You are viewing a plain text version of this content. The canonical link for it is here.
Posted to commits@airavata.apache.org by ma...@apache.org on 2018/02/16 15:08:55 UTC
[airavata] 01/02: Merge remote-tracking branch
'origin/registry-refactoring' into group-based-auth
This is an automated email from the ASF dual-hosted git repository.
machristie pushed a commit to branch group-based-auth
in repository https://gitbox.apache.org/repos/asf/airavata.git
commit 75ff81755b52c2263c63c26e238d0debed1c1964
Merge: 42f4553 47980a4
Author: Marcus Christie <ma...@apache.org>
AuthorDate: Fri Feb 16 09:56:25 2018 -0500
Merge remote-tracking branch 'origin/registry-refactoring' into group-based-auth
.../api/server/handler/AiravataServerHandler.java | 254 +
.../java/org/apache/airavata/api/Airavata.java | 77582 ++++++++++++-------
.../BatchQueueResourcePolicy.java | 987 +
.../ComputeResourcePolicy.java | 738 +
.../GroupAccountSSHProvisionerConfig.java | 689 +
.../GroupComputeResourcePreference.java | 2221 +
.../groupresourceprofile/GroupResourceProfile.java | 1285 +
modules/registry-refactoring/pom.xml | 142 +
.../airavata/registry/core/RegistryException.java | 22 +-
.../entities/appcatalog/AppEnvironmentEntity.java | 73 +
.../appcatalog/AppModuleMappingEntity.java | 51 +
.../entities/appcatalog/AppModuleMappingPK.java | 82 +
.../appcatalog/ApplicationDeploymentEntity.java | 151 +
.../appcatalog/ApplicationInputEntity.java | 161 +
.../entities/appcatalog/ApplicationInputPK.java | 82 +
.../appcatalog/ApplicationInterfaceEntity.java | 121 +
.../appcatalog/ApplicationModuleEntity.java | 119 +
.../appcatalog/ApplicationOutputEntity.java | 149 +
.../entities/appcatalog/ApplicationOutputPK.java | 82 +
.../core/entities/appcatalog/BatchQueueEntity.java | 205 +
.../core/entities/appcatalog/BatchQueuePK.java | 84 +
.../appcatalog/BatchQueueResourcePolicyEntity.java | 108 +
.../appcatalog/BatchQueueResourcePolicyPK.java | 43 +
.../appcatalog/CloudJobSubmissionEntity.java | 103 +
.../entities/appcatalog/ComputeResourceEntity.java | 256 +
.../ComputeResourceFileSystemEntity.java | 87 +
.../appcatalog/ComputeResourceFileSystemPK.java | 84 +
.../appcatalog/ComputeResourcePolicyEntity.java | 79 +
.../appcatalog/ComputeResourcePolicyPK.java | 43 +
.../ComputeResourcePreferenceEntity.java | 254 +
.../appcatalog/ComputeResourcePreferencePK.java | 83 +
.../appcatalog/DataMovementInterfaceEntity.java | 118 +
.../appcatalog/DataMovementInterfacePK.java | 84 +
.../entities/appcatalog/GatewayProfileEntity.java | 130 +
.../appcatalog/GlobusGkEndpointEntity.java | 53 +
.../entities/appcatalog/GlobusGkEndpointPK.java | 82 +
.../appcatalog/GlobusSubmissionEntity.java | 74 +
.../appcatalog/GridftpDataMovementEntity.java | 87 +
.../entities/appcatalog/GridftpEndpointEntity.java | 84 +
.../entities/appcatalog/GridftpEndpointPK.java | 81 +
.../appcatalog/GroupComputeResourcePrefEntity.java | 232 +
.../appcatalog/GroupComputeResourcePrefPK.java | 56 +
.../appcatalog/GroupResourceProfileEntity.java | 111 +
.../appcatalog/GroupResourceProfilePK.java | 44 +
.../GroupSSHAccountProvisionerConfig.java | 80 +
.../GroupSSHAccountProvisionerConfigPK.java | 80 +
.../entities/appcatalog/GsisshExportEntity.java | 50 +
.../core/entities/appcatalog/GsisshExportPK.java | 82 +
.../appcatalog/GsisshPostjobcommandEntity.java | 50 +
.../appcatalog/GsisshPostjobcommandPK.java | 80 +
.../appcatalog/GsisshPrejobcommandEntity.java | 51 +
.../entities/appcatalog/GsisshPrejobcommandPK.java | 82 +
.../appcatalog/GsisshSubmissionEntity.java | 96 +
.../appcatalog/JobManagerCommandEntity.java | 70 +
.../entities/appcatalog/JobManagerCommandPK.java | 81 +
.../appcatalog/JobSubmissionInterfaceEntity.java | 118 +
.../appcatalog/JobSubmissionInterfacePK.java | 83 +
.../appcatalog/LibraryApendPathEntity.java | 75 +
.../appcatalog/LibraryPrependPathEntity.java | 77 +
.../appcatalog/LocalDataMovementEntity.java | 52 +
.../entities/appcatalog/LocalSubmissionEntity.java | 105 +
.../appcatalog/ParallelismCommandEntity.java | 70 +
.../entities/appcatalog/ParallelismCommandPK.java | 81 +
.../entities/appcatalog/PostjobCommandEntity.java | 51 +
.../core/entities/appcatalog/PostjobCommandPK.java | 79 +
.../entities/appcatalog/PrejobCommandEntity.java | 51 +
.../core/entities/appcatalog/PrejobCommandPK.java | 82 +
.../appcatalog/ResourceJobManagerEntity.java | 107 +
.../SSHAccountProvisionerConfiguration.java | 98 +
.../SSHAccountProvisionerConfigurationPK.java | 67 +
.../entities/appcatalog/ScpDataMovementEntity.java | 119 +
.../appcatalog/SshJobSubmissionEntity.java | 140 +
.../appcatalog/StorageInterfaceEntity.java | 95 +
.../entities/appcatalog/StorageInterfacePK.java | 82 +
.../appcatalog/StoragePreferenceEntity.java | 106 +
.../entities/appcatalog/StoragePreferencePK.java | 83 +
.../entities/appcatalog/StorageResourceEntity.java | 105 +
.../appcatalog/UnicoreDatamovementEntity.java | 75 +
.../appcatalog/UnicoreSubmissionEntity.java | 75 +
.../ComputeResourceSchedulingEntity.java | 170 +
.../core/entities/expcatalog/ExperimentEntity.java | 224 +
.../entities/expcatalog/ExperimentErrorEntity.java | 118 +
.../entities/expcatalog/ExperimentErrorPK.java | 75 +
.../entities/expcatalog/ExperimentInputEntity.java | 174 +
.../entities/expcatalog/ExperimentInputPK.java | 74 +
.../expcatalog/ExperimentOutputEntity.java | 165 +
.../entities/expcatalog/ExperimentOutputPK.java | 74 +
.../expcatalog/ExperimentStatusEntity.java | 83 +
.../entities/expcatalog/ExperimentStatusPK.java | 74 +
.../core/entities/expcatalog/JobEntity.java | 165 +
.../core/entities/expcatalog/JobStatusEntity.java | 83 +
.../core/entities/expcatalog/JobStatusPK.java | 74 +
.../core/entities/expcatalog/ProcessEntity.java | 276 +
.../entities/expcatalog/ProcessErrorEntity.java | 118 +
.../core/entities/expcatalog/ProcessErrorPK.java | 75 +
.../entities/expcatalog/ProcessInputEntity.java | 174 +
.../core/entities/expcatalog/ProcessInputPK.java | 74 +
.../entities/expcatalog/ProcessOutputEntity.java | 165 +
.../core/entities/expcatalog/ProcessOutputPK.java | 70 +
.../ProcessResourceSchedulingEntity.java | 170 +
.../entities/expcatalog/ProcessStatusEntity.java | 83 +
.../core/entities/expcatalog/ProcessStatusPK.java | 74 +
.../core/entities/expcatalog/TaskEntity.java | 147 +
.../core/entities/expcatalog/TaskErrorEntity.java | 118 +
.../core/entities/expcatalog/TaskErrorPK.java | 75 +
.../core/entities/expcatalog/TaskStatusEntity.java | 83 +
.../core/entities/expcatalog/TaskStatusPK.java | 74 +
.../expcatalog/UserConfigurationEntity.java | 131 +
.../entities/replicacatalog/DataProductEntity.java | 165 +
.../replicacatalog/DataProductMetadataEntity.java | 85 +
.../DataProductMetadataEntityPK.java | 70 +
.../replicacatalog/DataReplicaLocationEntity.java | 153 +
.../replicacatalog/DataReplicaMetadataEntity.java | 85 +
.../DataReplicaMetadataEntityPK.java | 70 +
.../workflowcatalog/ComponentStatusEntity.java | 97 +
.../core/entities/workflowcatalog/EdgeEntity.java | 105 +
.../core/entities/workflowcatalog/EdgePK.java | 81 +
.../core/entities/workflowcatalog/NodeEntity.java | 127 +
.../core/entities/workflowcatalog/NodePK.java | 81 +
.../core/entities/workflowcatalog/PortEntity.java | 106 +
.../core/entities/workflowcatalog/PortPK.java | 82 +
.../entities/workflowcatalog/WorkflowEntity.java | 143 +
.../workflowcatalog/WorkflowInputEntity.java | 173 +
.../entities/workflowcatalog/WorkflowInputPK.java | 85 +
.../workflowcatalog/WorkflowOutputEntity.java | 160 +
.../entities/workflowcatalog/WorkflowOutputPK.java | 82 +
.../workflowcatalog/WorkflowStatusEntity.java | 96 +
.../entities/workflowcatalog/WorkflowStatusPK.java | 81 +
.../entities/workspacecatalog/GatewayEntity.java | 221 +
.../workspacecatalog/NSFDemographicsEntity.java | 94 +
.../workspacecatalog/NotificationEntity.java | 110 +
.../entities/workspacecatalog/ProjectEntity.java | 92 +
.../workspacecatalog/UserProfileEntity.java | 247 +
.../core/repositories/AbstractRepository.java | 98 +
.../appcatalog/AppCatAbstractRepository.java | 132 +
.../appcatalog/BatchQueuePolicyRepository.java | 15 +
.../appcatalog/BatchQueueRepository.java | 12 +
.../ComputeResourcePolicyRepository.java | 15 +
.../appcatalog/ComputeResourcePrefRepository.java | 32 +
.../appcatalog/ComputeResourceRepository.java | 468 +
.../appcatalog/DataMovementRepository.java | 25 +
.../appcatalog/GroupResourceProfileRepository.java | 127 +
.../appcatalog/GrpComputePrefRepository.java | 15 +
.../appcatalog/GwyResourceProfileRepository.java | 182 +
.../JobSubmissionInterfaceRepository.java | 28 +
.../appcatalog/ResourceJobManagerRepository.java | 91 +
.../appcatalog/StoragePrefRepository.java | 13 +
.../expcatalog/ExperimentRepository.java | 101 +
.../replicacatalog/DataProductRepository.java | 31 +
.../DataReplicaLocationRepository.java | 31 +
.../workflowcatalog/ComponentStatusRepository.java | 37 +
.../workflowcatalog/EdgeRepository.java | 38 +
.../workflowcatalog/NodeRepository.java | 38 +
.../workflowcatalog/PortRepository.java | 37 +
.../workflowcatalog/WorkflowRepository.java | 37 +
.../workflowcatalog/WorkflowStatusRepository.java | 37 +
.../workspacecatalog/GatewayRepository.java | 36 +
.../workspacecatalog/NotificationRepository.java | 35 +
.../workspacecatalog/ProjectRepository.java | 35 +
.../workspacecatalog/UserProfileRepository.java | 72 +
.../registry/core/utils/AppCatalogUtils.java | 25 +-
.../airavata/registry/core/utils/Committer.java | 21 +-
.../airavata/registry/core/utils/DBConstants.java | 29 +
.../core/utils/JPAUtil/AppCatalogJPAUtils.java | 67 +
.../airavata/registry/core/utils/JPAUtils.java | 82 +
.../registry/core/utils/ObjectMapperSingleton.java | 39 +
.../registry/core/utils/QueryConstants.java | 40 +
.../src/main/resources/META-INF/persistence.xml | 127 +
.../src/main/resources/appcatalog-derby.sql | 658 +
.../src/main/resources/appcatalog-mysql.sql | 654 +
.../src/main/resources/experiment_catalog.sql | 285 +
.../src/main/resources/workspace_catalog.sql | 125 +
.../repositories/ExperimentRepositoryTest.java | 157 +
.../repositories/ReplicaCatalogRepositoryTest.java | 130 +
.../core/repositories/WorkflowRepositoryTest.java | 132 +
.../core/repositories/WorkspaceRepositoryTest.java | 279 +
.../appcatalog/ComputeResourceRepositoryTest.java | 230 +
.../appcatalog/GatewayProfileRepositoryTest.java | 130 +
.../GroupResourceProfileRepositoryTest.java | 206 +
.../core/repositories/util/Initialize.java | 318 +
.../registry-server/registry-api-service/pom.xml | 5 +
.../api/service/handler/RegistryServerHandler.java | 517 +-
.../airavata/registry/api/RegistryService.java | 18878 ++++-
.../client/UserProfileServiceClientFactory.java | 43 -
pom.xml | 1 +
.../airavata-apis/airavata_api.thrift | 86 +
.../component-cpis/registry-api.thrift | 48 +
.../group_resource_profile_model.thrift | 103 +
.../resource_catalog_models.thrift | 3 +-
189 files changed, 90739 insertions(+), 31382 deletions(-)
--
To stop receiving notification emails like this one, please contact
machristie@apache.org.