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Posted to commits@taverna.apache.org by re...@apache.org on 2015/03/26 19:52:24 UTC

[35/51] [partial] incubator-taverna-workbench git commit: all packages are moved to org.apache.taverna.*

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/a9a52bd5/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/NewEditPasswordEntryDialog.java
----------------------------------------------------------------------
diff --git a/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/NewEditPasswordEntryDialog.java b/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/NewEditPasswordEntryDialog.java
deleted file mode 100644
index 4bb62e0..0000000
--- a/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/NewEditPasswordEntryDialog.java
+++ /dev/null
@@ -1,397 +0,0 @@
-/*******************************************************************************
- * Copyright (C) 2007 The University of Manchester
- *
- *  Modifications to the initial code base are copyright of their
- *  respective authors, or their employers as appropriate.
- *
- *  This program is free software; you can redistribute it and/or
- *  modify it under the terms of the GNU Lesser General Public License
- *  as published by the Free Software Foundation; either version 2.1 of
- *  the License, or (at your option) any later version.
- *
- *  This program is distributed in the hope that it will be useful, but
- *  WITHOUT ANY WARRANTY; without even the implied warranty of
- *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
- *  Lesser General Public License for more details.
- *
- *  You should have received a copy of the GNU Lesser General Public
- *  License along with this program; if not, write to the Free Software
- *  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
- ******************************************************************************/
-package net.sf.taverna.t2.workbench.ui.credentialmanager;
-
-import static java.awt.BorderLayout.CENTER;
-import static java.awt.BorderLayout.SOUTH;
-import static java.awt.GridBagConstraints.HORIZONTAL;
-import static java.awt.GridBagConstraints.NONE;
-import static java.awt.GridBagConstraints.WEST;
-import static javax.swing.JOptionPane.ERROR_MESSAGE;
-import static javax.swing.JOptionPane.WARNING_MESSAGE;
-import static javax.swing.JOptionPane.showMessageDialog;
-import static net.sf.taverna.t2.workbench.ui.credentialmanager.CMStrings.ALERT_TITLE;
-import static net.sf.taverna.t2.workbench.ui.credentialmanager.CMStrings.ERROR_TITLE;
-import static net.sf.taverna.t2.workbench.ui.credentialmanager.CMStrings.WARN_TITLE;
-
-import java.awt.BorderLayout;
-import java.awt.FlowLayout;
-import java.awt.GridBagConstraints;
-import java.awt.GridBagLayout;
-import java.awt.Insets;
-import java.awt.event.ActionEvent;
-import java.awt.event.ActionListener;
-import java.awt.event.WindowAdapter;
-import java.awt.event.WindowEvent;
-import java.net.URI;
-import java.net.URISyntaxException;
-import java.util.List;
-
-import javax.swing.JButton;
-import javax.swing.JDialog;
-import javax.swing.JFrame;
-import javax.swing.JLabel;
-import javax.swing.JPasswordField;
-import javax.swing.JTextField;
-import javax.swing.JPanel;
-import javax.swing.border.CompoundBorder;
-import javax.swing.border.EmptyBorder;
-import javax.swing.border.EtchedBorder;
-
-import org.apache.log4j.Logger;
-
-import org.apache.taverna.security.credentialmanager.CMException;
-import org.apache.taverna.security.credentialmanager.CredentialManager;
-import net.sf.taverna.t2.workbench.helper.NonBlockedHelpEnabledDialog;
-
-/**
- * Dialog used for editing or entering new service URI, username or password for
- * a password entry.
- *
- * @author Alex Nenadic
- */
-@SuppressWarnings("serial")
-public class NewEditPasswordEntryDialog extends NonBlockedHelpEnabledDialog
-{
-	private static final Logger logger = Logger
-			.getLogger(NewEditPasswordEntryDialog.class);
-	/** 'Edit' mode constant - the dialog is in the 'edit' entry mode */
-	private static final String EDIT_MODE = "EDIT";
-	/** 'New' mode constant - the dialog is in the 'new' entry mode */
-	private static final String NEW_MODE = "NEW";
-
-	/**
-	 * Mode of this dialog - {@link #NEW_MODE} for entering new password entry
-	 * and {@link #EDIT_MODE} for editting an existing password entry
-	 */
-	String mode;
-	/** Service URI field */
-	private JTextField serviceURIField;
-	/** Username field */
-	private JTextField usernameField;
-	/** First password entry field */
-	private JPasswordField passwordField;
-	/** Password confirmation entry field */
-	private JPasswordField passwordConfirmField;
-	/** Stores service URI entered */
-	private URI serviceURI;
-	/** Stores previous service URI for {@link #EDIT_MODE} */
-	private URI serviceURIOld;
-	/** Stores username entered */
-	private String username;
-    /** Stores password entered*/
-    private String password;
-    private CredentialManager credentialManager;
-
-	public NewEditPasswordEntryDialog(JFrame parent, String title,
-			boolean modal, URI currentURI, String currentUsername,
-			String currentPassword, CredentialManager credentialManager) {
-		super(parent, title, modal);
-		serviceURI = currentURI;
-		username = currentUsername;
-		password = currentPassword;
-		this.credentialManager = credentialManager;
-		if (serviceURI == null && username == null && password == null) {
-			// if passed values are all null
-        	mode = NEW_MODE; // dialog is for entering a new password entry
-		} else {
-            mode = EDIT_MODE; // dialog is for editing an existing entry
-            serviceURIOld = currentURI;
-        }
-        initComponents();
-    }
-
-	public NewEditPasswordEntryDialog(JDialog parent, String title,
-			boolean modal, URI currentURI, String currentUsername,
-			String currentPassword, CredentialManager credentialManager) {
-		super(parent, title, modal);
-        serviceURI = currentURI;
-        username = currentUsername;
-        password = currentPassword;
-		this.credentialManager = credentialManager;
-		if (serviceURI == null && username == null && password == null) {
-			// if passed values are all null
-        	mode = NEW_MODE; // dialog is for entering new password entry
-		} else {
-            mode = EDIT_MODE; // dialog is for editing existing entry
-            serviceURIOld = currentURI;
-        }
-        initComponents();
-    }
-
-	private void initComponents() {
-		getContentPane().setLayout(new BorderLayout());
-
-        JLabel serviceURILabel = new JLabel("Service URI");
-        serviceURILabel.setBorder(new EmptyBorder(0,5,0,0));
-
-        JLabel usernameLabel = new JLabel("Username");
-        usernameLabel.setBorder(new EmptyBorder(0,5,0,0));
-
-        JLabel passwordLabel = new JLabel("Password");
-        passwordLabel.setBorder(new EmptyBorder(0,5,0,0));
-
-        JLabel passwordConfirmLabel = new JLabel("Confirm password");
-        passwordConfirmLabel.setBorder(new EmptyBorder(0,5,0,0));
-
-        serviceURIField = new JTextField();
-        //jtfServiceURI.setBorder(new EmptyBorder(0,0,0,5));
-
-        usernameField = new JTextField(15);
-        //jtfUsername.setBorder(new EmptyBorder(0,0,0,5));
-
-        passwordField = new JPasswordField(15);
-        //jpfFirstPassword.setBorder(new EmptyBorder(0,0,0,5));
-
-        passwordConfirmField = new JPasswordField(15);
-        //jpfConfirmPassword.setBorder(new EmptyBorder(0,0,0,5));
-
-        //If in EDIT_MODE - populate the fields with current values
-		if (mode.equals(EDIT_MODE)) {
-			serviceURIField.setText(serviceURI.toASCIIString());
-			usernameField.setText(username);
-			passwordField.setText(password);
-			passwordConfirmField.setText(password);
-		}
-
-		JButton okButton = new JButton("OK");
-		okButton.addActionListener(new ActionListener() {
-			@Override
-			public void actionPerformed(ActionEvent evt) {
-				okPressed();
-			}
-		});
-
-		JButton cancelButton = new JButton("Cancel");
-		cancelButton.addActionListener(new ActionListener() {
-			@Override
-			public void actionPerformed(ActionEvent evt) {
-				cancelPressed();
-			}
-		});
-
-		JPanel passwordPanel = new JPanel(new GridBagLayout());
-
-		GridBagConstraints gbc = new GridBagConstraints();
-		gbc.weighty = 0.0;
-
-		gbc.weightx = 0.0;
-		gbc.gridx = 0;
-		gbc.gridy = 0;
-		gbc.fill = NONE;
-		gbc.anchor = WEST;
-		gbc.insets = new Insets(5, 10, 0, 0);
-        passwordPanel.add(serviceURILabel, gbc);
-
-		gbc.weightx = 1.0;
-		gbc.gridx = 1;
-		gbc.gridy = 0;
-		gbc.fill = HORIZONTAL;
-		gbc.anchor = WEST;
-		gbc.insets = new Insets(5, 10, 0, 5);
-        passwordPanel.add(serviceURIField, gbc);
-
-		gbc.weightx = 0.0;
-		gbc.gridx = 0;
-		gbc.gridy = 1;
-		gbc.fill = NONE;
-		gbc.anchor = WEST;
-		gbc.insets = new Insets(5, 10, 0, 0);
-        passwordPanel.add(usernameLabel, gbc);
-
-		gbc.weightx = 1.0;
-		gbc.gridx = 1;
-		gbc.gridy = 1;
-		gbc.fill = HORIZONTAL;
-		gbc.anchor = WEST;
-		gbc.insets = new Insets(5, 10, 0, 5);
-        passwordPanel.add(usernameField, gbc);
-
-		gbc.weightx = 0.0;
-		gbc.gridx = 0;
-		gbc.gridy = 2;
-		gbc.fill = NONE;
-		gbc.anchor = WEST;
-		gbc.insets = new Insets(5, 10, 0, 0);
-        passwordPanel.add(passwordLabel, gbc);
-
-		gbc.weightx = 1.0;
-		gbc.gridx = 1;
-		gbc.gridy = 2;
-		gbc.fill = HORIZONTAL;
-		gbc.anchor = WEST;
-		gbc.insets = new Insets(5, 10, 0, 5);
-        passwordPanel.add(passwordField, gbc);
-
-		gbc.weightx = 0.0;
-		gbc.gridx = 0;
-		gbc.gridy = 3;
-		gbc.fill = NONE;
-		gbc.anchor = WEST;
-		gbc.insets = new Insets(5, 10, 0, 0);
-        passwordPanel.add(passwordConfirmLabel, gbc);
-
-		gbc.weightx = 1.0;
-		gbc.gridx = 1;
-		gbc.gridy = 3;
-		gbc.fill = HORIZONTAL;
-		gbc.anchor = WEST;
-		gbc.insets = new Insets(5, 10, 0, 5);
-		passwordPanel.add(passwordConfirmField, gbc);
-
-		passwordPanel.setBorder(new CompoundBorder(new EmptyBorder(10, 10, 10,
-				10), new EtchedBorder()));
-
-		JPanel buttonsPanel = new JPanel(new FlowLayout(FlowLayout.CENTER));
-		buttonsPanel.add(okButton);
-		buttonsPanel.add(cancelButton);
-
-		getContentPane().add(passwordPanel, CENTER);
-		getContentPane().add(buttonsPanel, SOUTH);
-
-		addWindowListener(new WindowAdapter() {
-			@Override
-			public void windowClosing(WindowEvent evt) {
-				closeDialog();
-			}
-		});
-
-        //setResizable(false);
-        getRootPane().setDefaultButton(okButton);
-        pack();
-    }
-
-	/**
-	 * Get the username entered in the dialog.
-	 */
-	public String getUsername() {
-		return username;
-	}
-
-	/**
-	 * Get the service URI entered in the dialog.
-	 */
-	public URI getServiceURI() {
-		return serviceURI;
-	}
-
-	/**
-	 * Get the password entered in the dialog.
-	 */
-	public String getPassword() {
-		return password;
-	}
-
-	/**
-	 * Checks that the user has entered a non-empty service URI, a non-empty
-	 * username, a non-empty password and that an entry with the same URI
-	 * already does not already exist in the Keystore. Store the new password.
-	 */
-	private boolean checkControls() {
-		String serviceURIString = new String(serviceURIField.getText());
-		if (serviceURIString.isEmpty()) {
-			showMessageDialog(this, "Service URI cannot be empty",
-					WARN_TITLE, WARNING_MESSAGE);
-			return false;
-		}
-    	try {
-			serviceURI = new URI(serviceURIString);
-		} catch (URISyntaxException e) {
-			showMessageDialog(this, "Service URI is not a valid URI",
-					WARN_TITLE, WARNING_MESSAGE);
-			return false;
-		}
-
-		username = new String(usernameField.getText());
-		if (username.isEmpty()) {
-			showMessageDialog(this, "Username cannot be empty", WARN_TITLE,
-					WARNING_MESSAGE);
-			return false;
-		}
-
-		String firstPassword = new String(passwordField.getPassword());
-		String confirmPassword = new String(passwordConfirmField.getPassword());
-
-		if (!firstPassword.equals(confirmPassword)) {
-			// passwords do not match
-			showMessageDialog(this, "Passwords do not match", WARN_TITLE,
-					WARNING_MESSAGE);
-			return false;
-		}
-		if (firstPassword.isEmpty()) {
-			// passwords match but are empty
-			showMessageDialog(this, "Password cannot be empty", WARN_TITLE,
-					WARNING_MESSAGE);
-			return false;
-		}
-
-		// passwords the same and non-empty
-		password = firstPassword;
-
-		// Check if the entered service URL is already associated with another password entry in the Keystore
-    	List<URI> uriList = null;
-    	try {
-			uriList = credentialManager.getServiceURIsForAllUsernameAndPasswordPairs();
-		} catch (CMException cme) {
-			// Failed to instantiate Credential Manager - warn the user and exit
-			String exMessage = "Failed to instantiate Credential Manager to check for duplicate service URIs.";
-			logger.error(exMessage, cme);
-			showMessageDialog(new JFrame(), exMessage, ERROR_TITLE,
-					ERROR_MESSAGE);
-			return false;
-		}
-
-       	if (uriList != null) { // should not be null really (although can be empty). Check anyway.
-       		if (mode.equals(EDIT_MODE)) // edit mode
-            	// Remove the current entry's service URI from the list
-                uriList.remove(serviceURIOld);
-
-   			if (uriList.contains(serviceURI)) { // found another entry for this service URI
-        		// Warn the user and exit
-				showMessageDialog(
-						this,
-						"The entered service URI is already associated with another password entry",
-						ALERT_TITLE, WARNING_MESSAGE);
-				return false;
-			}
-		}
-
-		return true;
-	}
-
-	private void okPressed() {
-		if (checkControls())
-			closeDialog();
-	}
-
-	private void cancelPressed() {
-    	// Set all fields to null to indicate that cancel button was pressed
-		serviceURI = null;
-		username = null;
-		password = null;
-		closeDialog();
-	}
-
-	private void closeDialog() {
-		setVisible(false);
-		dispose();
-	}
-}

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/a9a52bd5/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/NewKeyPairEntryDialog.java
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diff --git a/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/NewKeyPairEntryDialog.java b/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/NewKeyPairEntryDialog.java
deleted file mode 100644
index 2915f65..0000000
--- a/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/NewKeyPairEntryDialog.java
+++ /dev/null
@@ -1,304 +0,0 @@
-/*******************************************************************************
- * Copyright (C) 2007 The University of Manchester   
- * 
- *  Modifications to the initial code base are copyright of their
- *  respective authors, or their employers as appropriate.
- * 
- *  This program is free software; you can redistribute it and/or
- *  modify it under the terms of the GNU Lesser General Public License
- *  as published by the Free Software Foundation; either version 2.1 of
- *  the License, or (at your option) any later version.
- *    
- *  This program is distributed in the hope that it will be useful, but
- *  WITHOUT ANY WARRANTY; without even the implied warranty of
- *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
- *  Lesser General Public License for more details.
- *    
- *  You should have received a copy of the GNU Lesser General Public
- *  License along with this program; if not, write to the Free Software
- *  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
- ******************************************************************************/
-package net.sf.taverna.t2.workbench.ui.credentialmanager;
-
-import static java.awt.BorderLayout.CENTER;
-import static java.awt.BorderLayout.SOUTH;
-import static java.awt.BorderLayout.WEST;
-import static java.awt.Font.PLAIN;
-import static javax.swing.BoxLayout.Y_AXIS;
-import static javax.swing.JOptionPane.ERROR_MESSAGE;
-import static javax.swing.JOptionPane.WARNING_MESSAGE;
-import static javax.swing.JOptionPane.showMessageDialog;
-import static javax.swing.ListSelectionModel.SINGLE_SELECTION;
-import static javax.swing.ScrollPaneConstants.HORIZONTAL_SCROLLBAR_AS_NEEDED;
-import static javax.swing.ScrollPaneConstants.VERTICAL_SCROLLBAR_AS_NEEDED;
-import static net.sf.taverna.t2.workbench.ui.credentialmanager.CMStrings.ALERT_TITLE;
-import static net.sf.taverna.t2.workbench.ui.credentialmanager.CMStrings.ERROR_TITLE;
-
-import java.awt.BorderLayout;
-import java.awt.FlowLayout;
-import java.awt.Font;
-import java.awt.event.ActionEvent;
-import java.awt.event.ActionListener;
-import java.awt.event.WindowAdapter;
-import java.awt.event.WindowEvent;
-import java.security.GeneralSecurityException;
-import java.security.Key;
-import java.security.KeyStore;
-import java.security.cert.Certificate;
-import java.security.cert.X509Certificate;
-import java.util.ArrayList;
-import java.util.Enumeration;
-import java.util.List;
-
-import javax.swing.BoxLayout;
-import javax.swing.JButton;
-import javax.swing.JDialog;
-import javax.swing.JFrame;
-import javax.swing.JLabel;
-import javax.swing.JList;
-import javax.swing.JPanel;
-import javax.swing.JScrollPane;
-import javax.swing.border.EmptyBorder;
-import javax.swing.event.ListSelectionEvent;
-import javax.swing.event.ListSelectionListener;
-
-import org.apache.taverna.security.credentialmanager.CMException;
-import org.apache.taverna.security.credentialmanager.DistinguishedNameParser;
-import net.sf.taverna.t2.workbench.helper.NonBlockedHelpEnabledDialog;
-
-/**
- * Allows the user import a key pair from a PKCS #12 file (keystore).
- */
-@SuppressWarnings("serial")
-class NewKeyPairEntryDialog extends NonBlockedHelpEnabledDialog {
-	//private static final Logger logger = Logger.getLogger(NewKeyPairEntryDialog.class);
-
-	/** List of key pairs available for import */
-	private JList<String> keyPairsJList;
-	/** PKCS #12 keystore */
-	private KeyStore pkcs12KeyStore;
-	/** Private key part of the key pair chosen by the user for import */
-	private Key privateKey;
-	/** Certificate chain part of the key pair chosen by the user for import */
-	private Certificate[] certificateChain;
-	/** Key pair alias to be used for this entry in the Keystore */
-	private String alias;
-	private final DistinguishedNameParser dnParser;
-
-	public NewKeyPairEntryDialog(JFrame parent, String title, boolean modal,
-			KeyStore pkcs12KeyStore, DistinguishedNameParser dnParser)
-			throws CMException {
-		super(parent, title, modal);
-		this.pkcs12KeyStore = pkcs12KeyStore;
-		this.dnParser = dnParser;
-		initComponents();
-	}
-
-	public NewKeyPairEntryDialog(JDialog parent, String title, boolean modal,
-			KeyStore pkcs12KeyStore, DistinguishedNameParser dnParser)
-			throws CMException {
-		super(parent, title, modal);
-		this.pkcs12KeyStore = pkcs12KeyStore;
-		this.dnParser = dnParser;
-		initComponents();
-	}
-
-	/**
-	 * Get the private part of the key pair.
-	 */
-	public Key getPrivateKey() {
-		return privateKey;
-	}
-
-	/**
-	 * Get the certificate chain part of the key pair.
-	 */
-	public Certificate[] getCertificateChain() {
-		return certificateChain;
-	}
-
-	/**
-	 * Get the keystore alias of the key pair.
-	 */
-	public String getAlias() {
-		return alias;
-	}
-
-	private void initComponents() throws CMException {
-		// Instructions
-		JLabel instructionsLabel = new JLabel("Select a key pair to import:");
-		instructionsLabel.setFont(new Font(null, PLAIN, 11));
-		instructionsLabel.setBorder(new EmptyBorder(5, 5, 5, 5));
-		JPanel instructionsPanel = new JPanel(new BorderLayout());
-		instructionsPanel.add(instructionsLabel, WEST);
-
-		// Import button
-		final JButton importButton = new JButton("Import");
-		importButton.setEnabled(false);
-		importButton.addActionListener(new ActionListener() {
-			@Override
-			public void actionPerformed(ActionEvent evt) {
-				importPressed();
-			}
-		});
-
-		// Certificate details button
-		final JButton certificateDetailsButton = new JButton("Details");
-		certificateDetailsButton.setEnabled(false);
-		certificateDetailsButton.addActionListener(new ActionListener() {
-			@Override
-			public void actionPerformed(ActionEvent evt) {
-				certificateDetailsPressed();
-			}
-		});
-
-        // List to hold keystore's key pairs
-		keyPairsJList = new JList<>();
-		keyPairsJList.setSelectionMode(SINGLE_SELECTION);
-		keyPairsJList.addListSelectionListener(new ListSelectionListener() {
-			@Override
-			public void valueChanged(ListSelectionEvent evt) {
-				boolean enabled = keyPairsJList.getSelectedIndex() >= 0;
-				importButton.setEnabled(enabled);
-				certificateDetailsButton.setEnabled(enabled);
-			}
-		});
-
-        // Put the key list into a scroll pane
-		JScrollPane keyPairsScrollPane = new JScrollPane(keyPairsJList,
-				VERTICAL_SCROLLBAR_AS_NEEDED, HORIZONTAL_SCROLLBAR_AS_NEEDED);
-		keyPairsScrollPane.getViewport().setBackground(
-				keyPairsJList.getBackground());
-        
-        JPanel keyPairsPanel = new JPanel();
-        keyPairsPanel.setLayout(new BoxLayout(keyPairsPanel, Y_AXIS));
-		keyPairsPanel.setBorder(new EmptyBorder(10, 10, 10, 10));
-
-		instructionsPanel.setAlignmentY(LEFT_ALIGNMENT);
-		keyPairsPanel.add(instructionsPanel);
-		keyPairsScrollPane.setAlignmentY(LEFT_ALIGNMENT);
-		keyPairsPanel.add(keyPairsScrollPane);
-
-		// Cancel button
-		final JButton cancelButton = new JButton("Cancel");
-		cancelButton.addActionListener(new ActionListener() {
-			@Override
-			public void actionPerformed(ActionEvent evt) {
-				cancelPressed();
-			}
-		});
-
-		JPanel buttonsPanel = new JPanel(new FlowLayout(FlowLayout.CENTER));
-		buttonsPanel.add(certificateDetailsButton);
-		buttonsPanel.add(importButton);
-		buttonsPanel.add(cancelButton);
-
-		getContentPane().setLayout(new BorderLayout());
-		getContentPane().add(keyPairsPanel, CENTER);
-		getContentPane().add(buttonsPanel, SOUTH);
-
-		// Populate the list
-		populateKeyPairList();
-
-		addWindowListener(new WindowAdapter() {
-			@Override
-			public void windowClosing(WindowEvent evt) {
-				closeDialog();
-			}
-		});
-
-		setResizable(false);
-		getRootPane().setDefaultButton(importButton);
-		pack();
-	}
-
-	/**
-	 * Populate the key pair list with the PKCS #12 keystore's key pair aliases.
-	 */
-	private void populateKeyPairList() throws CMException {
-		try {
-			List<String> keyPairAliases = new ArrayList<>();
-
-			Enumeration<String> aliases = pkcs12KeyStore.aliases();
-			while (aliases.hasMoreElements()) {
-				String alias = aliases.nextElement();
-
-				if (pkcs12KeyStore.isKeyEntry(alias)) {
-					pkcs12KeyStore.getKey(alias, new char[] {});
-					Certificate[] certs = pkcs12KeyStore
-							.getCertificateChain(alias);
-					if (certs != null && certs.length != 0)
-						keyPairAliases.add(alias);
-				}
-			}
-
-            if (!keyPairAliases.isEmpty()) {
-                keyPairsJList.setListData(keyPairAliases.toArray(new String[0]));
-                keyPairsJList.setSelectedIndex(0);
-			} else
-                // No key pairs were found - warn the user
-				showMessageDialog(this,
-						"No private key pairs were found in the file",
-						ALERT_TITLE, WARNING_MESSAGE);
-		} catch (GeneralSecurityException ex) {
-            throw new CMException("Problem occured while reading the PKCS #12 file.",
-                ex);
-        }
-    }
-
-	/**
-	 * Display the selected key pair's certificate.
-	 */
-	private void certificateDetailsPressed() {
-		try {
-			String alias = (String) keyPairsJList.getSelectedValue();
-
-			// Convert the certificate object into an X509Certificate object.
-			X509Certificate cert = dnParser.convertCertificate(pkcs12KeyStore
-					.getCertificate(alias));
-
-			ViewCertDetailsDialog viewCertificateDialog = new ViewCertDetailsDialog(
-					this, "Certificate details", true, (X509Certificate) cert,
-					null, dnParser);
-			viewCertificateDialog.setLocationRelativeTo(this);
-			viewCertificateDialog.setVisible(true);
-		} catch (Exception ex) {
-			showMessageDialog(this,
-					"Failed to obtain certificate details to show",
-					ALERT_TITLE, WARNING_MESSAGE);
-			closeDialog();
-		}
-	}
-
-	public void importPressed() {
-		String alias = (String) keyPairsJList.getSelectedValue();
-		try {
-			privateKey = pkcs12KeyStore.getKey(alias, new char[] {});
-			certificateChain = pkcs12KeyStore.getCertificateChain(alias);
-			this.alias = alias;
-		} catch (Exception ex) {
-			showMessageDialog(
-					this,
-					"Failed to load the private key and certificate chain from the PKCS #12 file.",
-					ERROR_TITLE, ERROR_MESSAGE);
-		}
-
-        closeDialog();
-    }
-
-	public void cancelPressed() {
-		/*
-		 * Set everything to null, just in case some of the values have been set
-		 * previously and the user pressed 'cancel' after that.
-		 */
-		privateKey = null;
-		certificateChain = null;
-		closeDialog();
-	}
-
-	private void closeDialog() {
-		setVisible(false);
-		dispose();
-	}
-
-}

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/a9a52bd5/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/NewTrustCertsDialog.java
----------------------------------------------------------------------
diff --git a/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/NewTrustCertsDialog.java b/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/NewTrustCertsDialog.java
deleted file mode 100644
index 7841f1c..0000000
--- a/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/NewTrustCertsDialog.java
+++ /dev/null
@@ -1,248 +0,0 @@
-/*******************************************************************************
- * Copyright (C) 2007 The University of Manchester   
- * 
- *  Modifications to the initial code base are copyright of their
- *  respective authors, or their employers as appropriate.
- * 
- *  This program is free software; you can redistribute it and/or
- *  modify it under the terms of the GNU Lesser General Public License
- *  as published by the Free Software Foundation; either version 2.1 of
- *  the License, or (at your option) any later version.
- *    
- *  This program is distributed in the hope that it will be useful, but
- *  WITHOUT ANY WARRANTY; without even the implied warranty of
- *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
- *  Lesser General Public License for more details.
- *    
- *  You should have received a copy of the GNU Lesser General Public
- *  License along with this program; if not, write to the Free Software
- *  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
- ******************************************************************************/
-package net.sf.taverna.t2.workbench.ui.credentialmanager;
-
-import static java.awt.BorderLayout.CENTER;
-import static java.awt.BorderLayout.SOUTH;
-import static java.awt.BorderLayout.WEST;
-import static java.awt.Font.PLAIN;
-import static javax.security.auth.x500.X500Principal.RFC2253;
-import static javax.swing.BoxLayout.Y_AXIS;
-import static javax.swing.JOptionPane.WARNING_MESSAGE;
-import static javax.swing.JOptionPane.showMessageDialog;
-import static javax.swing.ListSelectionModel.MULTIPLE_INTERVAL_SELECTION;
-import static javax.swing.ScrollPaneConstants.HORIZONTAL_SCROLLBAR_AS_NEEDED;
-import static javax.swing.ScrollPaneConstants.VERTICAL_SCROLLBAR_AS_NEEDED;
-import static net.sf.taverna.t2.workbench.ui.credentialmanager.CMStrings.ALERT_TITLE;
-
-import java.awt.BorderLayout;
-import java.awt.FlowLayout;
-import java.awt.Font;
-import java.awt.event.ActionEvent;
-import java.awt.event.ActionListener;
-import java.awt.event.WindowAdapter;
-import java.awt.event.WindowEvent;
-import java.security.cert.X509Certificate;
-import java.util.ArrayList;
-
-import javax.swing.BoxLayout;
-import javax.swing.JButton;
-import javax.swing.JDialog;
-import javax.swing.JFrame;
-import javax.swing.JLabel;
-import javax.swing.JList;
-import javax.swing.JPanel;
-import javax.swing.JScrollPane;
-import javax.swing.border.CompoundBorder;
-import javax.swing.border.EmptyBorder;
-import javax.swing.border.EtchedBorder;
-import javax.swing.event.ListSelectionEvent;
-import javax.swing.event.ListSelectionListener;
-
-import org.apache.taverna.security.credentialmanager.DistinguishedNameParser;
-import org.apache.taverna.security.credentialmanager.ParsedDistinguishedName;
-import net.sf.taverna.t2.workbench.helper.NonBlockedHelpEnabledDialog;
-
-/**
- * Allows the user to import one or more trusted certificates from a file.
- */
-@SuppressWarnings("serial")
-public class NewTrustCertsDialog extends NonBlockedHelpEnabledDialog {
-	private JList<String> trustedCertsJList;
-	/** List of trusted certs read from the file and available for import */
-	private ArrayList<X509Certificate> availableTrustedCerts = new ArrayList<>();
-	/** List of trusted certs selected for import */
-	private ArrayList<X509Certificate> selectedTrustedCerts;
-	private final DistinguishedNameParser dnParser;
-
-	public NewTrustCertsDialog(JFrame parent, String title, boolean modal,
-			ArrayList<X509Certificate> lCerts, DistinguishedNameParser dnParser) {
-		super(parent, title, modal);
-		availableTrustedCerts = lCerts;
-		this.dnParser = dnParser;
-		initComponents();
-	}
-
-	public NewTrustCertsDialog(JDialog parent, String title, boolean modal,
-			ArrayList<X509Certificate> lCerts, DistinguishedNameParser dnParser) {
-		super(parent, title, modal);
-		availableTrustedCerts = lCerts;
-		this.dnParser = dnParser;
-		initComponents();
-	}
-
-	private void initComponents() {
-		// Instructions
-		JLabel instructionsLabel = new JLabel(
-				"Select one or more certificates for import:");
-		instructionsLabel.setFont(new Font(null, PLAIN, 11));
-		instructionsLabel.setBorder(new EmptyBorder(5, 5, 5, 5));
-		JPanel instructionsPanel = new JPanel(new BorderLayout());
-		instructionsPanel.add(instructionsLabel, WEST);
-
-		// Import button
-		final JButton importButton = new JButton("Import");
-		importButton.setEnabled(false);
-		importButton.addActionListener(new ActionListener() {
-			@Override
-			public void actionPerformed(ActionEvent evt) {
-				importPressed();
-			}
-		});
-
-		// Certificate details button
-		final JButton certificateDetailsButton = new JButton(
-				"Certificate Details");
-		certificateDetailsButton.setEnabled(false);
-		certificateDetailsButton.addActionListener(new ActionListener() {
-			@Override
-			public void actionPerformed(ActionEvent evt) {
-				certificateDetailsPressed();
-			}
-		});
-
-		// List with trusted certs' aliases
-		trustedCertsJList = new JList<>();
-		trustedCertsJList.setSelectionMode(MULTIPLE_INTERVAL_SELECTION);
-		trustedCertsJList.addListSelectionListener(new ListSelectionListener() {
-			@Override
-			public void valueChanged(ListSelectionEvent evt) {
-				boolean enabled = trustedCertsJList.getSelectedIndex() >= 0;
-				importButton.setEnabled(enabled);
-				certificateDetailsButton.setEnabled(enabled);
-			}
-		});
-		// Populate the list - get the certificate subjects' CNs
-		ArrayList<String> cns = new ArrayList<>();
-		for (int i = 0; i < availableTrustedCerts.size(); i++) {
-			String subjectDN = ((X509Certificate) availableTrustedCerts.get(i))
-					.getSubjectX500Principal().getName(RFC2253);
-			ParsedDistinguishedName parsedDN = dnParser.parseDN(subjectDN);
-			String subjectCN = parsedDN.getCN();
-			cns.add(i, subjectCN);
-		}
-		trustedCertsJList.setListData(cns.toArray(new String[0]));
-		trustedCertsJList.setSelectedIndex(0);
-
-		// Put the list into a scroll pane
-		JScrollPane trustedCertsScrollPanel = new JScrollPane(
-				trustedCertsJList, VERTICAL_SCROLLBAR_AS_NEEDED,
-				HORIZONTAL_SCROLLBAR_AS_NEEDED);
-		trustedCertsScrollPanel.getViewport().setBackground(
-				trustedCertsJList.getBackground());
-
-		JPanel trustedCertsPanel = new JPanel();
-		trustedCertsPanel.setLayout(new BoxLayout(trustedCertsPanel, Y_AXIS));
-		trustedCertsPanel.setBorder(new CompoundBorder(new CompoundBorder(
-				new EmptyBorder(5, 5, 5, 5), new EtchedBorder()),
-				new EmptyBorder(5, 5, 5, 5)));
-
-		instructionsPanel.setAlignmentY(LEFT_ALIGNMENT);
-		trustedCertsPanel.add(instructionsPanel);
-		trustedCertsScrollPanel.setAlignmentY(LEFT_ALIGNMENT);
-		trustedCertsPanel.add(trustedCertsScrollPanel);
-		certificateDetailsButton.setAlignmentY(RIGHT_ALIGNMENT);
-		trustedCertsPanel.add(certificateDetailsButton);
-
-		// Cancel button
-		final JButton cancelButton = new JButton("Cancel");
-		cancelButton.addActionListener(new ActionListener() {
-			@Override
-			public void actionPerformed(ActionEvent evt) {
-				cancelPressed();
-			}
-		});
-
-		JPanel jpButtons = new JPanel(new FlowLayout(FlowLayout.CENTER));
-		jpButtons.add(importButton);
-		jpButtons.add(cancelButton);
-
-		getContentPane().setLayout(new BorderLayout());
-		getContentPane().add(trustedCertsPanel, CENTER);
-		getContentPane().add(jpButtons, SOUTH);
-
-		addWindowListener(new WindowAdapter() {
-			@Override
-			public void windowClosing(WindowEvent evt) {
-				closeDialog();
-			}
-		});
-
-		setResizable(false);
-		getRootPane().setDefaultButton(importButton);
-		pack();
-	}
-
-	/**
-	 * Shows the selected key pair's certificate.
-	 */
-	private void certificateDetailsPressed() {
-		try {
-			int i = trustedCertsJList.getSelectedIndex();
-
-			X509Certificate cert = (X509Certificate) availableTrustedCerts
-					.get(i);
-
-			ViewCertDetailsDialog viewCertificateDialog = new ViewCertDetailsDialog(
-					this, "Certificate details", true, cert, null, dnParser);
-			viewCertificateDialog.setLocationRelativeTo(this);
-			viewCertificateDialog.setVisible(true);
-		} catch (Exception ex) {
-			showMessageDialog(this,
-					"Failed to obtain certificate details to show",
-					ALERT_TITLE, WARNING_MESSAGE);
-			closeDialog();
-		}
-	}
-
-	/**
-	 * Get the trusted certificates selected for import.
-	 */
-	public ArrayList<X509Certificate> getTrustedCertificates() {
-		return selectedTrustedCerts;
-	}
-
-	/**
-	 * Store the selected trusted certs.
-	 */
-	public void importPressed() {
-		int[] selectedValues = trustedCertsJList.getSelectedIndices();
-		selectedTrustedCerts = new ArrayList<>();
-		for (int i = 0; i < selectedValues.length; i++)
-			selectedTrustedCerts.add(availableTrustedCerts
-					.get(selectedValues[i]));
-		closeDialog();
-	}
-
-	public void cancelPressed() {
-		/*
-		 * Set selectedTrustCerts to null to indicate that user has cancelled
-		 * the import
-		 */
-		selectedTrustedCerts = null;
-		closeDialog();
-	}
-
-	private void closeDialog() {
-		setVisible(false);
-		dispose();
-	}
-}

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/a9a52bd5/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/PasswordsTableModel.java
----------------------------------------------------------------------
diff --git a/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/PasswordsTableModel.java b/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/PasswordsTableModel.java
deleted file mode 100644
index a069c73..0000000
--- a/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/PasswordsTableModel.java
+++ /dev/null
@@ -1,227 +0,0 @@
-/*******************************************************************************
- * Copyright (C) 2007 The University of Manchester
- *
- *  Modifications to the initial code base are copyright of their
- *  respective authors, or their employers as appropriate.
- *
- *  This program is free software; you can redistribute it and/or
- *  modify it under the terms of the GNU Lesser General Public License
- *  as published by the Free Software Foundation; either version 2.1 of
- *  the License, or (at your option) any later version.
- *
- *  This program is distributed in the hope that it will be useful, but
- *  WITHOUT ANY WARRANTY; without even the implied warranty of
- *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
- *  Lesser General Public License for more details.
- *
- *  You should have received a copy of the GNU Lesser General Public
- *  License along with this program; if not, write to the Free Software
- *  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
- ******************************************************************************/
-package net.sf.taverna.t2.workbench.ui.credentialmanager;
-
-import static javax.swing.JOptionPane.ERROR_MESSAGE;
-import static javax.swing.JOptionPane.showMessageDialog;
-import static org.apache.taverna.security.credentialmanager.CredentialManager.KeystoreType.KEYSTORE;
-import static net.sf.taverna.t2.workbench.ui.credentialmanager.CMStrings.ERROR_TITLE;
-import static net.sf.taverna.t2.workbench.ui.credentialmanager.CredentialManagerUI.PASSWORD_ENTRY_TYPE;
-
-import java.net.URI;
-import java.util.TreeMap;
-
-import javax.swing.JFrame;
-import javax.swing.table.AbstractTableModel;
-
-import org.apache.taverna.lang.observer.Observable;
-import org.apache.taverna.lang.observer.Observer;
-import org.apache.taverna.security.credentialmanager.CMException;
-import org.apache.taverna.security.credentialmanager.CredentialManager;
-import org.apache.taverna.security.credentialmanager.KeystoreChangedEvent;
-import org.apache.taverna.security.credentialmanager.UsernamePassword;
-
-import org.apache.log4j.Logger;
-
-/**
- * The table model used to display the Keystore's username/password pair
- * entries.
- * 
- * @author Alex Nenadic
- */
-@SuppressWarnings("serial")
-public class PasswordsTableModel extends AbstractTableModel implements
-		Observer<KeystoreChangedEvent> {
-	private static final Logger logger = Logger
-			.getLogger(PasswordsTableModel.class);
-
-	// Column names
-	private String[] columnNames;
-	// Table data
-	private Object[][] data;
-	private CredentialManager credManager;
-
-	public PasswordsTableModel(CredentialManager credentialManager) {
-		credManager = credentialManager;
-		if (credentialManager == null) {
-			// Failed to instantiate Credential Manager - warn the user and exit
-			String sMessage = "Failed to instantiate Credential Manager. ";
-			logger.error("CM GUI: " + sMessage);
-			showMessageDialog(new JFrame(), sMessage, ERROR_TITLE,
-					ERROR_MESSAGE);
-			return;
-		}
-
-		data = new Object[0][0];
-		columnNames = new String[] { "Entry Type", // type of the Keystore entry
-				"Service URL", // the service url, part of the actual alias in
-								// the Keystore
-				"Username", // username for the service, part of the password
-							// entry in the Keystore
-				"Last Modified", // last modified date of the entry
-				"Password", // the invisible column holding the password value
-							// of the password entry in the Keystore
-				"Alias" // the invisible column holding the Keystore alias of
-						// the entry
-		};
-
-		try {
-			load();
-		} catch (CMException cme) {
-			String sMessage = "Failed to load username and password pairs";
-			logger.error(sMessage);
-			showMessageDialog(new JFrame(), sMessage, ERROR_TITLE,
-					ERROR_MESSAGE);
-			return;
-		}
-
-		// Start observing changes to the Keystore
-		credManager.addObserver(this);
-	}
-
-	/**
-	 * Load the PasswordsTableModel with the password entries from the Keystore.
-	 */
-	public void load() throws CMException {
-		// Place password entries' aliases in a tree map to sort them
-		TreeMap<String, String> aliases = new TreeMap<>();
-
-		for (String alias : credManager.getAliases(KEYSTORE))
-			/*
-			 * We are only interested in username/password entries here. Alias
-			 * for such entries is constructed as "password#"<SERVICE_URL> where
-			 * service URL is the service this username/password pair is to be
-			 * used for.
-			 */
-			if (alias.startsWith("password#"))
-				aliases.put(alias, alias);
-
-		// Create one table row for each password entry
-		data = new Object[aliases.size()][6];
-
-		/*
-		 * Iterate through the sorted aliases, retrieving the password entries
-		 * and populating the table model
-		 */
-		int iCnt = 0;
-		for (String alias : aliases.values()) {
-			/*
-			 * Populate the type column - it is set with an integer but a custom
-			 * cell renderer will cause a suitable icon to be displayed
-			 */
-			data[iCnt][0] = PASSWORD_ENTRY_TYPE;
-
-			/*
-			 * Populate the service URL column as a substring of alias from the
-			 * first occurrence of '#' till the end of the string
-			 */
-			String serviceURL = alias.substring(alias.indexOf('#') + 1);
-			data[iCnt][1] = serviceURL;
-
-			/*
-			 * Get the username and password pair from the Keystore. They are
-			 * returned in a single string in format
-			 * <USERNAME><SEPARATOR_CHARACTER><PASSWORD>
-			 */
-			UsernamePassword usernamePassword = credManager
-					.getUsernameAndPasswordForService(URI.create(serviceURL),
-							false, "");
-			String username = usernamePassword.getUsername();
-			String password = usernamePassword.getPasswordAsString();
-
-			// Populate the username column
-			data[iCnt][2] = username;
-
-			// Populate the last modified date column ("UBER" keystore type
-			// supports creation date)
-			// data[iCnt][3] =
-			// credManager.getEntryCreationDate(CredentialManager.KEYSTORE,
-			// alias);
-
-			// Populate the invisible password column
-			data[iCnt][4] = password;
-
-			// Populate the invisible alias column
-			data[iCnt][5] = alias;
-
-			iCnt++;
-		}
-
-		fireTableDataChanged();
-	}
-
-	/**
-	 * Get the number of columns in the table.
-	 */
-	@Override
-	public int getColumnCount() {
-		return columnNames.length;
-	}
-
-	/**
-	 * Get the number of rows in the table.
-	 */
-	@Override
-	public int getRowCount() {
-		return data.length;
-	}
-
-	/**
-	 * Get the name of the column at the given position.
-	 */
-	@Override
-	public String getColumnName(int iCol) {
-		return columnNames[iCol];
-	}
-
-	/**
-	 * Get the cell value at the given row and column position.
-	 */
-	@Override
-	public Object getValueAt(int iRow, int iCol) {
-		return data[iRow][iCol];
-	}
-
-	/**
-	 * Get the class at of the cells at the given column position.
-	 */
-	@Override
-	public Class<? extends Object> getColumnClass(int iCol) {
-		return getValueAt(0, iCol).getClass();
-	}
-
-	/**
-	 * Is the cell at the given row and column position editable?
-	 */
-	@Override
-	public boolean isCellEditable(int iRow, int iCol) {
-		// The table is always read-only
-		return false;
-	}
-
-	@Override
-	public void notify(Observable<KeystoreChangedEvent> sender,
-			KeystoreChangedEvent message) throws Exception {
-		// reload the table
-		if (message.keystoreType.equals(KEYSTORE))
-			load();
-	}
-}

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/a9a52bd5/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/SetMasterPasswordDialog.java
----------------------------------------------------------------------
diff --git a/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/SetMasterPasswordDialog.java b/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/SetMasterPasswordDialog.java
deleted file mode 100644
index bae6068..0000000
--- a/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/SetMasterPasswordDialog.java
+++ /dev/null
@@ -1,189 +0,0 @@
-/*******************************************************************************
- * Copyright (C) 2007 The University of Manchester   
- * 
- *  Modifications to the initial code base are copyright of their
- *  respective authors, or their employers as appropriate.
- * 
- *  This program is free software; you can redistribute it and/or
- *  modify it under the terms of the GNU Lesser General Public License
- *  as published by the Free Software Foundation; either version 2.1 of
- *  the License, or (at your option) any later version.
- *    
- *  This program is distributed in the hope that it will be useful, but
- *  WITHOUT ANY WARRANTY; without even the implied warranty of
- *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
- *  Lesser General Public License for more details.
- *    
- *  You should have received a copy of the GNU Lesser General Public
- *  License along with this program; if not, write to the Free Software
- *  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
- ******************************************************************************/
-package net.sf.taverna.t2.workbench.ui.credentialmanager;
-
-import static java.awt.BorderLayout.CENTER;
-import static java.awt.BorderLayout.NORTH;
-import static java.awt.BorderLayout.SOUTH;
-import static java.awt.Font.PLAIN;
-import static javax.swing.BoxLayout.Y_AXIS;
-import static javax.swing.JOptionPane.WARNING_MESSAGE;
-import static javax.swing.JOptionPane.showMessageDialog;
-import static net.sf.taverna.t2.workbench.ui.credentialmanager.CMStrings.WARN_TITLE;
-
-import java.awt.BorderLayout;
-import java.awt.FlowLayout;
-import java.awt.Font;
-import java.awt.GridLayout;
-import java.awt.event.ActionEvent;
-import java.awt.event.ActionListener;
-import java.awt.event.WindowAdapter;
-import java.awt.event.WindowEvent;
-
-import javax.swing.BoxLayout;
-import javax.swing.JButton;
-import javax.swing.JFrame;
-import javax.swing.JLabel;
-import javax.swing.JPanel;
-import javax.swing.JPasswordField;
-import javax.swing.border.CompoundBorder;
-import javax.swing.border.EmptyBorder;
-import javax.swing.border.EtchedBorder;
-
-import net.sf.taverna.t2.workbench.helper.NonBlockedHelpEnabledDialog;
-
-/**
- * Dialog used for user to set a master password for Credential Manager.
- * 
- * @author Alex Nenadic
- */
-@SuppressWarnings("serial")
-public class SetMasterPasswordDialog extends NonBlockedHelpEnabledDialog {
-	/** Password entry field */
-	private JPasswordField passwordField;
-	/** Password confirmation entry field */
-	private JPasswordField passwordConfirmField;
-	/** The entered password */
-	private String password = null;
-	/** Instructions for the user */
-	private String instructions;
-
-	public SetMasterPasswordDialog(JFrame parent, String title, boolean modal,
-			String instructions) {
-		super(parent, title, modal);
-		this.instructions = instructions;
-		initComponents();
-	}
-
-	private void initComponents() {
-		getContentPane().setLayout(new BorderLayout());
-
-		JLabel instructionsLabel = new JLabel(instructions);
-		instructionsLabel.setFont(new Font(null, PLAIN, 11));
-
-		JPanel instructionsPanel = new JPanel();
-		instructionsPanel.setLayout(new BoxLayout(instructionsPanel, Y_AXIS));
-		instructionsPanel.add(instructionsLabel);
-		instructionsPanel.setBorder(new EmptyBorder(10, 5, 10, 0));
-
-		JLabel passwordLabel = new JLabel("Master password");
-		passwordLabel.setBorder(new EmptyBorder(0, 5, 0, 0));
-
-		JLabel passwordConfirmLabel = new JLabel("Confirm master password");
-		passwordConfirmLabel.setBorder(new EmptyBorder(0, 5, 0, 0));
-
-		passwordField = new JPasswordField(15);
-		passwordConfirmField = new JPasswordField(15);
-
-		JPanel passwordPanel = new JPanel(new GridLayout(2, 2, 5, 5));
-		passwordPanel.add(passwordLabel);
-		passwordPanel.add(passwordField);
-		passwordPanel.add(passwordConfirmLabel);
-		passwordPanel.add(passwordConfirmField);
-
-		JPanel mainPanel = new JPanel(new BorderLayout());
-		mainPanel.setBorder(new CompoundBorder(new EmptyBorder(10, 10, 10, 10),
-				new EtchedBorder()));
-		mainPanel.add(instructionsPanel, NORTH);
-		mainPanel.add(passwordPanel, CENTER);
-
-		JButton okButton = new JButton("OK");
-		okButton.addActionListener(new ActionListener() {
-			@Override
-			public void actionPerformed(ActionEvent evt) {
-				okPressed();
-			}
-		});
-
-		JButton cancelButton = new JButton("Cancel");
-		cancelButton.addActionListener(new ActionListener() {
-			@Override
-			public void actionPerformed(ActionEvent evt) {
-				cancelPressed();
-			}
-		});
-		JPanel buttonsPanel = new JPanel(new FlowLayout(FlowLayout.CENTER));
-		buttonsPanel.add(okButton);
-		buttonsPanel.add(cancelButton);
-
-		getContentPane().add(mainPanel, CENTER);
-		getContentPane().add(buttonsPanel, SOUTH);
-
-		addWindowListener(new WindowAdapter() {
-			@Override
-			public void windowClosing(WindowEvent evt) {
-				closeDialog();
-			}
-		});
-
-		setResizable(false);
-		getRootPane().setDefaultButton(okButton);
-		pack();
-	}
-
-	public String getPassword() {
-		return password;
-	}
-
-	/**
-	 * Check that the user has entered a non-empty password and store the new
-	 * password.
-	 */
-	private boolean checkPassword() {
-		String firstPassword = new String(passwordField.getPassword());
-		String confirmPassword = new String(passwordConfirmField.getPassword());
-
-		if (!firstPassword.equals(confirmPassword)) {
-			showMessageDialog(this, "The passwords do not match", WARN_TITLE,
-					WARNING_MESSAGE);
-			return false;
-		}
-		if (firstPassword.isEmpty()) {
-			// passwords match but are empty
-			showMessageDialog(this, "The password cannot be empty", WARN_TITLE,
-					WARNING_MESSAGE);
-			return false;
-		}
-
-		// passwords match and not empty
-		password = firstPassword;
-		return true;
-	}
-
-	private void okPressed() {
-		if (checkPassword())
-			closeDialog();
-	}
-
-	private void cancelPressed() {
-		/*
-		 * Set the password to null as it might have changed in the meantime if
-		 * user entered something then cancelled.
-		 */
-		password = null;
-		closeDialog();
-	}
-
-	private void closeDialog() {
-		setVisible(false);
-		dispose();
-	}
-}

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/a9a52bd5/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/TableCellRenderer.java
----------------------------------------------------------------------
diff --git a/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/TableCellRenderer.java b/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/TableCellRenderer.java
deleted file mode 100644
index 0eaae99..0000000
--- a/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/TableCellRenderer.java
+++ /dev/null
@@ -1,113 +0,0 @@
-/*******************************************************************************
- * Copyright (C) 2007 The University of Manchester   
- * 
- *  Modifications to the initial code base are copyright of their
- *  respective authors, or their employers as appropriate.
- * 
- *  This program is free software; you can redistribute it and/or
- *  modify it under the terms of the GNU Lesser General Public License
- *  as published by the Free Software Foundation; either version 2.1 of
- *  the License, or (at your option) any later version.
- *    
- *  This program is distributed in the hope that it will be useful, but
- *  WITHOUT ANY WARRANTY; without even the implied warranty of
- *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
- *  Lesser General Public License for more details.
- *    
- *  You should have received a copy of the GNU Lesser General Public
- *  License along with this program; if not, write to the Free Software
- *  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
- ******************************************************************************/
-package net.sf.taverna.t2.workbench.ui.credentialmanager;
-
-import static net.sf.taverna.t2.workbench.ui.credentialmanager.CredentialManagerUI.KEY_PAIR_ENTRY_TYPE;
-import static net.sf.taverna.t2.workbench.ui.credentialmanager.CredentialManagerUI.PASSWORD_ENTRY_TYPE;
-import static net.sf.taverna.t2.workbench.ui.credentialmanager.CredentialManagerUI.TRUST_CERT_ENTRY_TYPE;
-
-import java.awt.Component;
-//import java.text.DateFormat;
-//import java.util.Date;
-
-import javax.swing.ImageIcon;
-import javax.swing.JLabel;
-import javax.swing.JTable;
-import javax.swing.border.EmptyBorder;
-import javax.swing.table.DefaultTableCellRenderer;
-//import net.sf.taverna.t2.workbench.ui.credentialmanager.KeyPairsTableModel;
-//import net.sf.taverna.t2.workbench.ui.credentialmanager.PasswordsTableModel;
-//import net.sf.taverna.t2.workbench.ui.credentialmanager.TrustedCertsTableModel;
-
-/**
- * Custom cell renderer for the cells of the tables displaying
- * Keystore/Truststore contents.
- * 
- * @author Alex Nenadic
- */
-public class TableCellRenderer extends DefaultTableCellRenderer {
-	private static final long serialVersionUID = -3983986682794010259L;
-
-	private final ImageIcon passwordEntryIcon = new ImageIcon(
-			TableCellRenderer.class.getResource("/images/table/key_entry.png"));
-	private final ImageIcon keypairEntryIcon = new ImageIcon(
-			TableCellRenderer.class
-					.getResource("/images/table/keypair_entry.png"));
-	private final ImageIcon trustcertEntryIcon = new ImageIcon(
-			TableCellRenderer.class
-					.getResource("/images/table/trustcert_entry.png"));
-
-	/**
-	 * Get the rendered cell for the supplied value and column.
-	 */
-	@Override
-	public Component getTableCellRendererComponent(JTable keyStoreTable,
-			Object value, boolean bIsSelected, boolean bHasFocus, int iRow,
-			int iCol) {
-		JLabel cell = (JLabel) super.getTableCellRendererComponent(
-				keyStoreTable, value, bIsSelected, bHasFocus, iRow, iCol);
-
-		if (value != null) {
-        	// Type column - display an icon representing the type
-			if (iCol == 0)
-				configureTypeColumn(value, cell);
-            // Last Modified column - format date (if date supplied)        
-            /*else if (((keyStoreTable.getModel() instanceof PasswordsTableModel) && (iCol == 3)) || 
-            	((keyStoreTable.getModel() instanceof KeyPairsTableModel) && (iCol == 4))||
-            	((keyStoreTable.getModel() instanceof TrustedCertsTableModel) && (iCol == 4))){
-            	if (value instanceof Date) {
-            		// Include timezone
-            		cell.setText(DateFormat.getDateTimeInstance(DateFormat.MEDIUM,
-            			DateFormat.LONG).format((Date) value));
-            	} else {
-            		cell.setText(value.toString());
-            	}
-            }*/
-            // Other columns - just use their text values
-			else
-				cell.setText(value.toString());
-		}
-
-		cell.setBorder(new EmptyBorder(0, 5, 0, 5));
-		return cell;
-	}
-
-	private void configureTypeColumn(Object value, JLabel cell) {
-		ImageIcon icon = null;
-		// The cell is in the first column of Passwords table
-		if (PASSWORD_ENTRY_TYPE.equals(value)) {
-			icon = passwordEntryIcon; // key (i.e. password) entry image
-		}
-		// The cell is in the first column of Key Pairs table
-		else if (KEY_PAIR_ENTRY_TYPE.equals(value)) {
-			icon = keypairEntryIcon; // key pair entry image
-		}
-		// The cell is in the first column of Trusted Certificates table
-		else if (TRUST_CERT_ENTRY_TYPE.equals(value)) {
-			icon = trustcertEntryIcon; // trust. certificate entry image
-		}
-
-		cell.setIcon(icon);
-		cell.setText("");
-		cell.setVerticalAlignment(CENTER);
-		cell.setHorizontalAlignment(CENTER);
-	}
-}

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/a9a52bd5/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/TableHeaderRenderer.java
----------------------------------------------------------------------
diff --git a/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/TableHeaderRenderer.java b/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/TableHeaderRenderer.java
deleted file mode 100644
index 8070b98..0000000
--- a/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/TableHeaderRenderer.java
+++ /dev/null
@@ -1,100 +0,0 @@
-/*******************************************************************************
- * Copyright (C) 2007 The University of Manchester   
- * 
- *  Modifications to the initial code base are copyright of their
- *  respective authors, or their employers as appropriate.
- * 
- *  This program is free software; you can redistribute it and/or
- *  modify it under the terms of the GNU Lesser General Public License
- *  as published by the Free Software Foundation; either version 2.1 of
- *  the License, or (at your option) any later version.
- *    
- *  This program is distributed in the hope that it will be useful, but
- *  WITHOUT ANY WARRANTY; without even the implied warranty of
- *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
- *  Lesser General Public License for more details.
- *    
- *  You should have received a copy of the GNU Lesser General Public
- *  License along with this program; if not, write to the Free Software
- *  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
- ******************************************************************************/
-package net.sf.taverna.t2.workbench.ui.credentialmanager;
-
-import static javax.swing.border.BevelBorder.RAISED;
-
-import java.awt.Component;
-
-import javax.swing.ImageIcon;
-import javax.swing.JLabel;
-import javax.swing.JTable;
-import javax.swing.border.BevelBorder;
-import javax.swing.border.CompoundBorder;
-import javax.swing.border.EmptyBorder;
-import javax.swing.table.DefaultTableCellRenderer;
-
-import net.sf.taverna.t2.workbench.ui.credentialmanager.KeyPairsTableModel;
-import net.sf.taverna.t2.workbench.ui.credentialmanager.PasswordsTableModel;
-import net.sf.taverna.t2.workbench.ui.credentialmanager.TableHeaderRenderer;
-import net.sf.taverna.t2.workbench.ui.credentialmanager.TrustedCertsTableModel;
-
-/**
- * Custom cell renderer for the headers of the tables displaying 
- * the Keystore/Truststore contents.
- */
-@SuppressWarnings("serial")
-public class TableHeaderRenderer extends DefaultTableCellRenderer {
-	private final ImageIcon entryTypeIcon = new ImageIcon(
-			TableHeaderRenderer.class
-					.getResource("/images/table/entry_heading.png"));
-
-	@Override
-	public Component getTableCellRendererComponent(JTable jtKeyStoreTable,
-			Object value, boolean bIsSelected, boolean bHasFocus, int iRow,
-			int iCol) {
-        // Get header renderer
-        JLabel header = (JLabel) jtKeyStoreTable.getColumnModel().getColumn(iCol).getHeaderRenderer();
-
-        // The entry type header contains an icon for every table
-        if (iCol == 0) {
-            header.setText("");
-            header.setIcon(entryTypeIcon); // entry type icon (header for the first column of the table)
-            header.setHorizontalAlignment(CENTER);
-            header.setVerticalAlignment(CENTER);
-            header.setToolTipText("Entry type");
-        }
-        // All other headers contain text
-        else {
-            header.setText((String) value);
-            header.setHorizontalAlignment(LEFT);
-            
-            // Passwords table
-            if (jtKeyStoreTable.getModel() instanceof PasswordsTableModel){
-                if (iCol == 1) //Service URL column
-					header.setToolTipText("URL of the service username and password will be used for");
-				else if (iCol == 2) // Username column
-					header.setToolTipText("Username for the service");
-			}
-            // Key pairs table
-			else if (jtKeyStoreTable.getModel() instanceof KeyPairsTableModel) {
-				if (iCol == 1) // Owner
-					header.setToolTipText("Certificate's owner");
-				else if (iCol == 2) // Issuer
-					header.setToolTipText("Certificate's issuer");
-				else if (iCol == 3) // Serial number
-					header.setToolTipText("Certificate's serial number");
-            }       
-            // Trusted certs table
-			else if (jtKeyStoreTable.getModel() instanceof TrustedCertsTableModel) {
-				if (iCol == 1) // Owner
-					header.setToolTipText("Certificate's owner");
-				else if (iCol == 2) // Issuer
-					header.setToolTipText("Certificate's issuer");
-				else if (iCol == 3) // Serial number
-					header.setToolTipText("Certificate's serial number");
-            }         
-        }
-		header.setBorder(new CompoundBorder(new BevelBorder(RAISED),
-				new EmptyBorder(0, 5, 0, 5)));
-		return header;
-	}
-}

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/a9a52bd5/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/TrustedCertsTableModel.java
----------------------------------------------------------------------
diff --git a/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/TrustedCertsTableModel.java b/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/TrustedCertsTableModel.java
deleted file mode 100644
index 28faf23..0000000
--- a/taverna-credential-manager-ui/src/main/java/net/sf/taverna/t2/workbench/ui/credentialmanager/TrustedCertsTableModel.java
+++ /dev/null
@@ -1,216 +0,0 @@
-/*******************************************************************************
- * Copyright (C) 2007 The University of Manchester
- *
- *  Modifications to the initial code base are copyright of their
- *  respective authors, or their employers as appropriate.
- *
- *  This program is free software; you can redistribute it and/or
- *  modify it under the terms of the GNU Lesser General Public License
- *  as published by the Free Software Foundation; either version 2.1 of
- *  the License, or (at your option) any later version.
- *
- *  This program is distributed in the hope that it will be useful, but
- *  WITHOUT ANY WARRANTY; without even the implied warranty of
- *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
- *  Lesser General Public License for more details.
- *
- *  You should have received a copy of the GNU Lesser General Public
- *  License along with this program; if not, write to the Free Software
- *  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
- ******************************************************************************/
-package net.sf.taverna.t2.workbench.ui.credentialmanager;
-
-import static javax.swing.JOptionPane.ERROR_MESSAGE;
-import static javax.swing.JOptionPane.showMessageDialog;
-import static org.apache.taverna.security.credentialmanager.CredentialManager.KeystoreType.TRUSTSTORE;
-import static net.sf.taverna.t2.workbench.ui.credentialmanager.CMStrings.ERROR_TITLE;
-import static net.sf.taverna.t2.workbench.ui.credentialmanager.CredentialManagerUI.TRUST_CERT_ENTRY_TYPE;
-
-import java.util.Set;
-import java.util.TreeSet;
-
-import javax.swing.JFrame;
-import javax.swing.table.AbstractTableModel;
-
-import org.apache.taverna.lang.observer.Observable;
-import org.apache.taverna.lang.observer.Observer;
-import org.apache.taverna.security.credentialmanager.CMException;
-import org.apache.taverna.security.credentialmanager.CredentialManager;
-import org.apache.taverna.security.credentialmanager.KeystoreChangedEvent;
-
-import org.apache.log4j.Logger;
-
-/**
- * The table model used to display the Keystore's trusted certificate entries.
- * 
- * @author Alex Nenadic
- */
-@SuppressWarnings("serial")
-public class TrustedCertsTableModel extends AbstractTableModel implements
-		Observer<KeystoreChangedEvent> {
-	private static final Logger logger = Logger
-			.getLogger(TrustedCertsTableModel.class);
-
-	// Column names
-	private String[] columnNames;
-	// Table data
-	private Object[][] data;
-	private CredentialManager credManager;
-
-	public TrustedCertsTableModel(CredentialManager credentialManager) {
-		credManager = credentialManager;
-		if (credentialManager == null) {
-			// Failed to instantiate Credential Manager - warn the user and exit
-			String sMessage = "Failed to instantiate Credential Manager. ";
-			logger.error("CM GUI: "+ sMessage);
-			showMessageDialog(new JFrame(), sMessage, ERROR_TITLE,
-					ERROR_MESSAGE);
-			return;
-        }
-
-       	data = new Object[0][0];
-        columnNames = new String[] {
-        	"Entry Type", // type of the Keystore entry
-        	"Owner", // owner's common name
-        	"Issuer", // issuer's common name
-        	"Serial Number", // public key certificate's serial number
-            "Last Modified", // last modified date of the entry
-            "Alias" // the invisible column holding the actual alias in the Keystore
-        };
-
-        try {
-			load();
-		} catch (CMException cme) {
-			String sMessage = "Failed to load trusted certificates";
-			logger.error(sMessage);
-			showMessageDialog(new JFrame(), sMessage, ERROR_TITLE,
-					ERROR_MESSAGE);
-			return;
-		}
-
-        // Start observing changes to the Keystore
-        credManager.addObserver(this);
-    }
-
-    /**
-     * Load the TrustCertsTableModel with trusted certificate entries from the Keystore.
-     */
-	public void load() throws CMException {
-		/*
-		 * Place trusted certificate entries' aliases in a tree map to sort them
-		 */
-		Set<String> aliases = new TreeSet<>();
-		for (String alias : credManager.getAliases(TRUSTSTORE))
-			/*
-			 * We are only interested in trusted certificate entries here. Alias
-			 * for such entries is constructed as
-			 * "trustedcert#<CERT_SERIAL_NUMBER>#<CERT_COMMON_NAME>"
-			 */
-			if (alias.startsWith("trustedcert#"))
-				aliases.add(alias);
-
-		/*
-		 * Create one table row for each trusted certificate entry Each row has
-		 * 4 fields - type, owner name, last modified data and the invisible
-		 * alias
-		 */
-		data = new Object[aliases.size()][6];
-
-		/*
-		 * Iterate through the sorted aliases, retrieving the trusted
-		 * certificate entries and populating the table model
-		 */
-		int i = 0;
-		for (String alias : aliases) {
-			/*
-			 * Populate the type column - it is set with an integer but a custom
-			 * cell renderer will cause a suitable icon to be displayed
-			 */
-			data[i][0] = TRUST_CERT_ENTRY_TYPE;
-
-			/*
-			 * Split the alias string to extract owner, issuer and serial number
-			 * alias =
-			 * "trustedcert#<CERT_SUBJECT_COMMON_NAME>"#"<CERT_ISSUER_COMMON_NAME>"
-			 * #"<CERT_SERIAL_NUMBER>
-			 */
-			String[] aliasComponents = alias.split("#");
-
-			// Populate the owner column extracted from the alias
-			data[i][1] = aliasComponents[1];
-
-			// Populate the issuer column extracted from the alias
-			data[i][2] = aliasComponents[2];
-
-			// Populate the serial number column extracted from the alias
-			data[i][3] = aliasComponents[3];
-
-			// Populate the modified date column
-			//data[iCnt][4] = credManager.getEntryCreationDate(CredentialManager.TRUSTSTORE, alias);
-
-			// Populate the invisible alias column
-			data[i][5] = alias;
-
-			i++;
-		}
-
-        fireTableDataChanged();
-    }
-
-	/**
-	 * Get the number of columns in the table.
-	 */
-	@Override
-	public int getColumnCount() {
-		return columnNames.length;
-	}
-
-	/**
-	 * Get the number of rows in the table.
-	 */
-	@Override
-	public int getRowCount() {
-		return data.length;
-	}
-
-	/**
-	 * Get the name of the column at the given position.
-	 */
-	@Override
-	public String getColumnName(int iCol) {
-		return columnNames[iCol];
-	}
-
-	/**
-	 * Get the cell value at the given row and column position.
-	 */
-	@Override
-	public Object getValueAt(int iRow, int iCol) {
-		return data[iRow][iCol];
-	}
-
-	/**
-	 * Get the class at of the cells at the given column position.
-	 */
-	@Override
-	public Class<? extends Object> getColumnClass(int iCol) {
-		return getValueAt(0, iCol).getClass();
-	}
-
-	/**
-	 * Is the cell at the given row and column position editable?
-	 */
-	@Override
-	public boolean isCellEditable(int iRow, int iCol) {
-		// The table is always read-only
-		return false;
-	}
-
-	@Override
-	public void notify(Observable<KeystoreChangedEvent> sender,
-			KeystoreChangedEvent message) throws Exception {
-		// reload the table
-		if (message.keystoreType.equals(TRUSTSTORE))
-			load();
-	}
-}