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Posted to reviews@spark.apache.org by davies <gi...@git.apache.org> on 2014/12/10 21:16:11 UTC
[GitHub] spark pull request: [SPARK-2951] [PySpark] support unpickle array....
GitHub user davies opened a pull request:
https://github.com/apache/spark/pull/3668
[SPARK-2951] [PySpark] support unpickle array.array for Python 2.6 (port to 1.0)
Pyrolite can not unpickle array.array which pickled by Python 2.6, this patch fix it by extend Pyrolite.
There is a bug in Pyrolite when unpickle array of float/double, this patch workaround it by reverse the endianness for float/double. This workaround should be removed after Pyrolite have a new release to fix this issue.
I had send an PR to Pyrolite to fix it: https://github.com/irmen/Pyrolite/pull/11
You can merge this pull request into a Git repository by running:
$ git pull https://github.com/davies/spark port_2365
Alternatively you can review and apply these changes as the patch at:
https://github.com/apache/spark/pull/3668.patch
To close this pull request, make a commit to your master/trunk branch
with (at least) the following in the commit message:
This closes #3668
----
commit 7c55cff04b7d7d0b37650f1c5572cf54e531b7e6
Author: Davies Liu <da...@gmail.com>
Date: 2014-09-16T01:57:25Z
[SPARK-2951] [PySpark] support unpickle array.array for Python 2.6
Pyrolite can not unpickle array.array which pickled by Python 2.6, this patch fix it by extend Pyrolite.
There is a bug in Pyrolite when unpickle array of float/double, this patch workaround it by reverse the endianness for float/double. This workaround should be removed after Pyrolite have a new release to fix this issue.
I had send an PR to Pyrolite to fix it: https://github.com/irmen/Pyrolite/pull/11
Author: Davies Liu <da...@gmail.com>
Closes #2365 from davies/pickle and squashes the following commits:
f44f771 [Davies Liu] enable tests about array
3908f5c [Davies Liu] Merge branch 'master' into pickle
c77c87b [Davies Liu] cleanup debugging code
60e4e2f [Davies Liu] support unpickle array.array for Python 2.6
Conflicts:
core/src/main/scala/org/apache/spark/api/python/SerDeUtil.scala
python/pyspark/tests.py
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[GitHub] spark pull request: [SPARK-2951] [PySpark] support unpickle array....
Posted by andrewor14 <gi...@git.apache.org>.
Github user andrewor14 commented on the pull request:
https://github.com/apache/spark/pull/3668#issuecomment-66535731
@davies would you mind squeezing all of that into this PR so we can fix the build once and for all?
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[GitHub] spark pull request: [SPARK-2951] [PySpark] support unpickle array....
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the pull request:
https://github.com/apache/spark/pull/3668#issuecomment-66530294
[Test build #24318 has finished](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/24318/consoleFull) for PR 3668 at commit [`7c55cff`](https://github.com/apache/spark/commit/7c55cff04b7d7d0b37650f1c5572cf54e531b7e6).
* This patch **fails some tests**.
* This patch merges cleanly.
* This patch adds no public classes.
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[GitHub] spark pull request: [PySpark] Fix tests with Python 2.6 in 1.0 bra...
Posted by davies <gi...@git.apache.org>.
Github user davies commented on the pull request:
https://github.com/apache/spark/pull/3668#issuecomment-66537579
@andrewor14 I had added those two commits.
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[GitHub] spark pull request: [PySpark] Fix tests with Python 2.6 in 1.0 bra...
Posted by JoshRosen <gi...@git.apache.org>.
Github user JoshRosen commented on the pull request:
https://github.com/apache/spark/pull/3668#issuecomment-66820975
Jenkins, retest this please.
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[GitHub] spark pull request: [PySpark] Fix tests with Python 2.6 in 1.0 bra...
Posted by andrewor14 <gi...@git.apache.org>.
Github user andrewor14 commented on the pull request:
https://github.com/apache/spark/pull/3668#issuecomment-66670110
Yeah branch 0.9 is also having the same problem. I haven't looked deep into the issue yet but maybe @shaneknapp has a better idea?
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[GitHub] spark pull request: [SPARK-2951] [PySpark] support unpickle array....
Posted by AmplabJenkins <gi...@git.apache.org>.
Github user AmplabJenkins commented on the pull request:
https://github.com/apache/spark/pull/3668#issuecomment-66530312
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[GitHub] spark pull request: [PySpark] Fix tests with Python 2.6 in 1.0 bra...
Posted by andrewor14 <gi...@git.apache.org>.
Github user andrewor14 commented on the pull request:
https://github.com/apache/spark/pull/3668#issuecomment-66708521
Great thanks Shane.
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[GitHub] spark pull request: [PySpark] Fix tests with Python 2.6 in 1.0 bra...
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the pull request:
https://github.com/apache/spark/pull/3668#issuecomment-66820419
[Test build #24412 has finished](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/24412/consoleFull) for PR 3668 at commit [`b32583d`](https://github.com/apache/spark/commit/b32583dee4e9850d201a11d035bb8912c158c38e).
* This patch **fails some tests**.
* This patch merges cleanly.
* This patch adds no public classes.
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[GitHub] spark pull request: [PySpark] Fix tests with Python 2.6 in 1.0 bra...
Posted by davies <gi...@git.apache.org>.
Github user davies commented on the pull request:
https://github.com/apache/spark/pull/3668#issuecomment-66569422
@andrewor14 The failed test may be related to the version of NumPy, I can not reproduce it with 1.8.1
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[GitHub] spark pull request: [PySpark] Fix tests with Python 2.6 in 1.0 bra...
Posted by shaneknapp <gi...@git.apache.org>.
Github user shaneknapp commented on the pull request:
https://github.com/apache/spark/pull/3668#issuecomment-66677019
would you guys be adverse to me upping the numpy version on the workers? currently, we're running numpy-1.4.1-9.el6.x86_64, which is ancient compared to the L&G release (1.9.1).
anyone know of any backwards-compatibility issues offhand? in the meanwhile, i will set up one of our staging nodes and start testing.
i'd rather not to a system-wide update during a release cycle if at all possible... but if i have to do this, i will bring up some new jenkins workers (which i was going to do during tomorrow morning's maintanence anyways) w/an updated numpy specifically for these buids.
since i'm not too familiar w/the codebase, i'll leave that part to you guys for now. :)
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[GitHub] spark pull request: [PySpark] Fix tests with Python 2.6 in 1.0 bra...
Posted by AmplabJenkins <gi...@git.apache.org>.
Github user AmplabJenkins commented on the pull request:
https://github.com/apache/spark/pull/3668#issuecomment-66820443
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[GitHub] spark pull request: [PySpark] Fix tests with Python 2.6 in 1.0 bra...
Posted by andrewor14 <gi...@git.apache.org>.
Github user andrewor14 commented on the pull request:
https://github.com/apache/spark/pull/3668#issuecomment-66680979
Yeah I think the case is that in branch 0.9 we still require numpy 1.7 but later branches require only 1.4. For branch-1.0, however, it fails with some other error that I would assume is because we need a more recent version of numpy that is explicitly required.
I think we should just upgrade it, since I think it's unlikely that we'll be pushing more commits into the current RC.
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[GitHub] spark pull request: [PySpark] Fix tests with Python 2.6 in 1.0 bra...
Posted by shaneknapp <gi...@git.apache.org>.
Github user shaneknapp commented on the pull request:
https://github.com/apache/spark/pull/3668#issuecomment-66835922
woot! :)
On Fri, Dec 12, 2014 at 12:47 PM, UCB AMPLab <no...@github.com>
wrote:
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> <https://github.com/apache/spark/pull/3668#issuecomment-66832650>.
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[GitHub] spark pull request: [SPARK-2951] [PySpark] support unpickle array....
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the pull request:
https://github.com/apache/spark/pull/3668#issuecomment-66517161
[Test build #24318 has started](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/24318/consoleFull) for PR 3668 at commit [`7c55cff`](https://github.com/apache/spark/commit/7c55cff04b7d7d0b37650f1c5572cf54e531b7e6).
* This patch merges cleanly.
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[GitHub] spark pull request: [PySpark] Fix tests with Python 2.6 in 1.0 bra...
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the pull request:
https://github.com/apache/spark/pull/3668#issuecomment-66537513
[Test build #24324 has started](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/24324/consoleFull) for PR 3668 at commit [`14ad3d9`](https://github.com/apache/spark/commit/14ad3d901f4d3a7a8d28c169abbf9ad6c8614b1e).
* This patch merges cleanly.
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[GitHub] spark pull request: [PySpark] Fix tests with Python 2.6 in 1.0 bra...
Posted by JoshRosen <gi...@git.apache.org>.
Github user JoshRosen commented on the pull request:
https://github.com/apache/spark/pull/3668#issuecomment-67094882
Do you mind closing this PR since Andrew has merged it into branch-1.0 (9c213160ee3c7e6970152c15a689056a6671c04d)? GitHub can't auto-close it since it's not against the master branch.
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[GitHub] spark pull request: [PySpark] Fix tests with Python 2.6 in 1.0 bra...
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the pull request:
https://github.com/apache/spark/pull/3668#issuecomment-66538155
[Test build #24326 has started](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/24326/consoleFull) for PR 3668 at commit [`bda1c72`](https://github.com/apache/spark/commit/bda1c721e1e691b77a0ba1fd4291278b6be42d6f).
* This patch merges cleanly.
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[GitHub] spark pull request: [PySpark] Fix tests with Python 2.6 in 1.0 bra...
Posted by andrewor14 <gi...@git.apache.org>.
Github user andrewor14 commented on the pull request:
https://github.com/apache/spark/pull/3668#issuecomment-66862913
Nice! I'm merging this.
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[GitHub] spark pull request: [PySpark] Fix tests with Python 2.6 in 1.0 bra...
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the pull request:
https://github.com/apache/spark/pull/3668#issuecomment-66832642
[Test build #24414 has finished](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/24414/consoleFull) for PR 3668 at commit [`b32583d`](https://github.com/apache/spark/commit/b32583dee4e9850d201a11d035bb8912c158c38e).
* This patch **passes all tests**.
* This patch merges cleanly.
* This patch adds no public classes.
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[GitHub] spark pull request: [PySpark] Fix tests with Python 2.6 in 1.0 bra...
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the pull request:
https://github.com/apache/spark/pull/3668#issuecomment-66560059
[Test build #24337 has finished](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/24337/consoleFull) for PR 3668 at commit [`b32583d`](https://github.com/apache/spark/commit/b32583dee4e9850d201a11d035bb8912c158c38e).
* This patch **fails some tests**.
* This patch merges cleanly.
* This patch adds no public classes.
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[GitHub] spark pull request: [PySpark] Fix tests with Python 2.6 in 1.0 bra...
Posted by AmplabJenkins <gi...@git.apache.org>.
Github user AmplabJenkins commented on the pull request:
https://github.com/apache/spark/pull/3668#issuecomment-66560063
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[GitHub] spark pull request: [PySpark] Fix tests with Python 2.6 in 1.0 bra...
Posted by shaneknapp <gi...@git.apache.org>.
Github user shaneknapp commented on the pull request:
https://github.com/apache/spark/pull/3668#issuecomment-66702325
ok, sgtm. since we're not blocking the release, i'll just get everything staged and do the upgrade during the scheduled maintenance tomorrow morning.
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[GitHub] spark pull request: [PySpark] Fix tests with Python 2.6 in 1.0 bra...
Posted by davies <gi...@git.apache.org>.
Github user davies closed the pull request at:
https://github.com/apache/spark/pull/3668
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[GitHub] spark pull request: [PySpark] Fix tests with Python 2.6 in 1.0 bra...
Posted by AmplabJenkins <gi...@git.apache.org>.
Github user AmplabJenkins commented on the pull request:
https://github.com/apache/spark/pull/3668#issuecomment-66832650
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[GitHub] spark pull request: [SPARK-2951] [PySpark] support unpickle array....
Posted by JoshRosen <gi...@git.apache.org>.
Github user JoshRosen commented on the pull request:
https://github.com/apache/spark/pull/3668#issuecomment-66531405
Looks like we also need to backport #1874 so that the tests can work on Python 2.6?
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[GitHub] spark pull request: [PySpark] Fix tests with Python 2.6 in 1.0 bra...
Posted by JoshRosen <gi...@git.apache.org>.
Github user JoshRosen commented on the pull request:
https://github.com/apache/spark/pull/3668#issuecomment-66808051
Jenkins, retest this please.
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[GitHub] spark pull request: [PySpark] Fix tests with Python 2.6 in 1.0 bra...
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the pull request:
https://github.com/apache/spark/pull/3668#issuecomment-66808447
[Test build #24412 has started](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/24412/consoleFull) for PR 3668 at commit [`b32583d`](https://github.com/apache/spark/commit/b32583dee4e9850d201a11d035bb8912c158c38e).
* This patch merges cleanly.
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[GitHub] spark pull request: [PySpark] Fix tests with Python 2.6 in 1.0 bra...
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the pull request:
https://github.com/apache/spark/pull/3668#issuecomment-66821299
[Test build #24414 has started](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/24414/consoleFull) for PR 3668 at commit [`b32583d`](https://github.com/apache/spark/commit/b32583dee4e9850d201a11d035bb8912c158c38e).
* This patch merges cleanly.
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