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Posted to issues@flink.apache.org by "boshu Zheng (JIRA)" <ji...@apache.org> on 2018/12/14 09:47:00 UTC
[jira] [Assigned] (FLINK-10615) Cancel with savepoint can fail the
job
[ https://issues.apache.org/jira/browse/FLINK-10615?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
boshu Zheng reassigned FLINK-10615:
-----------------------------------
Assignee: (was: boshu Zheng)
> Cancel with savepoint can fail the job
> --------------------------------------
>
> Key: FLINK-10615
> URL: https://issues.apache.org/jira/browse/FLINK-10615
> Project: Flink
> Issue Type: Bug
> Components: Distributed Coordination, State Backends, Checkpointing
> Affects Versions: 1.5.4, 1.6.1, 1.7.0
> Environment: *Rev:* e96cdf12d6ff42079b39f5ef8966258e60083b48
> Reporter: Gary Yao
> Priority: Major
> Fix For: 1.8.0
>
>
> *Description*
> Cancelling a job with a savepoint can lead to a job failure, if {{failOnCheckpointingErrors}} is set to {{true}} in the checkpoint config.
> *Analysis*
> # The checkpoint scheduler gets stopped before taking the savepoint to ensure that no additional checkpoints are taken afterwards.
> # All pending checkpoints are aborted, which leads to disposal of all the data at the checkpoint storage location.
> # Job fails because the pending checkpoint cannot be finalized (see Stacktrace).
> *Stacktrace*
> {noformat}
> 2018-10-19 13:19:49,960 INFO org.apache.flink.runtime.executiongraph.ExecutionGraph - Job General purpose test job (a6f8f88c8875b83c25da2a6c15aba0a9) switched from state RUNNING to FAILING.
> AsynchronousException\{java.lang.Exception: Could not materialize checkpoint 4 for operator Source: Custom Source -> Timestamps/Watermarks (1/1).}
> at org.apache.flink.streaming.runtime.tasks.StreamTask$AsyncCheckpointExceptionHandler.tryHandleCheckpointException(StreamTask.java:1153)
> at org.apache.flink.streaming.runtime.tasks.StreamTask$AsyncCheckpointRunnable.handleExecutionException(StreamTask.java:947)
> at org.apache.flink.streaming.runtime.tasks.StreamTask$AsyncCheckpointRunnable.run(StreamTask.java:884)
> at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
> at java.util.concurrent.FutureTask.run(FutureTask.java:266)
> at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
> at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
> at java.lang.Thread.run(Thread.java:748)
> Caused by: java.lang.Exception: Could not materialize checkpoint 4 for operator Source: Custom Source -> Timestamps/Watermarks (1/1).
> at org.apache.flink.streaming.runtime.tasks.StreamTask$AsyncCheckpointRunnable.handleExecutionException(StreamTask.java:942)
> ... 6 more
> Caused by: java.util.concurrent.ExecutionException: java.io.IOException: Could not flush and close the file system output stream to hdfs:/checkpoints/a6f8f88c8875b83c25da2a6c15aba0a9/chk-4/d74c1116-c
> de0-4ab3-a180-204164a0f413 in order to obtain the stream state handle
> at java.util.concurrent.FutureTask.report(FutureTask.java:122)
> at java.util.concurrent.FutureTask.get(FutureTask.java:192)
> at org.apache.flink.util.FutureUtil.runIfNotDoneAndGet(FutureUtil.java:53)
> at org.apache.flink.streaming.api.operators.OperatorSnapshotFinalizer.<init>(OperatorSnapshotFinalizer.java:53)
> at org.apache.flink.streaming.runtime.tasks.StreamTask$AsyncCheckpointRunnable.run(StreamTask.java:853)
> ... 5 more
> Caused by: java.io.IOException: Could not flush and close the file system output stream to hdfs:/checkpoints/a6f8f88c8875b83c25da2a6c15aba0a9/chk-4/d74c1116-cde0-4ab3-a180-204164a0f413 in order to ob
> tain the stream state handle
> at org.apache.flink.runtime.state.filesystem.FsCheckpointStreamFactory$FsCheckpointStateOutputStream.closeAndGetHandle(FsCheckpointStreamFactory.java:326)
> at org.apache.flink.runtime.state.DefaultOperatorStateBackend$DefaultOperatorStateBackendSnapshotStrategy$1.callInternal(DefaultOperatorStateBackend.java:823)
> at org.apache.flink.runtime.state.DefaultOperatorStateBackend$DefaultOperatorStateBackendSnapshotStrategy$1.callInternal(DefaultOperatorStateBackend.java:752)
> at org.apache.flink.runtime.state.AsyncSnapshotCallable.call(AsyncSnapshotCallable.java:76)
> at java.util.concurrent.FutureTask.run(FutureTask.java:266)
> at org.apache.flink.util.FutureUtil.runIfNotDoneAndGet(FutureUtil.java:50)
> ... 7 more
> Caused by: org.apache.hadoop.ipc.RemoteException(java.io.FileNotFoundException): File does not exist: /checkpoints/a6f8f88c8875b83c25da2a6c15aba0a9/chk-4/d74c1116-cde0-4ab3-a180-204164a0f413 (inode 9
> 55932) Holder DFSClient_NONMAPREDUCE_-869828808_46 does not have any open files.
> at org.apache.hadoop.hdfs.server.namenode.FSNamesystem.checkLease(FSNamesystem.java:2673)
> at org.apache.hadoop.hdfs.server.namenode.FSDirWriteFileOp.completeFileInternal(FSDirWriteFileOp.java:621)
> at org.apache.hadoop.hdfs.server.namenode.FSDirWriteFileOp.completeFile(FSDirWriteFileOp.java:601)
> at org.apache.hadoop.hdfs.server.namenode.FSNamesystem.completeFile(FSNamesystem.java:2717)
> at org.apache.hadoop.hdfs.server.namenode.NameNodeRpcServer.complete(NameNodeRpcServer.java:882)
> at org.apache.hadoop.hdfs.protocolPB.ClientNamenodeProtocolServerSideTranslatorPB.complete(ClientNamenodeProtocolServerSideTranslatorPB.java:556)
> at org.apache.hadoop.hdfs.protocol.proto.ClientNamenodeProtocolProtos$ClientNamenodeProtocol$2.callBlockingMethod(ClientNamenodeProtocolProtos.java)
> at org.apache.hadoop.ipc.ProtobufRpcEngine$Server$ProtoBufRpcInvoker.call(ProtobufRpcEngine.java:447)
> at org.apache.hadoop.ipc.RPC$Server.call(RPC.java:989)
> at org.apache.hadoop.ipc.Server$RpcCall.run(Server.java:850)
> at org.apache.hadoop.ipc.Server$RpcCall.run(Server.java:793)
> at java.security.AccessController.doPrivileged(Native Method)
> at javax.security.auth.Subject.doAs(Subject.java:422)
> at org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1840)
> at org.apache.hadoop.ipc.Server$Handler.run(Server.java:2489)
> at org.apache.hadoop.ipc.Client.getRpcResponse(Client.java:1489)
> at org.apache.hadoop.ipc.Client.call(Client.java:1435)
> at org.apache.hadoop.ipc.Client.call(Client.java:1345)
> at org.apache.hadoop.ipc.ProtobufRpcEngine$Invoker.invoke(ProtobufRpcEngine.java:227)
> at org.apache.hadoop.ipc.ProtobufRpcEngine$Invoker.invoke(ProtobufRpcEngine.java:116)
> at com.sun.proxy.$Proxy17.complete(Unknown Source)
> at org.apache.hadoop.hdfs.protocolPB.ClientNamenodeProtocolTranslatorPB.complete(ClientNamenodeProtocolTranslatorPB.java:484)
> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
> at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
> at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
> at java.lang.reflect.Method.invoke(Method.java:498)
> at org.apache.hadoop.io.retry.RetryInvocationHandler.invokeMethod(RetryInvocationHandler.java:409)
> at org.apache.hadoop.io.retry.RetryInvocationHandler$Call.invokeMethod(RetryInvocationHandler.java:163)
> at org.apache.hadoop.io.retry.RetryInvocationHandler$Call.invoke(RetryInvocationHandler.java:155)
> at org.apache.hadoop.io.retry.RetryInvocationHandler$Call.invokeOnce(RetryInvocationHandler.java:95)
> at org.apache.hadoop.io.retry.RetryInvocationHandler.invoke(RetryInvocationHandler.java:346)
> at com.sun.proxy.$Proxy18.complete(Unknown Source)
> at org.apache.hadoop.hdfs.DFSOutputStream.completeFile(DFSOutputStream.java:908)
> at org.apache.hadoop.hdfs.DFSOutputStream.completeFile(DFSOutputStream.java:867)
> at org.apache.hadoop.hdfs.DFSOutputStream.closeImpl(DFSOutputStream.java:850)
> at org.apache.hadoop.hdfs.DFSOutputStream.close(DFSOutputStream.java:805)
> at org.apache.hadoop.fs.FSDataOutputStream$PositionCache.close(FSDataOutputStream.java:72)
> at org.apache.hadoop.fs.FSDataOutputStream.close(FSDataOutputStream.java:106)
> at org.apache.flink.runtime.fs.hdfs.HadoopDataOutputStream.close(HadoopDataOutputStream.java:52)
> at org.apache.flink.core.fs.ClosingFSDataOutputStream.close(ClosingFSDataOutputStream.java:64)
> at org.apache.flink.runtime.state.filesystem.FsCheckpointStreamFactory$FsCheckpointStateOutputStream.closeAndGetHandle(FsCheckpointStreamFactory.java:312)
> ... 12 more
> {noformat}
> *How to reproduce*
> # Submit {{DataStreamAllroundTestProgram}} from {{flink-end-to-end-tests}}
> # Invoke cancel with savepoint from CLI
> {code}
> bin/flink cancel -s hdfs:///[...]
> {code}
> # Repeat until cancel fails with the above exception.
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