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Posted to commits@airavata.apache.org by sm...@apache.org on 2015/06/04 04:00:37 UTC
[07/17] airavata git commit: removing nested distribution modules,
this will be replaced by a single module which will use all required
packages defined within an assembly
http://git-wip-us.apache.org/repos/asf/airavata/blob/8c4ea1f0/modules/distribution/orchestrator-server/src/main/resources/NOTICE
----------------------------------------------------------------------
diff --git a/modules/distribution/orchestrator-server/src/main/resources/NOTICE b/modules/distribution/orchestrator-server/src/main/resources/NOTICE
deleted file mode 100644
index fa7cba5..0000000
--- a/modules/distribution/orchestrator-server/src/main/resources/NOTICE
+++ /dev/null
@@ -1,163 +0,0 @@
-Apache Airavata
-Copyright 2014 The Apache Software Foundation
-
-This product includes software developed at
-The Apache Software Foundation (http://www.apache.org/).
-
-===============================================================================
-Apache Xerces Java Notice:
-
- Portions of this software were originally based on the following:
- - software copyright (c) 1999, IBM Corporation., http://www.ibm.com.
- - software copyright (c) 1999, Sun Microsystems., http://www.sun.com.
- - voluntary contributions made by Paul Eng on behalf of the
- Apache Software Foundation that were originally developed at iClick, Inc.,
- software copyright (c) 1999.
-
-================================================================================
-Apache XmlBeans Notice:
-
- Portions of this software were originally based on the following:
- - software copyright (c) 2000-2003, BEA Systems, <http://www.bea.com/>.
-
- Aside from contributions to the Apache XMLBeans project, this
- software also includes:
-
- - one or more source files from the Apache Xerces-J and Apache Axis
- products, Copyright (c) 1999-2003 Apache Software Foundation
-
- - W3C XML Schema documents Copyright 2001-2003 (c) World Wide Web
- Consortium (Massachusetts Institute of Technology, European Research
- Consortium for Informatics and Mathematics, Keio University)
-
- - resolver.jar from Apache Xml Commons project,
- Copyright (c) 2001-2003 Apache Software Foundation
-
- - Piccolo XML Parser for Java from http://piccolo.sourceforge.net/,
- Copyright 2002 Yuval Oren under the terms of the Apache Software License 2.0
-
- - JSR-173 Streaming API for XML from http://sourceforge.net/projects/xmlpullparser/,
- Copyright 2005 BEA under the terms of the Apache Software License 2.0
-
-=========================================================================================
-Apache Axis2 Notice: (axis2-*, mex-1.5.1-impl)
-
-Portions Copyright 2006 International Business Machines Corp.
-Portions Copyright 2005-2007 WSO2, Inc.
-
-This product also includes schemas and specification developed by:
-- the W3C consortium (http://www.w3c.org)
-
-This product also includes WS-* schemas developed by International
-Business Machines Corporation, Microsoft Corporation, BEA Systems,
-TIBCO Software, SAP AG, Sonic Software, and VeriSign
-
-This product also includes a WSDL developed by salesforce.com
-- Copyright 1999-2006 salesforce.com, inc.
-Portions of the included xmlbeans library were originally based on the following:
-- software copyright (c) 2000-2003, BEA Systems, <http://www.bea.com/>.
-
-====================================================================================
-Apache Derby Notice:
-
-Portions of Derby were originally developed by
-International Business Machines Corporation and are
-licensed to the Apache Software Foundation under the
-"Software Grant and Corporate Contribution License Agreement",
-informally known as the "Derby CLA".
-The following copyright notice(s) were affixed to portions of the code
-with which this file is now or was at one time distributed
-and are placed here unaltered.
-
-(C) Copyright 1997,2004 International Business Machines Corporation. All rights reserved.
-
-(C) Copyright IBM Corp. 2003.
-
-=======================
-
-The portion of the functionTests under 'nist' was originally
-developed by the National Institute of Standards and Technology (NIST),
-an agency of the United States Department of Commerce, and adapted by
-International Business Machines Corporation in accordance with the NIST
-Software Acknowledgment and Redistribution document at
-http://www.itl.nist.gov/div897/ctg/sql_form.htm
-
-========================
-
-The JDBC apis for small devices and JDBC3 (under java/stubs/jsr169 and
-java/stubs/jdbc3) were produced by trimming sources supplied by the
-Apache Harmony project. In addition, the Harmony SerialBlob and
-SerialClob implementations are used. The following notice covers the Harmony sources:
-
-Portions of Harmony were originally developed by
-Intel Corporation and are licensed to the Apache Software
-Foundation under the "Software Grant and Corporate Contribution
-License Agreement", informally known as the "Intel Harmony CLA".
-
-=============================================================================
-Apache Woden Notice:
-
- This product also includes software developed by :
-
- - IBM Corporation (http://www.ibm.com),
- WSDL4J was the initial code contribution for the Apache Woden
- project and some of the WSDL4J design and code has been reused.
- - The W3C Consortium (http://www.w3c.org),
- Common W3C XML Schema and DTD files are packaged with Apache Woden.
-
- Please read the different LICENSE files present in the root directory of
- this distribution.
-
-=========================================================================
-Woodstox Notice:
-
-This product includes software developed by the Woodstox Project
-(http://woodstox.codehaus.org/)
-
-This product currently only contains code developed by authors
-of specific components, as identified by the source code files.
-
-Since product implements StAX API, it has dependencies to StAX API
-classes.
-
-For additional credits (generally to people who reported problems)
-see CREDITS file.
-
-===========================================================================
-Apache xml-commons xml-apis Notice:
-
- Portions of this software were originally based on the following:
- - software copyright (c) 1999, IBM Corporation., http://www.ibm.com.
- - software copyright (c) 1999, Sun Microsystems., http://www.sun.com.
- - software copyright (c) 2000 World Wide Web Consortium, http://www.w3.org
-
-================================================================================================
-Apache Xalan Notice:
-
-Portions of this software was originally based on the following:
- - software copyright (c) 1999-2002, Lotus Development Corporation., http://www.lotus.com.
- - software copyright (c) 2001-2002, Sun Microsystems., http://www.sun.com.
- - software copyright (c) 2003, IBM Corporation., http://www.ibm.com.
- - voluntary contributions made by Ovidiu Predescu (ovidiu@cup.hp.com) on behalf of the
- Apache Software Foundation and was originally developed at Hewlett Packard Company.
-================================================================================================
-Apache OpenJPA Notice:
-
-OpenJPA includes software developed by the SERP project
-Copyright (c) 2002-2006, A. Abram White. All rights reserved.
-
-OpenJPA includes the persistence and orm schemas from the JPA specifications.
-Copyright 2005-2009 Sun Microsystems, Inc. All rights reserved.
-OpenJPA elects to include this software in this distribution under the
-CDDL license. You can obtain a copy of the License at:
- https://glassfish.dev.java.net/public/CDDL+GPL.html
-The source code is available at:
- https://glassfish.dev.java.net/source/browse/glassfish/
-
-OpenJPA includes software written by Miroslav Nachev
-OpenJPA uses test code written by Charles Tillman.
-================================================================================================
-Apache XmlSchema Notice:
-
-Portions Copyright 2006 International Business Machines Corp.
-================================================================================================
http://git-wip-us.apache.org/repos/asf/airavata/blob/8c4ea1f0/modules/distribution/orchestrator-server/src/main/resources/README
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diff --git a/modules/distribution/orchestrator-server/src/main/resources/README b/modules/distribution/orchestrator-server/src/main/resources/README
deleted file mode 100644
index 1539b8c..0000000
--- a/modules/distribution/orchestrator-server/src/main/resources/README
+++ /dev/null
@@ -1,121 +0,0 @@
-Apache Airavata Server - README.txt
-Licensed under Apache License 2.0 - http://www.apache.org/licenses/LICENSE-2.0
---------------------------------------------------------------------------------
-
-About
-=====
-Apache Airavata, a software framework to executing and managing computational jobs on
-distributed computing resources including local clusters, supercomputers, national grids,
-academic and commercial clouds. Airavata can be used as individual components or
-as an integrated solution to build science gateways or general-purpose distributed
-application and workflow management systems. Users can use Airavata back end services
-and build gadgets to deploy in open social containers such as Apache Rave and modify them
-to suit their needs. Airavata builds on general concepts of service oriented computing,
-distributed messaging, and workflow composition and orchestration.
-
-This distribution allows you to run a standalone Airavata Server which includes all the
-airavata services shipped with a default derby database as the backend registry.
-
-Release Notes
-=============
-0.11 is the tenth release of Airavata (skipped 0.1-INCUBATNG). This release focuses bug fixes and GSISSH library for beta testing. For detailed tasks list, please see RELEASE_NOTES.
-
-Building from source
-====================
-For brief installation instructions, see INSTALL
-For detailed installation and further instructions refer http://airavata.apache.org/ - Documentation section in left hand panel. Step by step with proper documentation are provided.
-
-Known Issues in This Release
-============================
-This is the base release and is focused on a good foundation and less on features. This
-version is not recommended for production usage.
-
-Airavata Binary Distribution Directory Structure
-================================================
-
- AIRAVATA_HOME
- ├── bin
- │ ├── database_scripts <dir>
- │ ├── airavata-server.bat
- │ ├── airavata-server.properties
- │ ├── airavata-server.sh
- │ ├── authenticators.xml
- │ ├── axis2.xml
- │ ├── derby.sh
- │ ├── host.xml
- │ ├── log4j.properties
- │ ├── logo.txt
- │ ├── setenv.bat
- │ ├── setenv.sh
- │ └── startNetworkServer
- ├── lib <dir>
- ├── repository
- │ ├── modules
- │ └── services
- ├── samples
- │ ├── workflows <dir>
- │ ├── echo_out.sh
- │ └── echo.sh
- ├── INSTALL
- ├── LICENSE
- ├── NOTICE
- └── README
-
-
-How to test and run samples
-===========================
-* If you built Airavata from source, and if you see "BUILD SUCCESS", then the test cases should have passes.
-* The test cases are beyond unit level, they startup embedded services and run through basic workflow use cases.
-* To walk through Airavata features, follow "Airavata in Five Minutes" tutorial at http://airavata.apache.org/documentation/tutorials/airavata-in-5-minutes.html
-* For intermediate level Airavata features, follow "Airavata in Ten Minutes" tutorial at http://airavata.apache.org/documentation/tutorials/airavata-in-10-minutes.html
-* For advanced use cases, please contact mailing lists - http://airavata.apache.org/community/mailing-lists.html
-
-Description of Directory Structure
-==================================
- - bin
- This contains all the configuration files & the executable scripts to run the Airavata Server (Axis2 server
- with Airavata services which include messageBroker and messageBox with GFac Axis2 services), & a standalone Apache Derby server.
-
- - bin - database_scripts
- Contains the database scripts which are used to create tables for messagebox and messagebroker services
-
- - samples
- This contains sample workflow to try out & sample application scripts.
-
- - lib
- This contains all the libraries required to run the airavata server and/or derby server.
-
- - repository - services
- Contains deployed services in Axis2 runtime.
-
- - README
- This document.
-
- - INSTALL
- This document will contain information on installing Apache-Airavata.
-
-
-Other Available Distributions
-=============================
-
-Server Distributions
---------------------
-* Airavata Server
- The Airavata Server binary distribution allows you to run a standalone Airavata Server which includes all the airavata services
- shipped with a default derby database as the backend registry. For stable purposes, a mysql configuration is recommended.
-
-* Airavata Server Web Application
- This is similar package as the Airavata Server but is distributed as the server Web Application archive.
- This war is compatible with Apache Tomcat application server. The war bundles all airavata services
- enabled by defualt to startup a derby database as the backend registry. For stable purposes, a mysql configuration is recommended.
-
-Client Distributions
---------------------
-* Airavata XBaya
- The Airavata XBaya distribution is a client GUI application with features to register applications as web services, construct workflows,
- execute and monitor workflows and browse the generated results from the airavata registry.
-
-* Airavata XBaya JNLP
- The Airavata XBaya JNLP distribution is the simular GUI distribution but prepackeged to be ready to be deployed to
- a web server as a web start application. The GUI provides features to register applications as web services, construct workflows,
- execute and monitor workflows and browse the generated results from the airavata registry.
http://git-wip-us.apache.org/repos/asf/airavata/blob/8c4ea1f0/modules/distribution/orchestrator-server/src/main/resources/bin/logo.txt
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diff --git a/modules/distribution/orchestrator-server/src/main/resources/bin/logo.txt b/modules/distribution/orchestrator-server/src/main/resources/bin/logo.txt
deleted file mode 100644
index e886438..0000000
--- a/modules/distribution/orchestrator-server/src/main/resources/bin/logo.txt
+++ /dev/null
@@ -1,34 +0,0 @@
-...._....................._..............._...._......................_.........
-.../ \..._.__...__._..___| |__...___...../ \..(_)_.__.__.___...____._|.|_.__._..
-../ _ \.| '_ \./ _` |/ __| '_ \./ _ \.../ _ \.| | '__/ _` \ \./ / _` | __/ _` |.
-./ ___ \| |_) | (_| | (__| |.| | __/../ ___ \| | |.| (_| |\ V / (_| | || (_| |.
-/_/...\_\ .__/.\__,_|\___|_|.|_|\___|./_/...\_\_|_|..\__,_|.\_/.\__,_|\__\__,_|.
-........|_|.....................................................................
-................................................................................
-................,+????++~..~~++..+????????+??++.++~...~+=???+++.................
-..............:???????....:::...~??????????????.~..::...=????????...............
-............????????..~~..?????..??????????????.?????..~~~.~???????.............
-...........?????????I,~I~~??????.+????????????.~??????~=~..?????????~...........
-.........?????++??????..????????:.??????????I..????????..????????+????..........
-........??.....???????....???????...???????+..+??????+.I.????????.....?,........
-........????==????????..??..?????..=???????=..?????,.=+?.?????????===??=........
-......=??????????+????..+??=.???=.~??????????,.???=,???,.????=+??????????.......
-....??????????+...+I++..???,=...:??????????????.....+??..++I?+..,??????????.....
-....???????=??..........??..+??.:=:.???????......??..??=..........?=???????=....
-....??????..?...........+?..???.....???????......???.??...........~=.??????=....
-....~???~.~..............?..???.~=..,??????...7..???.?.:..............~????:....
-...7....7 ...............?..????. ...??????... .????.?.?.............I ..:.:....
-.....+7=,.+?................????:,I...?????..=.?????.?.............??~.=7+......
-..........????..............??????~...~??..~~??????..?...........+???,..........
-...........???............=.+???????,.?+:.?????????..+...........???+...........
-............??............?,.??????.,??..??????????.,............???............
-...........??,.............=.,????.?+....????????I.I..............=?............
-..........I?..................+??.:?~.....=??????..................??...........
-..........??...?...............??.:?=......??????..............?...??...........
-............++?..............?.????...?....??????.+..............++I............
-.............................?.??????~....???????.?.............................
-............................~~.??????......??????...............................
-.............................=???????......???????+.............................
-..........................=I??++?+++?......?+++++++?+...........................
-..........................,..77..77......... .. ...7..........................
-................................................................................
http://git-wip-us.apache.org/repos/asf/airavata/blob/8c4ea1f0/modules/distribution/orchestrator-server/src/main/resources/bin/orchestrator-server.sh
----------------------------------------------------------------------
diff --git a/modules/distribution/orchestrator-server/src/main/resources/bin/orchestrator-server.sh b/modules/distribution/orchestrator-server/src/main/resources/bin/orchestrator-server.sh
deleted file mode 100755
index 5fa73e7..0000000
--- a/modules/distribution/orchestrator-server/src/main/resources/bin/orchestrator-server.sh
+++ /dev/null
@@ -1,118 +0,0 @@
-#!/bin/bash
-
-# Licensed to the Apache Software Foundation (ASF) under one
-# or more contributor license agreements. See the NOTICE file
-# distributed with this work for additional information
-# regarding copyright ownership. The ASF licenses this file
-# to you under the Apache License, Version 2.0 (the
-# "License"); you may not use this file except in compliance
-# with the License. You may obtain a copy of the License at
-#
-# http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing,
-# software distributed under the License is distributed on an
-# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
-# KIND, either express or implied. See the License for the
-# specific language governing permissions and limitations
-# under the License.
-
-. `dirname $0`/setenv.sh
-cd $AIRAVATA_HOME/bin
-LOGO_FILE="logo.txt"
-
-JAVA_OPTS=""
-AIRAVATA_COMMAND=""
-IS_DAEMON_MODE=false
-LOGO=true
-STOP=false
-FORCE=false
-SERVERS="--servers=orchestrator"
-for var in "$@"
-do
- case $var in
- -xdebug)
- JAVA_OPTS="$JAVA_OPTS -Xdebug -Xnoagent -Xrunjdwp:transport=dt_socket,server=y,address=8000"
- AIRAVATA_COMMAND="$AIRAVATA_COMMAND $SERVERS"
- shift
- ;;
- -security)
- JAVA_OPTS="$JAVA_OPTS -Djava.security.manager -Djava.security.policy=$AIRAVATA_HOME/conf/axis2.policy -Daxis2.home=$AIRAVATA_HOME"
- shift
- ;;
- start)
- AIRAVATA_COMMAND="$AIRAVATA_COMMAND $SERVERS"
- IS_DAEMON_MODE=true
- shift
- ;;
- stop)
- LOGO=false
- STOP=true
- AIRAVATA_COMMAND="$AIRAVATA_COMMAND $var"
- shift
- ;;
- --force)
- FORCE=true
- shift
- ;;
- -nologo)
- LOGO=false
- shift
- ;;
- -h)
- echo "Usage: airavata-server.sh [command-options]"
- echo "command options:"
- echo " start Start server in daemon mode"
- echo " stop [--force] Stop all airavata servers."
- echo " --<key>[=<value>] Server setting(s) to override or introduce (overrides values in airavata-server.properties)"
- echo " -nologo Do not show airavata logo"
- echo " -xdebug Start Airavata Server under JPDA debugger"
- echo " -security Enable Java 2 security"
- echo " -h Display this help and exit"
- shift
- exit 0
- ;;
- *)
- AIRAVATA_COMMAND="$AIRAVATA_COMMAND $SERVERS $var"
- shift
- esac
-done
-if $LOGO ; then
- if [ -e $LOGO_FILE ]
- then
- cat $LOGO_FILE
- fi
-fi
-if $STOP && $FORCE ;
-then
- for f in `find . -name "server-start_*"`; do
- f_split=(${f//_/ });
- echo "Found process file : $f"
- echo -n " Sending kill signals to process ${f_split[1]}..."
- out=`kill -9 ${f_split[1]} 2>&1`
- if [ -z "$out" ]; then
- echo "done"
- else
- echo "failed (REASON: $out)"
- fi
- echo -n " Removing process file..."
- out=`rm $f 2>&1`
- if [ -z "$out" ]; then
- echo "done"
- else
- echo "failed (REASON: $out)"
- fi
- done
-else
- if $IS_DAEMON_MODE ; then
- echo "Starting airavata server in daemon mode..."
- nohup java $JAVA_OPTS -classpath "$XBAYA_CLASSPATH" \
- -Djava.endorsed.dirs="$AIRAVATA_HOME/lib/endorsed":"$JAVA_HOME/jre/lib/endorsed":"$JAVA_HOME/lib/endorsed" \
- org.apache.airavata.server.ServerMain $AIRAVATA_COMMAND $* > orchestrator-server.out &
- else
- java $JAVA_OPTS -classpath "$XBAYA_CLASSPATH" \
- -Djava.endorsed.dirs="$AIRAVATA_HOME/lib/endorsed":"$JAVA_HOME/jre/lib/endorsed":"$JAVA_HOME/lib/endorsed" \
- org.apache.airavata.server.ServerMain $AIRAVATA_COMMAND $*
- fi
-fi
-
http://git-wip-us.apache.org/repos/asf/airavata/blob/8c4ea1f0/modules/distribution/orchestrator-server/src/main/resources/bin/setenv.bat
----------------------------------------------------------------------
diff --git a/modules/distribution/orchestrator-server/src/main/resources/bin/setenv.bat b/modules/distribution/orchestrator-server/src/main/resources/bin/setenv.bat
deleted file mode 100644
index 223f8cd..0000000
--- a/modules/distribution/orchestrator-server/src/main/resources/bin/setenv.bat
+++ /dev/null
@@ -1,43 +0,0 @@
-rem Licensed to the Apache Software Foundation (ASF) under one
-rem or more contributor license agreements. See the NOTICE file
-rem distributed with this work for additional information
-rem regarding copyright ownership. The ASF licenses this file
-rem to you under the Apache License, Version 2.0 (the
-rem "License"); you may not use this file except in compliance
-rem with the License. You may obtain a copy of the License at
-rem
-rem http://www.apache.org/licenses/LICENSE-2.0
-rem
-rem Unless required by applicable law or agreed to in writing,
-rem software distributed under the License is distributed on an
-rem "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
-rem KIND, either express or implied. See the License for the
-rem specific language governing permissions and limitations
-rem under the License.
-
-@echo off
-
-:checkJava
-if "%JAVA_HOME%" == "" goto noJavaHome
-if not exist "%JAVA_HOME%\bin\java.exe" goto noJavaHome
-goto initialize
-
-:noJavaHome
-echo You must set the JAVA_HOME environment variable before running Airavata.
-goto end
-
-:initialize
-if "%AIRAVATA_HOME%"=="" set AIRAVATA_HOME=%~sdp0..
-SET curDrive=%cd:~0,1%
-SET airavataDrive=%AIRAVATA_HOME:~0,1%
-if not "%curDrive%" == "%airavataDrive%" %airavataDrive%:
-goto updateClasspath
-
-rem ----- update classpath -----------------------------------------------------
-:updateClasspath
-cd %AIRAVATA_HOME%
-set XBAYA_CLASSPATH=
-FOR %%C in ("%AIRAVATA_HOME%\lib\*.jar") DO set XBAYA_CLASSPATH=!XBAYA_CLASSPATH!;..\lib\%%~nC%%~xC
-FOR %%C in ("%AIRAVATA_HOME%\repository\services\*.jar") DO set XBAYA_CLASSPATH=!XBAYA_CLASSPATH!;..\repository\services\%%~nC%%~xC
-
-:end
\ No newline at end of file
http://git-wip-us.apache.org/repos/asf/airavata/blob/8c4ea1f0/modules/distribution/orchestrator-server/src/main/resources/bin/setenv.sh
----------------------------------------------------------------------
diff --git a/modules/distribution/orchestrator-server/src/main/resources/bin/setenv.sh b/modules/distribution/orchestrator-server/src/main/resources/bin/setenv.sh
deleted file mode 100755
index 84673db..0000000
--- a/modules/distribution/orchestrator-server/src/main/resources/bin/setenv.sh
+++ /dev/null
@@ -1,77 +0,0 @@
-#!/bin/sh
-
-# Licensed to the Apache Software Foundation (ASF) under one
-# or more contributor license agreements. See the NOTICE file
-# distributed with this work for additional information
-# regarding copyright ownership. The ASF licenses this file
-# to you under the Apache License, Version 2.0 (the
-# "License"); you may not use this file except in compliance
-# with the License. You may obtain a copy of the License at
-#
-# http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing,
-# software distributed under the License is distributed on an
-# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
-# KIND, either express or implied. See the License for the
-# specific language governing permissions and limitations
-# under the License.
-
-
-# Get standard environment variables
-# if JAVA_HOME is not set we're not happy
-if [ -z "$JAVA_HOME" ]; then
- echo "You must set the JAVA_HOME variable before running Airavata Scripts."
- exit 1
-fi
-
-# OS specific support. $var _must_ be set to either true or false.
-cygwin=false
-os400=false
-case "`uname`" in
-CYGWIN*) cygwin=true;;
-OS400*) os400=true;;
-esac
-
-# resolve links - $0 may be a softlink
-PRG="$0"
-
-while [ -h "$PRG" ]; do
- ls=`ls -ld "$PRG"`
- link=`expr "$ls" : '.*-> \(.*\)$'`
- if expr "$link" : '.*/.*' > /dev/null; then
- PRG="$link"
- else
- PRG=`dirname "$PRG"`/"$link"
- fi
-done
-
-
-PRGDIR=`dirname "$PRG"`
-
-# Only set AIRAVATA_HOME if not already set
-[ -z "$AIRAVATA_HOME" ] && AIRAVATA_HOME=`cd "$PRGDIR/.." ; pwd`
-
-XBAYA_CLASSPATH=""
-
-
-
-for f in "$AIRAVATA_HOME"/lib/*.jar
-do
- XBAYA_CLASSPATH="$XBAYA_CLASSPATH":$f
-done
-
-for f in "$AIRAVATA_HOME"/repository/services/*.jar
-do
- XBAYA_CLASSPATH="$XBAYA_CLASSPATH":$f
-done
-
-XBAYA_CLASSPATH="$XBAYA_HOME":"$XBAYA_HOME/conf":"$XBAYA_CLASSPATH":"$CLASSPATH"
-
-
-
-
-export AIRAVATA_HOME
-export XBAYA_CLASSPATH
-
-
http://git-wip-us.apache.org/repos/asf/airavata/blob/8c4ea1f0/modules/distribution/pom.xml
----------------------------------------------------------------------
diff --git a/modules/distribution/pom.xml b/modules/distribution/pom.xml
deleted file mode 100644
index 843fde7..0000000
--- a/modules/distribution/pom.xml
+++ /dev/null
@@ -1,46 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-
-<!--Licensed to the Apache Software Foundation (ASF) under one or more contributor license agreements. See the NOTICE file
- distributed with this work for additional information regarding copyright ownership. The ASF licenses this file to you under
- the Apache License, Version 2.0 (theÏ "License"); you may not use this file except in compliance with the License. You may
- obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to
- in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF
- ANY ~ KIND, either express or implied. See the License for the specific language governing permissions and limitations under
- the License. -->
-
-<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
- <parent>
- <groupId>org.apache.airavata</groupId>
- <artifactId>airavata</artifactId>
- <version>0.16-SNAPSHOT</version>
- <relativePath>../../pom.xml</relativePath>
- </parent>
-
- <modelVersion>4.0.0</modelVersion>
- <artifactId>distribution</artifactId>
- <name>distribution</name>
- <packaging>pom</packaging>
- <url>http://airavata.apache.org/</url>
- <profiles>
- <profile>
- <id>default</id>
- <activation>
- <activeByDefault>true</activeByDefault>
- </activation>
- <modules>
- <module>new-dist</module>
- <module>server</module>
- <module>client</module>
- <module>xbaya-gui</module>
- <module>api-server</module>
- <module>orchestrator-server</module>
- <module>gfac-server</module>
- <module>release</module>
- </modules>
- </profile>
- </profiles>
- <properties>
- <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
- <project.reporting.outputEncoding>UTF-8</project.reporting.outputEncoding>
- </properties>
-</project>
http://git-wip-us.apache.org/repos/asf/airavata/blob/8c4ea1f0/modules/distribution/release/pom.xml
----------------------------------------------------------------------
diff --git a/modules/distribution/release/pom.xml b/modules/distribution/release/pom.xml
deleted file mode 100644
index 1d7882a..0000000
--- a/modules/distribution/release/pom.xml
+++ /dev/null
@@ -1,117 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-
-<!--Licensed to the Apache Software Foundation (ASF) under one or more contributor license agreements. See the NOTICE file
- distributed with this work for additional information regarding copyright ownership. The ASF licenses this file to you under
- the Apache License, Version 2.0 (theÏ "License"); you may not use this file except in compliance with the License. You may
- obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to
- in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF
- ANY ~ KIND, either express or implied. See the License for the specific language governing permissions and limitations under
- the License. -->
-
-<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
- <parent>
- <groupId>org.apache.airavata</groupId>
- <artifactId>distribution</artifactId>
- <version>0.16-SNAPSHOT</version>
- <relativePath>../pom.xml</relativePath>
- </parent>
-
- <modelVersion>4.0.0</modelVersion>
- <artifactId>apache-airavata-release-artifacts</artifactId>
- <name>Airavata release artifacts</name>
- <packaging>pom</packaging>
- <url>http://airavata.apache.org/</url>
-
- <build>
- <plugins>
- <plugin>
- <groupId>org.apache.maven.plugins</groupId>
- <artifactId>maven-dependency-plugin</artifactId>
- <version>2.6</version>
- <executions>
- <execution>
- <id>copy-artifacts</id>
- <phase>package</phase>
- <goals>
- <goal>copy</goal>
- </goals>
- <configuration>
- <artifactItems>
- <!--Airavata Server Distributions-->
- <artifactItem>
- <groupId>org.apache.airavata</groupId>
- <artifactId>apache-airavata-server</artifactId>
- <version>${project.version}</version>
- <type>zip</type>
- <classifier>bin</classifier>
- </artifactItem>
- <artifactItem>
- <groupId>org.apache.airavata</groupId>
- <artifactId>apache-airavata-server</artifactId>
- <version>${project.version}</version>
- <type>tar.gz</type>
- <classifier>bin</classifier>
- </artifactItem>
- <!--Airavata Client Distributions-->
- <!--Java SDK-->
- <artifactItem>
- <groupId>org.apache.airavata</groupId>
- <artifactId>apache-airavata-client-java-sdk</artifactId>
- <version>${project.version}</version>
- <type>zip</type>
- <classifier>bin</classifier>
- </artifactItem>
- <artifactItem>
- <groupId>org.apache.airavata</groupId>
- <artifactId>apache-airavata-client-java-sdk</artifactId>
- <version>${project.version}</version>
- <type>tar.gz</type>
- <classifier>bin</classifier>
- </artifactItem>
- <!--PHP SDK-->
- <artifactItem>
- <groupId>org.apache.airavata</groupId>
- <artifactId>apache-airavata-client-php-sdk</artifactId>
- <version>${project.version}</version>
- <type>zip</type>
- <classifier>bin</classifier>
- </artifactItem>
- <artifactItem>
- <groupId>org.apache.airavata</groupId>
- <artifactId>apache-airavata-client-php-sdk</artifactId>
- <version>${project.version}</version>
- <type>tar.gz</type>
- <classifier>bin</classifier>
- </artifactItem>
- <!--CPP SDK-->
- <artifactItem>
- <groupId>org.apache.airavata</groupId>
- <artifactId>apache-airavata-client-cpp-sdk</artifactId>
- <version>${project.version}</version>
- <type>zip</type>
- <classifier>bin</classifier>
- </artifactItem>
- <artifactItem>
- <groupId>org.apache.airavata</groupId>
- <artifactId>apache-airavata-client-cpp-sdk</artifactId>
- <version>${project.version}</version>
- <type>tar.gz</type>
- <classifier>bin</classifier>
- </artifactItem>
- </artifactItems>
- <outputDirectory>${project.build.directory}/release-artifacts</outputDirectory>
- </configuration>
- </execution>
- </executions>
- </plugin>
- </plugins>
- </build>
-
- <properties>
- <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
- <archieve.name>apache-airavata-client</archieve.name>
- <airavata.client-dist.name>${archieve.name}-${project.version}</airavata.client-dist.name>
- <airavata.client-bin.zip>${project.build.directory}/${airavata.client-dist.name}-bin.zip</airavata.client-bin.zip>
- <airavata.client-bin.tar.gz>${project.build.directory}/${airavata.client-dist.name}-bin.tar.gz</airavata.client-bin.tar.gz>
- </properties>
-</project>
http://git-wip-us.apache.org/repos/asf/airavata/blob/8c4ea1f0/modules/distribution/server/pom.xml
----------------------------------------------------------------------
diff --git a/modules/distribution/server/pom.xml b/modules/distribution/server/pom.xml
deleted file mode 100644
index cf8a73c..0000000
--- a/modules/distribution/server/pom.xml
+++ /dev/null
@@ -1,587 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-
-<!--Licensed to the Apache Software Foundation (ASF) under one or more contributor
- license agreements. See the NOTICE file distributed with this work for additional
- information regarding copyright ownership. The ASF licenses this file to
- you under the Apache License, Version 2.0 (theÏ "License"); you may not use
- this file except in compliance with the License. You may obtain a copy of
- the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required
- by applicable law or agreed to in writing, software distributed under the
- License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS
- OF ANY ~ KIND, either express or implied. See the License for the specific
- language governing permissions and limitations under the License. -->
-
-<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
- <parent>
- <groupId>org.apache.airavata</groupId>
- <artifactId>distribution</artifactId>
- <version>0.16-SNAPSHOT</version>
- <relativePath>../pom.xml</relativePath>
- </parent>
-
- <modelVersion>4.0.0</modelVersion>
- <artifactId>apache-airavata-server</artifactId>
- <name>Airavata server distribution</name>
- <packaging>pom</packaging>
- <url>http://airavata.apache.org/</url>
-
- <build>
- <plugins>
- <plugin>
- <groupId>org.apache.maven.plugins</groupId>
- <artifactId>maven-dependency-plugin</artifactId>
- <version>2.8</version>
- <executions>
- <execution>
- <id>unpack</id>
- <phase>compile</phase>
- <goals>
- <goal>unpack</goal>
- </goals>
- <configuration>
- <artifactItems>
- <artifactItem>
- <groupId>org.apache.airavata</groupId>
- <artifactId>airavata-server-configuration</artifactId>
- <version>${project.version}</version>
- <type>jar</type>
- </artifactItem>
- </artifactItems>
- <!--includes>**/*.war</includes -->
- <outputDirectory>${project.build.directory}/conf</outputDirectory>
- </configuration>
- </execution>
- </executions>
- </plugin>
-
- <plugin>
- <groupId>org.codehaus.gmaven</groupId>
- <artifactId>gmaven-plugin</artifactId>
- <version>1.4</version>
- <executions>
- <execution>
- <id>generate-timestamp</id>
- <phase>package</phase>
- <goals>
- <goal>execute</goal>
- </goals>
- <configuration>
- <source>
- import java.util.Date
- import java.text.MessageFormat
- project.properties['buildTimestamp'] =
- MessageFormat.format("{0,date,dd-MM-yyyy}", new
- Date())
- </source>
- </configuration>
- </execution>
- </executions>
- </plugin>
- <plugin>
- <groupId>org.apache.maven.plugins</groupId>
- <artifactId>maven-assembly-plugin</artifactId>
- <executions>
- <execution>
- <id>distribution-package</id>
- <phase>package</phase>
- <goals>
- <goal>single</goal>
- </goals>
- <configuration>
- <finalName>${archieve.name}-${project.version}</finalName>
- <descriptors>
- <descriptor>src/main/assembly/bin-assembly.xml</descriptor>
- <!-- <descriptor>src/main/assembly/src-assembly.xml</descriptor> -->
- </descriptors>
- <attach>false</attach>
- </configuration>
- </execution>
- </executions>
- </plugin>
-
- <plugin>
- <groupId>org.codehaus.mojo</groupId>
- <artifactId>build-helper-maven-plugin</artifactId>
- <version>1.7</version>
- <executions>
- <execution>
- <id>attach-artifacts</id>
- <phase>package</phase>
- <goals>
- <goal>attach-artifact</goal>
- </goals>
- <configuration>
- <artifacts>
- <artifact>
- <file>${airavata.bin.zip}</file>
- <type>zip</type>
- <classifier>bin</classifier>
- </artifact>
- <artifact>
- <file>${airavata.bin.tar.gz}</file>
- <type>tar.gz</type>
- <classifier>bin</classifier>
- </artifact>
- </artifacts>
- </configuration>
- </execution>
- </executions>
- </plugin>
- </plugins>
- </build>
-
- <dependencies>
- <dependency>
- <groupId>org.apache.derby</groupId>
- <artifactId>derby</artifactId>
- <version>${derby.version}</version>
- </dependency>
- <dependency>
- <groupId>org.apache.derby</groupId>
- <artifactId>derbyclient</artifactId>
- <version>${derby.version}</version>
- </dependency>
- <dependency>
- <groupId>org.apache.derby</groupId>
- <artifactId>derbynet</artifactId>
- <version>${derby.version}</version>
- </dependency>
- <dependency>
- <groupId>org.apache.derby</groupId>
- <artifactId>derbytools</artifactId>
- <version>${derby.version}</version>
- </dependency>
- <dependency>
- <groupId>org.slf4j</groupId>
- <artifactId>slf4j-api</artifactId>
- </dependency>
- <dependency>
- <groupId>org.slf4j</groupId>
- <artifactId>jcl-over-slf4j</artifactId>
- </dependency>
- <dependency>
- <groupId>org.slf4j</groupId>
- <artifactId>slf4j-log4j12</artifactId>
- </dependency>
- <dependency>
- <groupId>log4j</groupId>
- <artifactId>log4j</artifactId>
- </dependency>
- <dependency>
- <groupId>com.amazonaws</groupId>
- <artifactId>aws-java-sdk</artifactId>
- <version>1.9.0</version>
- <exclusions>
- <exclusion>
- <groupId>org.apache.httpcomponents</groupId>
- <artifactId>httpclient</artifactId>
- </exclusion>
- </exclusions>
- </dependency>
- <dependency>
- <groupId>net.java.dev.jets3t</groupId>
- <artifactId>jets3t</artifactId>
- <version>0.8.0</version>
- </dependency>
- <dependency>
- <groupId>commons-collections</groupId>
- <artifactId>commons-collections</artifactId>
- <version>3.2.1</version>
- </dependency>
- <dependency>
- <groupId>commons-lang</groupId>
- <artifactId>commons-lang</artifactId>
- <version>2.4</version>
- </dependency>
- <dependency>
- <groupId>commons-io</groupId>
- <artifactId>commons-io</artifactId>
- <version>2.4</version>
- </dependency>
- <dependency>
- <groupId>commons-codec</groupId>
- <artifactId>commons-codec</artifactId>
- <version>1.6</version>
- </dependency>
- <dependency>
- <groupId>org.apache.airavata</groupId>
- <artifactId>airavata-standalone-server</artifactId>
- <version>${project.version}</version>
- </dependency>
- <dependency>
- <groupId>org.apache.airavata</groupId>
- <artifactId>app-catalog-cpi</artifactId>
- <version>${project.version}</version>
- </dependency>
- <dependency>
- <groupId>org.apache.airavata</groupId>
- <artifactId>airavata-messaging-core</artifactId>
- <version>${project.version}</version>
- </dependency>
- <dependency>
- <groupId>org.apache.airavata</groupId>
- <artifactId>app-catalog-data</artifactId>
- <version>${project.version}</version>
- </dependency>
- <dependency>
- <groupId>org.apache.airavata</groupId>
- <artifactId>airavata-common-utils</artifactId>
- <version>${project.version}</version>
- <exclusions>
- <exclusion>
- <groupId>org.apache.ws.commons.schema</groupId>
- <artifactId>XmlSchema</artifactId>
- </exclusion>
- <exclusion>
- <groupId>xerces</groupId>
- <artifactId>xmlParserAPIs</artifactId>
- </exclusion>
- <exclusion>
- <groupId>org.apache.neethi</groupId>
- <artifactId>neethi</artifactId>
- </exclusion>
- </exclusions>
- </dependency>
- <dependency>
- <groupId>org.apache.airavata</groupId>
- <artifactId>orchestrator-service</artifactId>
- <version>${project.version}</version>
- <exclusions>
- <exclusion>
- <groupId>org.apache.ws.commons.schema</groupId>
- <artifactId>XmlSchema</artifactId>
- </exclusion>
- <exclusion>
- <groupId>xerces</groupId>
- <artifactId>xmlParserAPIs</artifactId>
- </exclusion>
- <exclusion>
- <groupId>org.apache.neethi</groupId>
- <artifactId>neethi</artifactId>
- </exclusion>
- </exclusions>
- </dependency>
- <dependency>
- <groupId>org.apache.airavata</groupId>
- <artifactId>orchestrator-client</artifactId>
- <version>${project.version}</version>
- </dependency>
- <dependency>
- <groupId>org.apache.airavata</groupId>
- <artifactId>gfac-client</artifactId>
- <version>${project.version}</version>
- </dependency>
- <dependency>
- <groupId>org.apache.airavata</groupId>
- <artifactId>orchestrator-core</artifactId>
- <version>${project.version}</version>
- </dependency>
- <dependency>
- <groupId>org.apache.airavata</groupId>
- <artifactId>airavata-registry-cpi</artifactId>
- <version>${project.version}</version>
- </dependency>
- <dependency>
- <groupId>org.apache.airavata</groupId>
- <artifactId>airavata-jpa-registry</artifactId>
- <version>${project.version}</version>
- </dependency>
- <dependency>
- <groupId>org.apache.airavata</groupId>
- <artifactId>airavata-data-models</artifactId>
- <version>${project.version}</version>
- </dependency>
- <dependency>
- <groupId>org.apache.airavata</groupId>
- <artifactId>airavata-credential-store</artifactId>
- <version>${project.version}</version>
- </dependency>
- <dependency>
- <groupId>org.apache.airavata</groupId>
- <artifactId>gfac-impl</artifactId>
- <version>${project.version}</version>
- </dependency>
- <dependency>
- <groupId>org.apache.airavata</groupId>
- <artifactId>gfac-bes</artifactId>
- <version>${project.version}</version>
- </dependency>
- <dependency>
- <groupId>org.apache.airavata</groupId>
- <artifactId>gfac-core</artifactId>
- <version>${project.version}</version>
- </dependency>
- <dependency>
- <groupId>org.apache.airavata</groupId>
- <artifactId>gfac-service</artifactId>
- <version>${project.version}</version>
- </dependency>
- <!--<dependency> -->
- <!--<groupId>org.apache.airavata</groupId> -->
- <!--<artifactId>airavata-message-monitor</artifactId> -->
- <!--<version>${project.version}</version> -->
- <!--</dependency> -->
- <dependency>
- <groupId>org.apache.airavata</groupId>
- <artifactId>airavata-workflow-model-core</artifactId>
- <version>${project.version}</version>
- </dependency>
- <dependency>
- <groupId>org.apache.airavata</groupId>
- <artifactId>airavata-model-utils</artifactId>
- <version>${project.version}</version>
- </dependency>
- <dependency>
- <groupId>org.apache.airavata</groupId>
- <artifactId>airavata-api-server</artifactId>
- <version>${project.version}</version>
- </dependency>
- <!--dependency> <groupId>org.apache.airavata</groupId> <artifactId>apache-airavata-samples</artifactId>
- <type>zip</type> <version>${project.version}</version> </dependency -->
- <dependency>
- <groupId>org.bouncycastle</groupId>
- <artifactId>bcprov-jdk15on</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.openjpa</groupId>
- <artifactId>openjpa-all</artifactId>
- <version>2.2.0</version>
- </dependency>
-
- <dependency>
- <groupId>org.apache.shiro</groupId>
- <artifactId>shiro-core</artifactId>
- <version>1.2.1</version>
- </dependency>
- <dependency>
- <groupId>com.sun.jersey</groupId>
- <artifactId>jersey-client</artifactId>
- <version>${jersey.version}</version>
- </dependency>
- <!--dependency> <groupId>org.apache.airavata</groupId> <artifactId>airavata-common-utils</artifactId>
- <version>${project.version}</version> </dependency -->
- <dependency>
- <groupId>javax.servlet</groupId>
- <artifactId>javax.servlet-api</artifactId>
- <version>3.0.1</version>
- <scope>provided</scope>
- </dependency>
- <dependency>
- <groupId>org.apache.tomcat.embed</groupId>
- <artifactId>tomcat-embed-logging-juli</artifactId>
- <version>7.0.22</version>
- </dependency>
- <dependency>
- <groupId>org.apache.tomcat.embed</groupId>
- <artifactId>tomcat-embed-jasper</artifactId>
- <version>7.0.22</version>
- </dependency>
- <dependency>
- <groupId>com.sun.jersey</groupId>
- <artifactId>jersey-servlet</artifactId>
- <version>${jersey.version}</version>
- </dependency>
- <dependency>
- <groupId>com.sun.jersey</groupId>
- <artifactId>jersey-json</artifactId>
- <version>${jersey.version}</version>
- <exclusions>
- <exclusion>
- <groupId>stax</groupId>
- <artifactId>stax-api</artifactId>
- </exclusion>
- </exclusions>
-
- </dependency>
- <dependency>
- <groupId>com.sun.jersey.contribs</groupId>
- <artifactId>jersey-multipart</artifactId>
- <version>${jersey.version}</version>
- </dependency>
- <dependency>
- <groupId>com.sun.jersey</groupId>
- <artifactId>jersey-server</artifactId>
- <version>${jersey.version}</version>
- </dependency>
- <!--dependency> <groupId>com.sun.jersey</groupId> <artifactId>jersey-client</artifactId>
- <version>${jersey.version}</version> </dependency -->
- <dependency>
- <groupId>org.codehaus.jackson</groupId>
- <artifactId>jackson-mapper-asl</artifactId>
- <version>1.9.2</version>
- </dependency>
- <dependency>
- <groupId>org.codehaus.jackson</groupId>
- <artifactId>jackson-xc</artifactId>
- <version>1.9.2</version>
- </dependency>
- <dependency>
- <groupId>org.codehaus.jackson</groupId>
- <artifactId>jackson-jaxrs</artifactId>
- <version>1.9.2</version>
- </dependency>
- <dependency>
- <groupId>org.codehaus.jackson</groupId>
- <artifactId>jackson-core-asl</artifactId>
- <version>1.9.2</version>
- </dependency>
- <dependency>
- <groupId>xerces</groupId>
- <artifactId>xercesImpl</artifactId>
- <version>2.9.1</version>
- <exclusions>
- <exclusion>
- <groupId>xml-apis</groupId>
- <artifactId>xml-apis</artifactId>
- </exclusion>
- </exclusions>
- </dependency>
- <dependency>
- <groupId>com.ibm.icu</groupId>
- <artifactId>icu4j</artifactId>
- <version>3.4.4</version>
- </dependency>
- <dependency>
- <groupId>com.google.guava</groupId>
- <artifactId>guava</artifactId>
- <version>12.0</version>
- </dependency>
-
- <!-- Hadoop provider related dependencies -->
- <dependency>
- <groupId>org.apache.hadoop</groupId>
- <artifactId>hadoop-core</artifactId>
- <version>1.0.3</version>
- </dependency>
- <dependency>
- <groupId>org.apache.hadoop</groupId>
- <artifactId>hadoop-client</artifactId>
- <version>1.0.3</version>
- </dependency>
- <dependency>
- <groupId>org.apache.whirr</groupId>
- <artifactId>whirr-core</artifactId>
- <version>0.7.1</version>
- <exclusions>
- <exclusion>
- <groupId>org.bouncycastle</groupId>
- <artifactId>bcprov-jdk16</artifactId>
- </exclusion>
- <exclusion>
- <groupId>org.jclouds.driver</groupId>
- <artifactId>jclouds-bouncycastle</artifactId>
- </exclusion>
- </exclusions>
- </dependency>
- <dependency>
- <groupId>org.apache.whirr</groupId>
- <artifactId>whirr-hadoop</artifactId>
- <version>0.7.1</version>
- </dependency>
- <dependency>
- <groupId>org.hamcrest</groupId>
- <artifactId>hamcrest-all</artifactId>
- <version>1.1</version>
- </dependency>
- <dependency>
- <groupId>org.mockito</groupId>
- <artifactId>mockito-all</artifactId>
- <version>1.8.5</version>
- </dependency>
- <dependency>
- <groupId>commons-configuration</groupId>
- <artifactId>commons-configuration</artifactId>
- <version>1.7</version>
- </dependency>
- <dependency>
- <groupId>net.sf.jopt-simple</groupId>
- <artifactId>jopt-simple</artifactId>
- <version>3.2</version>
- </dependency>
- <dependency>
- <groupId>org.ebaysf.web</groupId>
- <artifactId>cors-filter</artifactId>
- <version>${ebay.cors.filter}</version>
- </dependency>
- <dependency>
- <groupId>com.jcraft</groupId>
- <artifactId>jsch</artifactId>
- <version>0.1.50</version>
- </dependency>
- <!-- dependency> <groupId>org.ogce</groupId> <artifactId>bcgss</artifactId>
- <version>146</version> </dependency> -->
- <dependency>
- <groupId>org.apache.xmlbeans</groupId>
- <artifactId>xmlbeans</artifactId>
- <version>${xmlbeans.version}</version>
- <exclusions>
- <exclusion>
- <groupId>stax</groupId>
- <artifactId>stax-api</artifactId>
- </exclusion>
- </exclusions>
- </dependency>
- <dependency>
- <groupId>org.apache.thrift</groupId>
- <artifactId>libthrift</artifactId>
- <version>0.9.1</version>
- </dependency>
- <dependency>
- <groupId>com.fasterxml.jackson.core</groupId>
- <artifactId>jackson-databind</artifactId>
- <version>2.0.0</version>
- </dependency>
- <dependency>
- <groupId>com.fasterxml.jackson.core</groupId>
- <artifactId>jackson-core</artifactId>
- <version>2.0.0</version>
- </dependency>
- <dependency>
- <groupId>com.fasterxml.jackson.core</groupId>
- <artifactId>jackson-annotations</artifactId>
- <version>2.0.0</version>
- </dependency>
- <!-- zookeeper dependencies -->
-
- <dependency>
- <groupId>org.apache.zookeeper</groupId>
- <artifactId>zookeeper</artifactId>
- <version>3.4.0</version>
- </dependency>
- <dependency>
- <groupId>commons-cli</groupId>
- <artifactId>commons-cli</artifactId>
- <version>1.2</version>
- </dependency>
-
- <dependency>
- <groupId>com.rabbitmq</groupId>
- <artifactId>amqp-client</artifactId>
- <version>${amqp.client.version}</version>
- </dependency>
- <dependency>
- <groupId>org.apache.curator</groupId>
- <artifactId>curator-framework</artifactId>
- <version>${curator.version}</version>
- </dependency>
-
- <!-- ======================== Sample =================== -->
- <dependency>
- <groupId>org.apache.airavata</groupId>
- <artifactId>airavata-client-samples</artifactId>
- <version>${project.version}</version>
- </dependency>
- </dependencies>
-
-
- <properties>
- <jersey.version>1.13</jersey.version>
- <grizzly.version>2.0.0-M3</grizzly.version>
- <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
- <archieve.name>apache-airavata-server</archieve.name>
- <airavata.dist.name>${archieve.name}-${project.version}</airavata.dist.name>
- <airavata.work.dir>${project.build.directory}/tests/${airavata.dist.name}</airavata.work.dir>
- <airavata.bin.zip>${project.build.directory}/${airavata.dist.name}-bin.zip</airavata.bin.zip>
- <airavata.bin.tar.gz>${project.build.directory}/${airavata.dist.name}-bin.tar.gz</airavata.bin.tar.gz>
- </properties>
-</project>
http://git-wip-us.apache.org/repos/asf/airavata/blob/8c4ea1f0/modules/distribution/server/src/main/assembly/bin-assembly.xml
----------------------------------------------------------------------
diff --git a/modules/distribution/server/src/main/assembly/bin-assembly.xml b/modules/distribution/server/src/main/assembly/bin-assembly.xml
deleted file mode 100644
index 8b88e92..0000000
--- a/modules/distribution/server/src/main/assembly/bin-assembly.xml
+++ /dev/null
@@ -1,189 +0,0 @@
-<!--Licensed to the Apache Software Foundation (ASF) under one or more contributor
- license agreements. See the NOTICE file distributed with this work for additional
- information regarding copyright ownership. The ASF licenses this file to
- you under the Apache License, Version 2.0 (theÏ "License"); you may not use
- this file except in compliance with the License. You may obtain a copy of
- the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required
- by applicable law or agreed to in writing, software distributed under the
- License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS
- OF ANY ~ KIND, either express or implied. See the License for the specific
- language governing permissions and limitations under the License. -->
-
-<!DOCTYPE assembly [
- <!ELEMENT assembly (id|includeBaseDirectory|baseDirectory|formats|fileSets|dependencySets)*>
- <!ELEMENT id (#PCDATA)>
- <!ELEMENT includeBaseDirectory (#PCDATA)>
- <!ELEMENT baseDirectory (#PCDATA)>
- <!ELEMENT formats (format)*>
- <!ELEMENT format (#PCDATA)>
- <!ELEMENT fileSets (fileSet)*>
- <!ELEMENT fileSet (directory|outputDirectory|fileMode|includes)*>
- <!ELEMENT directory (#PCDATA)>
- <!ELEMENT outputDirectory (#PCDATA)>
- <!ELEMENT includes (include)*>
- <!ELEMENT include (#PCDATA)>
- <!ELEMENT dependencySets (dependencySet)*>
- <!ELEMENT dependencySet (outputDirectory|outputFileNameMapping|includes)*>
- ]>
-<assembly>
- <id>bin</id>
- <includeBaseDirectory>true</includeBaseDirectory>
- <baseDirectory>${archieve.name}-${version}</baseDirectory>
- <formats>
- <format>tar.gz</format>
- <format>zip</format>
- </formats>
-
- <fileSets>
-
- <!-- ********************** copy release notes files ********************** -->
- <fileSet>
- <directory>../../../</directory>
- <outputDirectory>.</outputDirectory>
- <includes>
- <include>RELEASE_NOTES</include>
- </includes>
- </fileSet>
- <!-- ********************** copy licenses, readme etc. ********************** -->
- <fileSet>
- <directory>src/main/resources/</directory>
- <outputDirectory>.</outputDirectory>
- <includes>
- <include>LICENSE</include>
- <include>NOTICE</include>
- <include>README</include>
- <include>INSTALL</include>
- </includes>
- </fileSet>
-
- <!-- ********************** copy database scripts ********************** -->
- <fileSet>
- <directory>../../ws-messenger/messagebroker/src/main/resources/database_scripts
- </directory>
- <outputDirectory>bin/database_scripts
- </outputDirectory>
- <includes>
- <include>*sql*</include>
- </includes>
- </fileSet>
- <fileSet>
- <directory>../../ws-messenger/messagebox/src/main/resources/database_scripts
- </directory>
- <outputDirectory>bin/database_scripts
- </outputDirectory>
- <includes>
- <include>*sql*</include>
- </includes>
- </fileSet>
- <fileSet>
- <directory>../../registry/airavata-jpa-registry/src/main/resources
- </directory>
- <outputDirectory>bin/database_scripts
- </outputDirectory>
- <includes>
- <include>*sql*</include>
- </includes>
- </fileSet>
- <fileSet>
- <directory>../../app-catalog/app-catalog-data/src/main/resources
- </directory>
- <outputDirectory>bin/database_scripts
- </outputDirectory>
- <includes>
- <include>*sql*</include>
- </includes>
- </fileSet>
- <fileSet>
- <directory>src/main/resources/bin</directory>
- <outputDirectory>bin</outputDirectory>
- <fileMode>777</fileMode>
- <includes>
- <include>*.sh</include>
- <include>*.bat</include>
- <include>logo.txt</include>
- <include>startNetworkServer</include>
- </includes>
- </fileSet>
- <fileSet>
- <directory>src/main/resources/samples</directory>
- <outputDirectory>samples</outputDirectory>
- <fileMode>777</fileMode>
- <includes>
- <include>*.sh</include>
- <include>**/*.sh</include>
- </includes>
- </fileSet>
- <fileSet>
- <directory>${project.build.directory}/conf</directory>
- <outputDirectory>bin</outputDirectory>
- <includes>
- <include>airavata-server.properties</include>
- <include>zoo.cfg</include>
- <include>registry.properties</include>
- <include>log4j.properties</include>
- <include>host.xml</include>
- <include>persistence.xml</include>
- <include>provenance.sql</include>
- <include>gfac-config.xml</include>
- <include>PBSTemplate.xslt</include>
- <include>SLURMTemplate.xslt</include>
- <include>LSFTemplate.xslt</include>
- <include>UGETemplate.xslt</include>
- <include>gsissh.properties</include>
- </includes>
- </fileSet>
-
- <!-- ********************** Copy Axis2 startup scripts to stand alone server
- ********************** -->
- <fileSet>
- <directory>src/main/resources/axis2-standalone-bin</directory>
- <outputDirectory>bin</outputDirectory>
- <fileMode>777</fileMode>
- <includes>
- <include>*.sh</include>
- <include>*.bat</include>
- </includes>
- </fileSet>
-
- <fileSet>
- <directory>src/main/resources/conf</directory>
- <outputDirectory>bin</outputDirectory>
- <includes>
- <include>**/*</include>
- </includes>
- </fileSet>
-
- <!-- ********************** Copy samples ********************** -->
- <fileSet>
- <directory>${project.build.directory}/samples/applications
- </directory>
- <outputDirectory>samples</outputDirectory>
- <includes>
- <include>*.sh</include>
- <include>*.bat</include>
- </includes>
- </fileSet>
-
- </fileSets>
-
- <dependencySets>
- <dependencySet>
- <outputDirectory>lib</outputDirectory>
- <outputFileNameMapping>${artifact.artifactId}.${artifact.extension}</outputFileNameMapping>
- <includes>
- <include>org.apache.derby:derby:jar</include>
- <include>org.apache.derby:derbytools:jar</include>
- <include>org.apache.derby:derbynet:jar</include>
- <include>org.apache.derby:derbyclient:jar</include>
- </includes>
- </dependencySet>
- <dependencySet>
- <outputDirectory>lib</outputDirectory>
- <includes>
- <include>*:*:jar</include>
- </includes>
- </dependencySet>
-
- </dependencySets>
-
-</assembly>
http://git-wip-us.apache.org/repos/asf/airavata/blob/8c4ea1f0/modules/distribution/server/src/main/assembly/src-assembly.xml
----------------------------------------------------------------------
diff --git a/modules/distribution/server/src/main/assembly/src-assembly.xml b/modules/distribution/server/src/main/assembly/src-assembly.xml
deleted file mode 100644
index 6a093ed..0000000
--- a/modules/distribution/server/src/main/assembly/src-assembly.xml
+++ /dev/null
@@ -1,75 +0,0 @@
-<!--Licensed to the Apache Software Foundation (ASF) under one
- ~ or more contributor license agreements. See the NOTICE file
- ~ distributed with this work for additional information
- ~ regarding copyright ownership. The ASF licenses this file
- ~ to you under the Apache License, Version 2.0 (the
- ~ "License"); you may not use this file except in compliance
- ~ with the License. You may obtain a copy of the License at
- ~
- ~ http://www.apache.org/licenses/LICENSE-2.0
- ~
- ~ Unless required by applicable law or agreed to in writing,
- ~ software distributed under the License is distributed on an
- ~ "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- ~ KIND, either express or implied. See the License for the
- ~ specific language governing permissions and limitations
- ~ under the License.
- -->
-
-<assembly>
- <id>src</id>
- <includeBaseDirectory>true</includeBaseDirectory>
- <baseDirectory>${archieve.name}-${version}</baseDirectory>
- <formats>
- <format>tar.gz</format>
- <format>zip</format>
- </formats>
-
- <fileSets>
- <fileSet>
- <directory>../..</directory>
- <outputDirectory></outputDirectory>
- <includes>
- <include>NOTICE</include>
- <include>LICENSE</include>
- <include>README</include>
- <include>RELEASE_NOTES</include>
- <include>DISCLAIMER</include>
- <include>INSTALL</include>
- </includes>
- <filtered>true</filtered>
- </fileSet>
- <fileSet>
- <directory>../..</directory>
- <outputDirectory></outputDirectory>
- <useDefaultExcludes>true</useDefaultExcludes>
- <includes>
- <include>pom.xml</include>
- <include>modules/**</include>
- <include>samples/**</include>
- </includes>
-
- <excludes>
- <!-- Exclusions from org.apache.resources:apache-source-release-assembly-descriptor.
- Note that they assume that all sources are located under an "src" directory. This
- is not the case for Axis2, which doesn't use the standard Maven 2 conventions.
- Thus we may still encounter some issues here. -->
- <exclude>%regex[(?!((?!${project.build.directory}/)[^/]+/)*src/).*${project.build.directory}.*]</exclude>
- <exclude>%regex[(?!((?!${project.build.directory}/)[^/]+/)*src/)(.*/)?maven-eclipse\.xml]</exclude>
- <exclude>%regex[(?!((?!${project.build.directory}/)[^/]+/)*src/)(.*/)?\.project]</exclude>
- <exclude>%regex[(?!((?!${project.build.directory}/)[^/]+/)*src/)(.*/)?\.classpath]</exclude>
- <exclude>%regex[(?!((?!${project.build.directory}/)[^/]+/)*src/)(.*/)?[^/]*\.iws]</exclude>
- <exclude>%regex[(?!((?!${project.build.directory}/)[^/]+/)*src/)(.*/)?[^/]*\.ipr]</exclude>
- <exclude>%regex[(?!((?!${project.build.directory}/)[^/]+/)*src/)(.*/)?[^/]*\.iml]</exclude>
- <exclude>%regex[(?!((?!${project.build.directory}/)[^/]+/)*src/)(.*/)?\.settings(/.*)?]</exclude>
- <exclude>%regex[(?!((?!${project.build.directory}/)[^/]+/)*src/)(.*/)?\.externalToolBuilders(/.*)?]</exclude>
- <exclude>%regex[(?!((?!${project.build.directory}/)[^/]+/)*src/)(.*/)?\.deployables(/.*)?]</exclude>
- <exclude>%regex[(?!((?!${project.build.directory}/)[^/]+/)*src/)(.*/)?\.wtpmodules(/.*)?]</exclude>
- <exclude>%regex[(?!((?!${project.build.directory}/)[^/]+/)*src/)(.*/)?cobertura\.ser]</exclude>
- <exclude>%regex[(?!((?!${project.build.directory}/)[^/]+/)*src/)(.*/)?pom\.xml\.releaseBackup]</exclude>
- <exclude>%regex[(?!((?!${project.build.directory}/)[^/]+/)*src/)(.*/)?release\.properties]</exclude>
- </excludes>
-
- </fileSet>
- </fileSets>
-</assembly>
http://git-wip-us.apache.org/repos/asf/airavata/blob/8c4ea1f0/modules/distribution/server/src/main/resources/INSTALL
----------------------------------------------------------------------
diff --git a/modules/distribution/server/src/main/resources/INSTALL b/modules/distribution/server/src/main/resources/INSTALL
deleted file mode 100644
index 53d0550..0000000
--- a/modules/distribution/server/src/main/resources/INSTALL
+++ /dev/null
@@ -1,30 +0,0 @@
-Installing Apache Airavata 0.14
--------------------------------
-
-Prerequisites
--------------
-Java 1.5 or later
-Maven (tested on v 3.0.2)
-
-Build Apache Airavata from Source
----------------------------------
-* Unzip/untar the source file or clone from git.
-* cd to project folder and type
- $ mvn clean install
- Note: in order to skip tests use the command
- $ mvn clean install -Dmaven.test.skip=true
-* Alternatively, all compressed binary distributions can be found at <PROJECT DIR>/modules/distribution/release/target/release-artifacts
-
-Running Tests
--------------
-* Unit tests & integrations tests will run while Apache Airavata is built from source (without "-Dmaven.test.skip=true").
-* To run the test samples
- - You can find the binary distributions at <PROJECT DIR>/modules/distribution/release/target/release-artifacts or from
- the Apache Airavata download site.
- - Extract the binary distributions and once the binary is unzipped, instructions to run the tests should be followed
- from README files found within.
-
-Tutorials
-----------
-The airavata website has instructions for basic tutorials:
-* Describing and executing applications using Airavata - follow "XBAYA Quick-Start Tutorial" tutorial at https://cwiki.apache.org/confluence/display/AIRAVATA/XBAYA+Quick-Start+Tutorial
\ No newline at end of file