[jira] [Commented] (ARROW-2247) [Python] Statically-linking boost_regex in both libarrow and libparquet results in segfault

["Deepak Majeti (JIRA)" <ji...@apache.org>]

    [ https://issues.apache.org/jira/browse/ARROW-2247?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16428528#comment-16428528 ] 

Deepak Majeti commented on ARROW-2247:
--------------------------------------

https://issues.apache.org/jira/browse/PARQUET-1265 probably is a fix for this issue.

> [Python] Statically-linking boost_regex in both libarrow and libparquet results in segfault
> -------------------------------------------------------------------------------------------
>
>                 Key: ARROW-2247
>                 URL: https://issues.apache.org/jira/browse/ARROW-2247
>             Project: Apache Arrow
>          Issue Type: Bug
>            Reporter: Wes McKinney
>            Priority: Major
>
> This is a backtrace loading {{libparquet.so}} on Ubuntu 14.04 using boost 1.66.1 from conda-forge. Both libarrow and libparquet contain {{boost_regex}} statically linked. 
> {code}
> In [1]: import ctypes
> In [2]: ctypes.CDLL('libparquet.so')
> Program received signal SIGSEGV, Segmentation fault.
> 0x00007fffed4ad3fb in std::basic_string<char, std::char_traits<char>, std::allocator<char> >::basic_string(std::string const&) () from /usr/lib/x86_64-linux-gnu/libstdc++.so.6
> (gdb) bt
> #0  0x00007fffed4ad3fb in std::basic_string<char, std::char_traits<char>, std::allocator<char> >::basic_string(std::string const&) () from /usr/lib/x86_64-linux-gnu/libstdc++.so.6
> #1  0x00007fffed74c1fc in boost::re_detail_106600::cpp_regex_traits_char_layer<char>::init() ()
>    from /home/wesm/cpp-toolchain/lib/libboost_regex.so.1.66.0
> #2  0x00007fffed794803 in boost::object_cache<boost::re_detail_106600::cpp_regex_traits_base<char>, boost::re_detail_106600::cpp_regex_traits_implementation<char> >::do_get(boost::re_detail_106600::cpp_regex_traits_base<char> const&, unsigned long) () from /home/wesm/cpp-toolchain/lib/libboost_regex.so.1.66.0
> #3  0x00007fffed79e62b in boost::basic_regex<char, boost::regex_traits<char, boost::cpp_regex_traits<char> > >::do_assign(char const*, char const*, unsigned int) () from /home/wesm/cpp-toolchain/lib/libboost_regex.so.1.66.0
> #4  0x00007fffee58561b in boost::basic_regex<char, boost::regex_traits<char, boost::cpp_regex_traits<char> > >::assign (this=0x7fffffff3780, 
>     p1=0x7fffee600602 "(.*?)\\s*(?:(version\\s*(?:([^(]*?)\\s*(?:\\(\\s*build\\s*([^)]*?)\\s*\\))?)?)?)", 
>     p2=0x7fffee60064a "", f=0) at /home/wesm/cpp-toolchain/include/boost/regex/v4/basic_regex.hpp:381
> #5  0x00007fffee5855a7 in boost::basic_regex<char, boost::regex_traits<char, boost::cpp_regex_traits<char> > >::assign (this=0x7fffffff3780, 
>     p=0x7fffee600602 "(.*?)\\s*(?:(version\\s*(?:([^(]*?)\\s*(?:\\(\\s*build\\s*([^)]*?)\\s*\\))?)?)?)", f=0)
>     at /home/wesm/cpp-toolchain/include/boost/regex/v4/basic_regex.hpp:366
> #6  0x00007fffee5683f3 in boost::basic_regex<char, boost::regex_traits<char, boost::cpp_regex_traits<char> > >::basic_regex (this=0x7fffffff3780, 
>     p=0x7fffee600602 "(.*?)\\s*(?:(version\\s*(?:([^(]*?)\\s*(?:\\(\\s*build\\s*([^)]*?)\\s*\\))?)?)?)", f=0)
>     at /home/wesm/cpp-toolchain/include/boost/regex/v4/basic_regex.hpp:335
> #7  0x00007fffee5656d0 in parquet::ApplicationVersion::ApplicationVersion (
> Python Exception <class 'gdb.error'> There is no member named _M_dataplus.: 
>     this=0x7fffee8f1fb8 <parquet::ApplicationVersion::PARQUET_251_FIXED_VERSION>, created_by=)
>     at ../src/parquet/metadata.cc:452
> #8  0x00007fffee41c271 in __cxx_global_var_init.1(void) () at ../src/parquet/metadata.cc:35
> #9  0x00007fffee41c44e in _GLOBAL__sub_I_metadata.tmp.wesm_desktop.4838.ii ()
>    from /home/wesm/local/lib/libparquet.so
> #10 0x00007ffff7dea1da in call_init (l=<optimized out>, argc=argc@entry=2, argv=argv@entry=0x7fffffff5d88, 
>     env=env@entry=0x7fffffff5da0) at dl-init.c:78
> #11 0x00007ffff7dea2c3 in call_init (env=<optimized out>, argv=<optimized out>, argc=<optimized out>, 
>     l=<optimized out>) at dl-init.c:36
> #12 _dl_init (main_map=main_map@entry=0x13fb220, argc=2, argv=0x7fffffff5d88, env=0x7fffffff5da0)
>     at dl-init.c:126
> {code}
> This seems to be caused by static initializations in libparquet:
> https://github.com/apache/parquet-cpp/blob/master/src/parquet/metadata.cc#L34
> We should see if removing these static initializations makes the problem go away. If not, then statically-linking boost_regex in both libraries is not advisable.
> For this reason and more, I really wish that Arrow and Parquet shared a common build system and monorepo structure -- it would make handling these toolchain and build-related issues much simpler. 



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