[06/50] [abbrv] incubator-taverna-plugin-bioinformatics git commit: taverna-biomart-martservice/

[st...@apache.org]

http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/9e08cac0/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java
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diff --git a/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java b/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java
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+/*
+ * Copyright (C) 2003 The University of Manchester 
+ *
+ * Modifications to the initial code base are copyright of their
+ * respective authors, or their employers as appropriate.  Authorship
+ * of the modifications may be determined from the ChangeLog placed at
+ * the end of this file.
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU Lesser General Public License
+ * as published by the Free Software Foundation; either version 2.1 of
+ * the License, or (at your option) any later version.
+ * 
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+ * Lesser General Public License for more details.
+ * 
+ * You should have received a copy of the GNU Lesser General Public
+ * License along with this program; if not, write to the Free Software
+ * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
+ * USA.
+ *
+ ****************************************************************
+ * Source code information
+ * -----------------------
+ * Filename           $RCSfile: QueryTest.java,v $
+ * Revision           $Revision: 1.3 $
+ * Release status     $State: Exp $
+ * Last modified on   $Date: 2007/10/01 12:11:30 $
+ *               by   $Author: davidwithers $
+ * Created on 03-May-2006
+ *****************************************************************/
+package org.biomart.martservice.query;
+
+import junit.framework.TestCase;
+
+/**
+ * 
+ * @author David Withers
+ */
+public class QueryTest extends TestCase {
+	private String attributeName;
+
+	private Attribute attribute;
+
+	private String filterName;
+
+	private String filterValue;
+
+	private Filter filter;
+
+	private Link link;
+
+	private String datasetName;
+
+	private Dataset dataset;
+
+	private String virtualSchemaName;
+	
+	private String softwareVersion;
+	
+	private String formatter;
+
+	private Query query;
+	
+	/*
+	 * @see TestCase#setUp()
+	 */
+	protected void setUp() throws Exception {
+		super.setUp();
+		attributeName = "attribute name";
+		attribute = new Attribute(attributeName);
+
+		filterName = "filter name";
+		filterValue = "filter value";
+		filter = new Filter(filterName, filterValue);
+
+		link = new Link("source", "target", "id");
+
+		datasetName = "dataset name";
+		dataset = new Dataset(datasetName);
+
+		dataset.addAttribute(attribute);
+		dataset.addFilter(filter);
+
+		virtualSchemaName = "default";
+		
+		softwareVersion = "software version";
+		
+		formatter = "page formatter";
+		
+		query = new Query(virtualSchemaName);
+	}
+
+	/*
+	 * Test method for 'org.biomart.martservice.query.Query.Query(String)'
+	 */
+	public final void testQueryString() {
+		Query query = new Query(virtualSchemaName);
+		assertEquals("virtualSchemaName should be '" + virtualSchemaName + "'",
+				query.getVirtualSchemaName(), virtualSchemaName);
+		assertEquals("count should be '0'", query.getCount(), 0);
+	}
+
+	/*
+	 * Test method for 'org.biomart.martservice.query.Query.Query(String, int)'
+	 */
+	public final void testQueryStringInt() {
+		Query query = new Query(virtualSchemaName, 1);
+		assertEquals("virtualSchemaName should be '" + virtualSchemaName + "'",
+				query.getVirtualSchemaName(), virtualSchemaName);
+		assertEquals("count should be '1'", query.getCount(), 1);
+	}
+
+	/*
+	 * Test method for 'org.biomart.martservice.query.Query.Query(Query)'
+	 */
+	public final void testQueryQuery() {
+		query.addDataset(dataset);
+		query.addLink(link);
+		query.setCount(1);
+		query.setUniqueRows(1);
+		query.setSoftwareVersion(softwareVersion);
+		query.setFormatter(formatter);
+		Query copy = new Query(query);
+		assertEquals(copy.getDatasets().size(), 1);
+		assertEquals(copy.getAttributes().size(), 1);
+		assertEquals(copy.getFilters().size(), 1);
+		assertEquals(copy.getLinks().size(), 1);
+		assertEquals(copy.getCount(), 1);
+		assertEquals(copy.getUniqueRows(), 1);
+		assertEquals(copy.getSoftwareVersion(), softwareVersion);
+		assertEquals(copy.getFormatter(), formatter);
+	}
+
+	/*
+	 * Test method for
+	 * 'org.biomart.martservice.query.Query.getVirtualSchemaName()'
+	 */
+	public final void testGetVirtualSchemaName() {
+		assertEquals("virtualSchemaName should be '" + virtualSchemaName + "'",
+				query.getVirtualSchemaName(), virtualSchemaName);
+	}
+
+	/*
+	 * Test method for
+	 * 'org.biomart.martservice.query.Query.setVirtualSchemaName(String)'
+	 */
+	public final void testSetVirtualSchemaName() {
+		String newVirtualSchemaName = "new virtual schema name";
+		query.setVirtualSchemaName(newVirtualSchemaName);
+		assertEquals("virtualSchemaName should be '" + newVirtualSchemaName
+				+ "'", query.getVirtualSchemaName(), newVirtualSchemaName);
+	}
+
+	/*
+	 * Test method for 'org.biomart.martservice.query.Query.getCount()'
+	 */
+	public final void testGetCount() {
+		assertEquals("count should be '0'", query.getCount(), 0);
+	}
+
+	/*
+	 * Test method for 'org.biomart.martservice.query.Query.setCount(int)'
+	 */
+	public final void testSetCount() {
+		query.setCount(1);
+		assertEquals("count should be '1'", query.getCount(), 1);
+	}
+
+	/*
+	 * Test method for 'org.biomart.martservice.query.Query.getUniqueRows()'
+	 */
+	public final void testGetUniqueRows() {
+		assertEquals("uniqueRows should be '0'", query.getUniqueRows(), 0);
+	}
+
+	/*
+	 * Test method for 'org.biomart.martservice.query.Query.setUniqueRows(int)'
+	 */
+	public final void testSetUniqueRows() {
+		query.setUniqueRows(1);
+		assertEquals("uniqueRows should be '1'", query.getUniqueRows(), 1);
+	}
+
+	/*
+	 * Test method for 'org.biomart.martservice.query.Query.getSoftwareVersion()'
+	 */
+	public final void testGetSoftwareVersion() {
+		assertNull("softwareVersion should be null", query.getSoftwareVersion());
+	}
+
+	/*
+	 * Test method for 'org.biomart.martservice.query.Query.setSoftwareVersion(String)'
+	 */
+	public final void testSetSoftwareVersion() {
+		String newSoftwareVersion = "new software version";
+		query.setSoftwareVersion(newSoftwareVersion);
+		assertEquals("softwareVersion should be '" + newSoftwareVersion + "'", query.getSoftwareVersion(), newSoftwareVersion);
+	}
+
+	/*
+	 * Test method for 'org.biomart.martservice.query.Query.getFormatter()'
+	 */
+	public final void testGetFormatter() {
+		assertNull("formatter should be null", query.getFormatter());
+	}
+
+	/*
+	 * Test method for 'org.biomart.martservice.query.Query.setFormatter(String)'
+	 */
+	public final void testSetFormatter() {
+		String newFormatter = "new formatter";
+		query.setFormatter(newFormatter);
+		assertEquals("formatter should be '" + newFormatter + "'", query.getFormatter(), newFormatter);
+	}
+
+	/*
+	 * Test method for 'org.biomart.martservice.query.Query.getRequestId()'
+	 */
+	public final void testGetRequestId() {
+		assertNull("requestId should be null", query.getRequestId());
+	}
+
+	/*
+	 * Test method for 'org.biomart.martservice.query.Query.setnewRequestId(String)'
+	 */
+	public final void testSetRequestId() {
+		String newRequestId = "new RequestId";
+		query.setRequestId(newRequestId);
+		assertEquals("requestId should be '" + newRequestId + "'", query.getRequestId(), newRequestId);
+	}
+
+	/*
+	 * Test method for 'org.biomart.martservice.query.Query.addDataset(Dataset)'
+	 */
+	public final void testAddDataset() {
+		query.addDataset(dataset);
+		assertEquals(query.getDatasets().size(), 1);
+		assertSame(query.getDatasets().get(0), dataset);
+	}
+
+	/*
+	 * Test method for
+	 * 'org.biomart.martservice.query.Query.removeDataset(Dataset)'
+	 */
+	public final void testRemoveDataset() {
+		query.addDataset(dataset);
+		query.removeDataset(dataset);
+		assertEquals(query.getDatasets().size(), 0);
+	}
+
+	/*
+	 * Test method for 'org.biomart.martservice.query.Query.getDatasets()'
+	 */
+	public final void testGetDatasets() {
+		query.addDataset(dataset);
+		assertEquals(query.getDatasets().size(), 1);
+		assertSame(query.getDatasets().get(0), dataset);
+	}
+
+	/*
+	 * Test method for 'org.biomart.martservice.query.Query.getDataset(String)'
+	 */
+	public final void testGetDataset() {
+		query.addDataset(dataset);
+		assertSame(query.getDataset(dataset.getName()), dataset);
+	}
+
+	/*
+	 * Test method for 'org.biomart.martservice.query.Query.getAttributes()'
+	 */
+	public final void testGetAttributes() {
+		query.addDataset(dataset);
+		assertEquals(query.getAttributes().size(), 1);
+		assertSame(query.getAttributes().get(0), attribute);
+	}
+
+	/*
+	 * Test method for 'org.biomart.martservice.query.Query.getFilters()'
+	 */
+	public final void testGetFilters() {
+		query.addDataset(dataset);
+		assertEquals(query.getFilters().size(), 1);
+		assertSame(query.getFilters().get(0), filter);
+	}
+
+	/*
+	 * Test method for
+	 * 'org.biomart.martservice.query.Query.addQueryListener(QueryListener)'
+	 */
+	public final void testAddQueryListener() {
+	}
+
+	/*
+	 * Test method for
+	 * 'org.biomart.martservice.query.Query.removeQueryListener(QueryListener)'
+	 */
+	public final void testRemoveQueryListener() {
+	}
+
+}