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Posted to commits@druid.apache.org by fj...@apache.org on 2019/12/24 03:32:09 UTC
[druid] branch 0.17.0-incubating updated: Handle null values for
metrics in TDigest aggregators. (#9073) (#9094)
This is an automated email from the ASF dual-hosted git repository.
fjy pushed a commit to branch 0.17.0-incubating
in repository https://gitbox.apache.org/repos/asf/druid.git
The following commit(s) were added to refs/heads/0.17.0-incubating by this push:
new b41bbc0 Handle null values for metrics in TDigest aggregators. (#9073) (#9094)
b41bbc0 is described below
commit b41bbc089bd6123429f5ace8c6d67372a1a96015
Author: Clint Wylie <cw...@apache.org>
AuthorDate: Mon Dec 23 19:31:59 2019 -0800
Handle null values for metrics in TDigest aggregators. (#9073) (#9094)
Add support for rollup during ingestion.
Co-authored-by: Samarth Jain <sa...@apache.org>
---
.../tdigestsketch/TDigestSketchAggregator.java | 19 +-
.../TDigestSketchAggregatorFactory.java | 45 ++
.../TDigestSketchBufferAggregator.java | 12 +-
.../tdigestsketch/TDigestSketchUtils.java | 13 -
.../tdigestsketch/GenerateTestData.java | 3 +-
.../tdigestsketch/TDigestSketchAggregatorTest.java | 13 +-
.../src/test/resources/doubles_build_data.tsv | 800 ++++++++++-----------
.../src/test/resources/doubles_sketch_data.tsv | 40 +-
8 files changed, 498 insertions(+), 447 deletions(-)
diff --git a/extensions-contrib/tdigestsketch/src/main/java/org/apache/druid/query/aggregation/tdigestsketch/TDigestSketchAggregator.java b/extensions-contrib/tdigestsketch/src/main/java/org/apache/druid/query/aggregation/tdigestsketch/TDigestSketchAggregator.java
index 9197923..d43b19c 100644
--- a/extensions-contrib/tdigestsketch/src/main/java/org/apache/druid/query/aggregation/tdigestsketch/TDigestSketchAggregator.java
+++ b/extensions-contrib/tdigestsketch/src/main/java/org/apache/druid/query/aggregation/tdigestsketch/TDigestSketchAggregator.java
@@ -21,6 +21,7 @@ package org.apache.druid.query.aggregation.tdigestsketch;
import com.google.errorprone.annotations.concurrent.GuardedBy;
import com.tdunning.math.stats.MergingDigest;
+import org.apache.druid.java.util.common.IAE;
import org.apache.druid.query.aggregation.Aggregator;
import org.apache.druid.segment.ColumnValueSelector;
@@ -56,16 +57,24 @@ public class TDigestSketchAggregator implements Aggregator
@Override
public void aggregate()
{
- if (selector.getObject() instanceof Number) {
+ Object obj = selector.getObject();
+ if (obj == null) {
+ return;
+ }
+ if (obj instanceof Number) {
synchronized (this) {
- histogram.add(((Number) selector.getObject()).doubleValue());
+ histogram.add(((Number) obj).doubleValue());
}
- } else if (selector.getObject() instanceof MergingDigest) {
+ } else if (obj instanceof MergingDigest) {
synchronized (this) {
- histogram.add((MergingDigest) selector.getObject());
+ histogram.add((MergingDigest) obj);
}
} else {
- TDigestSketchUtils.throwExceptionForWrongType(selector);
+ throw new IAE(
+ "Expected a number or an instance of MergingDigest, but received [%s] of type [%s]",
+ obj,
+ obj.getClass()
+ );
}
}
diff --git a/extensions-contrib/tdigestsketch/src/main/java/org/apache/druid/query/aggregation/tdigestsketch/TDigestSketchAggregatorFactory.java b/extensions-contrib/tdigestsketch/src/main/java/org/apache/druid/query/aggregation/tdigestsketch/TDigestSketchAggregatorFactory.java
index 74caf61..dc93f75 100644
--- a/extensions-contrib/tdigestsketch/src/main/java/org/apache/druid/query/aggregation/tdigestsketch/TDigestSketchAggregatorFactory.java
+++ b/extensions-contrib/tdigestsketch/src/main/java/org/apache/druid/query/aggregation/tdigestsketch/TDigestSketchAggregatorFactory.java
@@ -24,13 +24,16 @@ import com.fasterxml.jackson.annotation.JsonProperty;
import com.fasterxml.jackson.annotation.JsonTypeName;
import com.tdunning.math.stats.MergingDigest;
import com.tdunning.math.stats.TDigest;
+import org.apache.druid.query.aggregation.AggregateCombiner;
import org.apache.druid.query.aggregation.Aggregator;
import org.apache.druid.query.aggregation.AggregatorFactory;
import org.apache.druid.query.aggregation.AggregatorFactoryNotMergeableException;
import org.apache.druid.query.aggregation.AggregatorUtil;
import org.apache.druid.query.aggregation.BufferAggregator;
+import org.apache.druid.query.aggregation.ObjectAggregateCombiner;
import org.apache.druid.query.cache.CacheKeyBuilder;
import org.apache.druid.segment.ColumnSelectorFactory;
+import org.apache.druid.segment.ColumnValueSelector;
import javax.annotation.Nonnull;
import javax.annotation.Nullable;
@@ -220,6 +223,48 @@ public class TDigestSketchAggregatorFactory extends AggregatorFactory
}
@Override
+ public AggregateCombiner makeAggregateCombiner()
+ {
+ return new ObjectAggregateCombiner<MergingDigest>()
+ {
+ private MergingDigest combined = new MergingDigest(compression);
+
+ @Override
+ public void reset(final ColumnValueSelector selector)
+ {
+ combined = null;
+ fold(selector);
+ }
+
+ @Override
+ public void fold(final ColumnValueSelector selector)
+ {
+ MergingDigest other = (MergingDigest) selector.getObject();
+ if (other == null) {
+ return;
+ }
+ if (combined == null) {
+ combined = new MergingDigest(compression);
+ }
+ combined.add(other);
+ }
+
+ @Nullable
+ @Override
+ public MergingDigest getObject()
+ {
+ return combined;
+ }
+
+ @Override
+ public Class<MergingDigest> classOfObject()
+ {
+ return MergingDigest.class;
+ }
+ };
+ }
+
+ @Override
public boolean equals(final Object o)
{
if (this == o) {
diff --git a/extensions-contrib/tdigestsketch/src/main/java/org/apache/druid/query/aggregation/tdigestsketch/TDigestSketchBufferAggregator.java b/extensions-contrib/tdigestsketch/src/main/java/org/apache/druid/query/aggregation/tdigestsketch/TDigestSketchBufferAggregator.java
index 3a9eb14..be65896 100644
--- a/extensions-contrib/tdigestsketch/src/main/java/org/apache/druid/query/aggregation/tdigestsketch/TDigestSketchBufferAggregator.java
+++ b/extensions-contrib/tdigestsketch/src/main/java/org/apache/druid/query/aggregation/tdigestsketch/TDigestSketchBufferAggregator.java
@@ -23,6 +23,7 @@ import com.google.common.base.Preconditions;
import com.tdunning.math.stats.MergingDigest;
import it.unimi.dsi.fastutil.ints.Int2ObjectMap;
import it.unimi.dsi.fastutil.ints.Int2ObjectOpenHashMap;
+import org.apache.druid.java.util.common.IAE;
import org.apache.druid.query.aggregation.BufferAggregator;
import org.apache.druid.segment.ColumnValueSelector;
@@ -66,14 +67,21 @@ public class TDigestSketchBufferAggregator implements BufferAggregator
@Override
public void aggregate(ByteBuffer buffer, int position)
{
- MergingDigest sketch = sketchCache.get(buffer).get(position);
Object x = selector.getObject();
+ if (x == null) {
+ return;
+ }
+ MergingDigest sketch = sketchCache.get(buffer).get(position);
if (x instanceof Number) {
sketch.add(((Number) x).doubleValue());
} else if (x instanceof MergingDigest) {
sketch.add((MergingDigest) x);
} else {
- TDigestSketchUtils.throwExceptionForWrongType(selector);
+ throw new IAE(
+ "Expected a number or an instance of MergingDigest, but received [%s] of type [%s]",
+ x,
+ x.getClass()
+ );
}
}
diff --git a/extensions-contrib/tdigestsketch/src/main/java/org/apache/druid/query/aggregation/tdigestsketch/TDigestSketchUtils.java b/extensions-contrib/tdigestsketch/src/main/java/org/apache/druid/query/aggregation/tdigestsketch/TDigestSketchUtils.java
index edfd148..3a5be13 100644
--- a/extensions-contrib/tdigestsketch/src/main/java/org/apache/druid/query/aggregation/tdigestsketch/TDigestSketchUtils.java
+++ b/extensions-contrib/tdigestsketch/src/main/java/org/apache/druid/query/aggregation/tdigestsketch/TDigestSketchUtils.java
@@ -22,7 +22,6 @@ package org.apache.druid.query.aggregation.tdigestsketch;
import com.tdunning.math.stats.MergingDigest;
import org.apache.druid.java.util.common.IAE;
import org.apache.druid.java.util.common.StringUtils;
-import org.apache.druid.segment.ColumnValueSelector;
import org.apache.druid.segment.VirtualColumn;
import org.apache.druid.segment.virtual.ExpressionVirtualColumn;
import org.apache.druid.sql.calcite.aggregation.Aggregation;
@@ -80,18 +79,6 @@ public class TDigestSketchUtils
return intermediateSize + 1000;
}
- static void throwExceptionForWrongType(ColumnValueSelector selector)
- {
- final String msg = selector.getObject() == null
- ? StringUtils.format("Expected a number, but received null")
- : StringUtils.format(
- "Expected a number, but received [%s] of type [%s]",
- selector.getObject(),
- selector.getObject().getClass()
- );
- throw new IAE(msg);
- }
-
public static boolean matchingAggregatorFactoryExists(
final DruidExpression input,
final Integer compression,
diff --git a/extensions-contrib/tdigestsketch/src/test/java/org/apache/druid/query/aggregation/tdigestsketch/GenerateTestData.java b/extensions-contrib/tdigestsketch/src/test/java/org/apache/druid/query/aggregation/tdigestsketch/GenerateTestData.java
index b6a2392..0d5f66a 100644
--- a/extensions-contrib/tdigestsketch/src/test/java/org/apache/druid/query/aggregation/tdigestsketch/GenerateTestData.java
+++ b/extensions-contrib/tdigestsketch/src/test/java/org/apache/druid/query/aggregation/tdigestsketch/GenerateTestData.java
@@ -57,7 +57,8 @@ public class GenerateTestData
buildData.write('\t');
buildData.write(Integer.toString(product)); // product dimension
buildData.write('\t');
- buildData.write(Double.toString(value));
+ // make 20% of the values null
+ buildData.write((rand.nextInt(10) % 5 == 0) ? "" : Double.toString(value));
buildData.newLine();
sketch.add(value);
sequenceNumber++;
diff --git a/extensions-contrib/tdigestsketch/src/test/java/org/apache/druid/query/aggregation/tdigestsketch/TDigestSketchAggregatorTest.java b/extensions-contrib/tdigestsketch/src/test/java/org/apache/druid/query/aggregation/tdigestsketch/TDigestSketchAggregatorTest.java
index d5577b9..a2220e6 100644
--- a/extensions-contrib/tdigestsketch/src/test/java/org/apache/druid/query/aggregation/tdigestsketch/TDigestSketchAggregatorTest.java
+++ b/extensions-contrib/tdigestsketch/src/test/java/org/apache/druid/query/aggregation/tdigestsketch/TDigestSketchAggregatorTest.java
@@ -20,6 +20,7 @@
package org.apache.druid.query.aggregation.tdigestsketch;
import com.fasterxml.jackson.databind.ObjectMapper;
+import org.apache.druid.common.config.NullHandling;
import org.apache.druid.jackson.DefaultObjectMapper;
import org.apache.druid.java.util.common.granularity.Granularities;
import org.apache.druid.java.util.common.guava.Sequence;
@@ -136,8 +137,8 @@ public class TDigestSketchAggregatorTest extends InitializedNullHandlingTest
Object quantilesObject = row.get(1); // "quantiles"
Assert.assertTrue(quantilesObject instanceof double[]);
double[] quantiles = (double[]) quantilesObject;
- Assert.assertEquals(0, quantiles[0], 0.05); // min value
- Assert.assertEquals(0.5, quantiles[1], 0.05); // median value
+ Assert.assertEquals(0.001, quantiles[0], 0.0006); // min value
+ Assert.assertEquals(NullHandling.replaceWithDefault() ? 0.47 : 0.5, quantiles[1], 0.05); // median value
Assert.assertEquals(1, quantiles[2], 0.05); // max value
}
@@ -192,8 +193,8 @@ public class TDigestSketchAggregatorTest extends InitializedNullHandlingTest
Object quantilesObject = row.get(1); // "quantiles"
Assert.assertTrue(quantilesObject instanceof double[]);
double[] quantiles = (double[]) quantilesObject;
- Assert.assertEquals(0, quantiles[0], 0.05); // min value
- Assert.assertEquals(0.5, quantiles[1], 0.05); // median value
+ Assert.assertEquals(NullHandling.replaceWithDefault() ? 0.0 : 0.001, quantiles[0], 0.0006); // min value
+ Assert.assertEquals(NullHandling.replaceWithDefault() ? 0.35 : 0.5, quantiles[1], 0.05); // median value
Assert.assertEquals(1, quantiles[2], 0.05); // max value
}
@@ -256,8 +257,8 @@ public class TDigestSketchAggregatorTest extends InitializedNullHandlingTest
Object quantilesObject = row.get(1); // "quantiles"
Assert.assertTrue(quantilesObject instanceof double[]);
double[] quantiles = (double[]) quantilesObject;
- Assert.assertEquals(0, quantiles[0], 0.05); // min value
- Assert.assertEquals(0.5, quantiles[1], 0.05); // median value
+ Assert.assertEquals(0.001, quantiles[0], 0.0006); // min value
+ Assert.assertEquals(NullHandling.replaceWithDefault() ? 0.47 : 0.5, quantiles[1], 0.05); // median value
Assert.assertEquals(1, quantiles[2], 0.05); // max value
}
}
diff --git a/extensions-contrib/tdigestsketch/src/test/resources/doubles_build_data.tsv b/extensions-contrib/tdigestsketch/src/test/resources/doubles_build_data.tsv
index 56eda05..3f37059 100644
--- a/extensions-contrib/tdigestsketch/src/test/resources/doubles_build_data.tsv
+++ b/extensions-contrib/tdigestsketch/src/test/resources/doubles_build_data.tsv
@@ -1,400 +1,400 @@
-2016010101 0 4 0.18400342240873802
-2016010101 1 4 0.6865245424441776
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diff --git a/extensions-contrib/tdigestsketch/src/test/resources/doubles_sketch_data.tsv b/extensions-contrib/tdigestsketch/src/test/resources/doubles_sketch_data.tsv
index f1f0bb8..b6dbb51 100644
--- a/extensions-contrib/tdigestsketch/src/test/resources/doubles_sketch_data.tsv
+++ b/extensions-contrib/tdigestsketch/src/test/resources/doubles_sketch_data.tsv
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