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Posted to issues@beam.apache.org by "ASF GitHub Bot (Jira)" <ji...@apache.org> on 2021/10/04 17:28:00 UTC
[jira] [Work logged] (BEAM-10708) InteractiveRunner cannot execute
pipeline with cross-language transform
[ https://issues.apache.org/jira/browse/BEAM-10708?focusedWorklogId=659734&page=com.atlassian.jira.plugin.system.issuetabpanels:worklog-tabpanel#worklog-659734 ]
ASF GitHub Bot logged work on BEAM-10708:
-----------------------------------------
Author: ASF GitHub Bot
Created on: 04/Oct/21 17:27
Start Date: 04/Oct/21 17:27
Worklog Time Spent: 10m
Work Description: KevinGG opened a new pull request #15647:
URL: https://github.com/apache/beam/pull/15647
1. Added an additional beam_sql option to specify a runner.
2. Added a sql_chain module to track chained beam_sql magics and produce
pipelines for execution when a non-direct runner is specified.
3. Added logic to load schemas defined in main session without relying
on save_main_session that might fail.
4. Added a OptionsForm class and DataflowOptionsForm subclass to guide
users through pipeline options configuration in notebooks.
5. Removed is_namedtuple utility and honor the Beam common utility
match_is_named_tuple. Note dill does not preserve __annotations__
across multiple main sessions. Added a workaround until cloudpickle
replaces dill in Beam.
------------------------
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`ValidatesRunner` compliance status (on master branch)
--------------------------------------------------------
<table>
<thead>
<tr>
<th>Lang</th>
<th>ULR</th>
<th>Dataflow</th>
<th>Flink</th>
<th>Samza</th>
<th>Spark</th>
<th>Twister2</th>
</tr>
</thead>
<tbody>
<tr>
<td>Go</td>
<td>---</td>
<td>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Go/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Go/lastCompletedBuild/badge/icon">
</a>
<td>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Go_VR_Flink/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Go_VR_Flink/lastCompletedBuild/badge/icon">
</a>
</td>
<td>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Go_VR_Samza/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Go_VR_Samza/lastCompletedBuild/badge/icon">
</a>
</td>
<td>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Go_VR_Spark/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Go_VR_Spark/lastCompletedBuild/badge/icon">
</a>
</td>
<td>---</td>
</tr>
<tr>
<td>Java</td>
<td>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_ULR/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_ULR/lastCompletedBuild/badge/icon">
</a>
</td>
<td>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Dataflow/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Dataflow/lastCompletedBuild/badge/icon?subject=V1">
</a><br>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Dataflow_Streaming/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Dataflow_Streaming/lastCompletedBuild/badge/icon?subject=V1+Streaming">
</a><br>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Dataflow_Java11/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Dataflow_Java11/lastCompletedBuild/badge/icon?subject=V1+Java+11">
</a><br>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Java_VR_Dataflow_V2/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Java_VR_Dataflow_V2/lastCompletedBuild/badge/icon?subject=V2">
</a><br>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Java_VR_Dataflow_V2_Streaming/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Java_VR_Dataflow_V2_Streaming/lastCompletedBuild/badge/icon?subject=V2+Streaming">
</a><br>
</td>
<td>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Flink/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Flink/lastCompletedBuild/badge/icon?subject=Java+8">
</a><br>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Flink_Java11/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Flink_Java11/lastCompletedBuild/badge/icon?subject=Java+11">
</a><br>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Java_PVR_Flink_Batch/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Java_PVR_Flink_Batch/lastCompletedBuild/badge/icon?subject=Portable">
</a><br>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Java_PVR_Flink_Streaming/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Java_PVR_Flink_Streaming/lastCompletedBuild/badge/icon?subject=Portable+Streaming">
</a>
</td>
<td>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Samza/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Samza/lastCompletedBuild/badge/icon">
</a><br>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Java_PVR_Samza/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Java_PVR_Samza/lastCompletedBuild/badge/icon?subject=Portable">
</a>
</td>
<td>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Spark/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Spark/lastCompletedBuild/badge/icon">
</a><br>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Java_PVR_Spark_Batch/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Java_PVR_Spark_Batch/lastCompletedBuild/badge/icon?subject=Portable">
</a><br>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_SparkStructuredStreaming/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_SparkStructuredStreaming/lastCompletedBuild/badge/icon?subject=Structured+Streaming">
</a>
</td>
<td>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Twister2/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Twister2/lastCompletedBuild/badge/icon">
</a>
</td>
</tr>
<tr>
<td>Python</td>
<td>---</td>
<td>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Py_VR_Dataflow/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Py_VR_Dataflow/lastCompletedBuild/badge/icon?subject=V1">
</a><br>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Py_VR_Dataflow_V2/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Py_VR_Dataflow_V2/lastCompletedBuild/badge/icon?subject=V2">
</a><br>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Py_ValCont/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Py_ValCont/lastCompletedBuild/badge/icon?subject=ValCont">
</a>
</td>
<td>
<a href="https://ci-beam.apache.org/job/beam_PreCommit_Python_PVR_Flink_Cron/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PreCommit_Python_PVR_Flink_Cron/lastCompletedBuild/badge/icon?subject=Portable">
</a><br>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Python_VR_Flink/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Python_VR_Flink/lastCompletedBuild/badge/icon">
</a>
</td>
<td>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Python_VR_Samza/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Python_VR_Samza/lastCompletedBuild/badge/icon">
</a>
</td>
<td>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Python_VR_Spark/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Python_VR_Spark/lastCompletedBuild/badge/icon">
</a>
</td>
<td>---</td>
</tr>
<tr>
<td>XLang</td>
<td>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_XVR_Direct/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_XVR_Direct/lastCompletedBuild/badge/icon">
</a>
</td>
<td>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_XVR_Dataflow/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_XVR_Dataflow/lastCompletedBuild/badge/icon">
</a>
</td>
<td>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_XVR_Flink/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_XVR_Flink/lastCompletedBuild/badge/icon">
</a>
</td>
<td>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_XVR_Samza/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_XVR_Samza/lastCompletedBuild/badge/icon">
</a>
</td>
<td>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_XVR_Spark/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_XVR_Spark/lastCompletedBuild/badge/icon">
</a>
</td>
<td>---</td>
</tr>
</tbody>
</table>
Examples testing status on various runners
--------------------------------------------------------
<table>
<thead>
<tr>
<th>Lang</th>
<th>ULR</th>
<th>Dataflow</th>
<th>Flink</th>
<th>Samza</th>
<th>Spark</th>
<th>Twister2</th>
</tr>
</thead>
<tbody>
<tr>
<td>Go</td>
<td>---</td>
<td>---</td>
<td>---</td>
<td>---</td>
<td>---</td>
<td>---</td>
<td>---</td>
</tr>
<tr>
<td>Java</td>
<td>---</td>
<td>
<a href="https://ci-beam.apache.org/job/beam_PreCommit_Java_Examples_Dataflow_Cron/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PreCommit_Java_Examples_Dataflow_Cron/lastCompletedBuild/badge/icon?subject=V1">
</a><br>
<a href="https://ci-beam.apache.org/job/beam_PreCommit_Java_Examples_Dataflow_Java11_Cron/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PreCommit_Java_Examples_Dataflow_Java11_Cron/lastCompletedBuild/badge/icon?subject=V1+Java11">
</a><br>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Java_Examples_Dataflow_V2/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Java_Examples_Dataflow_V2/lastCompletedBuild/badge/icon?subject=V2">
</a><br>
</td>
<td>---</td>
<td>---</td>
<td>---</td>
<td>---</td>
<td>---</td>
</tr>
<tr>
<td>Python</td>
<td>---</td>
<td>---</td>
<td>---</td>
<td>---</td>
<td>---</td>
<td>---</td>
<td>---</td>
</tr>
<tr>
<td>XLang</td>
<td>---</td>
<td>---</td>
<td>---</td>
<td>---</td>
<td>---</td>
<td>---</td>
<td>---</td>
</tr>
</tbody>
</table>
Post-Commit SDK/Transform Integration Tests Status (on master branch)
------------------------------------------------------------------------------------------------
<table>
<thead>
<tr>
<th>Go</th>
<th>Java</th>
<th>Python</th>
</tr>
</thead>
<tbody>
<tr>
<td>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Go/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Go/lastCompletedBuild/badge/icon">
</a>
</td>
<td>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Java/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Java/lastCompletedBuild/badge/icon">
</a>
</td>
<td>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Python36/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Python36/lastCompletedBuild/badge/icon?subject=3.6">
</a><br>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Python37/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Python37/lastCompletedBuild/badge/icon?subject=3.7">
</a><br>
<a href="https://ci-beam.apache.org/job/beam_PostCommit_Python38/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PostCommit_Python38/lastCompletedBuild/badge/icon?subject=3.8">
</a>
</td>
</tr>
</tbody>
</table>
Pre-Commit Tests Status (on master branch)
------------------------------------------------------------------------------------------------
<table>
<thead>
<tr>
<th>---</th>
<th>Java</th>
<th>Python</th>
<th>Go</th>
<th>Website</th>
<th>Whitespace</th>
<th>Typescript</th>
</tr>
</thead>
<tbody>
<tr>
<td>Non-portable</td>
<td>
<a href="https://ci-beam.apache.org/job/beam_PreCommit_Java_Cron/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PreCommit_Java_Cron/lastCompletedBuild/badge/icon">
</a><br>
</td>
<td>
<a href="https://ci-beam.apache.org/job/beam_PreCommit_Python_Cron/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PreCommit_Python_Cron/lastCompletedBuild/badge/icon?subject=Tests">
</a><br>
<a href="https://ci-beam.apache.org/job/beam_PreCommit_PythonLint_Cron/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PreCommit_PythonLint_Cron/lastCompletedBuild/badge/icon?subject=Lint">
</a><br>
<a href="https://ci-beam.apache.org/job/beam_PreCommit_PythonDocker_Cron/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PreCommit_PythonDocker_Cron/badge/icon?subject=Docker">
</a><br>
<a href="https://ci-beam.apache.org/job/beam_PreCommit_PythonDocs_Cron/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PreCommit_PythonDocs_Cron/badge/icon?subject=Docs">
</a>
</td>
<td>
<a href="https://ci-beam.apache.org/job/beam_PreCommit_Go_Cron/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PreCommit_Go_Cron/lastCompletedBuild/badge/icon">
</a>
</td>
<td>
<a href="https://ci-beam.apache.org/job/beam_PreCommit_Website_Cron/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PreCommit_Website_Cron/lastCompletedBuild/badge/icon">
</a>
</td>
<td>
<a href="https://ci-beam.apache.org/job/beam_PreCommit_Whitespace_Cron/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PreCommit_Whitespace_Cron/lastCompletedBuild/badge/icon">
</a>
</td>
<td>
<a href="https://ci-beam.apache.org/job/beam_PreCommit_Typescript_Cron/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PreCommit_Typescript_Cron/lastCompletedBuild/badge/icon">
</a>
</td>
</tr>
<tr>
<td>Portable</td>
<td>---</td>
<td>
<a href="https://ci-beam.apache.org/job/beam_PreCommit_Portable_Python_Cron/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PreCommit_Portable_Python_Cron/lastCompletedBuild/badge/icon">
</a>
</td>
<td>
<a href="https://ci-beam.apache.org/job/beam_PreCommit_GoPortable_Cron/lastCompletedBuild/">
<img alt="Build Status" src="https://ci-beam.apache.org/job/beam_PreCommit_GoPortable_Cron/lastCompletedBuild/badge/icon">
</a>
</td>
<td>---</td>
<td>---</td>
<td>---</td>
</tr>
</tbody>
</table>
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Issue Time Tracking
-------------------
Worklog Id: (was: 659734)
Time Spent: 43h 50m (was: 43h 40m)
> InteractiveRunner cannot execute pipeline with cross-language transform
> -----------------------------------------------------------------------
>
> Key: BEAM-10708
> URL: https://issues.apache.org/jira/browse/BEAM-10708
> Project: Beam
> Issue Type: Bug
> Components: cross-language
> Reporter: Brian Hulette
> Assignee: Ning
> Priority: P2
> Time Spent: 43h 50m
> Remaining Estimate: 0h
>
> The InteractiveRunner crashes when given a pipeline that includes a cross-language transform.
> Here's the example I tried to run in a jupyter notebook:
> {code:python}
> p = beam.Pipeline(InteractiveRunner())
> pc = (p | SqlTransform("""SELECT
> CAST(1 AS INT) AS `id`,
> CAST('foo' AS VARCHAR) AS `str`,
> CAST(3.14 AS DOUBLE) AS `flt`"""))
> df = interactive_beam.collect(pc)
> {code}
> The problem occurs when [pipeline_fragment.py|https://github.com/apache/beam/blob/dce1eb83b8d5137c56ac58568820c24bd8fda526/sdks/python/apache_beam/runners/interactive/pipeline_fragment.py#L66] creates a copy of the pipeline by [writing it to proto and reading it back|https://github.com/apache/beam/blob/dce1eb83b8d5137c56ac58568820c24bd8fda526/sdks/python/apache_beam/runners/interactive/pipeline_fragment.py#L120]. Reading it back fails because some of the pipeline is not written in Python.
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