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Posted to commits@airavata.apache.org by sa...@apache.org on 2013/01/25 16:49:35 UTC

svn commit: r1438560 [3/5] - in /airavata/trunk: ./ modules/distribution/airavata-client/src/main/assembly/ modules/distribution/airavata-client/src/main/resources/ modules/distribution/airavata-server/src/main/assembly/ modules/distribution/airavata-s...

Added: airavata/trunk/modules/distribution/airavata-server/src/main/resources/war/NOTICE
URL: http://svn.apache.org/viewvc/airavata/trunk/modules/distribution/airavata-server/src/main/resources/war/NOTICE?rev=1438560&view=auto
==============================================================================
--- airavata/trunk/modules/distribution/airavata-server/src/main/resources/war/NOTICE (added)
+++ airavata/trunk/modules/distribution/airavata-server/src/main/resources/war/NOTICE Fri Jan 25 15:49:35 2013
@@ -0,0 +1,163 @@
+Apache Airavata
+Copyright 2012 The Apache Software Foundation
+
+This product includes software developed at
+The Apache Software Foundation (http://www.apache.org/).
+
+===============================================================================
+Apache Xerces Java Notice:
+
+   Portions of this software were originally based on the following:
+     - software copyright (c) 1999, IBM Corporation., http://www.ibm.com.
+     - software copyright (c) 1999, Sun Microsystems., http://www.sun.com.
+     - voluntary contributions made by Paul Eng on behalf of the
+       Apache Software Foundation that were originally developed at iClick, Inc.,
+       software copyright (c) 1999.
+
+================================================================================
+Apache XmlBeans Notice: 
+
+   Portions of this software were originally based on the following:
+     - software copyright (c) 2000-2003, BEA Systems, <http://www.bea.com/>.
+
+   Aside from contributions to the Apache XMLBeans project, this
+   software also includes:
+
+    - one or more source files from the Apache Xerces-J and Apache Axis
+      products, Copyright (c) 1999-2003 Apache Software Foundation
+
+    - W3C XML Schema documents Copyright 2001-2003 (c) World Wide Web
+      Consortium (Massachusetts Institute of Technology, European Research
+      Consortium for Informatics and Mathematics, Keio University)
+
+    - resolver.jar from Apache Xml Commons project,
+      Copyright (c) 2001-2003 Apache Software Foundation
+
+    - Piccolo XML Parser for Java from http://piccolo.sourceforge.net/,
+      Copyright 2002 Yuval Oren under the terms of the Apache Software License 2.0
+
+    - JSR-173 Streaming API for XML from http://sourceforge.net/projects/xmlpullparser/,
+      Copyright 2005 BEA under the terms of the Apache Software License 2.0
+      
+=========================================================================================
+Apache Axis2 Notice: (axis2-*, mex-1.5.1-impl)
+
+Portions Copyright 2006 International Business Machines Corp.
+Portions Copyright 2005-2007 WSO2, Inc.
+
+This product also includes schemas and specification developed by:
+- the W3C consortium (http://www.w3c.org)
+
+This product also includes WS-* schemas developed by International
+Business Machines Corporation, Microsoft Corporation, BEA Systems, 
+TIBCO Software, SAP AG, Sonic Software, and VeriSign
+
+This product also includes a WSDL developed by salesforce.com
+- Copyright 1999-2006 salesforce.com, inc.
+Portions of the included xmlbeans library were originally based on the following:
+- software copyright (c) 2000-2003, BEA Systems, <http://www.bea.com/>.
+
+====================================================================================
+Apache Derby Notice:
+
+Portions of Derby were originally developed by
+International Business Machines Corporation and are
+licensed to the Apache Software Foundation under the
+"Software Grant and Corporate Contribution License Agreement",
+informally known as the "Derby CLA".
+The following copyright notice(s) were affixed to portions of the code
+with which this file is now or was at one time distributed
+and are placed here unaltered.
+
+(C) Copyright 1997,2004 International Business Machines Corporation.  All rights reserved.
+
+(C) Copyright IBM Corp. 2003. 
+
+=======================
+
+The portion of the functionTests under 'nist' was originally 
+developed by the National Institute of Standards and Technology (NIST), 
+an agency of the United States Department of Commerce, and adapted by
+International Business Machines Corporation in accordance with the NIST
+Software Acknowledgment and Redistribution document at
+http://www.itl.nist.gov/div897/ctg/sql_form.htm
+
+========================
+
+The JDBC apis for small devices and JDBC3 (under java/stubs/jsr169 and
+java/stubs/jdbc3) were produced by trimming sources supplied by the
+Apache Harmony project. In addition, the Harmony SerialBlob and
+SerialClob implementations are used. The following notice covers the Harmony sources:
+
+Portions of Harmony were originally developed by
+Intel Corporation and are licensed to the Apache Software
+Foundation under the "Software Grant and Corporate Contribution
+License Agreement", informally known as the "Intel Harmony CLA".
+
+=============================================================================
+Apache Woden Notice:
+
+   This product also includes software developed by :
+   
+     - IBM Corporation (http://www.ibm.com),
+         WSDL4J was the initial code contribution for the Apache Woden
+         project and some of the WSDL4J design and code has been reused.
+     - The W3C Consortium (http://www.w3c.org),
+         Common W3C XML Schema and DTD files are packaged with Apache Woden.
+
+   Please read the different LICENSE files present in the root directory of
+   this distribution.
+
+=========================================================================
+Woodstox Notice: 
+
+This product includes software developed by the Woodstox Project 
+(http://woodstox.codehaus.org/)
+
+This product currently only contains code developed by authors
+of specific components, as identified by the source code files.
+
+Since product implements StAX API, it has dependencies to StAX API
+classes.
+
+For additional credits (generally to people who reported problems)
+see CREDITS file.
+
+===========================================================================
+Apache xml-commons xml-apis Notice:
+
+   Portions of this software were originally based on the following:
+     - software copyright (c) 1999, IBM Corporation., http://www.ibm.com.
+     - software copyright (c) 1999, Sun Microsystems., http://www.sun.com.
+     - software copyright (c) 2000 World Wide Web Consortium, http://www.w3.org
+
+================================================================================================
+Apache  Xalan Notice: 
+
+Portions of this software was originally based on the following:
+     - software copyright (c) 1999-2002, Lotus Development Corporation., http://www.lotus.com.
+     - software copyright (c) 2001-2002, Sun Microsystems., http://www.sun.com.
+     - software copyright (c) 2003, IBM Corporation., http://www.ibm.com.
+     - voluntary contributions made by Ovidiu Predescu (ovidiu@cup.hp.com) on behalf of the 
+       Apache Software Foundation and was originally developed at Hewlett Packard Company. 
+================================================================================================
+Apache  OpenJPA Notice: 
+
+OpenJPA includes software developed by the SERP project
+Copyright (c) 2002-2006, A. Abram White. All rights reserved.
+
+OpenJPA includes the persistence and orm schemas from the JPA specifications.
+Copyright 2005-2009 Sun Microsystems, Inc. All rights reserved.
+OpenJPA elects to include this software in this distribution under the
+CDDL license.  You can obtain a copy of the License at:
+    https://glassfish.dev.java.net/public/CDDL+GPL.html
+The source code is available at:
+    https://glassfish.dev.java.net/source/browse/glassfish/
+
+OpenJPA includes software written by Miroslav Nachev
+OpenJPA uses test code written by Charles Tillman.
+================================================================================================
+Apache XmlSchema Notice:
+
+Portions Copyright 2006 International Business Machines Corp.
+================================================================================================
\ No newline at end of file

Added: airavata/trunk/modules/distribution/airavata-server/src/main/resources/war/README
URL: http://svn.apache.org/viewvc/airavata/trunk/modules/distribution/airavata-server/src/main/resources/war/README?rev=1438560&view=auto
==============================================================================
--- airavata/trunk/modules/distribution/airavata-server/src/main/resources/war/README (added)
+++ airavata/trunk/modules/distribution/airavata-server/src/main/resources/war/README Fri Jan 25 15:49:35 2013
@@ -0,0 +1,92 @@
+Apache Airavata - README.txt
+Licensed under Apache License 2.0 - http://www.apache.org/licenses/LICENSE-2.0
+--------------------------------------------------------------------------------
+
+About
+=====
+Apache Airavata, a software framework to executing and managing computational jobs on 
+distributed computing resources including local clusters, supercomputers, national grids, 
+academic and commercial clouds. Airavata can be used as individual components or 
+as an integrated solution to build science gateways or general-purpose distributed 
+application and workflow management systems. Users can use Airavata back end services 
+and build gadgets to deploy in open social containers such as Apache Rave and modify them 
+to suit their needs. Airavata builds on general concepts of service oriented computing, 
+distributed messaging, and workflow composition and orchestration.
+
+Release Notes
+=============
+0.6 is the fifth release of Airavata (skipped 0.1-INCUBATNG). This release focuses on providing a REST service interface for Airavata Registry. For detailed tasks list, please see RELEASE_NOTES.
+
+Building from source
+====================
+For brief installation instructions, see INSTALL
+For detailed installation and further instructions refer http://airavata.apache.org/ - Documentation section in left hand panel. Step by step with proper documentation are provided.
+
+Known Issues in This Release
+============================
+This is the base release and is focused on a good foundation and less on features. This 
+version is not recommended for production usage.
+
+Airavata Binary Distribution Directory Structure
+================================================
+
+    AIRAVATA_HOME
+		├── bin
+		│   ├── database_scripts <dir>
+		│   ├── airavata-server.bat
+		│   ├── airavata-server.properties
+		│   ├── airavata-server.sh
+		│   ├── authenticators.xml
+		│   ├── axis2.xml
+		│   ├── derby.sh
+		│   ├── host.xml
+		│   ├── log4j.properties
+		│   ├── logo.txt
+		│   ├── setenv.bat
+		│   ├── setenv.sh
+		│   └── startNetworkServer
+		├── lib <dir>
+		├── repository
+		│   ├── modules 
+		│   └── services
+		├── samples
+		│   ├── workflows <dir>
+		│   ├── echo_out.sh
+		│   └── echo.sh
+		├── INSTALL
+		├── LICENSE
+		├── NOTICE
+		└── README
+
+
+How to test and run samples
+===========================
+* If you built Airavata from source, and if you see "BUILD SUCCESS", then the test cases should have passes.
+* The test cases are beyond unit level, they startup embedded services and run through basic workflow use cases.
+* To walk through Airavata features, follow "Airavata in Five Minutes" tutorial at http://airavata.apache.org/documentation/system/airavata-in-5-minutes.html
+* For intermediate level Airavata features, follow "Airavata in Ten Minutes" tutorial at http://airavata.apache.org/documentation/system/airavata-in-10-minutes.html 
+* For advanced use cases, please contact mailing lists - http://airavata.apache.org/community/mailing-lists.html
+
+Description of Directory Structure
+==================================
+    - bin
+      This contains all the configuration files & the executable scripts to run the Airavata Server (Axis2 server 
+      with Airavata services which include messageBroker and messageBox with GFac Axis2 services), & a standalone Apache Derby server.
+
+    - bin - database_scripts
+      Contains the database scripts which are used to create tables for messagebox and messagebroker services
+
+    - samples
+      This contains sample workflow to try out & sample application scripts.
+
+    - lib
+      This contains all the libraries required to run the airavata server and/or derby server.
+
+    - repository - services
+      Contains deployed services in Axis2 runtime.
+
+    - README
+      This document.
+
+    - INSTALL
+          This document will contain information on installing Apache-Airavata.

Modified: airavata/trunk/modules/distribution/xbaya-gui/pom.xml
URL: http://svn.apache.org/viewvc/airavata/trunk/modules/distribution/xbaya-gui/pom.xml?rev=1438560&r1=1438559&r2=1438560&view=diff
==============================================================================
--- airavata/trunk/modules/distribution/xbaya-gui/pom.xml (original)
+++ airavata/trunk/modules/distribution/xbaya-gui/pom.xml Fri Jan 25 15:49:35 2013
@@ -111,7 +111,9 @@
                                 <copy todir="${jnlp.direcotry}/lib">
                                     <fileset dir="${xbaya.directory}/lib"/>
                                 </copy>
-                                <copy file="${project.basedir}/src/main/resources/xbaya.jnlp" todir="${jnlp.direcotry}"/>
+								<copy todir="${jnlp.direcotry}">
+                                    <fileset dir="${project.basedir}/src/main/resources/jnlp"/>
+                                </copy>
                                 <copy file="${project.basedir}/src/main/resources/airavata-logo.gif" todir="${jnlp.direcotry}"/>
                             </target>
                         </configuration>

Modified: airavata/trunk/modules/distribution/xbaya-gui/src/main/assembly/bin-assembly.xml
URL: http://svn.apache.org/viewvc/airavata/trunk/modules/distribution/xbaya-gui/src/main/assembly/bin-assembly.xml?rev=1438560&r1=1438559&r2=1438560&view=diff
==============================================================================
--- airavata/trunk/modules/distribution/xbaya-gui/src/main/assembly/bin-assembly.xml (original)
+++ airavata/trunk/modules/distribution/xbaya-gui/src/main/assembly/bin-assembly.xml Fri Jan 25 15:49:35 2013
@@ -33,15 +33,24 @@
 		<format>tar.gz</format>
 		<format>zip</format>
 	</formats>
-
 	<fileSets>
-		<!-- ********************** copy binary licenses ********************** -->
+		<!-- ********************** copy release notes files ********************** -->
+		<fileSet>
+			<directory>../../../</directory>
+			<outputDirectory>.</outputDirectory>
+			<includes>
+				<include>RELEASE_NOTES</include>
+			</includes>
+		</fileSet>
+		<!-- ********************** copy licenses, readme etc. ********************** -->
 		<fileSet>
 			<directory>src/main/resources/</directory>
 			<outputDirectory>.</outputDirectory>
 			<includes>
 				<include>LICENSE</include>
 				<include>NOTICE</include>
+				<include>README</include>
+				<include>INSTALL</include>
 			</includes>
 		</fileSet>
 		<fileSet>

Added: airavata/trunk/modules/distribution/xbaya-gui/src/main/resources/INSTALL
URL: http://svn.apache.org/viewvc/airavata/trunk/modules/distribution/xbaya-gui/src/main/resources/INSTALL?rev=1438560&view=auto
==============================================================================
--- airavata/trunk/modules/distribution/xbaya-gui/src/main/resources/INSTALL (added)
+++ airavata/trunk/modules/distribution/xbaya-gui/src/main/resources/INSTALL Fri Jan 25 15:49:35 2013
@@ -0,0 +1,27 @@
+Installing  Apache Airavata XBaya 0.6
+-------------------------------------
+
+Prerequisites
+-------------
+Java 1.5 or later
+Maven (tested on v 3.0.2)
+
+Build Apache Airavata XBaya from Source
+---------------------------------
+* Unzip/untar the source file or check out from svn.
+* cd to project folder and type
+	$ mvn clean install
+	Note: in order to skip tests use the command
+			$ mvn clean install -Dmaven.test.skip=true
+* The compressed binary distribution is created at <PROJECT DIR>/modules/distribution/xbaya-gui/target/apache-airavata-xbaya-gui-<airavata-version>-bin.zip
+
+Running Tests
+-------------
+Once the binary is unzipped, instructions to run the tests should be followed from README
+
+Tutorials 
+----------
+The airavata website has instructions for basic tutorials:
+* For basic understanding of how Airavata works - http://airavata.apache.org/documentation/system/airavata-in-5-minutes.html
+* Describing and executing applications using Airavata - http://airavata.apache.org/documentation/system/airavata-in-10-minutes.html
+* Advanced tutorial to provide understanding of how to run sample workflows distributed with Airavata - http://airavata.apache.org/documentation/system/advanced-workflow-samples.html

Added: airavata/trunk/modules/distribution/xbaya-gui/src/main/resources/README
URL: http://svn.apache.org/viewvc/airavata/trunk/modules/distribution/xbaya-gui/src/main/resources/README?rev=1438560&view=auto
==============================================================================
--- airavata/trunk/modules/distribution/xbaya-gui/src/main/resources/README (added)
+++ airavata/trunk/modules/distribution/xbaya-gui/src/main/resources/README Fri Jan 25 15:49:35 2013
@@ -0,0 +1,75 @@
+Apache Airavata - README.txt
+Licensed under Apache License 2.0 - http://www.apache.org/licenses/LICENSE-2.0
+--------------------------------------------------------------------------------
+
+About
+=====
+Apache Airavata, a software framework to executing and managing computational jobs on 
+distributed computing resources including local clusters, supercomputers, national grids, 
+academic and commercial clouds. Airavata can be used as individual components or 
+as an integrated solution to build science gateways or general-purpose distributed 
+application and workflow management systems. Users can use Airavata back end services 
+and build gadgets to deploy in open social containers such as Apache Rave and modify them 
+to suit their needs. Airavata builds on general concepts of service oriented computing, 
+distributed messaging, and workflow composition and orchestration.
+
+Release Notes
+=============
+0.6 is the fifth release of Airavata (skipped 0.1-INCUBATNG). This release focuses on providing a REST service interface for Airavata Registry. For detailed tasks list, please see RELEASE_NOTES.
+
+Building from source
+====================
+For brief installation instructions, see INSTALL
+For detailed installation and further instructions refer http://airavata.apache.org/ - Documentation section in left hand panel. Step by step with proper documentation are provided.
+
+Known Issues in This Release
+============================
+This is the base release and is focused on a good foundation and less on features. This 
+version is not recommended for production usage.
+
+Airavata XBaya Distribution Directory Structure
+================================================
+
+    AIRAVATA_XBAYA
+		├── bin
+		│   ├── airavata-client.properties
+		│   ├── log4j.properties
+		│   ├── setenv.bat
+		│   ├── setenv.sh
+		│   ├── xbaya-gui.bat
+		│   └── xbaya-gui.sh
+		├── lib
+		├── samples
+		├── INSTALL
+		├── LICENSE
+		├── NOTICE
+		└── README
+
+
+
+
+How to test and run samples
+===========================
+* If you built Airavata from source, and if you see "BUILD SUCCESS", then the test cases should have passes.
+* The test cases are beyond unit level, they startup embedded services and run through basic workflow use cases.
+* To walk through Airavata features, follow "Airavata in Five Minutes" tutorial at http://airavata.apache.org/documentation/system/airavata-in-5-minutes.html
+* For intermediate level Airavata features, follow "Airavata in Ten Minutes" tutorial at http://airavata.apache.org/documentation/system/airavata-in-10-minutes.html 
+* For advanced use cases, please contact mailing lists - http://airavata.apache.org/community/mailing-lists.html
+
+Description of Directory Structure
+==================================
+
+    - bin
+      This contains the configuration files for Airavata XBaya & the scripts to run XBaya GUI Application.
+
+    - samples
+      This contains sample scripts to define the sample descriptor in http://airavata.apache.org/documentation/system/airavata-in-10-minutes.html
+
+    - lib
+      This contains all the libraries required to run the client side code with the jars required to run XBaya GUI.
+
+    - README
+      This document.
+
+    - INSTALL
+          This document will contain information on installing Apache-Airavata XBaya.

Added: airavata/trunk/modules/distribution/xbaya-gui/src/main/resources/jnlp/INSTALL
URL: http://svn.apache.org/viewvc/airavata/trunk/modules/distribution/xbaya-gui/src/main/resources/jnlp/INSTALL?rev=1438560&view=auto
==============================================================================
--- airavata/trunk/modules/distribution/xbaya-gui/src/main/resources/jnlp/INSTALL (added)
+++ airavata/trunk/modules/distribution/xbaya-gui/src/main/resources/jnlp/INSTALL Fri Jan 25 15:49:35 2013
@@ -0,0 +1,36 @@
+Installing  Apache Airavata XBaya 0.6
+-------------------------------------
+
+Prerequisites
+-------------
+Java 1.5 or later
+Maven (tested on v 3.0.2)
+
+Build Apache Airavata XBaya JNLP from Source
+--------------------------------------------
+* Unzip/untar the source file or check out from svn.
+* cd to project folder and type
+	$ mvn clean install
+	Note: in order to skip tests use the command
+			$ mvn clean install -Dmaven.test.skip=true
+* The compressed binary distribution is created at <PROJECT DIR>/modules/distribution/xbaya-gui/target/apache-airavata-xbaya-gui-<airavata-version>-jnlp.zip
+
+Installing the JNLP Distribution
+--------------------------------
+* Extract the Apache Airavata XBaya JNLP distribution to a web accessible location
+* Update the the xbaya.jnlp file "codebase" with the web access location of the jnlp
+      eg: <jnlp ... codebase="http://example-server.com/airavata/xbaya/" ...>
+           ...
+           ...
+          </jnlp> 
+
+Running Tests
+-------------
+Once the binary is unzipped, instructions to run the tests should be followed from README
+
+Tutorials 
+----------
+The airavata website has instructions for basic tutorials:
+* For basic understanding of how Airavata works - http://airavata.apache.org/documentation/system/airavata-in-5-minutes.html
+* Describing and executing applications using Airavata - http://airavata.apache.org/documentation/system/airavata-in-10-minutes.html
+* Advanced tutorial to provide understanding of how to run sample workflows distributed with Airavata - http://airavata.apache.org/documentation/system/advanced-workflow-samples.html