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Posted to dev@sqoop.apache.org by "Sandish Kumar HN (JIRA)" <ji...@apache.org> on 2017/08/24 10:00:16 UTC
[jira] [Assigned] (SQOOP-3147) Import data to Hive Table in S3 in
Parquet format
[ https://issues.apache.org/jira/browse/SQOOP-3147?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Sandish Kumar HN reassigned SQOOP-3147:
---------------------------------------
Assignee: Sandish Kumar HN
> Import data to Hive Table in S3 in Parquet format
> -------------------------------------------------
>
> Key: SQOOP-3147
> URL: https://issues.apache.org/jira/browse/SQOOP-3147
> Project: Sqoop
> Issue Type: Bug
> Affects Versions: 1.4.6
> Reporter: Ahmed Kamal
> Assignee: Sandish Kumar HN
>
> Using this command succeeds only if the Hive Table's location is HDFS. If the table is backed by S3 it throws an exception while trying to move the data from HDFS tmp directory to S3
> Job job_1486539699686_3090 failed with state FAILED due to: Job commit failed: org.kitesdk.data.DatasetIOException: Dataset merge failed
> at org.kitesdk.data.spi.filesystem.FileSystemDataset.merge(FileSystemDataset.java:333)
> at org.kitesdk.data.spi.filesystem.FileSystemDataset.merge(FileSystemDataset.java:56)
> at org.kitesdk.data.mapreduce.DatasetKeyOutputFormat$MergeOutputCommitter.commitJob(DatasetKeyOutputFormat.java:370)
> at org.apache.hadoop.mapreduce.v2.app.commit.CommitterEventHandler$EventProcessor.handleJobCommit(CommitterEventHandler.java:285)
> at org.apache.hadoop.mapreduce.v2.app.commit.CommitterEventHandler$EventProcessor.run(CommitterEventHandler.java:237)
> at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
> at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
> at java.lang.Thread.run(Thread.java:745)
> Caused by: java.io.IOException: Dataset merge failed during rename of hdfs://hdfs-path/tmp/dev_kamal/.temp/job_1486539699686_3090/mr/job_1486539699686_3090/0192f987-bd4c-4cb7-836f-562ac483e008.parquet to s3://bucket_name/dev_kamal/address/0192f987-bd4c-4cb7-836f-562ac483e008.parquet
> at org.kitesdk.data.spi.filesystem.FileSystemDataset.merge(FileSystemDataset.java:329)
> ... 7 more
> sqoop import --connect "jdbc:mysql://connectionUrl" --table "tableName" --as-parquetfile --verbose --username=uname --password=pass --hive-import --delete-target-dir --hive-database dev_kamal --hive-table tableName --hive-overwrite -m 150
> Another issue that I noticed is that Sqoop loads the Avro schema in TBLProperties under avro.schema.literal attribute and if the table has a lot of columns, the schema would be truncated and this would cause a weird exception like this one.
> *Exception :*
> 17/03/07 12:13:13 INFO hive.metastore: Trying to connect to metastore with URI thrift://url:9083
> 17/03/07 12:13:13 INFO hive.metastore: Opened a connection to metastore, current connections: 1
> 17/03/07 12:13:13 INFO hive.metastore: Connected to metastore.
> 17/03/07 12:13:17 DEBUG util.ClassLoaderStack: Restoring classloader: sun.misc.Launcher$AppClassLoader@3e9b1010
> 17/03/07 12:13:17 ERROR sqoop.Sqoop: Got exception running Sqoop: org.apache.avro.SchemaParseException: org.codehaus.jackson.JsonParseException: Unexpected end-of-input: was expecting closing quote for a string value
> at [Source: java.io.StringReader@3fb42ec7; line: 1, column: 6001]
> org.apache.avro.SchemaParseException: org.codehaus.jackson.JsonParseException: Unexpected end-of-input: was expecting closing quote for a string value
> at [Source: java.io.StringReader@3fb42ec7; line: 1, column: 6001]
> at org.apache.avro.Schema$Parser.parse(Schema.java:929)
> at org.apache.avro.Schema$Parser.parse(Schema.java:917)
> at org.kitesdk.data.DatasetDescriptor$Builder.schemaLiteral(DatasetDescriptor.java:475)
> at org.kitesdk.data.spi.hive.HiveUtils.descriptorForTable(HiveUtils.java:154)
> at org.kitesdk.data.spi.hive.HiveAbstractMetadataProvider.load(HiveAbstractMetadataProvider.java:104)
> at org.kitesdk.data.spi.filesystem.FileSystemDatasetRepository.load(FileSystemDatasetRepository.java:192)
> at org.kitesdk.data.Datasets.load(Datasets.java:108)
> at org.kitesdk.data.Datasets.load(Datasets.java:165)
> at org.kitesdk.data.Datasets.load(Datasets.java:187)
> at org.apache.sqoop.mapreduce.ParquetJob.configureImportJob(ParquetJob.java:78)
> at org.apache.sqoop.mapreduce.DataDrivenImportJob.configureMapper(DataDrivenImportJob.java:108)
> at org.apache.sqoop.mapreduce.ImportJobBase.runImport(ImportJobBase.java:260)
> at org.apache.sqoop.manager.SqlManager.importTable(SqlManager.java:673)
> at org.apache.sqoop.manager.MySQLManager.importTable(MySQLManager.java:118)
> at org.apache.sqoop.tool.ImportTool.importTable(ImportTool.java:497)
> at org.apache.sqoop.tool.ImportTool.run(ImportTool.java:605)
> at org.apache.sqoop.Sqoop.run(Sqoop.java:143)
> at org.apache.hadoop.util.ToolRunner.run(ToolRunner.java:70)
> at org.apache.sqoop.Sqoop.runSqoop(Sqoop.java:179)
> at org.apache.sqoop.Sqoop.runTool(Sqoop.java:218)
> at org.apache.sqoop.Sqoop.runTool(Sqoop.java:227)
> at org.apache.sqoop.Sqoop.main(Sqoop.java:236)
> Caused by: org.codehaus.jackson.JsonParseException: Unexpected end-of-input: was expecting closing quote for a string value
> at [Source: java.io.StringReader@3fb42ec7; line: 1, column: 6001]
> at org.codehaus.jackson.JsonParser._constructError(JsonParser.java:1433)
> at org.codehaus.jackson.impl.JsonParserMinimalBase._reportError(JsonParserMinimalBase.java:521)
> at org.codehaus.jackson.impl.JsonParserMinimalBase._reportInvalidEOF(JsonParserMinimalBase.java:454)
> at org.codehaus.jackson.impl.ReaderBasedParser._finishString2(ReaderBasedParser.java:1342)
> at org.codehaus.jackson.impl.ReaderBasedParser._finishString(ReaderBasedParser.java:1330)
> at org.codehaus.jackson.impl.ReaderBasedParser.getText(ReaderBasedParser.java:200)
> at org.codehaus.jackson.map.deser.std.BaseNodeDeserializer.deserializeObject(JsonNodeDeserializer.java:203)
> at org.codehaus.jackson.map.deser.std.BaseNodeDeserializer.deserializeArray(JsonNodeDeserializer.java:224)
> at org.codehaus.jackson.map.deser.std.BaseNodeDeserializer.deserializeObject(JsonNodeDeserializer.java:200)
> at org.codehaus.jackson.map.deser.std.JsonNodeDeserializer.deserialize(JsonNodeDeserializer.java:58)
> at org.codehaus.jackson.map.deser.std.JsonNodeDeserializer.deserialize(JsonNodeDeserializer.java:15)
> at org.codehaus.jackson.map.ObjectMapper._readValue(ObjectMapper.java:2704)
> at org.codehaus.jackson.map.ObjectMapper.readTree(ObjectMapper.java:1344)
> at org.apache.avro.Schema$Parser.parse(Schema.java:927)
> ... 21 more
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