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Posted to commits@ctakes.apache.org by bu...@apache.org on 2015/03/05 23:26:24 UTC
svn commit: r942510 - in /websites/staging/ctakes/trunk: cgi-bin/ content/
Author: buildbot
Date: Thu Mar 5 22:26:23 2015
New Revision: 942510
Log:
Staging update by buildbot for ctakes
Modified:
websites/staging/ctakes/trunk/cgi-bin/ (props changed)
websites/staging/ctakes/trunk/content/ (props changed)
websites/staging/ctakes/trunk/content/community.html
websites/staging/ctakes/trunk/content/downloads.html
websites/staging/ctakes/trunk/content/examples.html
websites/staging/ctakes/trunk/content/faq.html
websites/staging/ctakes/trunk/content/history.html
websites/staging/ctakes/trunk/content/index.html
websites/staging/ctakes/trunk/content/mailing.html
websites/staging/ctakes/trunk/content/people.html
websites/staging/ctakes/trunk/content/sitemap.html
websites/staging/ctakes/trunk/content/sponsors.html
websites/staging/ctakes/trunk/content/template.html
websites/staging/ctakes/trunk/content/tutorials.html
websites/staging/ctakes/trunk/content/usedby.html
websites/staging/ctakes/trunk/content/whycTAKES.html
Propchange: websites/staging/ctakes/trunk/cgi-bin/
------------------------------------------------------------------------------
--- cms:source-revision (original)
+++ cms:source-revision Thu Mar 5 22:26:23 2015
@@ -1 +1 @@
-1664509
+1664512
Propchange: websites/staging/ctakes/trunk/content/
------------------------------------------------------------------------------
--- cms:source-revision (original)
+++ cms:source-revision Thu Mar 5 22:26:23 2015
@@ -1 +1 @@
-1664509
+1664512
Modified: websites/staging/ctakes/trunk/content/community.html
==============================================================================
--- websites/staging/ctakes/trunk/content/community.html (original)
+++ websites/staging/ctakes/trunk/content/community.html Thu Mar 5 22:26:23 2015
@@ -127,62 +127,7 @@
</nav>
<!--- BEGIN MAIN CONTENT -->
- <div class="container main">
- <div class="row">
- <h1> Ways to Get Involved </h1>
-
- <p> You don't need to be a software developer to contribute to Apache cTAKES. To be successful this project
- requires a range of different skills, levels of involvement and degrees of technical expertise. So, if you want
- to get involved in cTAKES, there is almost certainly a role for you.
- </p>
-
- <p> We are looking for people to:
-
- <ul>
- <li>Provide feedback</li>
- <li>Ask and answer questions on mailing lists</li>
- <li>Write or update documentation</li>
- <li>Help new users</li>
- <li>Recommend the project to others</li>
- <li>Test the code and report bugs</li>
- <li>Fix bugs</li>
- <li>Give us feedback on required features</li>
- <li>Write and update the software</li>
- <li>Create artwork</li>
- <li>Anything you can see that needs doing</li>
- </ul>
- </p>
-
- <p>
- All of these contributions help to keep a project active and strengthen the community. The project team and the
- broader community will therefore welcome and encourage participation, and attempt to make it as easy as
- possible for people to get involved. Apache defines it this way.
- </p>
-
- <h2> Steps of Involvement </h2>
-
- <p> Your first engagement with the project would probably be to subscribe to our mailing lists
- and to try out cTAKES as a user. If this fits the bill or you see something you'd like to improve then possibly
- modify code or make other enhancements. After working with the community for a little bit you will be
- recognized as someone who should have write access. Being a committee member may be in your future. To begin
- down this path see the Getting Started pages.
- </p>
-
- <h2> Decision Making </h2>
-
- <p> The most important thing about engaging with any Apache project is that everyone is equal. All people with an
- opinion are entitled to express that opinion and, where appropriate, have it considered by the community. </p>
-
- <p> To some the idea of having to establish consensus in a large and distributed team sounds inefficient and
- frustrating. Don't despair though, The Apache Way has a set of simple processes to ensure things proceed at a
- good pace.
- </p>
-
- </div>
- <!-- end row -->
-
-</div>
-<!-- end main div -->
+
<!--- END MAIN CONTENT -->
<footer class="small">
Modified: websites/staging/ctakes/trunk/content/downloads.html
==============================================================================
--- websites/staging/ctakes/trunk/content/downloads.html (original)
+++ websites/staging/ctakes/trunk/content/downloads.html Thu Mar 5 22:26:23 2015
@@ -127,188 +127,7 @@
</nav>
<!--- BEGIN MAIN CONTENT -->
- <div class="container">
- <div class="row">
- <h1>Download cTAKES&trade;</h1>
- <p>
- <strong>Current Version:</strong> 3.2.1 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
- <strong>Released:</strong> December 10, 2014 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
- ( <a href="http://s.apache.org/ctakes-3.2.1-release-notes">Release Notes</a> /
- <a href="http://svn.apache.org/repos/asf/ctakes/tags/ctakes-3.2.1-rc2">SVN Tag</a> )
- </p>
- </div>
- <div class="col-xs-12 col-sm-12">
- <div class="row" id="preq-container">
- <h4>Prerequisites:</h4>
- <ul>
- <li><strong>All Users:</strong>
- <ul>
- <li><a href="https://www.oracle.com/java/index.html">Oracle <sup>&reg;</sup> Java</a>&trade; 1.7 or
- higher
- </li>
- </ul>
- </li>
- <li><strong>Dictionary Users:</strong>
- <ul>
- <li><a href="https://uts.nlm.nih.gov/license.html">UMLS<sup>&reg;</sup> license</a></li>
- <li><a href="https://cwiki.apache.org/confluence/display/CTAKES/cTAKES+3.0+-+Dictionary+Lookup">
- Specification of license</a> with <code>ctakes.umlsuser</code> and <code>ctakes.umlspw</code>
- parameters or an appropriate descriptor file.
- </li>
- </ul>
- </li>
- <li><strong>Developers:</strong>
- <ul>
- <li><a href="https://subversion.apache.org/">Apache Subversion&trade; (SVN)</a> Client or equivalent
- <abbr title="Integrated Development Environment">IDE</abbr> plugin
- </li>
- <li><a href="https://maven.apache.org/">Apache Maven&trade;</a> or equivalent
- <abbr title="Integrated Development Environment">IDE</abbr> plugin
- </li>
- </ul>
- </li>
- </ul>
- </div>
- </div>
- <div class="row">
- <!-- Binary Download -->
- <div class="col-xs-12 col-sm-6">
- <div class="download-container">
- <h2 style="text-align: center;">User Installation</h2>
- <p>Zipped Installation with everything but the
- <abbr title="Unified Medical Language System">UMLS</abbr><sup>&reg;</sup> dictionary.<br>
- Please refer to the
- <a href="https://cwiki.apache.org/confluence/display/CTAKES/cTAKES+3.2+User+Install+Guide">
- User Install Guide</a> for assistance.</p>
- <a href="[preferred]/ctakes/ctakes-3.2.1/apache-ctakes-3.2.1-bin.zip"
- class="btn btn-download btn-primary btn-lg">Windows</a>
- <a href="[preferred]/ctakes/ctakes-3.2.1/apache-ctakes-3.2.1-bin.tar.gz"
- class="btn btn-download btn-primary btn-lg">Mac/Linux</a>
- </div>
- </div>
- <!-- Source Download -->
- <div class="col-xs-12 col-sm-6">
- <div class="download-container">
- <h2 style="text-align: center;">Source Code</h2>
- <p>Zipped Source code with everything but the
- <abbr title="Unified Medical Language System">UMLS</abbr><sup>&reg;</sup> dictionary.<br>
- Please refer to the
- <a href="https://cwiki.apache.org/confluence/display/CTAKES/cTAKES+3.2+Developer+Install+Guide">
- Developer Install Guide</a> for assistance.</p>
- <a href="[preferred]/ctakes/ctakes-3.2.1/apache-ctakes-3.2.1-src.zip"
- class="btn btn-download btn-primary btn-lg">Windows</a>
- <a href="[preferred]/ctakes/ctakes-3.2.1/apache-ctakes-3.2.1-src.tar.gz"
- class="btn btn-download btn-primary btn-lg">Mac/Linux</a>
- </div>
- </div>
- <!-- UMLS Download -->
- <div class="col-xs-12 col-sm-6">
- <div class="download-container">
- <h2 style="text-align: center;">UMLS<sup>&reg;</sup> Dictionary</h2>
- <p>Zipped copy of the cTAKES&trade;
- <abbr title="Unified Medical Language System">UMLS</abbr><sup>&reg;</sup> dictionary.
- Please refer to the
- <!-- TODO : Should write a separate page that outlines what the dictionaries are, licensing,
- and where/how to get them on the net, where to install them locally, and how to configure user/pass -->
- <a href="https://cwiki.apache.org/confluence/display/CTAKES/cTAKES+3.0+-+Dictionary+Lookup">
- Dictionary Install Guide</a> for assistance. Install fast version if only running ctakes-fast. </p>
- <a href="http://sourceforge.net/projects/ctakesresources/files/ctakes-resources-3.2.1.1-bin.zip/download"
- class="btn btn-download btn-primary btn-lg">All Versions</a>
- <!-- TODO : a 50MB download of the -fast dictionary should be an option; 610MB downloads are bad -->
- <!--<a href="http://sourceforge.net/projects/ctakesresources/files/ctakes-resources-3.2.1.1-bin.zip/download"-->
- <a href="#"
- class="btn btn-download btn-primary btn-lg">Fast Version</a>
- </div>
- </div>
- <!-- Developer SVN Help -->
- <div class="col-xs-12 col-sm-6">
- <div class="download-container">
- <h2 style="text-align: center;">Developer SVN</h2>
- <p>The latest version of source code, currently under development.<br>
- Please refer to the
- <a href="https://cwiki.apache.org/confluence/display/CTAKES/cTAKES+3.2+Developer+Install+Guide">
- Developer Install Guide</a> for assistance.</p>
- <pre><code>svn co https://svn.apache.org/repos/asf/ctakes/trunk/</code></pre>
- </div>
- </div>
- </div>
- <div class="col-xs-12 col-sm-12">
- <div class="row" id="mirror-container">
- <h4>Current Download Mirror:</h4>
- <ul>
- <li>If the current mirror <b>[preferred]</b> returns an error, select another:
- <form action="./downloads.cgi" method="get" id="SelectMirror">
- <select name="preferred">
- <option value="http://mirrors.sonic.net/apache/">http://mirrors.sonic.net/apache/</option>
- <option value="http://apache.mesi.com.ar/">http://apache.mesi.com.ar/</option>
- <option value="http://apache.claz.org/">http://apache.claz.org/</option>
- <option value="http://www.trieuvan.com/apache/">http://www.trieuvan.com/apache/</option>
- <option value="http://apache.tradebit.com/pub/">http://apache.tradebit.com/pub/</option>
- <option value="http://www.linuxtourist.com/apache/">http://www.linuxtourist.com/apache/</option>
- <option value="http://mirror.nexcess.net/apache/">http://mirror.nexcess.net/apache/</option>
- <option value="http://mirror.sdunix.com/apache/">http://mirror.sdunix.com/apache/</option>
- <option value="http://www.gtlib.gatech.edu/pub/apache/">http://www.gtlib.gatech.edu/pub/apache/
- </option>
- <option value="http://apache.mirrors.lucidnetworks.net/">http://apache.mirrors.lucidnetworks.net/
- </option>
- <option value="http://mirror.quintex.com/apache/">http://mirror.quintex.com/apache/</option>
- <option value="http://mirrors.ibiblio.org/apache/">http://mirrors.ibiblio.org/apache/</option>
- <option value="http://download.nextag.com/apache/">http://download.nextag.com/apache/</option>
- <option value="http://apache.cs.utah.edu/">http://apache.cs.utah.edu/</option>
- <option value="http://apache.osuosl.org/">http://apache.osuosl.org/</option>
- <option value="http://apache.mirrors.tds.net/">http://apache.mirrors.tds.net/</option>
- <option value="http://www.eng.lsu.edu/mirrors/apache/">http://www.eng.lsu.edu/mirrors/apache/
- </option>
- <option value="http://mirror.cogentco.com/pub/apache/">http://mirror.cogentco.com/pub/apache/
- </option>
- <option value="http://apache.petsads.us/">http://apache.petsads.us/</option>
- <option value="http://mirror.reverse.net/pub/apache/">http://mirror.reverse.net/pub/apache/
- </option>
- <option value="http://mirror.cc.columbia.edu/pub/software/apache/">
- http://mirror.cc.columbia.edu/pub/software/apache/
- </option>
- <option value="http://www.motorlogy.com/apache/">http://www.motorlogy.com/apache/</option>
- <option value="http://www.alliedquotes.com/mirrors/apache/">
- http://www.alliedquotes.com/mirrors/apache/
- </option>
- <option value="http://mirrors.gigenet.com/apache/">http://mirrors.gigenet.com/apache/</option>
- <option value="http://mirror.symnds.com/software/Apache/">
- http://mirror.symnds.com/software/Apache/
- </option>
- <option value="http://www.bizdirusa.com/mirrors/apache/">http://www.bizdirusa.com/mirrors/apache/
- </option>
- <option value="http://mirror.metrocast.net/apache/">http://mirror.metrocast.net/apache/</option>
- <option value="http://apache.spinellicreations.com/">http://apache.spinellicreations.com/</option>
- <option value="http://www.fightrice.com/mirrors/apache/">http://www.fightrice.com/mirrors/apache/
- </option>
- <option value="http://apache.mirrors.pair.com/">http://apache.mirrors.pair.com/</option>
- <option value="http://www.carfab.com/apachesoftware/">http://www.carfab.com/apachesoftware/
- </option>
- <option value="http://mirror.olnevhost.net/pub/apache/">http://mirror.olnevhost.net/pub/apache/
- </option>
- <option value="http://www.poolsaboveground.com/apache/">http://www.poolsaboveground.com/apache/
- </option>
- <option value="http://apache.mirrors.hoobly.com/">http://apache.mirrors.hoobly.com/</option>
- <option value="http://www.globalish.com/am/">http://www.globalish.com/am/</option>
- <option value="ftp://mirror.reverse.net/pub/apache/">ftp://mirror.reverse.net/pub/apache/</option>
- <option value="ftp://linux-files.com/apache/">ftp://linux-files.com/apache/</option>
- <option value="ftp://apache.mirrors.tds.net/pub/apache.org/">
- ftp://apache.mirrors.tds.net/pub/apache.org/
- </option>
- <option value="ftp://ftp.osuosl.org/pub/apache/">ftp://ftp.osuosl.org/pub/apache/</option>
- <option value="ftp://apache.cs.utah.edu/apache.org/">ftp://apache.cs.utah.edu/apache.org/</option>
- <option value="ftp://apache.mirrors.pair.com/">ftp://apache.mirrors.pair.com/</option>
- <option value="http://www.eu.apache.org/dist/">http://www.eu.apache.org/dist/ (backup)</option>
- <option value="http://www.us.apache.org/dist/">http://www.us.apache.org/dist/ (backup)</option>
- </select>
- <input type="submit" value="Change"/>
- You may also consult the <a href="http://www.apache.org/mirrors/">complete list of mirrors</a>.
- </form>
- </li>
- </ul>
- </div>
- </div>
-</div>
+
<!--- END MAIN CONTENT -->
<footer class="small">
Modified: websites/staging/ctakes/trunk/content/examples.html
==============================================================================
--- websites/staging/ctakes/trunk/content/examples.html (original)
+++ websites/staging/ctakes/trunk/content/examples.html Thu Mar 5 22:26:23 2015
@@ -127,163 +127,7 @@
</nav>
<!--- BEGIN MAIN CONTENT -->
- <div class="container">
- <div class="row">
- <h1>Examples</h1>
- <p>Select a thumbnail above to view a larger image. Click larger image to open a page with additional information.</p>
- </div>
- <div class="row boing-tile-bar">
- <div class="col-xs-3 col-md-2">
- <div class="boing-tile">
- <img id="cvd-button" class="boing-button" src="images/CvdThumb.jpg">
- <div class="boing-title">
- <h4>UIMA&trade; CVD</h4>
- </div>
- </div>
- </div>
- <div class="col-xs-3 col-md-2">
- <div class="boing-tile">
- <img id="cpe-button" class="boing-button" src="images/CPEthumb.jpg">
- <div class="boing-title">
- <h4>UIMA&trade; CPE</h4>
- </div>
- </div>
- </div>
- <div class="col-xs-3 col-md-2">
- <div class="boing-tile">
- <img id="webui-button" class="boing-button" src="images/ctakesguiThumb.jpg">
- <div class="boing-title">
- <h4>cTAKES&trade; GUI</h4>
- </div>
- </div>
- </div>
- <div class="col-xs-3 col-md-2">
- <div class="boing-tile">
- <img id="timelanes-button" class="boing-button" src="images/TimeLanesThumb.jpg">
- <div class="boing-title">
- <h4>TimeLanes</h4>
- </div>
- </div>
- </div>
- <!-- INFO and TITLE PANEL -->
- <div class="col-md-4 col-xs-12">
- <div id="cvd-info" class="boing-info">
- <h4>Apache <abbr title="Unstructured Information Management applications">UIMA&trade;</abbr>
- Cas Visual Debugger (CVD)<br>
- <small>Process raw text and view <abbr title="Natural Language Processing">NLP</abbr> metadata</small>
- </h4>
- </div>
- <div id="cpe-info" class="boing-info">
- <h4>Apache <abbr title="Unstructured Information Management applications">UIMA&trade;</abbr>
- Collection Processing Engine configurator (CPE)<br>
- <small>Process a multiple document batch</small>
- </h4>
- </div>
- <div id="webui-info" class="boing-info">
- <h4>cTAKES <abbr title="Graphical User Interface">GUI</abbr><br>
- <small>Process raw text in a web browser</small>
- </h4>
- </div>
- <div id="timelanes-info" class="boing-info">
- <h4>TimeLanes<br>
- <small>View extracted UMLS and Temporal information</small>
- </h4>
- </div>
- </div>
- </div>
- <div class="row boing-main-image">
- <div class="col-xs-12">
- <div id="boing-cvd" class="boing">
- <a href="https://uima.apache.org/downloads/releaseDocs/2.2.2-incubating/docs/html/tools/tools.html#cvd.mainDisplayArea">
- <img class="boing-image" src="images/CvdMain1.jpg">
- </a>
- </div>
- <div id="boing-cpe" class="boing">
- <a href="http://uima.apache.org/downloads/releaseDocs/2.3.0-incubating/docs/html/tutorials_and_users_guides/tutorials_and_users_guides.html#ugr.tug.cpe.configurator_and_viewer">
- <img class="boing-image" src="images/CPEimage006.jpg">
- </a>
- </div>
- <div id="boing-webui" class="boing">
- <a href="https://community.i2b2.org/wiki/display/NLPCTAKES/Home">
- <img class="boing-image" src="images/ctakesguiJoin.jpg">
- </a>
- </div>
- <div id="boing-timelanes" class="boing">
- <a href="#">
- <img class="boing-image" src="images/TimeLanesBig.jpg">
- </a>
- </div>
- </div>
- </div>
-</div>
-
-<!-- show enlarged image -->
-{% block script %}
-<script type="text/javascript">
-var boingCvd = $( "#boing-cvd" );
-var boingCpe = $( "#boing-cpe" );
-var boingWebui = $( "#boing-webui" );
-var boingTimeLanes = $( "#boing-timelanes" );
-var infoCvd = $( "#cvd-info" );
-var infoCpe = $( "#cpe-info" );
-var infoWebui = $( "#webui-info" );
-var infoTimeLanes = $( "#timelanes-info" );
-var boingSpeed = 500;
-
-infoCvd.show();
-boingCvd.show();
-
-$('#cvd-button').mouseover(function() {
- infoCpe.hide();
- infoWebui.hide();
- infoTimeLanes.hide();
- infoCvd.show();
-});
-$('#cpe-button').mouseover(function() {
- infoCvd.hide();
- infoWebui.hide();
- infoTimeLanes.hide();
- infoCpe.show();
-});
-$('#webui-button').mouseover(function() {
- infoCvd.hide();
- infoCpe.hide();
- infoTimeLanes.hide();
- infoWebui.show();
-});
-$('#timelanes-button').mouseover(function() {
- infoCvd.hide();
- infoCpe.hide();
- infoWebui.hide();
- infoTimeLanes.show();
-});
-
-$( "#cvd-button" ).on( "click", function( event ) {
- boingCpe.hide( boingSpeed );
- boingWebui.hide( boingSpeed );
- boingTimeLanes.hide( boingSpeed );
- boingCvd.show( boingSpeed );
-});
-$( "#cpe-button" ).on( "click", function( event ) {
- boingCvd.hide( boingSpeed );
- boingWebui.hide( boingSpeed );
- boingTimeLanes.hide( boingSpeed );
- boingCpe.show( boingSpeed );
-});
-$( "#webui-button" ).on( "click", function( event ) {
- boingCvd.hide( boingSpeed );
- boingCpe.hide( boingSpeed );
- boingTimeLanes.hide( boingSpeed );
- boingWebui.show( boingSpeed );
-});
-$( "#timelanes-button" ).on( "click", function( event ) {
- boingCvd.hide( boingSpeed );
- boingCpe.hide( boingSpeed );
- boingWebui.hide( boingSpeed );
- boingTimeLanes.show( boingSpeed );
-});
-</script>
-{% endblock %}
+
<!--- END MAIN CONTENT -->
<footer class="small">
Modified: websites/staging/ctakes/trunk/content/faq.html
==============================================================================
--- websites/staging/ctakes/trunk/content/faq.html (original)
+++ websites/staging/ctakes/trunk/content/faq.html Thu Mar 5 22:26:23 2015
@@ -127,51 +127,7 @@
</nav>
<!--- BEGIN MAIN CONTENT -->
- <div class="container main-container">
- <h1> Frequently Asked Questions </h1>
-
- <div class="panel-group" id="accordion">
- <div class="panel panel-default">
- <div class="panel-heading">
- <h4 class="panel-title">
- <a data-toggle="collapse" data-parent="#accordion" href="#collapseOne">What is cTAKES? </a>
- </h4>
- </div>
- <div id="collapseOne" class="panel-collapse collapse ">
- <div class="panel-body"> cTAKES ....</div>
- </div>
- </div>
-
- <div class="panel panel-default">
- <div class="panel-heading">
- <h4 class="panel-title">
- <a data-toggle="collapse" data-parent="#accordion" href="#collapseTwo"> How do I use cTAKES? </a>
- </h4>
- </div>
- <div id="collapseTwo" class="panel-collapse collapse">
- <div class="panel-body"> cTAKES</div>
- </div>
- </div>
-
- <div class="panel panel-default">
- <div class="panel-heading">
- <h4 class="panel-title">
- <a data-toggle="collapse" data-parent="#accordion" href="#collapseThree"> How do I get additional
- help?</a>
- </h4>
- </div>
- <div id="collapseThree" class="panel-collapse collapse">
- <div class="panel-body"> You can search through the mail archives, JIRA issues, or email dev at
- ctakes.apache.org with a description of your issue.
- </div>
- </div>
- </div>
- </div>
-</div>
-<script src="js/lang-tabs.js"></script>
-<script src="js/main.js"></script>
-
-
+
<!--- END MAIN CONTENT -->
<footer class="small">
Modified: websites/staging/ctakes/trunk/content/history.html
==============================================================================
--- websites/staging/ctakes/trunk/content/history.html (original)
+++ websites/staging/ctakes/trunk/content/history.html Thu Mar 5 22:26:23 2015
@@ -127,34 +127,7 @@
</nav>
<!--- BEGIN MAIN CONTENT -->
- <div class="container main">
- <div class="row">
- <h1> History </h1>
-
- <p>
- The development of cTAKES started in 2006 by a team of physicians, computer scientists and software engineers
- at the Mayo Clinic. The development team was led by Dr. Guergana Savova & Dr. Christopher Chute. cTAKES is
- released open source under an Apache v2.0 license. This system was deployed at Mayo and is currently an
- integral part of their clinical data management infrastructure and has processed in excess of 80 million
- clinical notes.
- </p>
-
- <p>
- Following Dr. Savova's move to Children's Hospital Boston in early 2010, the core development team expanded to
- include Mayo Clinic and Children's Hospital Boston. Additional collaborations with external groups at
- University of Colorado, Brandeis University, University of Pittsburgh, University of California at San Diego
- continue to extend the capabilities of cTAKES into areas such Temporal Reasoning, Clinical Question and
- Answering, and coreference resolution for the clinical domain. In 2010, cTAKES was adopted by the I2B2 program
- and is a central component of the SHARP Area 4.
- </p>
-
- <p>
- On June 11, 2012, cTAKES entered the Apache Incubator. On March 20, 2013, cTAKES graduated into an Apache TLP.
- </p>
- </div>
-</div>
-
-
+
<!--- END MAIN CONTENT -->
<footer class="small">
Modified: websites/staging/ctakes/trunk/content/index.html
==============================================================================
--- websites/staging/ctakes/trunk/content/index.html (original)
+++ websites/staging/ctakes/trunk/content/index.html Thu Mar 5 22:26:23 2015
@@ -127,75 +127,7 @@
</nav>
<!--- BEGIN MAIN CONTENT -->
- <div class="col-md-12 jumbotron">
- <div class="container">
- <h1>Apache cTAKES&trade;</h1>
- <p>Apache cTAKES&trade; is a natural language processing system for extraction of information
- from electronic medical record clinical free-text.</p>
- <a href="downloads.cgi" class="btn btn-primary btn-lg">
- <span class="fa fa-download" aria-hidden="true"> </span> Download
- </a>
- <a href="examples.html" class="btn btn-info btn-lg">
- <span class="fa fa-book" aria-hidden="true"> </span> Examples
- </a>
- </div>
-</div>
-<!-- end row with center panel and right navigator -->
-<div class="container main">
- <!-- ROW-->
- <div class="row">
- <div class="col-sm-6 col-md-4 description-container">
- <h2>Powerful</h2>
- <span class="fa-stack fa-3x">
- <span class="fa fa-bolt fa-stack-1x mid-icon"></span>
- <span class="fa fa-circle-thin fa-stack-2x fa-inverse"></span>
- </span>
- <p>Discover codable entities, temporal events, properties and relations.</p>
- </div>
- <div class="col-sm-6 col-md-4 description-container">
- <h2>Fast</h2>
- <span class="fa-stack fa-3x">
- <span class="fa fa-clock-o fa-stack-1x mid-icon"></span>
- <span class="fa fa-circle-thin fa-stack-2x"></span>
- </span>
- <p>Process database or file-stored batches at 50,000 clinical notes per hour.</p>
- </div>
- <div class="col-sm-6 col-md-4 description-container">
- <h2>Scalable</h2>
- <span class="fa-stack fa-3x">
- <span class="fa fa-arrow-up fa-stack-1x mid-icon"></span>
- <span class="fa fa-circle-thin fa-stack-2x"></span>
- </span>
- <p>Scale up to run on clusters, queue systems and cloud computing services.</p>
- </div>
- <div class="col-sm-6 col-md-4 description-container">
- <h2>Modular</h2>
- <span class="fa-stack fa-3x">
- <span class="fa fa-gear fa-stack-1x mid-icon"></span>
- <span class="fa fa-circle-thin fa-stack-2x"></span>
- </span>
- <p>Fully customize pipelines to use any Apache UIMA compatible component. </p>
- </div>
- <div class="col-sm-6 col-md-4 description-container">
- <h2>Portable</h2>
- <span class="fa-stack fa-3x">
- <span class="fa fa-check fa-stack-1x mid-icon"></span>
- <span class="fa fa-circle-thin fa-stack-2x"></span>
- </span>
- <p>Run in Java on any major platform.</p>
- </div>
- <div class="col-sm-6 col-md-4 description-container">
- <h2>Free</h2>
- <span class="fa-stack fa-3x">
- <span class="fa fa-dollar fa-stack-1x mid-icon"></span>
- <span class="fa fa-ban fa-stack-2x"></span>
- </span>
- <p>Download the latest 100% free and open source release. </p>
- </div>
- </div>
- <!-- end row -->
-</div>
-<!-- end main div -->
+
<!--- END MAIN CONTENT -->
<footer class="small">
Modified: websites/staging/ctakes/trunk/content/mailing.html
==============================================================================
--- websites/staging/ctakes/trunk/content/mailing.html (original)
+++ websites/staging/ctakes/trunk/content/mailing.html Thu Mar 5 22:26:23 2015
@@ -127,106 +127,7 @@
</nav>
<!--- BEGIN MAIN CONTENT -->
- <div class="container main">
- <h1> Mailing Lists </h1>
- <p> We welcome you to join our mailing lists and let us know about your thoughts or ideas about Apache cTAKES. In
- general, you can email dev at ctakes.apache.org for questions after subscribing.</p>
- <!-- ROW-->
- <div class="row">
- <div class="col-md-12">
- <h2>Subscriptions</h2>
- <p> To subscribe to a particular list, send a plain-text (not html format) email to the appropriate
- *-subscribe@ctakes.apache.org email addresses below and follow the instructions in automated email
- responses. </p>
- <table class="table table-striped table-condensed" width="100%">
- <col style="width:20%">
- <col style="width:20%">
- <col style="width:20%">
- <col style="width:40%">
- <tr>
- <th>Name of Mailing List</th>
- <th>Subscribe</th>
- <th>Unsubscribe</th>
- <th>Description</th>
- </tr>
- <tr>
- <td>Users</td>
- <td><a href="mailto:user-subscribe@ctakes.apache.org?subject=subscribe&amp;body=subscribe">user-subscribe@ctakes.apache.org</a>
- </td>
- <td><a href="mailto:user-unsubscribe@ctakes.apache.org?subject=unsubscribe&amp;body=unsubscribe">user-unsubscribe@ctakes.apache.org</a>
- </td>
- <td>This is where the users ask questions, suggest features, etc. This is a low traffic list.</td>
- </tr>
- <tr>
- <td>Developers</td>
- <td><a href="mailto:dev-subscribe@ctakes.apache.org?subject=subscribe&amp;body=subscribe">dev-subscribe@ctakes.apache.org</a>
- </td>
- <td><a href="mailto:dev-unsubscribe@ctakes.apache.org?subject=unsubscribe&amp;body=unsubscribe">dev-unsubscribe@ctakes.apache.org</a>
- </td>
- <td>This is where the community hangs out. This list is used to coordinate activities and ensure we are
- all pulling in the same direction. This is a high traffic list, with an average of 57 posts/day.
- </td>
- </tr>
- <tr>
- <td>Commits Notifications</td>
- <td><a
- href="mailto:notifications-subscribe@ctakes.apache.org">notifications-subscribe@ctakes.apache.org</a>
- </td>
- <td><a href="mailto:notifications-unsubscribe@ctakes.apache.org">notifications-unsubscribe@ctakes.apache.org</a>
- </td>
- <td>This is where the community receives automated notifications from JIRA and Jenkins(Continuous
- Integration). This is a moderate traffic list, with an average of 5 posts/day.
- </td>
- </tr>
- <tr>
- <td>Commits Mailing List</td>
- <td><a href="mailto:commits-subscribe@ctakes.apache.org">commits-subscribe@ctakes.apache.org</a>
- </td>
- <td><a href="mailto:commmits-unsubscribe@ctakes.apache.org">commmits-unsubscribe@ctakes.apache.org</a>
- </td>
- <td>This is where the community receives automated notifications of any changes to the cTAKES code and
- documentation. This is a moderate traffic list, with an average of 10 posts/day.
- </td>
- </tr>
- </table>
- </div>
- </div>
- <!-- end row -->
- <div class="row">
- <div class="col-md-12">
- <h2> Archives </h2>
- <p> To browse the archives of the mailing lists, you can click one of the links below. </p>
- <table class="table table-striped table-condensed">
- <tr>
- <th>Name</th>
- <th>Apache archive</th>
- </tr>
- <tr>
- <td>Users</td>
- <td><a href="http://mail-archives.apache.org/mod_mbox/ctakes-user/">Archive</a>
- </td>
- </tr>
- <tr>
- <td>Developers</td>
- <td><a href="http://mail-archives.apache.org/mod_mbox/ctakes-dev/">Archive</a>
- </td>
- </tr>
- <tr>
- <td>Commit Notifications</td>
- <td><a href="http://mail-archives.apache.org/mod_mbox/ctakes-notifications/">Archive</a>
- </td>
- </tr>
- <tr>
- <td>Commits Mailing List</td>
- <td><a href="http://mail-archives.apache.org/mod_mbox/ctakes-commits/">Archive</a>
- </td>
- </tr>
- </table>
- </div>
- </div>
-</div>
-
-
+
<!--- END MAIN CONTENT -->
<footer class="small">
Modified: websites/staging/ctakes/trunk/content/people.html
==============================================================================
--- websites/staging/ctakes/trunk/content/people.html (original)
+++ websites/staging/ctakes/trunk/content/people.html Thu Mar 5 22:26:23 2015
@@ -127,52 +127,7 @@
</nav>
<!--- BEGIN MAIN CONTENT -->
- <div class="container main">
- <h2> List of Volunteers </h2>
-
- <p> Apache cTAKES is a community developed project. The list below is a partial list of contributors to the project,
- for a complete list you'd have to look at all contributors to our issue tracker, mailing list and version
- control. </p>
-
- <h3> Project Management Committee Members </h3>
- <ul>
-
- <li> Hongfang Liu (liuhongfang at apache.org)</li>
- <li> Vinod Kaggal (vkaggal at apache.org)</li>
- <li> Troy Bleeker (bleeker at apache.org)</li>
- <li> Dmitriy Dligach (dligach at apache.org)</li>
- <li> Tim Miller (tmill at apache.org)</li>
- <li> Steven Bethard (stevenbethard at apache.org)</li>
- <li> Matt Coarr (mattcoarr at apache.org)</li>
- <li> Jorn Kottmann (joern at apache.org)</li>
- <li> Chris Mattmann (mattmann at apache.org)</li>
- <li> Grant Ingersoll (gsingers at apache.org)</li>
- <li> Sean Finan (seanfinan at apache.org)</li>
- <li> Guergana K. (gsavova at apache.org)</li>
- <li> James Masanz (james-masanz at apache.org)</li>
- <li> Pei Chen (chenpei at apache.org)</li>
- <li> Sunghwan Sohn (ssohn at apache.org)</li>
- <li> Steven Bethard (stevenbethard at apache.org)</li>
- <li> Stephen Wu (swu at apache.org)</li>
- <li> Siddhartha Jonnalagadda (siddhartha at apache.org)</li>
- <li> Sean Patrick (spmurphy50 at apache.org)</li>
- <li> Karthik Sarma (ksarma at apache.org)</li>
- <li> Kim Ebert (kebert at apache.org)</li>
- <li> Ding Cheng (leonleeldc at apache.org)</li>
- <li> Britt Fitch (brittfitch at apache.org)</li>
- <li> Andy McMurry (andymc at apache.org)</li>
- <li> Michelle Chen (michelle at apache.org)</li>
- <li> Jiaping Zheng</li>
- <li> Jinho Choi</li>
- <li> Scott Halgrim</li>
- <li> Ira Goldstein</li>
- <li> Jeff Ferraro</li>
- <li> Lee Becker</li>
-
- </ul>
-</div>
-
-
+
<!--- END MAIN CONTENT -->
<footer class="small">
Modified: websites/staging/ctakes/trunk/content/sitemap.html
==============================================================================
--- websites/staging/ctakes/trunk/content/sitemap.html (original)
+++ websites/staging/ctakes/trunk/content/sitemap.html Thu Mar 5 22:26:23 2015
@@ -127,9 +127,7 @@
</nav>
<!--- BEGIN MAIN CONTENT -->
- {% include "single_narrative.html" %}
-
-
+
<!--- END MAIN CONTENT -->
<footer class="small">
Modified: websites/staging/ctakes/trunk/content/sponsors.html
==============================================================================
--- websites/staging/ctakes/trunk/content/sponsors.html (original)
+++ websites/staging/ctakes/trunk/content/sponsors.html Thu Mar 5 22:26:23 2015
@@ -127,36 +127,7 @@
</nav>
<!--- BEGIN MAIN CONTENT -->
- <div class="container main">
- <div class="row">
- <h1> Sponsors </h1>
-
- <h2> Partners of cTAKES </h2>
- <picture>
- <!--[if IE 9]>
- <video style="display: none;"></video><![endif]-->
- <source srcset="images/partners.jpg" media="(max-width: 768px)">
- <source srcset="images/partners-larger.jpg">
- <!--[if IE 9]></video><![endif]-->
- <img srcset="images/partners.jpg" alt="Image of partners: OpenNLP, UIMA, Spark, BigTop, Hadoop">
- </picture>
-
- <h2> Official Apache Sponsors </h2>
-
- <p> List of Apache Software Foundation
- <a href="http://www.apache.org/foundation/thanks.html" alt="Link to Apache Software Foundation Sponsors">
- Sponsors </a>
- </p>
-
- <h2> Become a Sponsor </h2>
-
- <p>
- <a href="http://www.apache.org/foundation/thanks.html"
- alt="Link to Apache Software Foundation Sponsorship Program"> Sponsorship Form </a>
- </p>
- </div>
-</div>
-
+
<!--- END MAIN CONTENT -->
<footer class="small">
Modified: websites/staging/ctakes/trunk/content/template.html
==============================================================================
--- websites/staging/ctakes/trunk/content/template.html (original)
+++ websites/staging/ctakes/trunk/content/template.html Thu Mar 5 22:26:23 2015
@@ -127,136 +127,7 @@
</nav>
<!--- BEGIN MAIN CONTENT -->
- <!-- Use this page as a template guide for making new pages on the site.
- Main edits can be made to line 23, 55, 103 -->
-
-<!DOCTYPE html>
-<html lang="en">
-<head>
- <meta charset="utf-8">
- <meta http-equiv="X-UA-Compatible" content="IE=edge">
- <meta name="viewport" content="width=device-width, initial-scale=1.0">
-
- <title>
- Apache cTAKES&trade; - clinical Text Analysis Knowledge Extraction System
- </title>
- <link rel="icon" type="image/png" href="images/apache_logo.png"/>
-
-
- <!-- Bootstrap core CSS -->
- <link href="css/cerulean.min.css" rel="stylesheet">
- <link href="css/custom.css" rel="stylesheet">
-
- <link href='http://fonts.googleapis.com/css?family=Open+Sans' rel='stylesheet' type='text/css'>
- <link href="css/main.css" rel="stylesheet">
- <link href="css/apache.css" rel="stylesheet">
- <!-- TODO: Add any additional css that might be necessary -->
-
- <script type="text/javascript">
- var _gaq = _gaq || []; _gaq.push(['_setAccount', 'UA-41673085-1']); _gaq.push(['_trackPageview']); (function() { var ga = document.createElement('script'); ga.type = 'text/javascript'; ga.async = true; ga.src = ('https:' == document.location.protocol ? 'https://ssl' : 'http://www') + '.google-analytics.com/ga.js'; var s = document.getElementsByTagName('script')[0]; s.parentNode.insertBefore(ga, s); })();
-
-
- </script>
-
- <!-- HTML5 shim and Respond.js IE8 support of HTML5 elements and media queries -->
- <!--[if lt IE 9]>
- <script src="https://oss.maxcdn.com/libs/html5shiv/3.7.0/html5shiv.js"></script>
- <script src="https://oss.maxcdn.com/libs/respond.js/1.3.0/respond.min.js"></script>
- <![endif]-->
-</head>
-
-<body>
-<nav class="navbar navbar-default navbar-fixed-top" role="navigation">
- <div class="navbar-inner">
- <div class="container" id="navbar-container">
- <!-- Brand and toggle get grouped for better mobile display -->
- <div class="navbar-header">
- <button type="button" class="navbar-toggle" data-toggle="collapse" data-target=".navbar-collapse">
- <span class="sr-only">Toggle Navigation</span>
- <span class="icon-bar"></span>
- <span class="icon-bar"></span>
- <span class="icon-bar"></span>
- </button>
- <a class="navbar-brand" href="index.html"> <img src="images/ctakes_logo.png"/>
- </a>
- </div>
-
-
- <!-- Collect the nav links, forms, and other content for toggling -->
- <div class="collapse navbar-collapse" id="navbar-collapse-1">
- <!-- TODO: Be sure to add the appropriate link to the page. -->
- <ul class="nav navbar-nav navbar-right">
- <li class="dropdown">
- <a href="whycTAKES.html">Why cTAKES?</a>
- </li>
- <li class="dropdown">
- <a href="#" class="dropdown-toggle" data-toggle="dropdown">
- Get Started <b class="caret"></b>
- </a>
- <ul class="dropdown-menu">
- <li><a href="downloads.cgi">Download cTAKES</a></li>
- <li><a href="examples.html">Examples</a></li>
- <li><a href="tutorials.html">Tutorials</a></li>
-
- </ul>
- </li>
-
- <li class="dropdown">
- <a href="#" class="dropdown-toggle" data-toggle="dropdown">
- Community <b class="caret"></b>
- </a>
- <ul class="dropdown-menu">
- <li><a href="community.html">Get Involved</a></li>
- <li><a href="history.html">Project History</a></li>
- <li><a href="usedby.html">Who's Using cTAKES</a></li>
- <li><a href="people.html">People</a></li>
- <li><a href="https://www.apache.org/security">Security</a></li>
- <li><a href="https://www.apache.org/licenses/">License</a></li>
- <li><a href="https://issues.apache.org/jira/browse/ctakes">Issue Tracker</a></li>
- </ul>
- </li>
- <li class="dropdown">
- <a href="#" class="dropdown-toggle" data-toggle="dropdown">Resources
- <b class="caret"></b>
- </a>
- <ul class="dropdown-menu">
- <li><a href="faq.html">FAQ</a></li>
- <li><a href="mailing.html">Mailing Lists</a></li>
- <li><a href="https://www.apache.org/foundation/sponsorship.html">Sponsorship</a></li>
- <li><a href="https://www.apache.org/foundation/thanks.html">Thanks</a></li>
- </ul>
- </li>
-
- </ul>
- </div>
- <!-- /.navbar-collapse -->
- </div>
- <!-- End container -->
- </div>
-</nav>
-
-<div class="container">
- <div class="row">
- <h1> Title of the page </h1>
-
- <p> [modify the text here].</p>
- </div>
-
-</div>
-
-<footer class="small">
- <hr>
- Apache cTAKES, cTAKES, Apache, and the cTAKES logo are trademarks of
- <a href="http://www.apache.org">The Apache Software Foundation</a>.
- <a href="http://www.apache.org"><img class="little-feather" src="images/feather_20v.png"></a>
-</footer>
-<script src="https://code.jquery.com/jquery.js"></script>
-<script src="https://netdna.bootstrapcdn.com/bootstrap/3.0.3/js/bootstrap.min.js"></script>
-
-
-</body>
-</html>
-
+
<!--- END MAIN CONTENT -->
<footer class="small">
Modified: websites/staging/ctakes/trunk/content/tutorials.html
==============================================================================
--- websites/staging/ctakes/trunk/content/tutorials.html (original)
+++ websites/staging/ctakes/trunk/content/tutorials.html Thu Mar 5 22:26:23 2015
@@ -127,45 +127,7 @@
</nav>
<!--- BEGIN MAIN CONTENT -->
- <div class="container">
- <div class="row">
- <h1> Tutorials</h1>
- <p> Some ideas for getting started include:
- <ul>
- <li> Refer to the User/Developer Installation Guide for useful documentation</li>
- <li> ClinicalPipelineFactory in ctakes-clinical-pipeline</li>
- </ul>
- </p>
- </div>
- <!-- row with video and text -->
- <div class="row">
- <div class="col-md-6">
- <p>
- Here is a tutorial video given by Dr. Guergana Savova explaining the overview of cTAKES.
- </p>
- </div>
- <div class="col-md-6 videoWrapper">
- <iframe src="http://player.vimeo.com/video/24829353?title=0&amp;byline=0&amp;portrait=0" width="500"
- height="250" frameborder="0" webkitallowfullscreen mozallowfullscreen allowfullscreen></iframe>
- <p><a href="http://vimeo.com/24829353">Natural Language Processing and Information Extraction for
- Biomedicine</a> from <a href="http://vimeo.com/cbmi">CBMI</a> on <a href="https://vimeo.com">Vimeo</a>.</p>
- </div>
- </div>
- <hr>
- <!-- row with video and text -->
- <div class="row">
- <div class="col-md-6">
- <p>
- Here is another introductory video highlighting the features of cTAKES as explained by Sean Finan from
- Boston Children's Hospital.
- </p>
- </div>
- <div class="col-md-6 videoWrapper">
- <iframe width="420" height="315" src="https://www.youtube.com/embed/TpGZIKEDYMw" frameborder="0"
- allowfullscreen></iframe>
- </div>
- </div>
-</div>
+
<!--- END MAIN CONTENT -->
<footer class="small">
Modified: websites/staging/ctakes/trunk/content/usedby.html
==============================================================================
--- websites/staging/ctakes/trunk/content/usedby.html (original)
+++ websites/staging/ctakes/trunk/content/usedby.html Thu Mar 5 22:26:23 2015
@@ -127,47 +127,7 @@
</nav>
<!--- BEGIN MAIN CONTENT -->
- <div class="container">
- <div class="row">
- <h1> Who's using cTAKES? </h1>
- <p> There are a variety of different organizations using and working on cTAKES. [modify the text here].</p>
- </div>
- <div class="row">
- <h2>Academic</h2>
- <p class="lead">
- Hospitals and Academic Institutions
- </p>
- <p> Insert images for the different institutions </p>
- <p>Boston Children's Hospital</p>
- <p>Cincinnati Childrenâs Hospital</p>
- <p>Mayo Clinic</p>
- <p>University of Colorado Boulder</p>
- <p>University of Pittsburgh</p>
- <p>University of California, San Diego</p>
- </div>
- <div class="row">
- <h2>Software Projects</h2>
- </div>
- <div class="row">
- <h2>Companies</h2>
- <p><a href="http://wwww.wiredinformatics.com">Wired Informatics</a></p>
- </div>
- <div class="row">
- <h2>Publications</h2>
- <p>Insert list of publications</p>
- </div>
- <div class="row">
- <div class="col-md-5 col-sm-5 col-padded-top col-center">
- <div style="width: 100%; max-width: 272px; display: inline-block; text-align: center;">
- <img src="images/pb-ctakes.jpg" style="margin-top: 15px; width: 100%; max-width: 200px;"/>
- <div class="caption" style="min-width: 272px;">Click <a href="mailto:dev@ctakes.apache.org"> here</a> to add
- your name/organization.
- </div>
- </div>
- </div>
- </div>
-</div>
-</div>
+
<!--- END MAIN CONTENT -->
<footer class="small">
Modified: websites/staging/ctakes/trunk/content/whycTAKES.html
==============================================================================
--- websites/staging/ctakes/trunk/content/whycTAKES.html (original)
+++ websites/staging/ctakes/trunk/content/whycTAKES.html Thu Mar 5 22:26:23 2015
@@ -127,22 +127,7 @@
</nav>
<!--- BEGIN MAIN CONTENT -->
- <div class="container main">
- <h2>Why cTAKES? <small>See the animation below for a sampling of cTAKES capabilities</small></h2>
- <!-- Example Text and markup -->
- <div class="container-fluid">
- <div class="row" style="position: relative;">
- <img class="img-responsive" src="images/MarkedText.png">
- <img id="neg-uncertain" class="markuper img-responsive" src="images/NegAndUncertain2.png"
- style="position: absolute; top: 19.3%">
- <img id="coreference" class="markuper img-responsive" src="images/Coreference2.png"
- style="position: absolute; top: 62%">
- <img id="locationof" class="markuper img-responsive" src="images/LocationOf2.png"
- style="position: absolute; top: 50.7%">
- <img id="tlink" class="markuper img-responsive" src="images/Tlink2.png" style="position: absolute; top: 70.5%">
- </div>
- </div>
-</div>
+
<!--- END MAIN CONTENT -->
<footer class="small">