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Posted to jira@arrow.apache.org by "Fabio Machado (Jira)" <ji...@apache.org> on 2021/11/29 17:06:00 UTC
[jira] [Updated] (ARROW-14908) [R] join followed by a summarize and collect crashes R
[ https://issues.apache.org/jira/browse/ARROW-14908?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Fabio Machado updated ARROW-14908:
----------------------------------
Description:
{code:java}
library(tidyverse)
library(arrow)
car_info <- rownames_to_column(mtcars, "car_info")
cars_arrow_table <- arrow_table(car_info)
other_mtcars_data <- select(car_info, 1) %>%
mutate(main_color = sample( c("red", "blue", "white", "black"), size = n(), replace = TRUE)) %>%
arrow::arrow_table()
temp <- tempdir()
par_temp <- paste0(temp, "\\parquet")
car_info %>% arrow::write_dataset(par_temp)
cars_arrow <- arrow::open_dataset(par_temp)
# using arrow tables works ------------------------------------------------------
cars_arrow_table %>% left_join(other_mtcars_data) %>% count(main_color) %>% collect()
# using open dataset crashes R ------------------------------------------------------------------
other_mtcars_data %>%
left_join(cars_arrow) %>%
count(main_color) %>%
collect()
#other variation also crash
cars_arrow %>%
left_join(other_mtcars_data) %>%
count(main_color) %>%
collect()
cars_arrow %>%
left_join(other_mtcars_data) %>%
group_by(main_color) %>%
summarise(n = n()) %>%
collect()
#compute also crashes
cars_arrow %>%
left_join(other_mtcars_data) %>%
count(main_color) %>%
compute()
# workaround with duckdb ------------------------------------------------------
##this works
cars_duck <- to_duckdb(cars_arrow, auto_disconnect = TRUE)
other_cars_duck <- to_duckdb(other_mtcars_data, auto_disconnect = TRUE)
cars_duck %>%
left_join(other_cars_duck) %>%
count(main_color) %>%
collect()
##this doesn't (don't know if expected to work actually)
cars_arrow %>%
left_join(other_mtcars_data) %>%
to_duckdb() {code}
was:
{code:java}
library(tidyverse)
library(arrow)
car_info <- rownames_to_column(mtcars, "car_info")
cars_arrow_table <- arrow_table(car_info)
other_mtcars_data <-
select(car_info, 1) %>%
mutate(main_color = sample( c("red", "blue", "white", "black"), size = n(), replace = TRUE)) %>%
arrow::arrow_table()
temp <- tempdir()
par_temp <- paste0(temp, "\\parquet")
car_info %>% arrow::write_dataset(par_temp)
cars_arrow <- arrow::open_dataset(par_temp)
# using arrow tables works ------------------------------------------------------
cars_arrow_table %>% left_join(other_mtcars_data) %>% count(main_color) %>% collect()
# using open dataset crashes R ------------------------------------------------------------------
#crashes RStudio
other_mtcars_data %>%
left_join(cars_arrow) %>%
count(main_color) %>%
collect()
#other variation also crash RStudio
cars_arrow %>%
left_join(other_mtcars_data) %>%
count(main_color) %>%
collect()
cars_arrow %>%
left_join(other_mtcars_data) %>%
group_by(main_color) %>%
summarise(n = n()) %>%
collect()
#compute also crashes
cars_arrow %>%
left_join(other_mtcars_data) %>%
count(main_color) %>%
compute()
# workaround with duckdb ------------------------------------------------------
##this works
cars_duck <- to_duckdb(cars_arrow, auto_disconnect = TRUE)
other_cars_duck <- to_duckdb(other_mtcars_data, auto_disconnect = TRUE)
cars_duck %>%
left_join(other_cars_duck) %>%
count(main_color) %>%
collect()
##this doesn't (don't know if expected to work actually)
cars_arrow %>%
left_join(other_mtcars_data) %>%
to_duckdb() {code}
> [R] join followed by a summarize and collect crashes R
> ------------------------------------------------------
>
> Key: ARROW-14908
> URL: https://issues.apache.org/jira/browse/ARROW-14908
> Project: Apache Arrow
> Issue Type: Bug
> Components: R
> Affects Versions: 6.0.0
> Environment: R version 4.0.4
> Reporter: Fabio Machado
> Priority: Critical
>
> {code:java}
> library(tidyverse)
> library(arrow)
> car_info <- rownames_to_column(mtcars, "car_info")
> cars_arrow_table <- arrow_table(car_info)
> other_mtcars_data <- select(car_info, 1) %>%
> mutate(main_color = sample( c("red", "blue", "white", "black"), size = n(), replace = TRUE)) %>%
> arrow::arrow_table()
> temp <- tempdir()
> par_temp <- paste0(temp, "\\parquet")
> car_info %>% arrow::write_dataset(par_temp)
> cars_arrow <- arrow::open_dataset(par_temp)
> # using arrow tables works ------------------------------------------------------
> cars_arrow_table %>% left_join(other_mtcars_data) %>% count(main_color) %>% collect()
> # using open dataset crashes R ------------------------------------------------------------------
> other_mtcars_data %>%
> left_join(cars_arrow) %>%
> count(main_color) %>%
> collect()
> #other variation also crash
> cars_arrow %>%
> left_join(other_mtcars_data) %>%
> count(main_color) %>%
> collect()
> cars_arrow %>%
> left_join(other_mtcars_data) %>%
> group_by(main_color) %>%
> summarise(n = n()) %>%
> collect()
> #compute also crashes
> cars_arrow %>%
> left_join(other_mtcars_data) %>%
> count(main_color) %>%
> compute()
> # workaround with duckdb ------------------------------------------------------
> ##this works
> cars_duck <- to_duckdb(cars_arrow, auto_disconnect = TRUE)
> other_cars_duck <- to_duckdb(other_mtcars_data, auto_disconnect = TRUE)
>
> cars_duck %>%
> left_join(other_cars_duck) %>%
> count(main_color) %>%
> collect()
> ##this doesn't (don't know if expected to work actually)
> cars_arrow %>%
> left_join(other_mtcars_data) %>%
> to_duckdb() {code}
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