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Posted to hdfs-user@hadoop.apache.org by "SRIKANTH KOMMINENI (RIT Student)" <sx...@rit.edu> on 2012/04/12 09:10:51 UTC

unable to resolve the heap space error even when running the examples

Hello,

I have searched a lot and still cant find any solution that can fix my
problem.

I am using the the basic downloaded version of hadoop-1.0.2 and I have
edited only what has been asked in the setup page of hadoop and I have set
it up to work in a pseudo random distributed mode.

My JAVA_HOME is set to /usr/lib/jvm/java-6-sun, I tried editing the heap
size in hadoop-env.sh that didn't work. I tried setting the CHILD_OPTS
that didn't work, I found that there was another hadoop-env.sh in
/etc/hadoop/ as per the recommendations in the mailing
list archives that didn't work . I tried increasing the  io.sort.mb
that didn't work. I am totally frustrated but it still doesn't work.please
help.


-- 
Srikanth Kommineni,
Graduate Assistant,
Dept of Computer Science,
Rochester Institute of Technology.




-- 
Srikanth Kommineni,
Graduate Assistant,
Dept of Computer Science,
Rochester Institute of Technology.




-- 
Srikanth Kommineni,
Graduate Assistant,
Dept of Computer Science,
Rochester Institute of Technology.

Re: unable to resolve the heap space error even when running the examples

Posted by "SRIKANTH KOMMINENI (RIT Student)" <sx...@rit.edu>.
Thanks your help , I finally am able to run my program and I still dont
have a clue why I was having that issue.
I just removed everything that had to do with hadoop and started working a
fresh copy of hadoop and it just worked.

On Thu, Apr 12, 2012 at 11:56 AM, SRIKANTH KOMMINENI (RIT Student) <
sxk7699@rit.edu> wrote:

> The following is the error that i get
>
>
>  bin/hadoop jar hadoop-examples-*.jar grep input output 'dfs[a-z.]+'
> 12/04/11 23:52:50 INFO util.NativeCodeLoader: Loaded the native-hadoop
> library
> 12/04/11 23:52:50 WARN mapred.JobClient: No job jar file set.  User
> classes may not be found. See JobConf(Class) or JobConf#setJar(String).
> 12/04/11 23:52:50 WARN snappy.LoadSnappy: Snappy native library not loaded
> 12/04/11 23:52:50 INFO mapred.FileInputFormat: Total input paths to
> process : 7
> 12/04/11 23:52:51 INFO mapred.JobClient: Running job: job_local_0001
> 12/04/11 23:52:51 INFO util.ProcessTree: setsid exited with exit code 0
> 12/04/11 23:52:51 INFO mapred.Task:  Using ResourceCalculatorPlugin :
> org.apache.hadoop.util.LinuxResourceCalculatorPlugin@59a34
> 12/04/11 23:52:51 INFO mapred.MapTask: numReduceTasks: 1
> 12/04/11 23:52:51 INFO mapred.MapTask: io.sort.mb = 100
> 12/04/11 23:52:51 WARN mapred.LocalJobRunner: job_local_0001
> java.lang.OutOfMemoryError: Java heap space
> at
> org.apache.hadoop.mapred.MapTask$MapOutputBuffer.<init>(MapTask.java:949)
>  at org.apache.hadoop.mapred.MapTask.runOldMapper(MapTask.java:428)
> at org.apache.hadoop.mapred.MapTask.run(MapTask.java:372)
>  at
> org.apache.hadoop.mapred.LocalJobRunner$Job.run(LocalJobRunner.java:212)
> 12/04/11 23:52:52 INFO mapred.JobClient:  map 0% reduce 0%
> 12/04/11 23:52:52 INFO mapred.JobClient: Job complete: job_local_0001
> 12/04/11 23:52:52 INFO mapred.JobClient: Counters: 0
> 12/04/11 23:52:52 INFO mapred.JobClient: Job Failed: NA
> java.io.IOException: Job failed!
> at org.apache.hadoop.mapred.JobClient.runJob(JobClient.java:1265)
>  at org.apache.hadoop.examples.Grep.run(Grep.java:69)
> at org.apache.hadoop.util.ToolRunner.run(ToolRunner.java:65)
>  at org.apache.hadoop.examples.Grep.main(Grep.java:93)
> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>  at
> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
> at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
>  at java.lang.reflect.Method.invoke(Method.java:597)
> at
> org.apache.hadoop.util.ProgramDriver$ProgramDescription.invoke(ProgramDriver.java:68)
>  at org.apache.hadoop.util.ProgramDriver.driver(ProgramDriver.java:139)
> at org.apache.hadoop.examples.ExampleDriver.main(ExampleDriver.java:64)
>  at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
> at
> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
>  at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
> at java.lang.reflect.Method.invoke(Method.java:597)
>  at org.apache.hadoop.util.RunJar.main(RunJar.java:156)
>
>
> On Thu, Apr 12, 2012 at 10:37 AM, Mapred Learn <ma...@gmail.com>wrote:
>
>> Can u share ur error also ?
>>
>> Sent from my iPhone
>>
>> On Apr 12, 2012, at 7:16 AM, Marcos Ortiz <ml...@uci.cu> wrote:
>>
>> Can you show to us the logs of your NN/DN?
>>
>> On 04/12/2012 03:28 AM, SRIKANTH KOMMINENI (RIT Student) wrote:
>>
>> Tried that it didn't work for a lot of combinations of values
>>
>> On Thu, Apr 12, 2012 at 3:25 AM, Mapred Learn < <ma...@gmail.com>
>> mapred.learn@gmail.com> wrote:
>>
>>>  Try exporting HADOOP_HEAPSIZE to bigger value like 1500 (1.5 gb)
>>> before running program or change it in hadoop-env.sh
>>>
>>>  If still gives error, u can try with bigger value.
>>>
>>> Sent from my iPhone
>>>
>>> On Apr 12, 2012, at 12:10 AM, "SRIKANTH KOMMINENI (RIT Student)" <<s...@rit.edu>
>>> sxk7699@rit.edu> wrote:
>>>
>>>    Hello,
>>>
>>>  I have searched a lot and still cant find any solution that can fix my
>>> problem.
>>>
>>>  I am using the the basic downloaded version of hadoop-1.0.2 and I have
>>> edited only what has been asked in the setup page of hadoop and I have set
>>> it up to work in a pseudo random distributed mode.
>>>
>>>  My JAVA_HOME is set to /usr/lib/jvm/java-6-sun, I tried editing the
>>> heap size in hadoop-env.sh that didn't work. I tried setting the CHILD_OPTS
>>> that didn't work, I found that there was another hadoop-env.sh in
>>> /etc/hadoop/ as per the recommendations in the mailing
>>> list archives that didn't work . I tried increasing the  io.sort.mb
>>> that didn't work. I am totally frustrated but it still doesn't work.please
>>> help.
>>>
>>>
>>>  --
>>> Srikanth Kommineni,
>>> Graduate Assistant,
>>> Dept of Computer Science,
>>> Rochester Institute of Technology.
>>>
>>>
>>>
>>>
>>>  --
>>> Srikanth Kommineni,
>>> Graduate Assistant,
>>> Dept of Computer Science,
>>> Rochester Institute of Technology.
>>>
>>>
>>>
>>>
>>>  --
>>> Srikanth Kommineni,
>>> Graduate Assistant,
>>> Dept of Computer Science,
>>> Rochester Institute of Technology.
>>>
>>>
>>
>>
>>  --
>> Srikanth Kommineni,
>> Graduate Assistant,
>> Dept of Computer Science,
>> Rochester Institute of Technology.
>>
>>
>> --
>> Marcos Luis Ortíz Valmaseda (@marcosluis2186)
>>  Data Engineer at UCI
>>   <http://marcosluis2186.posterous.com>http://marcosluis2186.posterous.com
>>
>>
>>
>>  <http://www.uci.cu/>
>>
>>
>
>
> --
> Srikanth Kommineni,
> Graduate Assistant,
> Dept of Computer Science,
> Rochester Institute of Technology.
>
>


-- 
Srikanth Kommineni,
Graduate Assistant,
Dept of Computer Science,
Rochester Institute of Technology.

Re: unable to resolve the heap space error even when running the examples

Posted by "SRIKANTH KOMMINENI (RIT Student)" <sx...@rit.edu>.
The following is the error that i get


 bin/hadoop jar hadoop-examples-*.jar grep input output 'dfs[a-z.]+'
12/04/11 23:52:50 INFO util.NativeCodeLoader: Loaded the native-hadoop
library
12/04/11 23:52:50 WARN mapred.JobClient: No job jar file set.  User classes
may not be found. See JobConf(Class) or JobConf#setJar(String).
12/04/11 23:52:50 WARN snappy.LoadSnappy: Snappy native library not loaded
12/04/11 23:52:50 INFO mapred.FileInputFormat: Total input paths to process
: 7
12/04/11 23:52:51 INFO mapred.JobClient: Running job: job_local_0001
12/04/11 23:52:51 INFO util.ProcessTree: setsid exited with exit code 0
12/04/11 23:52:51 INFO mapred.Task:  Using ResourceCalculatorPlugin :
org.apache.hadoop.util.LinuxResourceCalculatorPlugin@59a34
12/04/11 23:52:51 INFO mapred.MapTask: numReduceTasks: 1
12/04/11 23:52:51 INFO mapred.MapTask: io.sort.mb = 100
12/04/11 23:52:51 WARN mapred.LocalJobRunner: job_local_0001
java.lang.OutOfMemoryError: Java heap space
at org.apache.hadoop.mapred.MapTask$MapOutputBuffer.<init>(MapTask.java:949)
at org.apache.hadoop.mapred.MapTask.runOldMapper(MapTask.java:428)
at org.apache.hadoop.mapred.MapTask.run(MapTask.java:372)
at org.apache.hadoop.mapred.LocalJobRunner$Job.run(LocalJobRunner.java:212)
12/04/11 23:52:52 INFO mapred.JobClient:  map 0% reduce 0%
12/04/11 23:52:52 INFO mapred.JobClient: Job complete: job_local_0001
12/04/11 23:52:52 INFO mapred.JobClient: Counters: 0
12/04/11 23:52:52 INFO mapred.JobClient: Job Failed: NA
java.io.IOException: Job failed!
at org.apache.hadoop.mapred.JobClient.runJob(JobClient.java:1265)
at org.apache.hadoop.examples.Grep.run(Grep.java:69)
at org.apache.hadoop.util.ToolRunner.run(ToolRunner.java:65)
at org.apache.hadoop.examples.Grep.main(Grep.java:93)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at
org.apache.hadoop.util.ProgramDriver$ProgramDescription.invoke(ProgramDriver.java:68)
at org.apache.hadoop.util.ProgramDriver.driver(ProgramDriver.java:139)
at org.apache.hadoop.examples.ExampleDriver.main(ExampleDriver.java:64)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at org.apache.hadoop.util.RunJar.main(RunJar.java:156)


On Thu, Apr 12, 2012 at 10:37 AM, Mapred Learn <ma...@gmail.com>wrote:

> Can u share ur error also ?
>
> Sent from my iPhone
>
> On Apr 12, 2012, at 7:16 AM, Marcos Ortiz <ml...@uci.cu> wrote:
>
> Can you show to us the logs of your NN/DN?
>
> On 04/12/2012 03:28 AM, SRIKANTH KOMMINENI (RIT Student) wrote:
>
> Tried that it didn't work for a lot of combinations of values
>
> On Thu, Apr 12, 2012 at 3:25 AM, Mapred Learn < <ma...@gmail.com>
> mapred.learn@gmail.com> wrote:
>
>>  Try exporting HADOOP_HEAPSIZE to bigger value like 1500 (1.5 gb) before
>> running program or change it in hadoop-env.sh
>>
>>  If still gives error, u can try with bigger value.
>>
>> Sent from my iPhone
>>
>> On Apr 12, 2012, at 12:10 AM, "SRIKANTH KOMMINENI (RIT Student)" <<s...@rit.edu>
>> sxk7699@rit.edu> wrote:
>>
>>    Hello,
>>
>>  I have searched a lot and still cant find any solution that can fix my
>> problem.
>>
>>  I am using the the basic downloaded version of hadoop-1.0.2 and I have
>> edited only what has been asked in the setup page of hadoop and I have set
>> it up to work in a pseudo random distributed mode.
>>
>>  My JAVA_HOME is set to /usr/lib/jvm/java-6-sun, I tried editing the
>> heap size in hadoop-env.sh that didn't work. I tried setting the CHILD_OPTS
>> that didn't work, I found that there was another hadoop-env.sh in
>> /etc/hadoop/ as per the recommendations in the mailing
>> list archives that didn't work . I tried increasing the  io.sort.mb
>> that didn't work. I am totally frustrated but it still doesn't work.please
>> help.
>>
>>
>>  --
>> Srikanth Kommineni,
>> Graduate Assistant,
>> Dept of Computer Science,
>> Rochester Institute of Technology.
>>
>>
>>
>>
>>  --
>> Srikanth Kommineni,
>> Graduate Assistant,
>> Dept of Computer Science,
>> Rochester Institute of Technology.
>>
>>
>>
>>
>>  --
>> Srikanth Kommineni,
>> Graduate Assistant,
>> Dept of Computer Science,
>> Rochester Institute of Technology.
>>
>>
>
>
>  --
> Srikanth Kommineni,
> Graduate Assistant,
> Dept of Computer Science,
> Rochester Institute of Technology.
>
>
> --
> Marcos Luis Ortíz Valmaseda (@marcosluis2186)
>  Data Engineer at UCI
>   <http://marcosluis2186.posterous.com>http://marcosluis2186.posterous.com
>
>
>
>  <http://www.uci.cu/>
>
>


-- 
Srikanth Kommineni,
Graduate Assistant,
Dept of Computer Science,
Rochester Institute of Technology.

Re: unable to resolve the heap space error even when running the examples

Posted by Mapred Learn <ma...@gmail.com>.
Can u share ur error also ?

Sent from my iPhone

On Apr 12, 2012, at 7:16 AM, Marcos Ortiz <ml...@uci.cu> wrote:

> Can you show to us the logs of your NN/DN?
> 
> On 04/12/2012 03:28 AM, SRIKANTH KOMMINENI (RIT Student) wrote:
>> 
>> Tried that it didn't work for a lot of combinations of values
>> 
>> On Thu, Apr 12, 2012 at 3:25 AM, Mapred Learn <ma...@gmail.com> wrote:
>> Try exporting HADOOP_HEAPSIZE to bigger value like 1500 (1.5 gb) before running program or change it in hadoop-env.sh
>> 
>> If still gives error, u can try with bigger value.
>> 
>> Sent from my iPhone
>> 
>> On Apr 12, 2012, at 12:10 AM, "SRIKANTH KOMMINENI (RIT Student)" <sx...@rit.edu> wrote:
>> 
>>> Hello, 
>>> 
>>> I have searched a lot and still cant find any solution that can fix my problem.
>>> 
>>> I am using the the basic downloaded version of hadoop-1.0.2 and I have edited only what has been asked in the setup page of hadoop and I have set it up to work in a pseudo random distributed mode. 
>>> 
>>> My JAVA_HOME is set to /usr/lib/jvm/java-6-sun, I tried editing the heap size in hadoop-env.sh that didn't work. I tried setting the CHILD_OPTS that didn't work, I found that there was another hadoop-env.sh in /etc/hadoop/ as per the recommendations in the mailing list archives that didn't work . I tried increasing the  io.sort.mb that didn't work. I am totally frustrated but it still doesn't work.please help. 
>>> 
>>> 
>>> -- 
>>> Srikanth Kommineni,
>>> Graduate Assistant, 
>>> Dept of Computer Science,
>>> Rochester Institute of Technology.
>>> 
>>> 
>>> 
>>> 
>>> -- 
>>> Srikanth Kommineni,
>>> Graduate Assistant, 
>>> Dept of Computer Science,
>>> Rochester Institute of Technology.
>>> 
>>> 
>>> 
>>> 
>>> -- 
>>> Srikanth Kommineni,
>>> Graduate Assistant, 
>>> Dept of Computer Science,
>>> Rochester Institute of Technology.
>>> 
>> 
>> 
>> 
>> -- 
>> Srikanth Kommineni,
>> Graduate Assistant, 
>> Dept of Computer Science,
>> Rochester Institute of Technology.
>> 
> 
> -- 
> Marcos Luis Ortíz Valmaseda (@marcosluis2186)
>  Data Engineer at UCI
>  http://marcosluis2186.posterous.com 
> 
>     

Re: unable to resolve the heap space error even when running the examples

Posted by Marcos Ortiz <ml...@uci.cu>.
Can you show to us the logs of your NN/DN?

On 04/12/2012 03:28 AM, SRIKANTH KOMMINENI (RIT Student) wrote:
> Tried that it didn't work for a lot of combinations of values
>
> On Thu, Apr 12, 2012 at 3:25 AM, Mapred Learn <mapred.learn@gmail.com 
> <ma...@gmail.com>> wrote:
>
>     Try exporting HADOOP_HEAPSIZE to bigger value like 1500 (1.5 gb)
>     before running program or change it in hadoop-env.sh
>
>     If still gives error, u can try with bigger value.
>
>     Sent from my iPhone
>
>     On Apr 12, 2012, at 12:10 AM, "SRIKANTH KOMMINENI (RIT Student)"
>     <sxk7699@rit.edu <ma...@rit.edu>> wrote:
>
>>     Hello,
>>
>>     I have searched a lot and still cant find any solution that can
>>     fix my problem.
>>
>>     I am using the the basic downloaded version of hadoop-1.0.2 and I
>>     have edited only what has been asked in the setup page of hadoop
>>     and I have set it up to work in a pseudo random distributed mode.
>>
>>     My JAVA_HOME is set to /usr/lib/jvm/java-6-sun, I tried editing
>>     the heap size in hadoop-env.sh that didn't work. I tried setting
>>     the CHILD_OPTS that didn't work, I found that there was another
>>     hadoop-env.sh in /etc/hadoop/ as per the recommendations in the
>>     mailing list archives that didn't work . I tried increasing the
>>     io.sort.mb that didn't work. I am totally frustrated but it
>>     still doesn't work.please help.
>>
>>
>>     -- 
>>     Srikanth Kommineni,
>>     Graduate Assistant,
>>     Dept of Computer Science,
>>     Rochester Institute of Technology.
>>
>>
>>
>>
>>     -- 
>>     Srikanth Kommineni,
>>     Graduate Assistant,
>>     Dept of Computer Science,
>>     Rochester Institute of Technology.
>>
>>
>>
>>
>>     -- 
>>     Srikanth Kommineni,
>>     Graduate Assistant,
>>     Dept of Computer Science,
>>     Rochester Institute of Technology.
>>
>
>
>
> -- 
> Srikanth Kommineni,
> Graduate Assistant,
> Dept of Computer Science,
> Rochester Institute of Technology.
>

-- 
Marcos Luis Ortíz Valmaseda (@marcosluis2186)
  Data Engineer at UCI
  http://marcosluis2186.posterous.com



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http://www.uci.cu
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Re: unable to resolve the heap space error even when running the examples

Posted by "SRIKANTH KOMMINENI (RIT Student)" <sx...@rit.edu>.
Tried that it didn't work for a lot of combinations of values

On Thu, Apr 12, 2012 at 3:25 AM, Mapred Learn <ma...@gmail.com>wrote:

> Try exporting HADOOP_HEAPSIZE to bigger value like 1500 (1.5 gb) before
> running program or change it in hadoop-env.sh
>
> If still gives error, u can try with bigger value.
>
> Sent from my iPhone
>
> On Apr 12, 2012, at 12:10 AM, "SRIKANTH KOMMINENI (RIT Student)" <
> sxk7699@rit.edu> wrote:
>
> Hello,
>
> I have searched a lot and still cant find any solution that can fix my
> problem.
>
> I am using the the basic downloaded version of hadoop-1.0.2 and I have
> edited only what has been asked in the setup page of hadoop and I have set
> it up to work in a pseudo random distributed mode.
>
> My JAVA_HOME is set to /usr/lib/jvm/java-6-sun, I tried editing the heap
> size in hadoop-env.sh that didn't work. I tried setting the CHILD_OPTS
> that didn't work, I found that there was another hadoop-env.sh in
> /etc/hadoop/ as per the recommendations in the mailing
> list archives that didn't work . I tried increasing the  io.sort.mb
> that didn't work. I am totally frustrated but it still doesn't work.please
> help.
>
>
> --
> Srikanth Kommineni,
> Graduate Assistant,
> Dept of Computer Science,
> Rochester Institute of Technology.
>
>
>
>
> --
> Srikanth Kommineni,
> Graduate Assistant,
> Dept of Computer Science,
> Rochester Institute of Technology.
>
>
>
>
> --
> Srikanth Kommineni,
> Graduate Assistant,
> Dept of Computer Science,
> Rochester Institute of Technology.
>
>


-- 
Srikanth Kommineni,
Graduate Assistant,
Dept of Computer Science,
Rochester Institute of Technology.

Re: unable to resolve the heap space error even when running the examples

Posted by Mapred Learn <ma...@gmail.com>.
Try exporting HADOOP_HEAPSIZE to bigger value like 1500 (1.5 gb) before running program or change it in hadoop-env.sh

If still gives error, u can try with bigger value.

Sent from my iPhone

On Apr 12, 2012, at 12:10 AM, "SRIKANTH KOMMINENI (RIT Student)" <sx...@rit.edu> wrote:

> Hello, 
> 
> I have searched a lot and still cant find any solution that can fix my problem.
> 
> I am using the the basic downloaded version of hadoop-1.0.2 and I have edited only what has been asked in the setup page of hadoop and I have set it up to work in a pseudo random distributed mode. 
> 
> My JAVA_HOME is set to /usr/lib/jvm/java-6-sun, I tried editing the heap size in hadoop-env.sh that didn't work. I tried setting the CHILD_OPTS that didn't work, I found that there was another hadoop-env.sh in /etc/hadoop/ as per the recommendations in the mailing list archives that didn't work . I tried increasing the  io.sort.mb that didn't work. I am totally frustrated but it still doesn't work.please help. 
> 
> 
> -- 
> Srikanth Kommineni,
> Graduate Assistant, 
> Dept of Computer Science,
> Rochester Institute of Technology.
> 
> 
> 
> 
> -- 
> Srikanth Kommineni,
> Graduate Assistant, 
> Dept of Computer Science,
> Rochester Institute of Technology.
> 
> 
> 
> 
> -- 
> Srikanth Kommineni,
> Graduate Assistant, 
> Dept of Computer Science,
> Rochester Institute of Technology.
>