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Posted to github@arrow.apache.org by GitBox <gi...@apache.org> on 2022/04/22 22:04:39 UTC
[GitHub] [arrow] jwijffels opened a new issue, #12965: looks like you
jwijffels opened a new issue, #12965:
URL: https://github.com/apache/arrow/issues/12965
looks like you have an issue with the CRAN R package, it should Import` tidyselect >= 1.0.0` as function `all_of ` was only available in tidyselect since `version >= 1.0.0`.
```
> install.packages("arrow")
...
trying URL 'https://cran.rstudio.com/src/contrib/arrow_7.0.0.tar.gz'
Content type 'application/x-gzip' length 4553836 bytes (4.3 MB)
==================================================
downloaded 4.3 MB
* installing *source* package ‘arrow’ ...
** package ‘arrow’ successfully unpacked and MD5 sums checked
** using staged installation
*** Using ubuntu-18.04 binary for ubuntu-20.04
*** No libarrow binary found for version 7.0.0 on ubuntu-18.04
*** Found local C++ source: 'tools/cpp'
*** Building libarrow from source
For a faster, more complete installation, set the environment variable NOT_CRAN=true before installing
See install vignette for details:
https://cran.r-project.org/web/packages/arrow/vignettes/install.html
**** arrow
PKG_CFLAGS=-I/tmp/RtmplH6DFO/R.INSTALL6cd10fc07509/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON
PKG_LIBS=-L/tmp/RtmplH6DFO/R.INSTALL6cd10fc07509/arrow/libarrow/arrow-7.0.0/lib -larrow_dataset -lparquet -larrow -larrow /usr/lib/x86_64-linux-gnu/libbz2.so -pthread -larrow_bundled_dependencies -lz -lzstd -larrow -larrow_bundled_dependencies -larrow_dataset -lparquet -lssl -lcrypto -lcurl
** libs
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmplH6DFO/R.INSTALL6cd10fc07509/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/data/home/xyz/R/x86_64-pc-linux-gnu-library/4.1/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-i2PIHO/r-base-4.1.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RTasks.cpp -o RTasks.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmplH6DFO/R.INSTALL6cd10fc07509/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/data/home/xyz/R/x86_64-pc-linux-gnu-library/4.1/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-i2PIHO/r-base-4.1.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c altrep.cpp -o altrep.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmplH6DFO/R.INSTALL6cd10fc07509/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/data/home/xyz/R/x86_64-pc-linux-gnu-library/4.1/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-i2PIHO/r-base-4.1.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c array.cpp -o array.o
...
g++ -std=gnu++11 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o arrow.so RTasks.o altrep.o array.o array_to_vector.o arraydata.o arrowExports.o bridge.o buffer.o chunkedarray.o compression.o compute-exec.o compute.o config.o csv.o dataset.o datatype.o expression.o feather.o field.o filesystem.o imports.o io.o json.o memorypool.o message.o parquet.o r_to_arrow.o recordbatch.o recordbatchreader.o recordbatchwriter.o scalar.o schema.o symbols.o table.o threadpool.o type_infer.o -L/tmp/RtmplH6DFO/R.INSTALL6cd10fc07509/arrow/libarrow/arrow-7.0.0/lib -larrow_dataset -lparquet -larrow -larrow /usr/lib/x86_64-linux-gnu/libbz2.so -pthread -larrow_bundled_dependencies -lz -lzstd -larrow -larrow_bundled_dependencies -larrow_dataset -lparquet -lssl -lcrypto -lcurl -L/usr/lib/R/lib -lR
installing to /data/home/xyz/R/x86_64-pc-linux-gnu-library/4.1/00LOCK-arrow/00new/arrow/libs
** R
** inst
** byte-compile and prepare package for lazy loading
Error: object ‘all_of’ is not exported by 'namespace:tidyselect'
Execution halted
ERROR: lazy loading failed for package ‘arrow’
* removing ‘/data/home/xyz/R/x86_64-pc-linux-gnu-library/4.1/arrow’
Warning in install.packages :
installation of package ‘arrow’ had non-zero exit status
The downloaded source packages are in
‘/tmp/Rtmp0npE28/downloaded_packages’
> installed.packages()["tidyselect", ]
Package LibPath
"tidyselect" "/usr/local/lib/R/site-library"
Version Priority
"0.2.5" NA
Depends Imports
"R (>= 3.1)" "glue (>= 1.3.0), purrr, rlang (>= 0.2.2), Rcpp (>= 0.12.0)"
LinkingTo Suggests
"Rcpp (>= 0.12.0)," "covr, dplyr, testthat"
Enhances License
NA "GPL-3"
License_is_FOSS License_restricts_use
NA NA
OS_type MD5sum
NA NA
NeedsCompilation Built
"yes" "4.1.2"
```
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[GitHub] [arrow] jwijffels commented on issue #12965: looks like you
Posted by GitBox <gi...@apache.org>.
jwijffels commented on issue #12965:
URL: https://github.com/apache/arrow/issues/12965#issuecomment-1107644959
https://github.com/apache/arrow/pull/12972
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[GitHub] [arrow] nealrichardson closed issue #12965: looks like you
Posted by GitBox <gi...@apache.org>.
nealrichardson closed issue #12965: looks like you
URL: https://github.com/apache/arrow/issues/12965
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[GitHub] [arrow] nealrichardson commented on issue #12965: looks like you
Posted by GitBox <gi...@apache.org>.
nealrichardson commented on issue #12965:
URL: https://github.com/apache/arrow/issues/12965#issuecomment-1107468655
Thanks for the report. Would you like to make a PR to specify `tidyselect >= 1.0.0`? Not denying your experience, but in practice I don't think it's a widespread concern because 1.0.0 was released over 2 years ago: https://github.com/r-lib/tidyselect/releases/tag/v1.0.0
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