[jira] [Commented] (CTAKES-503) DBConsumer does not handle bodyLocation attributes

["Sean Mullane (JIRA)" <ji...@apache.org>]

    [ https://issues.apache.org/jira/browse/CTAKES-503?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16428803#comment-16428803 ] 

Sean Mullane commented on CTAKES-503:
-------------------------------------

I attached an SVN patch to fix this issue for bodyLocation attributes.

> DBConsumer does not handle bodyLocation attributes
> --------------------------------------------------
>
>                 Key: CTAKES-503
>                 URL: https://issues.apache.org/jira/browse/CTAKES-503
>             Project: cTAKES
>          Issue Type: Bug
>          Components: ctakes-ytex-uima
>    Affects Versions: 4.0.0
>         Environment: All
>            Reporter: Sean Mullane
>            Priority: Major
>              Labels: dbconsumer, ytex
>             Fix For: 4.0.1
>
>         Attachments: bodyLocation.diff
>
>
> Currently the DBConsumer annotator does not write attributes based on relations to database tables unless they are contained in an FSArray. Therefore the _bodyLocation_ and _severity_ attributes, and possibly others, are ignored when a document and its annotations are written to a database.
> More generally, relations are not parsed and written to the database by the DBConsumer because they are not descended from uima.tcas.annotation and are therefore not contained in the AnnotationIndex, which is the only index the DBConsumer parses.



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