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Posted to dev@airavata.apache.org by "Amila Jayasekara (JIRA)" <ji...@apache.org> on 2013/06/28 22:12:20 UTC

[jira] [Updated] (AIRAVATA-819) Support the workflows with ForEach inputs to get inputs from file

     [ https://issues.apache.org/jira/browse/AIRAVATA-819?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]

Amila Jayasekara updated AIRAVATA-819:
--------------------------------------

    Fix Version/s:     (was: 0.8)
                   0.9
    
> Support the workflows with ForEach inputs to get inputs from file
> -----------------------------------------------------------------
>
>                 Key: AIRAVATA-819
>                 URL: https://issues.apache.org/jira/browse/AIRAVATA-819
>             Project: Airavata
>          Issue Type: Improvement
>    Affects Versions: 0.7
>            Reporter: Heshan Suriyaarachchi
>             Fix For: 0.9
>
>
> Let me explain what I've meant here. 
> In case of a usecase like gene sequence alignment, you might give 1000s of gene sequences as the input. In a situation like that, what we have to do is to have comma separated string with the inputs. In my usecase, it's not practical because a single sequence strand is having a substantial length. Therefore, I think it'll be easier for the user, if we provide a mechanism where the user can give the input as a file and instead of the comma delimiter, we could use a "new line". 
> This is something which I felt needed when doing some testing with the EC2Provider. 

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