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Posted to reviews@spark.apache.org by yanboliang <gi...@git.apache.org> on 2015/10/27 16:08:51 UTC
[GitHub] spark pull request: [SPARK-9492] [ML] [R] LogisticRegression in R ...
GitHub user yanboliang opened a pull request:
https://github.com/apache/spark/pull/9303
[SPARK-9492] [ML] [R] LogisticRegression in R should provide model statistics
Like ml ```LinearRegression```, ```LogisticRegression``` should provide a training summary including feature names and their coefficients.
You can merge this pull request into a Git repository by running:
$ git pull https://github.com/yanboliang/spark spark-9492
Alternatively you can review and apply these changes as the patch at:
https://github.com/apache/spark/pull/9303.patch
To close this pull request, make a commit to your master/trunk branch
with (at least) the following in the commit message:
This closes #9303
----
commit 9261dcb32e2e48980467a72fb6b7d4ace634f5f9
Author: Yanbo Liang <yb...@gmail.com>
Date: 2015-10-27T15:07:15Z
LogisticRegression in R should provide model statistics
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[GitHub] spark pull request: [SPARK-9492] [ML] [R] LogisticRegression in R ...
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the pull request:
https://github.com/apache/spark/pull/9303#issuecomment-151782157
**[Test build #44511 has finished](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/44511/consoleFull)** for PR 9303 at commit [`56bd22d`](https://github.com/apache/spark/commit/56bd22dbbd30893e0005c911ecca1836fcded185).
* This patch passes all tests.
* This patch merges cleanly.
* This patch adds no public classes.
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[GitHub] spark pull request: [SPARK-9492] [ML] [R] LogisticRegression in R ...
Posted by AmplabJenkins <gi...@git.apache.org>.
Github user AmplabJenkins commented on the pull request:
https://github.com/apache/spark/pull/9303#issuecomment-151542621
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[GitHub] spark pull request: [SPARK-9492] [ML] [R] LogisticRegression in R ...
Posted by mengxr <gi...@git.apache.org>.
Github user mengxr commented on the pull request:
https://github.com/apache/spark/pull/9303#issuecomment-153783295
LGTM. Merged into master. Thanks!
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[GitHub] spark pull request: [SPARK-9492] [ML] [R] LogisticRegression in R ...
Posted by AmplabJenkins <gi...@git.apache.org>.
Github user AmplabJenkins commented on the pull request:
https://github.com/apache/spark/pull/9303#issuecomment-151751169
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Posted by AmplabJenkins <gi...@git.apache.org>.
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[GitHub] spark pull request: [SPARK-9492] [ML] [R] LogisticRegression in R ...
Posted by AmplabJenkins <gi...@git.apache.org>.
Github user AmplabJenkins commented on the pull request:
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[GitHub] spark pull request: [SPARK-9492] [ML] [R] LogisticRegression in R ...
Posted by AmplabJenkins <gi...@git.apache.org>.
Github user AmplabJenkins commented on the pull request:
https://github.com/apache/spark/pull/9303#issuecomment-153559574
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[GitHub] spark pull request: [SPARK-9492] [ML] [R] LogisticRegression in R ...
Posted by mengxr <gi...@git.apache.org>.
Github user mengxr commented on the pull request:
https://github.com/apache/spark/pull/9303#issuecomment-153408653
@yanboliang Could you rebase master?
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[GitHub] spark pull request: [SPARK-9492] [ML] [R] LogisticRegression in R ...
Posted by AmplabJenkins <gi...@git.apache.org>.
Github user AmplabJenkins commented on the pull request:
https://github.com/apache/spark/pull/9303#issuecomment-151542623
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[GitHub] spark pull request: [SPARK-9492] [ML] [R] LogisticRegression in R ...
Posted by AmplabJenkins <gi...@git.apache.org>.
Github user AmplabJenkins commented on the pull request:
https://github.com/apache/spark/pull/9303#issuecomment-151751151
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[GitHub] spark pull request: [SPARK-9492] [ML] [R] LogisticRegression in R ...
Posted by asfgit <gi...@git.apache.org>.
Github user asfgit closed the pull request at:
https://github.com/apache/spark/pull/9303
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[GitHub] spark pull request: [SPARK-9492] [ML] [R] LogisticRegression in R ...
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the pull request:
https://github.com/apache/spark/pull/9303#issuecomment-153653503
**[Test build #45005 has finished](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/45005/consoleFull)** for PR 9303 at commit [`af3e7c7`](https://github.com/apache/spark/commit/af3e7c7e435b19a452b434e6a36618cd2ddf816c).
* This patch passes all tests.
* This patch merges cleanly.
* This patch adds the following public classes _(experimental)_:\n * `case class ExecutorLostFailure(`\n
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[GitHub] spark pull request: [SPARK-9492] [ML] [R] LogisticRegression in R ...
Posted by yanboliang <gi...@git.apache.org>.
Github user yanboliang commented on the pull request:
https://github.com/apache/spark/pull/9303#issuecomment-151536352
This PR depends on #9302 , after it merged I will add this test case which has passed on my local test environment.
```R
test_that("summary coefficients match with native glm of Logistic Regression", {
df <- createDataFrame(sqlContext, iris)
training <- filter(df, df$Species != "setosa")
stats <- summary(glm(Species ~ Sepal_Length + Sepal_Width, data = training, family = "binomial"))
coefs <- as.vector(stats$coefficients)
rTraining <- iris[iris$Species %in% c("versicolor","virginica"),]
rCoefs <- as.vector(coef(glm(Species ~ Sepal.Length + Sepal.Width, data = rTraining,
family = binomial(link = "logit"))))
expect_true(all(abs(rCoefs - coefs) < 1e-4))
expect_true(all(
as.character(stats$features) ==
c("(Intercept)", "Sepal_Length", "Sepal_Width")))
})
```
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[GitHub] spark pull request: [SPARK-9492] [ML] [R] LogisticRegression in R ...
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Github user SparkQA commented on the pull request:
https://github.com/apache/spark/pull/9303#issuecomment-151537110
**[Test build #44438 has started](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/44438/consoleFull)** for PR 9303 at commit [`9261dcb`](https://github.com/apache/spark/commit/9261dcb32e2e48980467a72fb6b7d4ace634f5f9).
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[GitHub] spark pull request: [SPARK-9492] [ML] [R] LogisticRegression in R ...
Posted by AmplabJenkins <gi...@git.apache.org>.
Github user AmplabJenkins commented on the pull request:
https://github.com/apache/spark/pull/9303#issuecomment-153653991
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[GitHub] spark pull request: [SPARK-9492] [ML] [R] LogisticRegression in R ...
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https://github.com/apache/spark/pull/9303#issuecomment-151751583
**[Test build #44511 has started](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/44511/consoleFull)** for PR 9303 at commit [`56bd22d`](https://github.com/apache/spark/commit/56bd22dbbd30893e0005c911ecca1836fcded185).
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[GitHub] spark pull request: [SPARK-9492] [ML] [R] LogisticRegression in R ...
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[GitHub] spark pull request: [SPARK-9492] [ML] [R] LogisticRegression in R ...
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https://github.com/apache/spark/pull/9303#issuecomment-153560170
**[Test build #44995 has started](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/44995/consoleFull)** for PR 9303 at commit [`af3e7c7`](https://github.com/apache/spark/commit/af3e7c7e435b19a452b434e6a36618cd2ddf816c).
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[GitHub] spark pull request: [SPARK-9492] [ML] [R] LogisticRegression in R ...
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[GitHub] spark pull request: [SPARK-9492] [ML] [R] LogisticRegression in R ...
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the pull request:
https://github.com/apache/spark/pull/9303#issuecomment-151542559
**[Test build #44438 has finished](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/44438/consoleFull)** for PR 9303 at commit [`9261dcb`](https://github.com/apache/spark/commit/9261dcb32e2e48980467a72fb6b7d4ace634f5f9).
* This patch **fails MiMa tests**.
* This patch merges cleanly.
* This patch adds no public classes.
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[GitHub] spark pull request: [SPARK-9492] [ML] [R] LogisticRegression in R ...
Posted by yanboliang <gi...@git.apache.org>.
Github user yanboliang commented on the pull request:
https://github.com/apache/spark/pull/9303#issuecomment-153615498
Jenkins, test this please.
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[GitHub] spark pull request: [SPARK-9492] [ML] [R] LogisticRegression in R ...
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the pull request:
https://github.com/apache/spark/pull/9303#issuecomment-153575454
**[Test build #44995 has finished](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/44995/consoleFull)** for PR 9303 at commit [`af3e7c7`](https://github.com/apache/spark/commit/af3e7c7e435b19a452b434e6a36618cd2ddf816c).
* This patch **fails Spark unit tests**.
* This patch merges cleanly.
* This patch adds no public classes.
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[GitHub] spark pull request: [SPARK-9492] [ML] [R] LogisticRegression in R ...
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