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Posted to commits@datafu.apache.org by mh...@apache.org on 2018/01/29 19:04:39 UTC
svn commit: r1822557 [11/48] - in /incubator/datafu/site/docs: datafu/1.3.2/
datafu/1.3.2/datafu/ datafu/1.3.2/datafu/pig/ datafu/1.3.2/datafu/pig/bags/
datafu/1.3.2/datafu/pig/geo/ datafu/1.3.2/datafu/pig/hash/
datafu/1.3.2/datafu/pig/hash/lsh/ datafu...
Added: incubator/datafu/site/docs/datafu/1.3.2/datafu/pig/hash/lsh/package-tree.html
URL: http://svn.apache.org/viewvc/incubator/datafu/site/docs/datafu/1.3.2/datafu/pig/hash/lsh/package-tree.html?rev=1822557&view=auto
==============================================================================
--- incubator/datafu/site/docs/datafu/1.3.2/datafu/pig/hash/lsh/package-tree.html (added)
+++ incubator/datafu/site/docs/datafu/1.3.2/datafu/pig/hash/lsh/package-tree.html Mon Jan 29 19:04:35 2018
@@ -0,0 +1,142 @@
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+<!-- NewPage -->
+<html lang="en">
+<head>
+<!-- Generated by javadoc (version 1.7.0_79) on Mon Jan 29 11:03:10 PST 2018 -->
+<title>datafu.pig.hash.lsh Class Hierarchy (datafu-pig 1.3.2 API)</title>
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+<a name="skip-navbar_top">
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+<!-- ========= END OF TOP NAVBAR ========= -->
+<div class="header">
+<h1 class="title">Hierarchy For Package datafu.pig.hash.lsh</h1>
+<span class="strong">Package Hierarchies:</span>
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Added: incubator/datafu/site/docs/datafu/1.3.2/datafu/pig/hash/lsh/util/DataTypeUtil.html
URL: http://svn.apache.org/viewvc/incubator/datafu/site/docs/datafu/1.3.2/datafu/pig/hash/lsh/util/DataTypeUtil.html?rev=1822557&view=auto
==============================================================================
--- incubator/datafu/site/docs/datafu/1.3.2/datafu/pig/hash/lsh/util/DataTypeUtil.html (added)
+++ incubator/datafu/site/docs/datafu/1.3.2/datafu/pig/hash/lsh/util/DataTypeUtil.html Mon Jan 29 19:04:35 2018
@@ -0,0 +1,351 @@
+<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">
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+<!-- Generated by javadoc (version 1.7.0_79) on Mon Jan 29 11:03:10 PST 2018 -->
+<title>DataTypeUtil (datafu-pig 1.3.2 API)</title>
+<meta name="date" content="2018-01-29">
+<link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" title="Style">
+</head>
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+<script type="text/javascript"><!--
+ if (location.href.indexOf('is-external=true') == -1) {
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+<li>Summary: </li>
+<li>Nested | </li>
+<li><a href="#enum_constant_summary">Enum Constants</a> | </li>
+<li>Field | </li>
+<li><a href="#method_summary">Method</a></li>
+</ul>
+<ul class="subNavList">
+<li>Detail: </li>
+<li><a href="#enum_constant_detail">Enum Constants</a> | </li>
+<li>Field | </li>
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+</ul>
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+<!-- ========= END OF TOP NAVBAR ========= -->
+<!-- ======== START OF CLASS DATA ======== -->
+<div class="header">
+<div class="subTitle">datafu.pig.hash.lsh.util</div>
+<h2 title="Enum DataTypeUtil" class="title">Enum DataTypeUtil</h2>
+</div>
+<div class="contentContainer">
+<ul class="inheritance">
+<li>java.lang.Object</li>
+<li>
+<ul class="inheritance">
+<li>java.lang.Enum<<a href="../../../../../datafu/pig/hash/lsh/util/DataTypeUtil.html" title="enum in datafu.pig.hash.lsh.util">DataTypeUtil</a>></li>
+<li>
+<ul class="inheritance">
+<li>datafu.pig.hash.lsh.util.DataTypeUtil</li>
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+</dl>
+<hr>
+<br>
+<pre>public enum <span class="strong">DataTypeUtil</span>
+extends java.lang.Enum<<a href="../../../../../datafu/pig/hash/lsh/util/DataTypeUtil.html" title="enum in datafu.pig.hash.lsh.util">DataTypeUtil</a>></pre>
+<div class="block">A utility function to translate between pig types and vectors.</div>
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+<caption><span>Enum Constants</span><span class="tabEnd"> </span></caption>
+<tr>
+<th class="colOne" scope="col">Enum Constant and Description</th>
+</tr>
+<tr class="altColor">
+<td class="colOne"><code><strong><a href="../../../../../datafu/pig/hash/lsh/util/DataTypeUtil.html#INSTANCE">INSTANCE</a></strong></code> </td>
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+<caption><span>Methods</span><span class="tabEnd"> </span></caption>
+<tr>
+<th class="colFirst" scope="col">Modifier and Type</th>
+<th class="colLast" scope="col">Method and Description</th>
+</tr>
+<tr class="altColor">
+<td class="colFirst"><code>org.apache.commons.math.linear.RealVector</code></td>
+<td class="colLast"><code><strong><a href="../../../../../datafu/pig/hash/lsh/util/DataTypeUtil.html#convert(org.apache.pig.data.Tuple,%20int)">convert</a></strong>(org.apache.pig.data.Tuple t,
+ int dim)</code>
+<div class="block">Convert a tuple t into a RealVector of dimension dim.</div>
+</td>
+</tr>
+<tr class="rowColor">
+<td class="colFirst"><code>static boolean</code></td>
+<td class="colLast"><code><strong><a href="../../../../../datafu/pig/hash/lsh/util/DataTypeUtil.html#isValidVector(org.apache.pig.impl.logicalLayer.schema.Schema.FieldSchema,%20int)">isValidVector</a></strong>(org.apache.pig.impl.logicalLayer.schema.Schema.FieldSchema inputSchema,
+ int dimension)</code> </td>
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+<tr class="altColor">
+<td class="colFirst"><code>static <a href="../../../../../datafu/pig/hash/lsh/util/DataTypeUtil.html" title="enum in datafu.pig.hash.lsh.util">DataTypeUtil</a></code></td>
+<td class="colLast"><code><strong><a href="../../../../../datafu/pig/hash/lsh/util/DataTypeUtil.html#valueOf(java.lang.String)">valueOf</a></strong>(java.lang.String name)</code>
+<div class="block">Returns the enum constant of this type with the specified name.</div>
+</td>
+</tr>
+<tr class="rowColor">
+<td class="colFirst"><code>static <a href="../../../../../datafu/pig/hash/lsh/util/DataTypeUtil.html" title="enum in datafu.pig.hash.lsh.util">DataTypeUtil</a>[]</code></td>
+<td class="colLast"><code><strong><a href="../../../../../datafu/pig/hash/lsh/util/DataTypeUtil.html#values()">values</a></strong>()</code>
+<div class="block">Returns an array containing the constants of this enum type, in
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+<div class="block">Returns an array containing the constants of this enum type, in
+the order they are declared. This method may be used to iterate
+over the constants as follows:
+<pre>
+for (DataTypeUtil c : DataTypeUtil.values())
+ System.out.println(c);
+</pre></div>
+<dl><dt><span class="strong">Returns:</span></dt><dd>an array containing the constants of this enum type, in the order they are declared</dd></dl>
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+<div class="block">Returns the enum constant of this type with the specified name.
+The string must match <i>exactly</i> an identifier used to declare an
+enum constant in this type. (Extraneous whitespace characters are
+not permitted.)</div>
+<dl><dt><span class="strong">Parameters:</span></dt><dd><code>name</code> - the name of the enum constant to be returned.</dd>
+<dt><span class="strong">Returns:</span></dt><dd>the enum constant with the specified name</dd>
+<dt><span class="strong">Throws:</span></dt>
+<dd><code>java.lang.IllegalArgumentException</code> - if this enum type has no constant with the specified name</dd>
+<dd><code>java.lang.NullPointerException</code> - if the argument is null</dd></dl>
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+<pre>public org.apache.commons.math.linear.RealVector convert(org.apache.pig.data.Tuple t,
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+ throws org.apache.pig.PigException</pre>
+<div class="block">Convert a tuple t into a RealVector of dimension dim.
+ The tuple can be of a couple of forms:
+
+ <ul>
+ <li>A tuple composed of dim numeric types a la (1.0,2.0,3,5.0)</li>
+ <li>A tuple which contains as its first element a tuple like above a la ( (1.0,2.0,3,5.0), 5) ) would yield (1.0,2.0,3,5.0)</li>
+ <li>A bag containing tuples where the first element is the position and the second element is the value. This is for sparse vectors and it looks like this ( { (0,1.0), (1, 2.0), (3,3), (4,5.0) } ).</li>
+ </ul></div>
+<dl><dt><span class="strong">Parameters:</span></dt><dd><code>t</code> - The tuple to convert to a vector</dd><dd><code>dim</code> - The dimension of the vector</dd>
+<dt><span class="strong">Returns:</span></dt><dd>The actual RealVector (which may or may not be sparse)</dd>
+<dt><span class="strong">Throws:</span></dt>
+<dd><code>org.apache.pig.PigException</code> - PigException</dd></dl>
+</li>
+</ul>
+<a name="isValidVector(org.apache.pig.impl.logicalLayer.schema.Schema.FieldSchema, int)">
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+ int dimension)</pre>
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+</ul>
+</li>
+</ul>
+</li>
+</ul>
+</div>
+</div>
+<!-- ========= END OF CLASS DATA ========= -->
+<!-- ======= START OF BOTTOM NAVBAR ====== -->
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+<script type="text/javascript"><!--
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+<!-- ========= START OF TOP NAVBAR ======= -->
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+<!-- -->
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+<ul class="navList" title="Navigation">
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+<li>Class</li>
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+<h1 title="Package" class="title">Package datafu.pig.hash</h1>
+<div class="docSummary">
+<div class="block">UDFs for computing hashes from data.</div>
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+<h2 title="Package datafu.pig.hash Description">Package datafu.pig.hash Description</h2>
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+</div>
+<!-- ======= START OF BOTTOM NAVBAR ====== -->
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+<ul class="navList" title="Navigation">
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+<!-- -->
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Added: incubator/datafu/site/docs/datafu/1.3.2/datafu/pig/linkanalysis/PageRank.html
URL: http://svn.apache.org/viewvc/incubator/datafu/site/docs/datafu/1.3.2/datafu/pig/linkanalysis/PageRank.html?rev=1822557&view=auto
==============================================================================
--- incubator/datafu/site/docs/datafu/1.3.2/datafu/pig/linkanalysis/PageRank.html (added)
+++ incubator/datafu/site/docs/datafu/1.3.2/datafu/pig/linkanalysis/PageRank.html Mon Jan 29 19:04:35 2018
@@ -0,0 +1,479 @@
+<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">
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+<div class="subTitle">datafu.pig.linkanalysis</div>
+<h2 title="Class PageRank" class="title">Class PageRank</h2>
+</div>
+<div class="contentContainer">
+<ul class="inheritance">
+<li>java.lang.Object</li>
+<li>
+<ul class="inheritance">
+<li>org.apache.pig.EvalFunc<T></li>
+<li>
+<ul class="inheritance">
+<li>org.apache.pig.AccumulatorEvalFunc<org.apache.pig.data.DataBag></li>
+<li>
+<ul class="inheritance">
+<li>datafu.pig.linkanalysis.PageRank</li>
+</ul>
+</li>
+</ul>
+</li>
+</ul>
+</li>
+</ul>
+<div class="description">
+<ul class="blockList">
+<li class="blockList">
+<dl>
+<dt>All Implemented Interfaces:</dt>
+<dd>org.apache.pig.Accumulator<org.apache.pig.data.DataBag></dd>
+</dl>
+<hr>
+<br>
+<pre>public class <span class="strong">PageRank</span>
+extends org.apache.pig.AccumulatorEvalFunc<org.apache.pig.data.DataBag></pre>
+<div class="block">A UDF which implements <a href="http://en.wikipedia.org/wiki/PageRank" target="_blank">PageRank</a>.
+
+ <p>
+ This is not a distributed implementation. Each graph is stored in memory while running the algorithm, with edges optionally
+ spilled to disk to conserve memory. This can be used to distribute the execution of PageRank on multiple
+ reasonably sized graphs. It does not distribute execuion of PageRank for each individual graph. Each graph is identified
+ by an integer valued topic ID.
+ </p>
+
+ <p>
+ If the graph is too large to fit in memory than an alternative method must be used, such as an iterative approach which runs
+ many MapReduce jobs in a sequence to complete the PageRank iterations.
+ </p>
+
+ <p>
+ Each graph is represented through a bag of (source,edges) tuples. The 'source' is an integer ID representing the source node.
+ The 'edges' are the outgoing edges from the source node, represented as a bag of (dest,weight) tuples. The 'dest' is an
+ integer ID representing the destination node. The weight is a double representing how much the edge should be weighted.
+ For a standard PageRank implementation just use weight of 1.0.
+ </p>
+
+ <p>
+ The output of the UDF is a bag of (source,rank) pairs, where 'rank' is the PageRank value for that source in the graph.
+ </p>
+
+ <p>
+ There are several configurable options for this UDF, among them:
+ </p>
+
+ <ul>
+ <li>
+ <b>alpha</b>: Controls the PageRank alpha value. The default is 0.85. A higher value reduces the "random jump"
+ factor and causes the rank to be influenced more by edges.
+ </li>
+ <li>
+ <b>max_iters</b>: The maximum number of iterations to run. The default is 150.
+ </li>
+ <li>
+ <b>dangling_nodes</b>: How to handling "dangling nodes", i.e. nodes with no outgoing edges. When "true" this is equivalent
+ to forcing a dangling node to have an outgoing edge to every other node in the graph. The default is "false".
+ </li>
+ <li>
+ <b>tolerance</b>: A threshold which causes iterations to cease. It is measured from the total change in ranks from each of
+ the nodes in the graph. As the ranks settle on their final values the total change decreases. This can be used
+ to stop iterations early. The default is 1e-16.
+ </li>
+ <li>
+ <b>max_nodes_and_edges</b>: This is a control to prevent running out of memory. As a graph is loaded, if the sum of edges
+ and nodes exceeds this value then it will stop. It will not fail but PageRank will not be run on this graph. Instead a null
+ value will be returned as a result. The default is 100M.
+ </li>
+ <li>
+ <b>spill_to_edge_disk_storage</b>: Used to conserve memory. When "true" it causes the edge data to be written to disk in a temp file instead
+ of being held in memory when the number of edges exceeds a threshold. The nodes are still held in memory however.
+ Each iteration of PageRank will stream through the edges stored on disk. The default is "false".
+ </li>
+ <li>
+ <b>max_edges_in_memory</b>: When spilling edges to disk is enabled, this is the threshold which triggers that behavior. The default is 30M.
+ </li>
+ </ul>
+
+ <p>
+ Parameters are configured by passing them in as a sequence of pairs into the UDF constructor. For example, below the alpha value is set to
+ 0.87 and dangling nodes are enabled. All arguments must be strings.
+ </p>
+
+ <pre>
+ <code>define PageRank datafu.pig.linkanalysis.PageRank('alpha','0.87','dangling_nodes','true');
+ </code>
+ </pre>
+
+ Full example:
+ <pre>
+ <code>topic_edges = LOAD 'input_edges' as (topic:INT,source:INT,dest:INT,weight:DOUBLE);
+
+ topic_edges_grouped = GROUP topic_edges by (topic, source) ;
+ topic_edges_grouped = FOREACH topic_edges_grouped GENERATE
+ group.topic as topic,
+ group.source as source,
+ topic_edges.(dest,weight) as edges;
+
+ topic_edges_grouped_by_topic = GROUP topic_edges_grouped BY topic;
+
+ topic_ranks = FOREACH topic_edges_grouped_by_topic GENERATE
+ group as topic,
+ FLATTEN(PageRank(topic_edges_grouped.(source,edges))) as (source,rank);
+
+ topic_ranks = FOREACH topic_ranks GENERATE
+ topic, source, rank;
+
+ </code>
+ </pre></div>
+</li>
+</ul>
+</div>
+<div class="summary">
+<ul class="blockList">
+<li class="blockList">
+<!-- ======== NESTED CLASS SUMMARY ======== -->
+<ul class="blockList">
+<li class="blockList"><a name="nested_class_summary">
+<!-- -->
+</a>
+<h3>Nested Class Summary</h3>
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+<!-- -->
+</a>
+<h3>Nested classes/interfaces inherited from class org.apache.pig.EvalFunc</h3>
+<code>org.apache.pig.EvalFunc.SchemaType</code></li>
+</ul>
+</li>
+</ul>
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+<h3>Fields inherited from class org.apache.pig.EvalFunc</h3>
+<code>log, pigLogger, reporter, returnType</code></li>
+</ul>
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+<h3>Constructor Summary</h3>
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+<caption><span>Constructors</span><span class="tabEnd"> </span></caption>
+<tr>
+<th class="colOne" scope="col">Constructor and Description</th>
+</tr>
+<tr class="altColor">
+<td class="colOne"><code><strong><a href="../../../datafu/pig/linkanalysis/PageRank.html#PageRank()">PageRank</a></strong>()</code> </td>
+</tr>
+<tr class="rowColor">
+<td class="colOne"><code><strong><a href="../../../datafu/pig/linkanalysis/PageRank.html#PageRank(java.lang.String...)">PageRank</a></strong>(java.lang.String... parameters)</code> </td>
+</tr>
+</table>
+</li>
+</ul>
+<!-- ========== METHOD SUMMARY =========== -->
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+<!-- -->
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+<caption><span>Methods</span><span class="tabEnd"> </span></caption>
+<tr>
+<th class="colFirst" scope="col">Modifier and Type</th>
+<th class="colLast" scope="col">Method and Description</th>
+</tr>
+<tr class="altColor">
+<td class="colFirst"><code>void</code></td>
+<td class="colLast"><code><strong><a href="../../../datafu/pig/linkanalysis/PageRank.html#accumulate(org.apache.pig.data.Tuple)">accumulate</a></strong>(org.apache.pig.data.Tuple t)</code> </td>
+</tr>
+<tr class="rowColor">
+<td class="colFirst"><code>void</code></td>
+<td class="colLast"><code><strong><a href="../../../datafu/pig/linkanalysis/PageRank.html#cleanup()">cleanup</a></strong>()</code> </td>
+</tr>
+<tr class="altColor">
+<td class="colFirst"><code>org.apache.pig.data.DataBag</code></td>
+<td class="colLast"><code><strong><a href="../../../datafu/pig/linkanalysis/PageRank.html#getValue()">getValue</a></strong>()</code> </td>
+</tr>
+<tr class="rowColor">
+<td class="colFirst"><code>org.apache.pig.impl.logicalLayer.schema.Schema</code></td>
+<td class="colLast"><code><strong><a href="../../../datafu/pig/linkanalysis/PageRank.html#outputSchema(org.apache.pig.impl.logicalLayer.schema.Schema)">outputSchema</a></strong>(org.apache.pig.impl.logicalLayer.schema.Schema input)</code> </td>
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+<!-- -->
+</a>
+<h3>Methods inherited from class org.apache.pig.AccumulatorEvalFunc</h3>
+<code>exec</code></li>
+</ul>
+<ul class="blockList">
+<li class="blockList"><a name="methods_inherited_from_class_org.apache.pig.EvalFunc">
+<!-- -->
+</a>
+<h3>Methods inherited from class org.apache.pig.EvalFunc</h3>
+<code>allowCompileTimeCalculation, finish, getArgToFuncMapping, getCacheFiles, getInputSchema, getLogger, getPigLogger, getReporter, getReturnType, getSchemaName, getSchemaType, getShipFiles, isAsynchronous, progress, setInputSchema, setPigLogger, setReporter, setUDFContextSignature, warn</code></li>
+</ul>
+<ul class="blockList">
+<li class="blockList"><a name="methods_inherited_from_class_java.lang.Object">
+<!-- -->
+</a>
+<h3>Methods inherited from class java.lang.Object</h3>
+<code>clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait</code></li>
+</ul>
+</li>
+</ul>
+</li>
+</ul>
+</div>
+<div class="details">
+<ul class="blockList">
+<li class="blockList">
+<!-- ========= CONSTRUCTOR DETAIL ======== -->
+<ul class="blockList">
+<li class="blockList"><a name="constructor_detail">
+<!-- -->
+</a>
+<h3>Constructor Detail</h3>
+<a name="PageRank()">
+<!-- -->
+</a>
+<ul class="blockList">
+<li class="blockList">
+<h4>PageRank</h4>
+<pre>public PageRank()</pre>
+</li>
+</ul>
+<a name="PageRank(java.lang.String...)">
+<!-- -->
+</a>
+<ul class="blockListLast">
+<li class="blockList">
+<h4>PageRank</h4>
+<pre>public PageRank(java.lang.String... parameters)</pre>
+</li>
+</ul>
+</li>
+</ul>
+<!-- ============ METHOD DETAIL ========== -->
+<ul class="blockList">
+<li class="blockList"><a name="method_detail">
+<!-- -->
+</a>
+<h3>Method Detail</h3>
+<a name="accumulate(org.apache.pig.data.Tuple)">
+<!-- -->
+</a>
+<ul class="blockList">
+<li class="blockList">
+<h4>accumulate</h4>
+<pre>public void accumulate(org.apache.pig.data.Tuple t)
+ throws java.io.IOException</pre>
+<dl>
+<dt><strong>Specified by:</strong></dt>
+<dd><code>accumulate</code> in interface <code>org.apache.pig.Accumulator<org.apache.pig.data.DataBag></code></dd>
+<dt><strong>Specified by:</strong></dt>
+<dd><code>accumulate</code> in class <code>org.apache.pig.AccumulatorEvalFunc<org.apache.pig.data.DataBag></code></dd>
+<dt><span class="strong">Throws:</span></dt>
+<dd><code>java.io.IOException</code></dd></dl>
+</li>
+</ul>
+<a name="getValue()">
+<!-- -->
+</a>
+<ul class="blockList">
+<li class="blockList">
+<h4>getValue</h4>
+<pre>public org.apache.pig.data.DataBag getValue()</pre>
+<dl>
+<dt><strong>Specified by:</strong></dt>
+<dd><code>getValue</code> in interface <code>org.apache.pig.Accumulator<org.apache.pig.data.DataBag></code></dd>
+<dt><strong>Specified by:</strong></dt>
+<dd><code>getValue</code> in class <code>org.apache.pig.AccumulatorEvalFunc<org.apache.pig.data.DataBag></code></dd>
+</dl>
+</li>
+</ul>
+<a name="cleanup()">
+<!-- -->
+</a>
+<ul class="blockList">
+<li class="blockList">
+<h4>cleanup</h4>
+<pre>public void cleanup()</pre>
+<dl>
+<dt><strong>Specified by:</strong></dt>
+<dd><code>cleanup</code> in interface <code>org.apache.pig.Accumulator<org.apache.pig.data.DataBag></code></dd>
+<dt><strong>Specified by:</strong></dt>
+<dd><code>cleanup</code> in class <code>org.apache.pig.AccumulatorEvalFunc<org.apache.pig.data.DataBag></code></dd>
+</dl>
+</li>
+</ul>
+<a name="outputSchema(org.apache.pig.impl.logicalLayer.schema.Schema)">
+<!-- -->
+</a>
+<ul class="blockListLast">
+<li class="blockList">
+<h4>outputSchema</h4>
+<pre>public org.apache.pig.impl.logicalLayer.schema.Schema outputSchema(org.apache.pig.impl.logicalLayer.schema.Schema input)</pre>
+<dl>
+<dt><strong>Overrides:</strong></dt>
+<dd><code>outputSchema</code> in class <code>org.apache.pig.EvalFunc<org.apache.pig.data.DataBag></code></dd>
+</dl>
+</li>
+</ul>
+</li>
+</ul>
+</li>
+</ul>
+</div>
+</div>
+<!-- ========= END OF CLASS DATA ========= -->
+<!-- ======= START OF BOTTOM NAVBAR ====== -->
+<div class="bottomNav"><a name="navbar_bottom">
+<!-- -->
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+</ul>
+</div>
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+<li>Prev Class</li>
+<li><a href="../../../datafu/pig/linkanalysis/PageRankImpl.html" title="class in datafu.pig.linkanalysis"><span class="strong">Next Class</span></a></li>
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