You are viewing a plain text version of this content. The canonical link for it is here.
Posted to issues@spark.apache.org by "Bobby Wang (Jira)" <ji...@apache.org> on 2022/09/12 08:39:00 UTC
[jira] [Created] (SPARK-40407) Repartition of DataFrame can result in severe data skew in some special case
Bobby Wang created SPARK-40407:
----------------------------------
Summary: Repartition of DataFrame can result in severe data skew in some special case
Key: SPARK-40407
URL: https://issues.apache.org/jira/browse/SPARK-40407
Project: Spark
Issue Type: Improvement
Components: SQL
Affects Versions: 3.2.2, 3.3.0, 3.2.1, 3.1.3, 3.1.2, 3.1.1, 3.0.1
Reporter: Bobby Wang
_val df = spark.range(0, 100, 1, 50).repartition(4)_
_val v = df.rdd.mapPartitions { iter => {_
_Iterator.single(iter.length)_
{_}}{_}{_}.collect(){_}
_println(v.mkString(","))_
The above simple code outputs `50,0,0,50`, which means there is no data in partition 1 and partition 2.
I just debugged it and found the RoundRobin seems to ensure to distribute the records evenly **in the same partition**, and not guarantee it between partitions.
Below is the code to generate the key
``` scala
case RoundRobinPartitioning(numPartitions) =>
// Distributes elements evenly across output partitions, starting from a random partition.
var position = new Random(TaskContext.get().partitionId()).nextInt(numPartitions)
(row: InternalRow) => {
// The HashPartitioner will handle the `mod` by the number of partitions
position += 1
position
}
```
In this case, There are 50 partitions, each partition will only compute 2 elements. The issue for RoundRobin here is it always starts with *position=2* to do the Roundrobin.
See the output of Random
``` scala
scala> (1 to 200).foreach(partitionId => print(new Random(partitionId).nextInt(4) + " ")) // the position is always 2.
2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2
```
Similarly, the below Random code also outputs the same value,
(1 to 200).foreach(partitionId => print(new Random(partitionId).nextInt(2) + " "))
(1 to 200).foreach(partitionId => print(new Random(partitionId).nextInt(4) + " "))
(1 to 200).foreach(partitionId => print(new Random(partitionId).nextInt(8) + " "))
(1 to 200).foreach(partitionId => print(new Random(partitionId).nextInt(16) + " "))
(1 to 200).foreach(partitionId => print(new Random(partitionId).nextInt(32) + " "))
Let's go back to this case,
Consider partition 0, the total elements are [0, 1], so when shuffle writes, for element 0, the key will be (position + 1) = 2 + 1 = 3%4=3, the element 1, the key will be (position + 1)=(3+1)=4%4 = 0
consider partition 1, the total elements are [2, 3], so when shuffle writes, for element 2, the key will be (position + 1) = 2 + 1 = 3%4=3, the element 3, the key will be (position + 1)=(3+1)=4%4 = 0
The calculation is also applied for other left partitions since the starting position is always 2 for this case.
So, as you can see, each partition will write its elements to Partition [0, 3], which results in Partition [1, 2] without any data.
I will try to provide the patch to fix this issue.
--
This message was sent by Atlassian Jira
(v8.20.10#820010)
---------------------------------------------------------------------
To unsubscribe, e-mail: issues-unsubscribe@spark.apache.org
For additional commands, e-mail: issues-help@spark.apache.org