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Posted to commits@systemml.apache.org by re...@apache.org on 2018/05/21 20:12:45 UTC
systemml git commit: [MINOR] switch build/test server to travis-ci
Repository: systemml
Updated Branches:
refs/heads/master 73f9d417d -> f7078c292
[MINOR] switch build/test server to travis-ci
Closes #765.
Project: http://git-wip-us.apache.org/repos/asf/systemml/repo
Commit: http://git-wip-us.apache.org/repos/asf/systemml/commit/f7078c29
Tree: http://git-wip-us.apache.org/repos/asf/systemml/tree/f7078c29
Diff: http://git-wip-us.apache.org/repos/asf/systemml/diff/f7078c29
Branch: refs/heads/master
Commit: f7078c292fe46331a91e1b18394e5579c25cf324
Parents: 73f9d41
Author: Berthold Reinwald <re...@us.ibm.com>
Authored: Mon May 21 13:08:31 2018 -0700
Committer: Berthold Reinwald <re...@us.ibm.com>
Committed: Mon May 21 13:08:31 2018 -0700
----------------------------------------------------------------------
.travis.yml | 52 +++++
conf/log4j-silent.properties | 282 ++++++++++++++++++++++++++++
pom.xml | 76 +++++---
src/test/scripts/installDependencies.R | 2 +-
4 files changed, 387 insertions(+), 25 deletions(-)
----------------------------------------------------------------------
http://git-wip-us.apache.org/repos/asf/systemml/blob/f7078c29/.travis.yml
----------------------------------------------------------------------
diff --git a/.travis.yml b/.travis.yml
new file mode 100644
index 0000000..a0c308b
--- /dev/null
+++ b/.travis.yml
@@ -0,0 +1,52 @@
+#
+# Licensed to the Apache Software Foundation (ASF) under one or more
+# contributor license agreements. See the NOTICE file distributed with
+# this work for additional information regarding copyright ownership.
+# The ASF licenses this file to You under the Apache License, Version 2.0
+# (the "License"); you may not use this file except in compliance with
+# the License. You may obtain a copy of the License at
+#
+# http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+
+dist: trusty
+
+language: java
+
+jdk:
+ - oraclejdk8
+
+addons:
+ apt:
+ sources:
+ - r-packages-trusty
+ packages:
+ - r-base-dev
+
+cache:
+ apt: true
+ directories:
+# caching .m2 causes an error loading hadoop-yarn-common-2.6.0.jar. Not sure why.
+# - ${HOME}/.m2
+ - ${HOME}/R
+ - /usr/local/lib/R/site-library
+
+install:
+ - sudo Rscript ./src/test/scripts/installDependencies.R
+
+before_script:
+# this is not needed anymore since adding authentication object in code for running hadoop/spark local
+# - chmod -R 755 *
+
+script:
+# - mvn clean verify jacoco:report coveralls:report
+ - mvn clean verify
+
+after_success:
+# - mvn test jacoco:report coveralls:report
\ No newline at end of file
http://git-wip-us.apache.org/repos/asf/systemml/blob/f7078c29/conf/log4j-silent.properties
----------------------------------------------------------------------
diff --git a/conf/log4j-silent.properties b/conf/log4j-silent.properties
new file mode 100644
index 0000000..7e7adda
--- /dev/null
+++ b/conf/log4j-silent.properties
@@ -0,0 +1,282 @@
+#-------------------------------------------------------------
+#
+# Licensed to the Apache Software Foundation (ASF) under one
+# or more contributor license agreements. See the NOTICE file
+# distributed with this work for additional information
+# regarding copyright ownership. The ASF licenses this file
+# to you under the Apache License, Version 2.0 (the
+# "License"); you may not use this file except in compliance
+# with the License. You may obtain a copy of the License at
+#
+# http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing,
+# software distributed under the License is distributed on an
+# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+# KIND, either express or implied. See the License for the
+# specific language governing permissions and limitations
+# under the License.
+#
+#-------------------------------------------------------------
+
+# Define some default values that can be overridden by system properties
+hadoop.root.logger=INFO,console
+hadoop.log.dir=.
+hadoop.log.file=hadoop.log
+hadoop.security.logger=OFF
+
+# Security appender
+log4j.appender.RFAS=org.apache.log4j.RollingFileAppender
+log4j.appender.RFAS.File=${hadoop.log.dir}/${hadoop.security.log.file}
+log4j.appender.RFAS.layout=org.apache.log4j.PatternLayout
+log4j.appender.RFAS.layout.ConversionPattern=%d{ISO8601} %p %c: %m%n
+log4j.appender.RFAS.MaxFileSize=${hadoop.security.log.maxfilesize}
+log4j.appender.RFAS.MaxBackupIndex=${hadoop.security.log.maxbackupindex}
+
+log4j.logger.org.apache.spark=ERROR
+
+#
+# Job Summary Appender
+#
+# Use following logger to send summary to separate file defined by
+# hadoop.mapreduce.jobsummary.log.file rolled daily:
+# hadoop.mapreduce.jobsummary.logger=INFO,JSA
+#
+hadoop.mapreduce.jobsummary.logger=${hadoop.root.logger}
+hadoop.mapreduce.jobsummary.log.file=hadoop-mapreduce.jobsummary.log
+
+# Define the root logger to the system property "hadoop.root.logger".
+log4j.rootLogger=${hadoop.root.logger}, EventCounter
+
+# Logging Threshold
+log4j.threshold=ALL
+
+#
+# Guardim Proxy setup - HDFS, MapReduce and Hadoop RPC
+#
+log4j.appender.GuardiumProxyAppender=org.apache.log4j.net.SocketAppender
+log4j.appender.GuardiumProxyAppender.RemoteHost=
+log4j.appender.GuardiumProxyAppender.Port=
+log4j.appender.GuardiumProxyAppender.RecoveryFile=audit-${hadoop.log.file}
+log4j.appender.GuardiumProxyAppender.Threshold=INFO
+
+# Hdfs audit logs
+log4j.additivity.org.apache.hadoop.hdfs.server.namenode.FSNamesystem.audit=false
+log4j.logger.org.apache.hadoop.hdfs.server.namenode.FSNamesystem.audit=${hadoop.security.logger}
+
+hdfs.audit.logger=INFO,NullAppender
+hdfs.audit.log.maxfilesize=256MB
+hdfs.audit.log.maxbackupindex=20
+log4j.appender.RFAAUDIT=org.apache.log4j.RollingFileAppender
+log4j.appender.RFAAUDIT.File=${hadoop.log.dir}/hdfs-audit.log
+log4j.appender.RFAAUDIT.layout=org.apache.log4j.PatternLayout
+log4j.appender.RFAAUDIT.layout.ConversionPattern=%d{ISO8601} %p %c{2}: %m%n
+log4j.appender.RFAAUDIT.MaxFileSize=${hdfs.audit.log.maxfilesize}
+log4j.appender.RFAAUDIT.MaxBackupIndex=${hdfs.audit.log.maxbackupindex}
+
+# MapReduce audit logs
+log4j.additivity.org.apache.hadoop.mapred.AuditLogger=false
+log4j.logger.org.apache.hadoop.mapred.AuditLogger=${hadoop.security.logger}
+
+mapred.audit.logger=INFO,NullAppender
+mapred.audit.log.maxfilesize=256MB
+mapred.audit.log.maxbackupindex=20
+log4j.appender.MRAUDIT=org.apache.log4j.RollingFileAppender
+log4j.appender.MRAUDIT.File=${hadoop.log.dir}/mapred-audit.log
+log4j.appender.MRAUDIT.layout=org.apache.log4j.PatternLayout
+log4j.appender.MRAUDIT.layout.ConversionPattern=%d{ISO8601} %p %c{2}: %m%n
+log4j.appender.MRAUDIT.MaxFileSize=${mapred.audit.log.maxfilesize}
+log4j.appender.MRAUDIT.MaxBackupIndex=${mapred.audit.log.maxbackupindex}
+
+# Hadoop RPC audit logs
+log4j.additivity.SecurityLogger=false
+log4j.logger.SecurityLogger=${hadoop.security.logger}
+
+log4j.appender.hadoopaudit=org.apache.log4j.DailyRollingFileAppender
+log4j.appender.hadoopaudit.DatePattern='.'yyyy-MM-dd
+log4j.appender.hadoopaudit.File=${hadoop.log.dir}/audit-${hadoop.log.file}
+log4j.appender.hadoopaudit.Append=true
+log4j.appender.hadoopaudit.layout=org.apache.log4j.PatternLayout
+log4j.appender.hadoopaudit.layout.ConversionPattern=%d{ISO8601} %5p %c - %m%n
+
+#
+# Daily Rolling File Appender
+#
+
+#log4j.appender.DRFA=org.apache.log4j.DailyRollingFileAppender
+#log4j.appender.DRFA.File=${hadoop.log.dir}/${hadoop.log.file}
+
+# Rollver at midnight
+#log4j.appender.DRFA.DatePattern=.yyyy-MM-dd
+
+# 30-day backup
+#log4j.appender.DRFA.MaxBackupIndex=30
+#log4j.appender.DRFA.layout=org.apache.log4j.PatternLayout
+
+# Pattern format: Date LogLevel LoggerName LogMessage
+#log4j.appender.DRFA.layout.ConversionPattern=%d{ISO8601} %p %c: %m%n
+# Debugging Pattern format
+#log4j.appender.DRFA.layout.ConversionPattern=%d{ISO8601} %-5p %c{2} (%F:%M(%L)) - %m%n
+
+#
+# console
+# Add "console" to rootlogger above if you want to use this
+#
+
+log4j.appender.console=org.apache.log4j.ConsoleAppender
+log4j.appender.console.target=System.err
+log4j.appender.console.layout=org.apache.log4j.PatternLayout
+log4j.appender.console.layout.ConversionPattern=%d{yy/MM/dd HH:mm:ss} %p %c{2}: %m%n
+
+#
+# TaskLog Appender
+#
+
+#Default values
+hadoop.tasklog.taskid=null
+hadoop.tasklog.iscleanup=false
+hadoop.tasklog.noKeepSplits=4
+hadoop.tasklog.totalLogFileSize=100
+hadoop.tasklog.purgeLogSplits=true
+hadoop.tasklog.logsRetainHours=12
+
+log4j.appender.TLA=org.apache.hadoop.mapred.TaskLogSocketAppender
+log4j.appender.TLA.taskId=${hadoop.tasklog.taskid}
+log4j.appender.TLA.isCleanup=${hadoop.tasklog.iscleanup}
+log4j.appender.TLA.totalLogFileSize=${hadoop.tasklog.totalLogFileSize}
+
+log4j.appender.TLA.layout=org.apache.log4j.PatternLayout
+log4j.appender.TLA.layout.ConversionPattern=%d{ISO8601} %p %c: %m%n
+
+#
+#Security audit appender
+#
+
+hadoop.security.log.file=SecurityAuth.audit
+log4j.appender.DRFAS=org.apache.log4j.DailyRollingFileAppender
+log4j.appender.DRFAS.File=${hadoop.log.dir}/${hadoop.security.log.file}
+log4j.appender.DRFAS.layout=org.apache.log4j.PatternLayout
+log4j.appender.DRFAS.layout.ConversionPattern=%d{ISO8601} %p %c: %m%n
+log4j.appender.DRFAS.DatePattern=.yyyy-MM-dd
+
+#
+# Rolling File Appender
+#
+
+#log4j.appender.RFA=org.apache.log4j.RollingFileAppender
+#log4j.appender.RFA.File=${hadoop.log.dir}/${hadoop.log.file}
+# Logfile size and and 30-day backups
+#log4j.appender.RFA.MaxFileSize=1MB
+#log4j.appender.RFA.MaxBackupIndex=30
+#log4j.appender.RFA.layout=org.apache.log4j.PatternLayout
+#log4j.appender.RFA.layout.ConversionPattern=%d{ISO8601} %-5p %c{2} - %m%n
+#log4j.appender.RFA.layout.ConversionPattern=%d{ISO8601} %-5p %c{2} (%F:%M(%L)) - %m%n
+
+
+#
+# Rolling File Appender
+#
+
+log4j.appender.RFA=org.apache.log4j.RollingFileAppender
+log4j.appender.RFA.File=${hadoop.log.dir}/${hadoop.log.file}
+# Logfile size and and 30-day backups
+log4j.appender.RFA.MaxFileSize=10MB
+log4j.appender.RFA.MaxBackupIndex=3
+log4j.appender.RFA.layout=org.apache.log4j.PatternLayout
+log4j.appender.RFA.layout.ConversionPattern=%d{ISO8601} %p %c: %m%n
+#log4j.appender.RFA.layout.ConversionPattern=%d{ISO8601} %-5p %c{2} (%F:%M(%L)) - %m%n
+
+#
+#Logger for streaming Job Configuration
+#
+log4j.logger.org.apache.hadoop.mapred.JobTrackerConfLogStreaming=INFO,${SAJC}
+log4j.additivity.org.apache.hadoop.mapred.JobTrackerConfLogStreaming=false
+
+#
+#Socket Appender for streaming Job Configuration
+#
+log4j.appender.job.conf=org.apache.log4j.net.SocketAppender
+log4j.appender.job.conf.RemoteHost=localhost
+log4j.appender.job.conf.Port=${JOBCONF_LOGGING_PORT}
+log4j.appender.job.conf.layout=org.apache.log4j.PatternLayout
+log4j.appender.job.conf.layout.ConversionPattern=%d{ISO8601} %p %c: %m%n
+log4j.appender.job.conf.appender.ReconnectionDelay=120000
+
+
+#
+#Logger for streaming task attempt logs
+#
+log4j.logger.org.apache.hadoop.mapred.TaskLogSocketAppender=INFO,${SATA}
+log4j.additivity.org.apache.hadoop.mapred.TaskLogSocketAppender=false
+
+#
+#Socket appender for streaming task attempt logs
+#
+log4j.appender.task.attempt.log=org.apache.log4j.net.SocketAppender
+log4j.appender.task.attempt.log.RemoteHost=localhost
+log4j.appender.task.attempt.log.Port=${TASKATTEMPT_LOGGING_PORT}
+log4j.appender.task.attempt.log.layout=org.apache.log4j.PatternLayout
+log4j.appender.task.attempt.log.layout.ConversionPattern=%d{ISO8601} %p %c: %m%n
+log4j.appender.task.attempt.log.appender.ReconnectionDelay=120000
+
+#
+#Socket Appender for Streaming NameNode,SecondaryNameNode and JobTracker Logs
+#
+log4j.appender.socket.appender=org.apache.log4j.net.SocketAppender
+log4j.appender.socket.appender.RemoteHost=localhost
+log4j.appender.socket.appender.Port=${HADOOP_LOGGING_PORT}
+log4j.appender.socket.appender.layout=org.apache.log4j.PatternLayout
+log4j.appender.socket.appender.layout.ConversionPattern=%d{ISO8601} %p %c: %m%n
+log4j.appender.socket.appender.ReconnectionDelay=120000
+
+#
+#Logger for streaming Job History Logs
+#
+log4j.logger.JobHistoryLogs=INFO,${SAJH}
+log4j.additivity.JobHistoryLogs=false
+
+#
+#Socket Appender for Job History Logs
+#
+log4j.appender.job.history.log=org.apache.log4j.net.SocketAppender
+log4j.appender.job.history.log.RemoteHost=localhost
+log4j.appender.job.history.log.Port=${JOBHISTORY_LOGGING_PORT}
+log4j.appender.job.history.log.layout=org.apache.log4j.PatternLayout
+log4j.appender.job.history.log.layout.ConversionPattern=%d{ISO8601} %p %c: %m%n
+log4j.appender.job.history.appender.ReconnectionDelay=120000
+
+
+
+# Custom Logging levels
+
+hadoop.metrics.log.level=INFO
+#log4j.logger.org.apache.hadoop.mapred.JobTracker=DEBUG
+#log4j.logger.org.apache.hadoop.mapred.TaskTracker=DEBUG
+#log4j.logger.org.apache.hadoop.fs.FSNamesystem=DEBUG
+log4j.logger.org.apache.hadoop.metrics2=${hadoop.metrics.log.level}
+
+# Jets3t library
+log4j.logger.org.jets3t.service.impl.rest.httpclient.RestS3Service=ERROR
+
+#
+# Null Appender
+# Trap security logger on the hadoop client side
+#
+log4j.appender.NullAppender=org.apache.log4j.varia.NullAppender
+
+#
+# Event Counter Appender
+# Sends counts of logging messages at different severity levels to Hadoop Metrics.
+#
+log4j.appender.EventCounter=org.apache.hadoop.log.metrics.EventCounter
+
+#
+# Job Summary Appender
+#
+log4j.appender.JSA=org.apache.log4j.DailyRollingFileAppender
+log4j.appender.JSA.File=${hadoop.log.dir}/${hadoop.mapreduce.jobsummary.log.file}
+log4j.appender.JSA.layout=org.apache.log4j.PatternLayout
+log4j.appender.JSA.layout.ConversionPattern=%d{yy/MM/dd HH:mm:ss} %p %c{2}: %m%n
+log4j.appender.JSA.DatePattern=.yyyy-MM-dd
+log4j.logger.org.apache.hadoop.mapred.JobInProgress$JobSummary=${hadoop.mapreduce.jobsummary.logger}
+log4j.additivity.org.apache.hadoop.mapred.JobInProgress$JobSummary=false
http://git-wip-us.apache.org/repos/asf/systemml/blob/f7078c29/pom.xml
----------------------------------------------------------------------
diff --git a/pom.xml b/pom.xml
index 5dfaf11..ee5da7a 100644
--- a/pom.xml
+++ b/pom.xml
@@ -1,21 +1,24 @@
<?xml version="1.0" encoding="UTF-8"?>
<!--
- ~ Licensed to the Apache Software Foundation (ASF) under one or more
- ~ contributor license agreements. See the NOTICE file distributed with
- ~ this work for additional information regarding copyright ownership.
- ~ The ASF licenses this file to You under the Apache License, Version 2.0
- ~ (the "License"); you may not use this file except in compliance with
- ~ the License. You may obtain a copy of the License at
- ~
- ~ http://www.apache.org/licenses/LICENSE-2.0
- ~
- ~ Unless required by applicable law or agreed to in writing, software
- ~ distributed under the License is distributed on an "AS IS" BASIS,
- ~ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- ~ See the License for the specific language governing permissions and
- ~ limitations under the License.
- -->
-<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements. See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership. The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied. See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+-->
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+ xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<parent>
<groupId>org.apache</groupId>
@@ -431,6 +434,11 @@
<forkCount>0.5C</forkCount>
<reuseForks>false</reuseForks>
+ <!-- Limit Spark log output-->
+ <systemPropertyVariables>
+ <log4j.configuration>file:${basedir}/conf/log4j-silent.properties</log4j.configuration>
+ </systemPropertyVariables>
+
<!-- Last argument prevents Java from popping up lots of windows on
MacOS -->
<argLine>-Dfile.encoding=UTF-8 -Xmx2g -Xms2g -Xmn200m
@@ -439,16 +447,16 @@
<includes>
<include>${gpuTestsPath}</include> <!-- Path for GPU integration tests, enabled for gpuTests profile -->
- <include>**/integration/applications/**/*Suite.java</include>
- <include>**/integration/conversion/*Suite.java</include>
- <include>**/integration/functions/data/*Suite.java</include>
+ <!-- <include>**/integration/applications/**/*Suite.java</include> -->
+ <!-- <include>**/integration/conversion/*Suite.java</include> -->
+ <!-- <include>**/integration/functions/data/*Suite.java</include> -->
<include>**/integration/functions/sparse/*Suite.java</include>
- <include>**/integration/functions/codegenalg/*Suite.java</include>
- <include>**/integration/functions/**/*Test*.java</include>
+ <!-- <include>**/integration/functions/codegenalg/*Suite.java</include> -->
+ <!-- <include>**/integration/functions/**/*Test*.java</include> -->
<include>**/integration/mlcontext/*Suite.java</include>
- <include>**/integration/mlcontext/algorithms/*Suite.java</include>
+ <!-- <include>**/integration/mlcontext/algorithms/*Suite.java</include> -->
<include>**/integration/scripts/nn/*Suite.java</include>
- <include>**/integration/scalability/**/*Test.java</include>
+ <!-- <include>**/integration/scalability/**/*Test.java</include> -->
</includes>
<excludes>
@@ -584,7 +592,9 @@
<phase>package</phase>
<configuration>
<target name="copy and rename JAR">
- <copy file="${project.build.directory}/${project.artifactId}-${project.version}.jar" tofile="${project.build.directory}/SystemML.jar" />
+ <copy
+ file="${project.build.directory}/${project.artifactId}-${project.version}.jar"
+ tofile="${project.build.directory}/SystemML.jar" />
</target>
</configuration>
<goals>
@@ -629,6 +639,24 @@
</execution>
</executions>
</plugin>
+ <plugin>
+ <groupId>org.jacoco</groupId>
+ <artifactId>jacoco-maven-plugin</artifactId>
+ <version>0.7.6.201602180812</version>
+ <executions>
+ <execution>
+ <id>prepare-agent</id>
+ <goals>
+ <goal>prepare-agent</goal>
+ </goals>
+ </execution>
+ </executions>
+ </plugin>
+ <plugin>
+ <groupId>org.eluder.coveralls</groupId>
+ <artifactId>coveralls-maven-plugin</artifactId>
+ <version>4.3.0</version>
+ </plugin>
</plugins>
</build>
http://git-wip-us.apache.org/repos/asf/systemml/blob/f7078c29/src/test/scripts/installDependencies.R
----------------------------------------------------------------------
diff --git a/src/test/scripts/installDependencies.R b/src/test/scripts/installDependencies.R
index 867d669..277571f 100644
--- a/src/test/scripts/installDependencies.R
+++ b/src/test/scripts/installDependencies.R
@@ -21,7 +21,7 @@
custom_install <- function(pkg) {
if(!is.element(pkg, installed.packages()[,1])) {
- install.packages(pkg, repos="http://cran.stat.ucla.edu/");
+ install.packages(pkg, repos="https://cran.cnr.berkeley.edu/");
}
}