacatalog-mysql.sql b/airavata-api/src/main/resources/database_scripts/replicacatalog-mysql.sql
deleted file mode 100644
index 99731e0a9c..0000000000
--- a/airavata-api/src/main/resources/database_scripts/replicacatalog-mysql.sql
+++ /dev/null
@@ -1,77 +0,0 @@
-/*
- *
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements. See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership. The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License. You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied. See the License for the
- * specific language governing permissions and limitations
- * under the License.
- *
- */
-CREATE TABLE DATA_PRODUCT (
- PRODUCT_URI VARCHAR (255),
- GATEWAY_ID VARCHAR (255),
- PRODUCT_NAME TEXT CHARACTER SET utf8mb4 COLLATE utf8mb4_bin,
- PRODUCT_DESCRIPTION VARCHAR (255) CHARACTER SET utf8mb4 COLLATE utf8mb4_bin,
- OWNER_NAME VARCHAR (255),
- PARENT_PRODUCT_URI VARCHAR (255),
- PRODUCT_SIZE INT,
- CREATION_TIME TIMESTAMP NULL DEFAULT '0000-00-00 00:00:00',
- LAST_MODIFIED_TIME TIMESTAMP NULL DEFAULT CURRENT_TIMESTAMP ON UPDATE CURRENT_TIMESTAMP,
- PRODUCT_TYPE VARCHAR(10),
- PRIMARY KEY (PRODUCT_URI),
- FOREIGN KEY (PARENT_PRODUCT_URI) REFERENCES DATA_PRODUCT (PRODUCT_URI) ON DELETE CASCADE
-) ENGINE = InnoDB DEFAULT CHARSET = latin1;
-
-CREATE TABLE DATA_REPLICA_LOCATION (
- REPLICA_ID VARCHAR (255),
- PRODUCT_URI VARCHAR (255) NOT NULL,
- REPLICA_NAME TEXT CHARACTER SET utf8mb4 COLLATE utf8mb4_bin,
- REPLICA_DESCRIPTION VARCHAR (255) CHARACTER SET utf8mb4 COLLATE utf8mb4_bin,
- STORAGE_RESOURCE_ID VARCHAR (255),
- FILE_PATH VARCHAR (1024) CHARACTER SET utf8mb4 COLLATE utf8mb4_bin,
- CREATION_TIME TIMESTAMP NULL DEFAULT '0000-00-00 00:00:00',
- LAST_MODIFIED_TIME TIMESTAMP NULL DEFAULT CURRENT_TIMESTAMP ON UPDATE CURRENT_TIMESTAMP,
- VALID_UNTIL_TIME TIMESTAMP NULL DEFAULT '0000-00-00 00:00:00',
- REPLICA_LOCATION_CATEGORY VARCHAR(26),
- REPLICA_PERSISTENT_TYPE VARCHAR(10),
- PRIMARY KEY (REPLICA_ID),
- FOREIGN KEY (PRODUCT_URI) REFERENCES DATA_PRODUCT(PRODUCT_URI) ON DELETE CASCADE
-) ENGINE = InnoDB DEFAULT CHARSET = latin1;
-
-CREATE TABLE DATA_PRODUCT_METADATA (
- PRODUCT_URI VARCHAR(255) NOT NULL,
- METADATA_KEY VARCHAR(255),
- METADATA_VALUE VARCHAR(255),
- PRIMARY KEY(PRODUCT_URI, METADATA_KEY),
- FOREIGN KEY (PRODUCT_URI) REFERENCES DATA_PRODUCT(PRODUCT_URI) ON DELETE CASCADE
-) ENGINE = InnoDB DEFAULT CHARSET = latin1;
-
-CREATE TABLE DATA_REPLICA_METADATA (
- REPLICA_ID VARCHAR(255) NOT NULL,
- METADATA_KEY VARCHAR(255),
- METADATA_VALUE VARCHAR(255),
- PRIMARY KEY(REPLICA_ID, METADATA_KEY),
- FOREIGN KEY (REPLICA_ID) REFERENCES DATA_REPLICA_LOCATION(REPLICA_ID) ON DELETE CASCADE
-) ENGINE = InnoDB DEFAULT CHARSET = latin1;
-
-CREATE TABLE CONFIGURATION (
- CONFIG_KEY VARCHAR(255),
- CONFIG_VAL VARCHAR(255),
- PRIMARY KEY(CONFIG_KEY, CONFIG_VAL)
-) ENGINE = InnoDB DEFAULT CHARSET = latin1;
-
-INSERT INTO
- CONFIGURATION (CONFIG_KEY, CONFIG_VAL)
-VALUES
- ('data_catalog_version', '0.16');
diff --git a/airavata-api/src/main/resources/database_scripts/sharing-registry-mysql.sql b/airavata-api/src/main/resources/database_scripts/sharing-registry-mysql.sql
deleted file mode 100644
index 87b55d974a..0000000000
--- a/airavata-api/src/main/resources/database_scripts/sharing-registry-mysql.sql
+++ /dev/null
@@ -1,149 +0,0 @@
-/*
- *
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements. See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership. The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License. You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied. See the License for the
- * specific language governing permissions and limitations
- * under the License.
- *
-*/
-
-CREATE TABLE DOMAIN (
- DOMAIN_ID VARCHAR(255) NOT NULL,
- NAME VARCHAR(255) NOT NULL,
- DESCRIPTION VARCHAR(255),
- CREATED_TIME BIGINT NOT NULL,
- UPDATED_TIME BIGINT NOT NULL,
- INITIAL_USER_GROUP_ID VARCHAR(255),
- PRIMARY KEY (DOMAIN_ID)
-)ENGINE=InnoDB DEFAULT CHARACTER SET=latin1;
-
-CREATE TABLE SHARING_USER (
- USER_ID VARCHAR(255) NOT NULL,
- DOMAIN_ID VARCHAR(255) NOT NULL,
- USER_NAME VARCHAR(255) NOT NULL,
- FIRST_NAME VARCHAR (255),
- LAST_NAME VARCHAR (255),
- EMAIL VARCHAR (255),
- ICON BLOB,
- CREATED_TIME BIGINT NOT NULL,
- UPDATED_TIME BIGINT NOT NULL,
- PRIMARY KEY (USER_ID, DOMAIN_ID),
- FOREIGN KEY (DOMAIN_ID) REFERENCES DOMAIN(DOMAIN_ID) ON DELETE CASCADE ON UPDATE NO ACTION
-)ENGINE=InnoDB DEFAULT CHARACTER SET=latin1;
-
-CREATE TABLE USER_GROUP (
- GROUP_ID VARCHAR(255) NOT NULL,
- DOMAIN_ID VARCHAR(255) NOT NULL,
- NAME VARCHAR(255) NOT NULL,
- DESCRIPTION VARCHAR(255),
- OWNER_ID VARCHAR(255) NOT NULL,
- GROUP_TYPE VARCHAR(255) NOT NULL,
- GROUP_CARDINALITY VARCHAR(255) NOT NULL,
- CREATED_TIME BIGINT NOT NULL,
- UPDATED_TIME BIGINT NOT NULL,
- PRIMARY KEY (GROUP_ID, DOMAIN_ID),
- FOREIGN KEY (OWNER_ID, DOMAIN_ID) REFERENCES SHARING_USER(USER_ID, DOMAIN_ID) ON DELETE CASCADE ON UPDATE NO ACTION
-)ENGINE=InnoDB DEFAULT CHARACTER SET=latin1;
-
-CREATE TABLE GROUP_ADMIN (
- ADMIN_ID VARCHAR(255) NOT NULL,
- GROUP_ID VARCHAR(255) NOT NULL,
- DOMAIN_ID VARCHAR(255) NOT NULL,
- PRIMARY KEY (ADMIN_ID, GROUP_ID, DOMAIN_ID),
- FOREIGN KEY (ADMIN_ID, DOMAIN_ID) REFERENCES SHARING_USER(USER_ID, DOMAIN_ID) ON DELETE CASCADE ON UPDATE NO ACTION
-)ENGINE=InnoDB DEFAULT CHARACTER SET=latin1;
-
-CREATE TABLE GROUP_MEMBERSHIP (
- PARENT_ID VARCHAR(255) NOT NULL,
- CHILD_ID VARCHAR(255) NOT NULL,
- DOMAIN_ID VARCHAR(255) NOT NULL,
- CHILD_TYPE VARCHAR(255) NOT NULL,
- CREATED_TIME BIGINT NOT NULL,
- UPDATED_TIME BIGINT NOT NULL,
- PRIMARY KEY (PARENT_ID, CHILD_ID, DOMAIN_ID),
- FOREIGN KEY (PARENT_ID, DOMAIN_ID) REFERENCES USER_GROUP(GROUP_ID, DOMAIN_ID) ON DELETE CASCADE ON UPDATE NO ACTION,
- FOREIGN KEY (CHILD_ID, DOMAIN_ID) REFERENCES USER_GROUP(GROUP_ID, DOMAIN_ID) ON DELETE CASCADE ON UPDATE NO ACTION
-)ENGINE=InnoDB DEFAULT CHARACTER SET=latin1;
-
-CREATE TABLE ENTITY_TYPE (
- ENTITY_TYPE_ID VARCHAR(255) NOT NULL,
- DOMAIN_ID VARCHAR(255) NOT NULL,
- NAME VARCHAR(255) NOT NULL,
- DESCRIPTION VARCHAR(255),
- CREATED_TIME BIGINT NOT NULL,
- UPDATED_TIME BIGINT NOT NULL,
- PRIMARY KEY (ENTITY_TYPE_ID, DOMAIN_ID),
- FOREIGN KEY (DOMAIN_ID) REFERENCES DOMAIN(DOMAIN_ID) ON DELETE CASCADE ON UPDATE NO ACTION
-)ENGINE=InnoDB DEFAULT CHARACTER SET=latin1;
-
-CREATE TABLE PERMISSION_TYPE (
- PERMISSION_TYPE_ID VARCHAR(255) NOT NULL,
- DOMAIN_ID VARCHAR(255) NOT NULL,
- NAME VARCHAR(255) NOT NULL,
- DESCRIPTION VARCHAR(255),
- CREATED_TIME BIGINT NOT NULL,
- UPDATED_TIME BIGINT NOT NULL,
- PRIMARY KEY (PERMISSION_TYPE_ID, DOMAIN_ID),
- FOREIGN KEY (DOMAIN_ID) REFERENCES DOMAIN(DOMAIN_ID) ON DELETE CASCADE ON UPDATE NO ACTION
-)ENGINE=InnoDB DEFAULT CHARACTER SET=latin1;
-
-CREATE TABLE ENTITY (
- ENTITY_ID VARCHAR(255) NOT NULL,
- DOMAIN_ID VARCHAR(255) NOT NULL,
- ENTITY_TYPE_ID VARCHAR(255) NOT NULL,
- OWNER_ID VARCHAR(255) NOT NULL,
- PARENT_ENTITY_ID VARCHAR(255),
- NAME VARCHAR(255) NOT NULL,
- DESCRIPTION VARCHAR(255),
- BINARY_DATA BLOB,
- FULL_TEXT TEXT,
- SHARED_COUNT BIGINT DEFAULT 0,
- ORIGINAL_ENTITY_CREATION_TIME BIGINT NOT NULL,
- CREATED_TIME BIGINT NOT NULL,
- UPDATED_TIME BIGINT NOT NULL,
- PRIMARY KEY (ENTITY_ID, DOMAIN_ID),
- FOREIGN KEY (ENTITY_TYPE_ID, DOMAIN_ID) REFERENCES ENTITY_TYPE(ENTITY_TYPE_ID, DOMAIN_ID) ON DELETE CASCADE ON UPDATE NO ACTION,
- FOREIGN KEY (OWNER_ID, DOMAIN_ID) REFERENCES SHARING_USER(USER_ID, DOMAIN_ID) ON DELETE CASCADE ON UPDATE NO ACTION,
- FOREIGN KEY (PARENT_ENTITY_ID, DOMAIN_ID) REFERENCES ENTITY(ENTITY_ID, DOMAIN_ID) ON DELETE CASCADE ON UPDATE NO ACTION
-)ENGINE=InnoDB DEFAULT CHARACTER SET=latin1;
-
-ALTER TABLE ENTITY ADD FULLTEXT FULL_TEXT_INDEX(FULL_TEXT);
-
-CREATE TABLE SHARING (
- PERMISSION_TYPE_ID VARCHAR(255) NOT NULL,
- ENTITY_ID VARCHAR(255) NOT NULL,
- DOMAIN_ID VARCHAR (255) NOT NULL,
- GROUP_ID VARCHAR(255) NOT NULL,
- SHARING_TYPE VARCHAR(255) NOT NULL,
- INHERITED_PARENT_ID VARCHAR(255),
- CREATED_TIME BIGINT NOT NULL,
- UPDATED_TIME BIGINT NOT NULL,
- PRIMARY KEY (PERMISSION_TYPE_ID, ENTITY_ID, GROUP_ID, DOMAIN_ID, INHERITED_PARENT_ID),
- CONSTRAINT `SHARING_PERMISSION_TYPE_ID_DOMAIN_ID_FK` FOREIGN KEY (PERMISSION_TYPE_ID, DOMAIN_ID) REFERENCES PERMISSION_TYPE(PERMISSION_TYPE_ID, DOMAIN_ID) ON DELETE CASCADE ON UPDATE NO ACTION,
- CONSTRAINT `SHARING_ENTITY_ID_DOMAIN_ID_FK` FOREIGN KEY (ENTITY_ID, DOMAIN_ID) REFERENCES ENTITY(ENTITY_ID, DOMAIN_ID) ON DELETE CASCADE ON UPDATE NO ACTION,
- CONSTRAINT `SHARING_INHERITED_PARENT_ID_DOMAIN_ID_FK` FOREIGN KEY (INHERITED_PARENT_ID, DOMAIN_ID) REFERENCES ENTITY(ENTITY_ID, DOMAIN_ID) ON DELETE CASCADE ON UPDATE NO ACTION,
- CONSTRAINT `SHARING_GROUP_ID_DOMAIN_ID_FK` FOREIGN KEY (GROUP_ID, DOMAIN_ID) REFERENCES USER_GROUP(GROUP_ID, DOMAIN_ID) ON DELETE CASCADE ON UPDATE NO ACTION
-)ENGINE=InnoDB DEFAULT CHARACTER SET=latin1;
-
-CREATE TABLE CONFIGURATION
-(
- CONFIG_KEY VARCHAR(255) NOT NULL,
- CONFIG_VALUE VARCHAR(255) NOT NULL,
- PRIMARY KEY(CONFIG_KEY, CONFIG_VALUE)
-)ENGINE=InnoDB DEFAULT CHARACTER SET=latin1;
-
-INSERT INTO CONFIGURATION (CONFIG_KEY, CONFIG_VALUE) VALUES('sharing_reg_version', '0.17');
-
-ALTER TABLE DOMAIN ADD CONSTRAINT `DOMAIN_INITIAL_USER_GROUP_ID_FK` FOREIGN KEY (INITIAL_USER_GROUP_ID, DOMAIN_ID) REFERENCES USER_GROUP(GROUP_ID, DOMAIN_ID) ON DELETE CASCADE ON UPDATE NO ACTION;
diff --git a/airavata-api/src/main/resources/database_scripts/user-profile-catalog-mysql.sql b/airavata-api/src/main/resources/database_scripts/user-profile-catalog-mysql.sql
deleted file mode 100644
index bcc37afdb9..0000000000
--- a/airavata-api/src/main/resources/database_scripts/user-profile-catalog-mysql.sql
+++ /dev/null
@@ -1,163 +0,0 @@
-/*
- *
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements. See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership. The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License. You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied. See the License for the
- * specific language governing permissions and limitations
- * under the License.
- *
- */
-
-CREATE TABLE IF NOT EXISTS GATEWAY (
- AIRAVATA_INTERNAL_GATEWAY_ID varchar(255) NOT NULL,
- DECLINED_REASON varchar(255) DEFAULT NULL,
- GATEWAY_DOMAIN varchar(255) DEFAULT NULL,
- EMAIL_ADDRESS varchar(255) DEFAULT NULL,
- GATEWAY_ACRONYM varchar(255) DEFAULT NULL,
- GATEWAY_ADMIN_EMAIL varchar(255) DEFAULT NULL,
- GATEWAY_ADMIN_FIRST_NAME varchar(255) DEFAULT NULL,
- GATEWAY_ADMIN_LAST_NAME varchar(255) DEFAULT NULL,
- GATEWAY_APPROVAL_STATUS varchar(255) DEFAULT NULL,
- GATEWAY_ID varchar(255) DEFAULT NULL,
- GATEWAY_NAME varchar(255) DEFAULT NULL,
- GATEWAY_PUBLIC_ABSTRACT varchar(255) DEFAULT NULL,
- GATEWAY_URL varchar(255) DEFAULT NULL,
- IDENTITY_SERVER_PASSWORD_TOKEN varchar(255) DEFAULT NULL,
- IDENTITY_SERVER_USERNAME varchar(255) DEFAULT NULL,
- OAUTH_CLIENT_ID varchar(255) DEFAULT NULL,
- OAUTH_CLIENT_SECRET varchar(255) DEFAULT NULL,
- REQUEST_CREATION_TIME bigint(20) DEFAULT NULL,
- REQUESTER_USERNAME varchar(255) DEFAULT NULL,
- GATEWAY_REVIEW_PROPOSAL_DESCRIPTION varchar(255) DEFAULT NULL,
- PRIMARY KEY (AIRAVATA_INTERNAL_GATEWAY_ID)
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE IF NOT EXISTS USER_PROFILE (
- AIRAVATA_INTERNAL_USER_ID VARCHAR (255) NOT NULL,
- USER_ID VARCHAR (255) NOT NULL,
- GATEWAY_ID VARCHAR (255) NOT NULL,
- USER_MODEL_VERSION VARCHAR (255),
- FIRST_NAME VARCHAR (255),
- LAST_NAME VARCHAR (255),
- MIDDLE_NAME VARCHAR (255),
- NAME_PREFIX VARCHAR (255),
- NAME_SUFFIX VARCHAR (255),
- ORCID_ID VARCHAR (255),
- COUNTRY VARCHAR (255),
- HOME_ORGANIZATION VARCHAR (255),
- ORIGINATION_AFFILIATION VARCHAR (255),
- CREATION_TIME TIMESTAMP DEFAULT CURRENT_TIMESTAMP,
- LAST_ACCESS_TIME TIMESTAMP,
- VALID_UNTIL DATETIME,
- STATE VARCHAR (255),
- COMMENTS TEXT,
- GPG_KEY TEXT,
- TIME_ZONE VARCHAR (255),
- PRIMARY KEY (AIRAVATA_INTERNAL_USER_ID)
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE IF NOT EXISTS USER_PROFILE_EMAIL (
- AIRAVATA_INTERNAL_USER_ID VARCHAR (255) NOT NULL,
- EMAIL VARCHAR (255) NOT NULL,
- PRIMARY KEY (AIRAVATA_INTERNAL_USER_ID, EMAIL),
- FOREIGN KEY (AIRAVATA_INTERNAL_USER_ID) REFERENCES USER_PROFILE(AIRAVATA_INTERNAL_USER_ID) ON DELETE CASCADE
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE IF NOT EXISTS USER_PROFILE_PHONE (
- AIRAVATA_INTERNAL_USER_ID VARCHAR (255) NOT NULL,
- PHONE VARCHAR (255) NOT NULL,
- PRIMARY KEY (AIRAVATA_INTERNAL_USER_ID, PHONE ),
- FOREIGN KEY (AIRAVATA_INTERNAL_USER_ID) REFERENCES USER_PROFILE(AIRAVATA_INTERNAL_USER_ID) ON DELETE CASCADE
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE IF NOT EXISTS USER_PROFILE_NATIONALITY (
- AIRAVATA_INTERNAL_USER_ID VARCHAR (255) NOT NULL,
- NATIONALITY VARCHAR (255) NOT NULL,
- PRIMARY KEY (AIRAVATA_INTERNAL_USER_ID, NATIONALITY ),
- FOREIGN KEY (AIRAVATA_INTERNAL_USER_ID) REFERENCES USER_PROFILE(AIRAVATA_INTERNAL_USER_ID) ON DELETE CASCADE
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE IF NOT EXISTS USER_PROFILE_LABELED_URI (
- AIRAVATA_INTERNAL_USER_ID VARCHAR (255) NOT NULL,
- LABELED_URI VARCHAR (255) NOT NULL,
- PRIMARY KEY (AIRAVATA_INTERNAL_USER_ID, LABELED_URI ),
- FOREIGN KEY (AIRAVATA_INTERNAL_USER_ID) REFERENCES USER_PROFILE(AIRAVATA_INTERNAL_USER_ID) ON DELETE CASCADE
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE IF NOT EXISTS NSF_DEMOGRAPHIC (
- AIRAVATA_INTERNAL_USER_ID VARCHAR (255) NOT NULL,
- GENDER VARCHAR (255) NOT NULL,
- PRIMARY KEY (AIRAVATA_INTERNAL_USER_ID),
- FOREIGN KEY (AIRAVATA_INTERNAL_USER_ID) REFERENCES USER_PROFILE(AIRAVATA_INTERNAL_USER_ID) ON DELETE CASCADE
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE IF NOT EXISTS NSF_DEMOGRAPHIC_ETHNICITY (
- AIRAVATA_INTERNAL_USER_ID VARCHAR (255) NOT NULL,
- ETHNICITY VARCHAR (255) NOT NULL,
- PRIMARY KEY (AIRAVATA_INTERNAL_USER_ID, ETHNICITY ),
- FOREIGN KEY (AIRAVATA_INTERNAL_USER_ID) REFERENCES NSF_DEMOGRAPHIC(AIRAVATA_INTERNAL_USER_ID) ON DELETE CASCADE
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE IF NOT EXISTS NSF_DEMOGRAPHIC_RACE (
- AIRAVATA_INTERNAL_USER_ID VARCHAR (255) NOT NULL,
- RACE VARCHAR (255) NOT NULL,
- PRIMARY KEY (AIRAVATA_INTERNAL_USER_ID, RACE ),
- FOREIGN KEY (AIRAVATA_INTERNAL_USER_ID) REFERENCES NSF_DEMOGRAPHIC(AIRAVATA_INTERNAL_USER_ID) ON DELETE CASCADE
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE IF NOT EXISTS NSF_DEMOGRAPHIC_DISABILITY (
- AIRAVATA_INTERNAL_USER_ID VARCHAR (255) NOT NULL,
- DISABILITY VARCHAR (255) NOT NULL,
- PRIMARY KEY (AIRAVATA_INTERNAL_USER_ID, DISABILITY ),
- FOREIGN KEY (AIRAVATA_INTERNAL_USER_ID) REFERENCES NSF_DEMOGRAPHIC(AIRAVATA_INTERNAL_USER_ID) ON DELETE CASCADE
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE IF NOT EXISTS CUSTOMIZED_DASHBOARD (
- AIRAVATA_INTERNAL_USER_ID VARCHAR (255) NOT NULL,
- ENABLED_EXPERIMENT_ID VARCHAR (255),
- ENABLED_NAME VARCHAR (255),
- ENABLED_DESCRIPTION VARCHAR (255),
- ENABLED_PROJECT VARCHAR (255),
- ENABLED_OWNER VARCHAR (255),
- ENABLED_APPLICATION VARCHAR (255),
- ENABLED_COMPUTE_RESOURCE VARCHAR (255),
- ENABLED_JOB_NAME VARCHAR (255),
- ENABLED_JOB_ID VARCHAR (255),
- ENABLED_JOB_STATUS VARCHAR (255),
- ENABLED_JOB_CREATION_TIME VARCHAR (255),
- ENABLED_NOTIFICATIONS_TO VARCHAR (255),
- ENABLED_WORKING_DIR VARCHAR (255),
- ENABLED_JOB_DESCRIPTION VARCHAR (255),
- ENABLED_CREATION_TIME VARCHAR (255),
- ENABLED_LAST_MODIFIED_TIME VARCHAR (255),
- ENABLED_WALL_TIME VARCHAR (255),
- ENABLED_CPU_COUNT VARCHAR (255),
- ENABLED_NODE_COUNT VARCHAR (255),
- ENABLED_QUEUE VARCHAR (255),
- ENABLED_INPUTS VARCHAR (255),
- ENABLED_OUTPUTS VARCHAR (255),
- ENABLED_STORAGE_DIR VARCHAR (255),
- ENABLED_ERRORS VARCHAR (255),
- PRIMARY KEY (AIRAVATA_INTERNAL_USER_ID),
- FOREIGN KEY (AIRAVATA_INTERNAL_USER_ID) REFERENCES USER_PROFILE(AIRAVATA_INTERNAL_USER_ID) ON DELETE CASCADE
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-CREATE TABLE CONFIGURATION
-(
- CONFIG_KEY VARCHAR(255) NOT NULL,
- CONFIG_VAL VARCHAR(255) NOT NULL,
- PRIMARY KEY(CONFIG_KEY, CONFIG_VAL)
-) ENGINE=InnoDB DEFAULT CHARSET=latin1;
-
-INSERT INTO CONFIGURATION (CONFIG_KEY, CONFIG_VAL) VALUES('user_profile_catalog_version', '0.17');
diff --git a/airavata-api/src/main/resources/database_scripts/workflowcatalog-mysql.sql b/airavata-api/src/main/resources/database_scripts/workflowcatalog-mysql.sql
deleted file mode 100644
index a4d43bbf25..0000000000
--- a/airavata-api/src/main/resources/database_scripts/workflowcatalog-mysql.sql
+++ /dev/null
@@ -1,128 +0,0 @@
-/*
- *
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements. See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership. The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License. You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied. See the License for the
- * specific language governing permissions and limitations
- * under the License.
- *
- */
-
-CREATE TABLE WORKFLOW
-(
- TEMPLATE_ID VARCHAR (255) NOT NULL,
- WORKFLOW_NAME VARCHAR (255) NOT NULL,
- CREATED_USER VARCHAR (255),
- GATEWAY_ID VARCHAR (255),
- GRAPH LONGTEXT,
- IMAGE BLOB,
- CREATION_TIME timestamp DEFAULT NOW(),
- UPDATE_TIME TIMESTAMP DEFAULT NOW() ON UPDATE NOW(),
- PRIMARY KEY (TEMPLATE_ID)
-);
-
-CREATE TABLE WORKFLOW_INPUT
-(
- TEMPLATE_ID VARCHAR(255) NOT NULL,
- INPUT_KEY VARCHAR(255),
- INPUT_VALUE VARCHAR(255),
- DATA_TYPE VARCHAR(255),
- METADATA VARCHAR(255),
- APP_ARGUMENT VARCHAR(255),
- STANDARD_INPUT SMALLINT,
- USER_FRIENDLY_DESC VARCHAR(255),
- INPUT_ORDER INTEGER,
- IS_REQUIRED SMALLINT,
- REQUIRED_TO_COMMANDLINE SMALLINT,
- DATA_STAGED SMALLINT,
- PRIMARY KEY(TEMPLATE_ID,INPUT_KEY),
... 5312 lines suppressed ...