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Posted to commits@mxnet.apache.org by GitBox <gi...@apache.org> on 2017/11/11 02:32:31 UTC

[GitHub] ZiyueHuang commented on a change in pull request #8611: optimization for dot(csr.T, dense) = rsp

ZiyueHuang commented on a change in pull request #8611: optimization for dot(csr.T, dense) = rsp
URL: https://github.com/apache/incubator-mxnet/pull/8611#discussion_r150371782
 
 

 ##########
 File path: src/operator/tensor/dot-inl.h
 ##########
 @@ -598,40 +614,52 @@ inline void DotCsrDnsRspImpl(const OpContext& ctx,
   const TBlob col_idx_l = lhs.aux_data(csr::kIdx);
   const TBlob& data_r = rhs;
 
-  // pre-allocate spaces for ret using the dense dimension size
-  ret->CheckAndAlloc({mshadow::Shape1(lhs.shape()[1])});
-  const TBlob data_out = ret->data();
-  const TBlob row_idx_out = ret->aux_data(rowsparse::kIdx);
-
   MSHADOW_SGL_DBL_TYPE_SWITCH(data_l.type_flag_, DType, {  // data type
     MSHADOW_IDX_TYPE_SWITCH(indptr_l.type_flag_, IType, {  // indptr type
       MSHADOW_IDX_TYPE_SWITCH(col_idx_l.type_flag_, CType, {  // col idx type
-        MSHADOW_IDX_TYPE_SWITCH(row_idx_out.type_flag_, RType, {  // row idx type
+        MSHADOW_IDX_TYPE_SWITCH(ret->aux_type(rowsparse::kIdx), RType, {  // row idx type
+          const dim_t num_rows = lhs.shape()[1];
+          size_t workspace_size = 2 * (num_rows * sizeof(dim_t));
+          mshadow::Tensor<cpu, 1, char> workspace =
+            ctx.requested[0].get_space_typed<cpu, 1, char>(
+            mshadow::Shape1(workspace_size), s);
+          dim_t* row_flg = reinterpret_cast<dim_t*>(workspace.dptr_);
+          dim_t* prefix_sum = row_flg + num_rows;
+
+          Fill<false>(s, TBlob(row_flg, mshadow::Shape1(num_rows), cpu::kDevMask), kWriteTo, 0);
+          mxnet_op::Kernel<MarkCsrColKernel, cpu>::Launch(s, lhs.aux_shape(csr::kIdx)[0], row_flg,
+            col_idx_l.dptr<CType>());
+
+          prefix_sum[0] = row_flg[0];
+          for (nnvm::dim_t i = 1; i < num_rows; i++) {
+            prefix_sum[i] = prefix_sum[i - 1] + row_flg[i];
+          }
+          dim_t nnr = prefix_sum[num_rows - 1];
+
+          if (nnr == 0) {
+            FillZerosRspImpl(s, *ret);
+            return;
+          }
+
+          ret->CheckAndAlloc({mshadow::Shape1(nnr)});
+          const TBlob& data_out = ret->data();
+          const TBlob& row_idx = ret->aux_data(rowsparse::kIdx);
+
           dim_t num_threads = data_out.Size();
           mxnet_op::Kernel<set_zero, cpu>::Launch(s, num_threads, data_out.dptr<DType>());
-          RType* row_idx = row_idx_out.dptr<RType>();
-          num_threads = row_idx_out.Size();
-          mxnet_op::Kernel<set_zero, cpu>::Launch(s, num_threads, row_idx);
-          num_threads = mxnet_op::get_num_threads<cpu>(data_out.shape_[0]);
-          dim_t seg_len = (data_out.shape_[0] + num_threads - 1) / num_threads;
+          RType* row_idx_out = row_idx.dptr<RType>();
+
+          mxnet_op::Kernel<FillRspRowIdxKernel, cpu>::Launch(s, num_rows,
+            row_idx_out, prefix_sum, num_rows);
+
+          num_threads = mxnet_op::get_num_threads<cpu>(ret->shape()[0]);
+          dim_t seg_len = (ret->shape()[0] + num_threads - 1) / num_threads;
 
 Review comment:
   I think no, this range should cover num_cols of csr, i.e. num_rows of output. So nnr is not helpful for this kernel.

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