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Posted to hdfs-issues@hadoop.apache.org by "Wei-Chiu Chuang (JIRA)" <ji...@apache.org> on 2017/02/10 21:37:41 UTC
[jira] [Commented] (HDFS-10927) Lease Recovery: File not getting
closed on HDFS when block write operation fails
[ https://issues.apache.org/jira/browse/HDFS-10927?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15861877#comment-15861877 ]
Wei-Chiu Chuang commented on HDFS-10927:
----------------------------------------
Hi [~ngoswami] thanks for reporting this issue and attach the relevant logs.
We have seen the same error message a few times in the past:
{quote}
java.io.IOException: THIS IS NOT SUPPOSED TO HAPPEN: getBytesOnDisk() < getVisibleLength(),
{quote}
In one such incidence, the DataNode had a long GC pause, lasting more than 1 minute. I have a theory why this inconsistency happens and I am working on a unit test to reproduce it. Could you confirm if the DataNode in your cluster also suffered from a long GC?
> Lease Recovery: File not getting closed on HDFS when block write operation fails
> --------------------------------------------------------------------------------
>
> Key: HDFS-10927
> URL: https://issues.apache.org/jira/browse/HDFS-10927
> Project: Hadoop HDFS
> Issue Type: Bug
> Components: fs
> Affects Versions: 2.7.1
> Reporter: Nitin Goswami
>
> HDFS was unable to close a file when block write operation failed because of too high disk usage.
> Scenario:
> HBase was writing WAL logs on HDFS and the disk usage was too high at that time. While writing these WAL logs, one of the blocks writes operation failed with the following exception:
> 2016-09-13 10:00:49,978 INFO org.apache.hadoop.hdfs.server.datanode.DataNode: Exception for BP-337226066-192.168.193.217-1468912147102:blk_1074859607_1160899
> java.net.SocketTimeoutException: 60000 millis timeout while waiting for channel to be ready for read. ch : java.nio.channels.SocketChannel[connected local=/192.168.194.144:50010 remote=/192.168.192.162:43105]
> at org.apache.hadoop.net.SocketIOWithTimeout.doIO(SocketIOWithTimeout.java:164)
> at org.apache.hadoop.net.SocketInputStream.read(SocketInputStream.java:161)
> at org.apache.hadoop.net.SocketInputStream.read(SocketInputStream.java:131)
> at java.io.BufferedInputStream.fill(Unknown Source)
> at java.io.BufferedInputStream.read1(Unknown Source)
> at java.io.BufferedInputStream.read(Unknown Source)
> at java.io.DataInputStream.read(Unknown Source)
> at org.apache.hadoop.io.IOUtils.readFully(IOUtils.java:199)
> at org.apache.hadoop.hdfs.protocol.datatransfer.PacketReceiver.doReadFully(PacketReceiver.java:213)
> at org.apache.hadoop.hdfs.protocol.datatransfer.PacketReceiver.doRead(PacketReceiver.java:134)
> at org.apache.hadoop.hdfs.protocol.datatransfer.PacketReceiver.receiveNextPacket(PacketReceiver.java:109)
> at org.apache.hadoop.hdfs.server.datanode.BlockReceiver.receivePacket(BlockReceiver.java:472)
> at org.apache.hadoop.hdfs.server.datanode.BlockReceiver.receiveBlock(BlockReceiver.java:849)
> at org.apache.hadoop.hdfs.server.datanode.DataXceiver.writeBlock(DataXceiver.java:807)
> at org.apache.hadoop.hdfs.protocol.datatransfer.Receiver.opWriteBlock(Receiver.java:137)
> at org.apache.hadoop.hdfs.protocol.datatransfer.Receiver.processOp(Receiver.java:74)
> at org.apache.hadoop.hdfs.server.datanode.DataXceiver.run(DataXceiver.java:251)
> at java.lang.Thread.run(Unknown Source)
> After this exception, HBase tried to close/rollover the WAL file but that call also failed and WAL file couldn't be closed. After this HBase closed the region server
> After some time, Lease Recovery got triggered for this file and following exceptions starts occurring:
> 2016-09-13 11:51:11,743 WARN org.apache.hadoop.hdfs.server.protocol.InterDatanodeProtocol: Failed to obtain replica info for block (=BP-337226066-192.168.193.217-1468912147102:blk_1074859607_1161187) from datanode (=DatanodeInfoWithStorage[192.168.192.162:50010,null,null])
> java.io.IOException: THIS IS NOT SUPPOSED TO HAPPEN: getBytesOnDisk() < getVisibleLength(), rip=ReplicaBeingWritten, blk_1074859607_1161187, RBW
> getNumBytes() = 45524696
> getBytesOnDisk() = 45483527
> getVisibleLength()= 45511557
> getVolume() = /opt/reflex/data/yarn/datanode/current
> getBlockFile() = /opt/reflex/data/yarn/datanode/current/BP-337226066-192.168.193.217-1468912147102/current/rbw/blk_1074859607
> bytesAcked=45511557
> bytesOnDisk=45483527
> at org.apache.hadoop.hdfs.server.datanode.fsdataset.impl.FsDatasetImpl.initReplicaRecovery(FsDatasetImpl.java:2278)
> at org.apache.hadoop.hdfs.server.datanode.fsdataset.impl.FsDatasetImpl.initReplicaRecovery(FsDatasetImpl.java:2254)
> at org.apache.hadoop.hdfs.server.datanode.DataNode.initReplicaRecovery(DataNode.java:2542)
> at org.apache.hadoop.hdfs.protocolPB.InterDatanodeProtocolServerSideTranslatorPB.initReplicaRecovery(InterDatanodeProtocolServerSideTranslatorPB.java:55)
> at org.apache.hadoop.hdfs.protocol.proto.InterDatanodeProtocolProtos$InterDatanodeProtocolService$2.callBlockingMethod(InterDatanodeProtocolProtos.java:3105)
> at org.apache.hadoop.ipc.ProtobufRpcEngine$Server$ProtoBufRpcInvoker.call(ProtobufRpcEngine.java:616)
> at org.apache.hadoop.ipc.RPC$Server.call(RPC.java:969)
> at org.apache.hadoop.ipc.Server$Handler$1.run(Server.java:2049)
> at org.apache.hadoop.ipc.Server$Handler$1.run(Server.java:2045)
> at java.security.AccessController.doPrivileged(Native Method)
> at javax.security.auth.Subject.doAs(Unknown Source)
> at org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1657)
> at org.apache.hadoop.ipc.Server$Handler.run(Server.java:2045)
> at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
> at sun.reflect.NativeConstructorAccessorImpl.newInstance(Unknown Source)
> at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(Unknown Source)
> at java.lang.reflect.Constructor.newInstance(Unknown Source)
> at org.apache.hadoop.ipc.RemoteException.instantiateException(RemoteException.java:106)
> at org.apache.hadoop.ipc.RemoteException.unwrapRemoteException(RemoteException.java:95)
> at org.apache.hadoop.hdfs.server.datanode.DataNode.callInitReplicaRecovery(DataNode.java:2555)
> at org.apache.hadoop.hdfs.server.datanode.DataNode.recoverBlock(DataNode.java:2625)
> at org.apache.hadoop.hdfs.server.datanode.DataNode.access$400(DataNode.java:243)
> at org.apache.hadoop.hdfs.server.datanode.DataNode$5.run(DataNode.java:2527)
> at java.lang.Thread.run(Unknown Source)
> Expected Behaviour: Under all conditions lease recovery should have been done and file should have been closed.
> Impact: Since the file couldn't be closed, HBase went into an incosistent state as it wasn't able to run through the WAL file after the region server restart.
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