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Posted to commits@taverna.apache.org by Apache Jenkins Server <je...@builds.apache.org> on 2016/02/27 23:39:05 UTC

Build failed in Jenkins: incubator-taverna-plugin-bioinformatics #214

See <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/214/>

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[INFO] 
[INFO] --- maven-clean-plugin:2.5:clean (default-clean) @ biomart-activity-ui ---
[INFO] Deleting <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/target>
[INFO] 
[INFO] --- maven-resources-plugin:2.7:resources (default-resources) @ biomart-activity-ui ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 7 resources
[INFO] 
[INFO] --- maven-compiler-plugin:3.1:compile (default-compile) @ biomart-activity-ui ---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 9 source files to <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/target/classes>
[INFO] -------------------------------------------------------------
[ERROR] COMPILATION ERROR : 
[INFO] -------------------------------------------------------------
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceDescription.java>:[34,52] package org.apache.taverna.scufl2.api.configurations does not exist
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceDescription.java>:[112,16] cannot find symbol
  symbol:   class Configuration
  location: class net.sf.taverna.t2.activities.biomart.servicedescriptions.BiomartServiceDescription
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityContextualView.java>:[47,46] package org.apache.taverna.scufl2.api.activity does not exist
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityContextualView.java>:[59,46] cannot find symbol
  symbol:   class Activity
  location: class net.sf.taverna.t2.activities.biomart.views.BiomartActivityContextualView
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/actions/BiomartConfigurationPanel.java>:[51,46] package org.apache.taverna.scufl2.api.activity does not exist
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/actions/BiomartConfigurationPanel.java>:[70,42] cannot find symbol
  symbol:   class Activity
  location: class net.sf.taverna.t2.activities.biomart.actions.BiomartConfigurationPanel
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityViewFactory.java>:[36,46] package org.apache.taverna.scufl2.api.activity does not exist
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityViewFactory.java>:[38,74] cannot find symbol
  symbol: class Activity
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityViewFactory.java>:[52,46] cannot find symbol
  symbol:   class Activity
  location: class net.sf.taverna.t2.activities.biomart.views.BiomartActivityViewFactory
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/actions/BiomartActivityConfigurationAction.java>:[36,46] package org.apache.taverna.scufl2.api.activity does not exist
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/actions/BiomartActivityConfigurationAction.java>:[47,51] cannot find symbol
  symbol:   class Activity
  location: class net.sf.taverna.t2.activities.biomart.actions.BiomartActivityConfigurationAction
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceProvider.java>:[29,80] type net.sf.taverna.t2.servicedescriptions.AbstractConfigurableServiceProvider does not take parameters
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceProvider.java>:[44,25] cannot find symbol
  symbol:   class FindServiceDescriptionsCallBack
  location: class net.sf.taverna.t2.activities.biomart.servicedescriptions.BiomartServiceProvider
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceDescription.java>:[113,17] cannot find symbol
  symbol:   class Configuration
  location: class net.sf.taverna.t2.activities.biomart.servicedescriptions.BiomartServiceDescription
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceDescription.java>:[113,51] cannot find symbol
  symbol:   class Configuration
  location: class net.sf.taverna.t2.activities.biomart.servicedescriptions.BiomartServiceDescription
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityViewFactory.java>:[49,42] cannot find symbol
  symbol:   class Activity
  location: class net.sf.taverna.t2.activities.biomart.views.BiomartActivityViewFactory
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityViewFactory.java>:[49,56] cannot find symbol
  symbol:   class Activity
  location: class net.sf.taverna.t2.activities.biomart.views.BiomartActivityViewFactory
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceProvider.java>:[46,30] cannot find symbol
  symbol:   variable serviceProviderConfig
  location: class net.sf.taverna.t2.activities.biomart.servicedescriptions.BiomartServiceProvider
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceProvider.java>:[132,9] method does not override or implement a method from a supertype
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceProvider.java>:[135,40] cannot find symbol
  symbol:   method getConfiguration()
  location: class net.sf.taverna.t2.activities.biomart.servicedescriptions.BiomartServiceProvider
[INFO] 20 errors 
[INFO] -------------------------------------------------------------
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO] 
[INFO] MartService ........................................ SUCCESS [02:22 min]
[INFO] Taverna 2 Biomart Activity. ........................ SUCCESS [02:19 min]
[INFO] Taverna 2 Biomart Activity UI ...................... FAILURE [01:23 min]
[INFO] Taverna 2 Biomoby Activity ......................... SKIPPED
[INFO] Taverna 2 Biomoby Activity UI ...................... SKIPPED
[INFO] Taverna 2 NCBI web service Activity UI ............. SKIPPED
[INFO] Taverna 2 Soaplab Activity ......................... SKIPPED
[INFO] Taverna 2 Soaplab Activity UI ...................... SKIPPED
[INFO] Apache Taverna Plugin for Bioinformatics ........... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 06:48 min
[INFO] Finished at: 2016-02-27T22:39:11+00:00
[INFO] Final Memory: 36M/308M
[INFO] ------------------------------------------------------------------------
[ERROR] Failed to execute goal org.apache.maven.plugins:maven-compiler-plugin:3.1:compile (default-compile) on project biomart-activity-ui: Compilation failure: Compilation failure:
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceDescription.java>:[34,52] package org.apache.taverna.scufl2.api.configurations does not exist
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceDescription.java>:[112,16] cannot find symbol
[ERROR] symbol:   class Configuration
[ERROR] location: class net.sf.taverna.t2.activities.biomart.servicedescriptions.BiomartServiceDescription
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityContextualView.java>:[47,46] package org.apache.taverna.scufl2.api.activity does not exist
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityContextualView.java>:[59,46] cannot find symbol
[ERROR] symbol:   class Activity
[ERROR] location: class net.sf.taverna.t2.activities.biomart.views.BiomartActivityContextualView
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/actions/BiomartConfigurationPanel.java>:[51,46] package org.apache.taverna.scufl2.api.activity does not exist
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/actions/BiomartConfigurationPanel.java>:[70,42] cannot find symbol
[ERROR] symbol:   class Activity
[ERROR] location: class net.sf.taverna.t2.activities.biomart.actions.BiomartConfigurationPanel
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityViewFactory.java>:[36,46] package org.apache.taverna.scufl2.api.activity does not exist
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityViewFactory.java>:[38,74] cannot find symbol
[ERROR] symbol: class Activity
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityViewFactory.java>:[52,46] cannot find symbol
[ERROR] symbol:   class Activity
[ERROR] location: class net.sf.taverna.t2.activities.biomart.views.BiomartActivityViewFactory
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/actions/BiomartActivityConfigurationAction.java>:[36,46] package org.apache.taverna.scufl2.api.activity does not exist
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/actions/BiomartActivityConfigurationAction.java>:[47,51] cannot find symbol
[ERROR] symbol:   class Activity
[ERROR] location: class net.sf.taverna.t2.activities.biomart.actions.BiomartActivityConfigurationAction
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceProvider.java>:[29,80] type net.sf.taverna.t2.servicedescriptions.AbstractConfigurableServiceProvider does not take parameters
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceProvider.java>:[44,25] cannot find symbol
[ERROR] symbol:   class FindServiceDescriptionsCallBack
[ERROR] location: class net.sf.taverna.t2.activities.biomart.servicedescriptions.BiomartServiceProvider
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceDescription.java>:[113,17] cannot find symbol
[ERROR] symbol:   class Configuration
[ERROR] location: class net.sf.taverna.t2.activities.biomart.servicedescriptions.BiomartServiceDescription
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceDescription.java>:[113,51] cannot find symbol
[ERROR] symbol:   class Configuration
[ERROR] location: class net.sf.taverna.t2.activities.biomart.servicedescriptions.BiomartServiceDescription
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityViewFactory.java>:[49,42] cannot find symbol
[ERROR] symbol:   class Activity
[ERROR] location: class net.sf.taverna.t2.activities.biomart.views.BiomartActivityViewFactory
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/views/BiomartActivityViewFactory.java>:[49,56] cannot find symbol
[ERROR] symbol:   class Activity
[ERROR] location: class net.sf.taverna.t2.activities.biomart.views.BiomartActivityViewFactory
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceProvider.java>:[46,30] cannot find symbol
[ERROR] symbol:   variable serviceProviderConfig
[ERROR] location: class net.sf.taverna.t2.activities.biomart.servicedescriptions.BiomartServiceProvider
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceProvider.java>:[132,9] method does not override or implement a method from a supertype
[ERROR] <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/src/main/java/net/sf/taverna/t2/activities/biomart/servicedescriptions/BiomartServiceProvider.java>:[135,40] cannot find symbol
[ERROR] symbol:   method getConfiguration()
[ERROR] location: class net.sf.taverna.t2.activities.biomart.servicedescriptions.BiomartServiceProvider
[ERROR] -> [Help 1]
[ERROR] 
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR] 
[ERROR] For more information about the errors and possible solutions, please read the following articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException
[ERROR] 
[ERROR] After correcting the problems, you can resume the build with the command
[ERROR]   mvn <goals> -rf :biomart-activity-ui
[JENKINS] Archiving <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomoby-activity-ui/pom.xml> to net.sf.taverna.t2.ui-activities/biomoby-activity-ui/2.0.1-SNAPSHOT/biomoby-activity-ui-2.0.1-SNAPSHOT.pom
No prior successful build to compare, so performing full copy of artifacts
[JENKINS] Archiving <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-soaplab-activity/pom.xml> to net.sf.taverna.t2.activities/soaplab-activity/3.0.1-SNAPSHOT/soaplab-activity-3.0.1-SNAPSHOT.pom
No prior successful build to compare, so performing full copy of artifacts
[JENKINS] Archiving <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomoby-activity/pom.xml> to net.sf.taverna.t2.activities/biomoby-activity/2.0.1-SNAPSHOT/biomoby-activity-2.0.1-SNAPSHOT.pom
No prior successful build to compare, so performing full copy of artifacts
[JENKINS] Archiving <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-martservice/pom.xml> to org.biomart/martservice/2.0.1-SNAPSHOT/martservice-2.0.1-SNAPSHOT.pom
[JENKINS] Archiving <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-martservice/target/martservice-2.0.1-SNAPSHOT.jar> to org.biomart/martservice/2.0.1-SNAPSHOT/martservice-2.0.1-SNAPSHOT.jar
[JENKINS] Archiving <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-martservice/target/martservice-2.0.1-SNAPSHOT-sources.jar> to org.biomart/martservice/2.0.1-SNAPSHOT/martservice-2.0.1-SNAPSHOT-sources.jar
[JENKINS] Archiving <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-martservice/target/martservice-2.0.1-SNAPSHOT-test-sources.jar> to org.biomart/martservice/2.0.1-SNAPSHOT/martservice-2.0.1-SNAPSHOT-test-sources.jar
[JENKINS] Archiving <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-martservice/target/martservice-2.0.1-SNAPSHOT-tests.jar> to org.biomart/martservice/2.0.1-SNAPSHOT/martservice-2.0.1-SNAPSHOT-tests.jar
Compressed 719.38 KB of artifacts by 44.5% relative to #213
[JENKINS] Archiving <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-soaplab-activity-ui/pom.xml> to net.sf.taverna.t2.ui-activities/soaplab-activity-ui/2.0-SNAPSHOT/soaplab-activity-ui-2.0-SNAPSHOT.pom
No prior successful build to compare, so performing full copy of artifacts
[JENKINS] Archiving <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity-ui/pom.xml> to net.sf.taverna.t2.ui-activities/biomart-activity-ui/2.0-SNAPSHOT/biomart-activity-ui-2.0-SNAPSHOT.pom
No prior successful build to compare, so performing full copy of artifacts
[JENKINS] Archiving <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity/pom.xml> to net.sf.taverna.t2.activities/biomart-activity/2.0.1-SNAPSHOT/biomart-activity-2.0.1-SNAPSHOT.pom
[JENKINS] Archiving <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity/target/biomart-activity-2.0.1-SNAPSHOT.jar> to net.sf.taverna.t2.activities/biomart-activity/2.0.1-SNAPSHOT/biomart-activity-2.0.1-SNAPSHOT.jar
[JENKINS] Archiving <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity/target/biomart-activity-2.0.1-SNAPSHOT-sources.jar> to net.sf.taverna.t2.activities/biomart-activity/2.0.1-SNAPSHOT/biomart-activity-2.0.1-SNAPSHOT-sources.jar
[JENKINS] Archiving <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity/target/biomart-activity-2.0.1-SNAPSHOT-test-sources.jar> to net.sf.taverna.t2.activities/biomart-activity/2.0.1-SNAPSHOT/biomart-activity-2.0.1-SNAPSHOT-test-sources.jar
[JENKINS] Archiving <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-biomart-activity/target/biomart-activity-2.0.1-SNAPSHOT-tests.jar> to net.sf.taverna.t2.activities/biomart-activity/2.0.1-SNAPSHOT/biomart-activity-2.0.1-SNAPSHOT-tests.jar
[JENKINS] Archiving <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/taverna-ncbi-activity-ui/pom.xml> to net.sf.taverna.t2.ui-activities/ncbi-activity-ui/3.0.1-SNAPSHOT/ncbi-activity-ui-3.0.1-SNAPSHOT.pom
No prior successful build to compare, so performing full copy of artifacts
[JENKINS] Archiving <https://builds.apache.org/job/incubator-taverna-plugin-bioinformatics/ws/pom.xml> to org.apache.taverna.bioinformatics/apache-taverna-plugin-bioinformatics/3.1.0-incubating-SNAPSHOT/apache-taverna-plugin-bioinformatics-3.1.0-incubating-SNAPSHOT.pom
No prior successful build to compare, so performing full copy of artifacts
channel stopped