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Posted to issues@airavata.apache.org by "Eroma (JIRA)" <ji...@apache.org> on 2019/06/20 16:45:00 UTC
[jira] [Closed] (AIRAVATA-2995) Cloned experiment was able to
submit without mandatory input files.
[ https://issues.apache.org/jira/browse/AIRAVATA-2995?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Eroma closed AIRAVATA-2995.
---------------------------
This was tested in https://gateway.simvascular.org
was able to clone an experiment without the files and when tried to submit without the files it was stopped with a pop us requiring the files to be attached.
After the files were attached the job was launched and queued successfully.
Job also completed successfully with output files.
> Cloned experiment was able to submit without mandatory input files.
> -------------------------------------------------------------------
>
> Key: AIRAVATA-2995
> URL: https://issues.apache.org/jira/browse/AIRAVATA-2995
> Project: Airavata
> Issue Type: Bug
> Components: PGA PHP Web Gateway
> Affects Versions: 0.18
> Environment: https://gateway.simvascular.org
> Reporter: Eroma
> Assignee: Marcus Christie
> Priority: Major
> Fix For: 0.18
>
>
> # Cloned an expriment without input files (files removed as part of strage cleaning process)
> # The new cloned one (Clone_of_Test-Sim1_3bd871fa-09b6-494e-b71b-811ce548880b) was able to save and launch without the input files.
> # experiment in CREATED, not moving further or failing.
> # Error in api log : 2019-03-13 01:47:35,348 [pool-31-thread-5] ERROR o.a.a.o.s.OrchestratorServerHandler experiment_id=Clone_of_Test-Sim1_3bd871fa-09b6-494e-b71b-811ce548880b, gateway_id=simvascular - Experiment launch failed due to Thrift conversion error, experimentId: Clone_of_Test-Sim1_3bd871fa-09b6-494e-b71b-811ce548880b, gatewayId: simvascular
> org.apache.thrift.TException: Experiment 'Clone_of_Test-Sim1_3bd871fa-09b6-494e-b71b-811ce548880b' launch failed. Unable to figureout execution type for application SimVascular_3fe8243b-0191-499e-a2ec-9d77fde9ce36
> at org.apache.airavata.orchestrator.server.OrchestratorServerHandler.launchExperiment(OrchestratorServerHandler.java:251)
> at org.apache.airavata.orchestrator.server.OrchestratorServerHandler.launchExperiment(OrchestratorServerHandler.java:666)
> at org.apache.airavata.orchestrator.server.OrchestratorServerHandler.access$500(OrchestratorServerHandler.java:76)
> at org.apache.airavata.orchestrator.server.OrchestratorServerHandler$ExperimentHandler.onMessage(OrchestratorServerHandler.java:622)
> at org.apache.airavata.messaging.core.impl.ExperimentConsumer.handleDelivery(ExperimentConsumer.java:84)
> at com.rabbitmq.client.impl.ConsumerDispatcher$5.run(ConsumerDispatcher.java:144)
> at com.rabbitmq.client.impl.ConsumerWorkService$WorkPoolRunnable.run(ConsumerWorkService.java:99)
> at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
> at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
> at java.lang.Thread.run(Thread.java:748)
> Caused by: java.lang.NullPointerException: null
> at org.apache.airavata.orchestrator.server.OrchestratorServerHandler.lambda$launchExperiment$2(OrchestratorServerHandler.java:178)
> at java.util.ArrayList$ArrayListSpliterator.forEachRemaining(ArrayList.java:1374)
> at java.util.stream.ReferencePipeline$Head.forEach(ReferencePipeline.java:580)
> at org.apache.airavata.orchestrator.server.OrchestratorServerHandler.launchExperiment(OrchestratorServerHandler.java:177)
> ... 9 common frames omitted
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