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Posted to builds@beam.apache.org by Apache Jenkins Server <je...@builds.apache.org> on 2020/04/17 19:17:55 UTC

Build failed in Jenkins: beam_PerformanceTests_WordCountIT_Py35 #1338

See <https://builds.apache.org/job/beam_PerformanceTests_WordCountIT_Py35/1338/display/redirect?page=changes>

Changes:

[ehudm] [BEAM-9737] Don't use docker create option -u

[github] [BEAM-9674] Don't specify selected fields when fetching BigQuery table

[github] [BEAM-9650] Cleanup documentation on side inputs patterns (#11415)


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[...truncated 482.63 KB...]
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INFO:apache_beam.runners.dataflow.internal.apiclient:Create job: <Job
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INFO:apache_beam.runners.dataflow.internal.apiclient:Created job with id: [2020-04-17_11_59_06-16952517834608177752]
INFO:apache_beam.runners.dataflow.internal.apiclient:To access the Dataflow monitoring console, please navigate to https://console.cloud.google.com/dataflow/jobs/us-central1/2020-04-17_11_59_06-16952517834608177752?project=apache-beam-testing
INFO:apache_beam.runners.dataflow.dataflow_runner:Job 2020-04-17_11_59_06-16952517834608177752 is in state JOB_STATE_RUNNING
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:11.251Z: JOB_MESSAGE_DETAILED: Checking permissions granted to controller Service Account.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:11.937Z: JOB_MESSAGE_BASIC: Worker configuration: n1-standard-1 in us-central1-c.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:12.720Z: JOB_MESSAGE_DETAILED: Expanding CoGroupByKey operations into optimizable parts.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:12.759Z: JOB_MESSAGE_DEBUG: Combiner lifting skipped for step write/Write/WriteImpl/GroupByKey: GroupByKey not followed by a combiner.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:12.802Z: JOB_MESSAGE_DEBUG: Combiner lifting skipped for step group: GroupByKey not followed by a combiner.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:12.845Z: JOB_MESSAGE_DETAILED: Expanding GroupByKey operations into optimizable parts.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:12.884Z: JOB_MESSAGE_DETAILED: Lifting ValueCombiningMappingFns into MergeBucketsMappingFns
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:12.993Z: JOB_MESSAGE_DEBUG: Annotating graph with Autotuner information.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:13.042Z: JOB_MESSAGE_DETAILED: Fusing adjacent ParDo, Read, Write, and Flatten operations
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:13.078Z: JOB_MESSAGE_DETAILED: Fusing consumer split into read/Read
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:13.113Z: JOB_MESSAGE_DETAILED: Fusing consumer pair_with_one into split
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:13.154Z: JOB_MESSAGE_DETAILED: Fusing consumer group/Reify into pair_with_one
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:13.191Z: JOB_MESSAGE_DETAILED: Fusing consumer group/Write into group/Reify
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:13.233Z: JOB_MESSAGE_DETAILED: Fusing consumer group/GroupByWindow into group/Read
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:13.272Z: JOB_MESSAGE_DETAILED: Fusing consumer count into group/GroupByWindow
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:13.311Z: JOB_MESSAGE_DETAILED: Fusing consumer format into count
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:13.353Z: JOB_MESSAGE_DETAILED: Fusing consumer write/Write/WriteImpl/WriteBundles/WriteBundles into format
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:13.391Z: JOB_MESSAGE_DETAILED: Fusing consumer write/Write/WriteImpl/Pair into write/Write/WriteImpl/WriteBundles/WriteBundles
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:13.426Z: JOB_MESSAGE_DETAILED: Fusing consumer write/Write/WriteImpl/WindowInto(WindowIntoFn) into write/Write/WriteImpl/Pair
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:13.457Z: JOB_MESSAGE_DETAILED: Fusing consumer write/Write/WriteImpl/GroupByKey/Reify into write/Write/WriteImpl/WindowInto(WindowIntoFn)
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:13.493Z: JOB_MESSAGE_DETAILED: Fusing consumer write/Write/WriteImpl/GroupByKey/Write into write/Write/WriteImpl/GroupByKey/Reify
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:13.526Z: JOB_MESSAGE_DETAILED: Fusing consumer write/Write/WriteImpl/GroupByKey/GroupByWindow into write/Write/WriteImpl/GroupByKey/Read
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:13.560Z: JOB_MESSAGE_DETAILED: Fusing consumer write/Write/WriteImpl/Extract into write/Write/WriteImpl/GroupByKey/GroupByWindow
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:13.595Z: JOB_MESSAGE_DETAILED: Fusing consumer write/Write/WriteImpl/InitializeWrite into write/Write/WriteImpl/DoOnce/Read
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:13.623Z: JOB_MESSAGE_DEBUG: Workflow config is missing a default resource spec.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:13.663Z: JOB_MESSAGE_DEBUG: Adding StepResource setup and teardown to workflow graph.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:13.688Z: JOB_MESSAGE_DEBUG: Adding workflow start and stop steps.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:13.722Z: JOB_MESSAGE_DEBUG: Assigning stage ids.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:14.071Z: JOB_MESSAGE_DEBUG: Executing wait step start26
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:14.156Z: JOB_MESSAGE_BASIC: Executing operation write/Write/WriteImpl/DoOnce/Read+write/Write/WriteImpl/InitializeWrite
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:14.191Z: JOB_MESSAGE_BASIC: Executing operation write/Write/WriteImpl/GroupByKey/Create
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:14.204Z: JOB_MESSAGE_DEBUG: Starting worker pool setup.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:14.233Z: JOB_MESSAGE_BASIC: Executing operation group/Create
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:14.233Z: JOB_MESSAGE_BASIC: Starting 10 workers in us-central1-c...
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:14.307Z: JOB_MESSAGE_BASIC: Finished operation group/Create
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:14.307Z: JOB_MESSAGE_BASIC: Finished operation write/Write/WriteImpl/GroupByKey/Create
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:14.372Z: JOB_MESSAGE_DEBUG: Value "write/Write/WriteImpl/GroupByKey/Session" materialized.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:14.413Z: JOB_MESSAGE_DEBUG: Value "group/Session" materialized.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:14.510Z: JOB_MESSAGE_BASIC: Executing operation read/Read+split+pair_with_one+group/Reify+group/Write
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:38.717Z: JOB_MESSAGE_DETAILED: Autoscaling: Raised the number of workers to 6 based on the rate of progress in the currently running stage(s).
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:38.753Z: JOB_MESSAGE_DETAILED: Resized worker pool to 6, though goal was 10.  This could be a quota issue.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:44.238Z: JOB_MESSAGE_DETAILED: Autoscaling: Raised the number of workers to 9 based on the rate of progress in the currently running stage(s).
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:44.263Z: JOB_MESSAGE_DETAILED: Resized worker pool to 9, though goal was 10.  This could be a quota issue.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T18:59:49.140Z: JOB_MESSAGE_WARNING: Your project already contains 100 Dataflow-created metric descriptors and Stackdriver will not create new Dataflow custom metrics for this job. Each unique user-defined metric name (independent of the DoFn in which it is defined) produces a new metric descriptor. To delete old / unused metric descriptors see https://developers.google.com/apis-explorer/#p/monitoring/v3/monitoring.projects.metricDescriptors.list and https://developers.google.com/apis-explorer/#p/monitoring/v3/monitoring.projects.metricDescriptors.delete
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:00:00.482Z: JOB_MESSAGE_DETAILED: Autoscaling: Raised the number of workers to 10 based on the rate of progress in the currently running stage(s).
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:01:13.544Z: JOB_MESSAGE_DETAILED: Workers have started successfully.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:01:13.580Z: JOB_MESSAGE_DETAILED: Workers have started successfully.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:04:42.665Z: JOB_MESSAGE_BASIC: Finished operation write/Write/WriteImpl/DoOnce/Read+write/Write/WriteImpl/InitializeWrite
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:04:42.737Z: JOB_MESSAGE_DEBUG: Value "write/Write/WriteImpl/DoOnce/Read.out" materialized.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:04:42.767Z: JOB_MESSAGE_DEBUG: Value "write/Write/WriteImpl/InitializeWrite.out" materialized.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:04:42.841Z: JOB_MESSAGE_BASIC: Executing operation write/Write/WriteImpl/WriteBundles/_UnpickledSideInput(InitializeWrite.out.0)
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:04:42.868Z: JOB_MESSAGE_BASIC: Executing operation write/Write/WriteImpl/FinalizeWrite/_UnpickledSideInput(InitializeWrite.out.0)
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:04:42.885Z: JOB_MESSAGE_BASIC: Finished operation write/Write/WriteImpl/WriteBundles/_UnpickledSideInput(InitializeWrite.out.0)
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:04:42.906Z: JOB_MESSAGE_BASIC: Executing operation write/Write/WriteImpl/PreFinalize/_UnpickledSideInput(InitializeWrite.out.0)
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:04:42.927Z: JOB_MESSAGE_BASIC: Finished operation write/Write/WriteImpl/FinalizeWrite/_UnpickledSideInput(InitializeWrite.out.0)
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:04:42.954Z: JOB_MESSAGE_BASIC: Finished operation write/Write/WriteImpl/PreFinalize/_UnpickledSideInput(InitializeWrite.out.0)
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:04:42.965Z: JOB_MESSAGE_DEBUG: Value "write/Write/WriteImpl/WriteBundles/_UnpickledSideInput(InitializeWrite.out.0).output" materialized.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:04:42.999Z: JOB_MESSAGE_DEBUG: Value "write/Write/WriteImpl/FinalizeWrite/_UnpickledSideInput(InitializeWrite.out.0).output" materialized.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:04:43.032Z: JOB_MESSAGE_DEBUG: Value "write/Write/WriteImpl/PreFinalize/_UnpickledSideInput(InitializeWrite.out.0).output" materialized.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:05:14.040Z: JOB_MESSAGE_DETAILED: Checking permissions granted to controller Service Account.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:06:52.107Z: JOB_MESSAGE_BASIC: Finished operation read/Read+split+pair_with_one+group/Reify+group/Write
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:06:52.178Z: JOB_MESSAGE_BASIC: Executing operation group/Close
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:06:52.236Z: JOB_MESSAGE_BASIC: Finished operation group/Close
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:06:52.306Z: JOB_MESSAGE_BASIC: Executing operation group/Read+group/GroupByWindow+count+format+write/Write/WriteImpl/WriteBundles/WriteBundles+write/Write/WriteImpl/Pair+write/Write/WriteImpl/WindowInto(WindowIntoFn)+write/Write/WriteImpl/GroupByKey/Reify+write/Write/WriteImpl/GroupByKey/Write
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:09:13.260Z: JOB_MESSAGE_BASIC: Finished operation group/Read+group/GroupByWindow+count+format+write/Write/WriteImpl/WriteBundles/WriteBundles+write/Write/WriteImpl/Pair+write/Write/WriteImpl/WindowInto(WindowIntoFn)+write/Write/WriteImpl/GroupByKey/Reify+write/Write/WriteImpl/GroupByKey/Write
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:09:13.381Z: JOB_MESSAGE_BASIC: Executing operation write/Write/WriteImpl/GroupByKey/Close
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:09:13.438Z: JOB_MESSAGE_BASIC: Finished operation write/Write/WriteImpl/GroupByKey/Close
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:09:13.502Z: JOB_MESSAGE_BASIC: Executing operation write/Write/WriteImpl/GroupByKey/Read+write/Write/WriteImpl/GroupByKey/GroupByWindow+write/Write/WriteImpl/Extract
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:09:15.932Z: JOB_MESSAGE_BASIC: Finished operation write/Write/WriteImpl/GroupByKey/Read+write/Write/WriteImpl/GroupByKey/GroupByWindow+write/Write/WriteImpl/Extract
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:09:16.021Z: JOB_MESSAGE_DEBUG: Value "write/Write/WriteImpl/Extract.out" materialized.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:09:16.104Z: JOB_MESSAGE_BASIC: Executing operation write/Write/WriteImpl/FinalizeWrite/_UnpickledSideInput(Extract.out.0)
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:09:16.142Z: JOB_MESSAGE_BASIC: Executing operation write/Write/WriteImpl/PreFinalize/_UnpickledSideInput(Extract.out.0)
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:09:16.177Z: JOB_MESSAGE_BASIC: Finished operation write/Write/WriteImpl/FinalizeWrite/_UnpickledSideInput(Extract.out.0)
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:09:16.196Z: JOB_MESSAGE_BASIC: Finished operation write/Write/WriteImpl/PreFinalize/_UnpickledSideInput(Extract.out.0)
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:09:16.262Z: JOB_MESSAGE_DEBUG: Value "write/Write/WriteImpl/FinalizeWrite/_UnpickledSideInput(Extract.out.0).output" materialized.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:09:16.299Z: JOB_MESSAGE_DEBUG: Value "write/Write/WriteImpl/PreFinalize/_UnpickledSideInput(Extract.out.0).output" materialized.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:09:16.387Z: JOB_MESSAGE_BASIC: Executing operation write/Write/WriteImpl/PreFinalize/PreFinalize
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:09:19.106Z: JOB_MESSAGE_BASIC: Finished operation write/Write/WriteImpl/PreFinalize/PreFinalize
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:09:19.193Z: JOB_MESSAGE_DEBUG: Value "write/Write/WriteImpl/PreFinalize.out" materialized.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:09:19.263Z: JOB_MESSAGE_BASIC: Executing operation write/Write/WriteImpl/FinalizeWrite/_UnpickledSideInput(PreFinalize.out.0)
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:09:19.316Z: JOB_MESSAGE_BASIC: Finished operation write/Write/WriteImpl/FinalizeWrite/_UnpickledSideInput(PreFinalize.out.0)
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:09:19.389Z: JOB_MESSAGE_DEBUG: Value "write/Write/WriteImpl/FinalizeWrite/_UnpickledSideInput(PreFinalize.out.0).output" materialized.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:09:19.460Z: JOB_MESSAGE_BASIC: Executing operation write/Write/WriteImpl/FinalizeWrite/FinalizeWrite
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:09:22.064Z: JOB_MESSAGE_BASIC: Finished operation write/Write/WriteImpl/FinalizeWrite/FinalizeWrite
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:09:22.137Z: JOB_MESSAGE_DEBUG: Executing success step success24
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:09:22.291Z: JOB_MESSAGE_DETAILED: Cleaning up.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:09:22.362Z: JOB_MESSAGE_DEBUG: Starting worker pool teardown.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:09:22.407Z: JOB_MESSAGE_BASIC: Stopping worker pool...
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:10:46.314Z: JOB_MESSAGE_DETAILED: Autoscaling: Resized worker pool from 10 to 0.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:10:46.371Z: JOB_MESSAGE_BASIC: Worker pool stopped.
INFO:apache_beam.runners.dataflow.dataflow_runner:2020-04-17T19:10:46.403Z: JOB_MESSAGE_DEBUG: Tearing down pending resources...
INFO:apache_beam.runners.dataflow.dataflow_runner:Job 2020-04-17_11_59_06-16952517834608177752 is in state JOB_STATE_DONE
DEBUG:apache_beam.io.filesystem:Listing files in 'gs://temp-storage-for-end-to-end-tests/py-it-cloud/output/1587149941105/results'
DEBUG:apache_beam.io.filesystem:translate_pattern: 'gs://temp-storage-for-end-to-end-tests/py-it-cloud/output/1587149941105/results*-of-*' -> 'gs\\:\\/\\/temp\\-storage\\-for\\-end\\-to\\-end\\-tests\\/py\\-it\\-cloud\\/output\\/1587149941105\\/results[^/\\\\]*\\-of\\-[^/\\\\]*'
INFO:apache_beam.io.gcp.gcsio:Starting the size estimation of the input
INFO:apache_beam.io.gcp.gcsio:Finished listing 30 files in 0.14867830276489258 seconds.
INFO:apache_beam.testing.pipeline_verifiers:Find 30 files in gs://temp-storage-for-end-to-end-tests/py-it-cloud/output/1587149941105/results*-of-*: 
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gs://temp-storage-for-end-to-end-tests/py-it-cloud/output/1587149941105/results-00006-of-00030
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gs://temp-storage-for-end-to-end-tests/py-it-cloud/output/1587149941105/results-00002-of-00030

IssueCommand timed out after 1200 seconds.  Process was killed by perfkitbenchmarker.
2020-04-17 19:17:16,392 6a727be8 MainThread beam_integration_benchmark(1/1) ERROR    Benchmark 1/1 beam_integration_benchmark (UID: beam_integration_benchmark0) failed. Execution will continue.
2020-04-17 19:17:16,393 6a727be8 MainThread beam_integration_benchmark(1/1) INFO     Benchmark run statuses:
---------------------------------------------------------------------------------
Name                        UID                          Status  Failed Substatus
---------------------------------------------------------------------------------
beam_integration_benchmark  beam_integration_benchmark0  FAILED                  
---------------------------------------------------------------------------------
Success rate: 0.00% (0/1)
2020-04-17 19:17:16,401 6a727be8 MainThread beam_integration_benchmark(1/1) INFO     Complete logs can be found at: <https://builds.apache.org/job/beam_PerformanceTests_WordCountIT_Py35/ws/runs/6a727be8/pkb.log>
2020-04-17 19:17:16,401 6a727be8 MainThread beam_integration_benchmark(1/1) INFO     Completion statuses can be found at: <https://builds.apache.org/job/beam_PerformanceTests_WordCountIT_Py35/ws/runs/6a727be8/completion_statuses.json>
Build step 'Execute shell' marked build as failure

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