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Posted to notifications@superset.apache.org by GitBox <gi...@apache.org> on 2020/09/26 13:53:47 UTC
[GitHub] [incubator-superset] sazary opened a new issue #11080: Upgrade to 0.37.1 has bug: column dbs.allow_cvas does not exist
sazary opened a new issue #11080:
URL: https://github.com/apache/incubator-superset/issues/11080
Hi
I just upgraded superset from 0.36.0 to 0.37.1 per instructions in docs. Now when I try to open any dashboard or slice, I get a 500 error.
### Expected results
The dashboards to open.
### Actual results
A 500 error, with this stacktrace:
```
Sorry, something went wrong
500 - Internal Server Error
Stacktrace
Traceback (most recent call last):
File "/home/superset/.env/superset/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1278, in _execute_context
cursor, statement, parameters, context
File "/home/superset/.env/superset/lib/python3.6/site-packages/sqlalchemy/engine/default.py", line 593, in do_execute
cursor.execute(statement, parameters)
psycopg2.errors.UndefinedColumn: column dbs.allow_cvas does not exist
LINE 1: ...low_csv_upload, dbs.allow_ctas AS dbs_allow_ctas, dbs.allow_...
^
HINT: Perhaps you meant to reference the column "dbs.allow_ctas".
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "/home/superset/.env/superset/lib/python3.6/site-packages/flask/app.py", line 2447, in wsgi_app
response = self.full_dispatch_request()
File "/home/superset/.env/superset/lib/python3.6/site-packages/flask/app.py", line 1952, in full_dispatch_request
rv = self.handle_user_exception(e)
File "/home/superset/.env/superset/lib/python3.6/site-packages/flask/app.py", line 1821, in handle_user_exception
reraise(exc_type, exc_value, tb)
File "/home/superset/.env/superset/lib/python3.6/site-packages/flask/_compat.py", line 39, in reraise
raise value
File "/home/superset/.env/superset/lib/python3.6/site-packages/flask/app.py", line 1950, in full_dispatch_request
rv = self.dispatch_request()
File "/home/superset/.env/superset/lib/python3.6/site-packages/flask/app.py", line 1936, in dispatch_request
return self.view_functions[rule.endpoint](**req.view_args)
File "/home/superset/.env/superset/lib/python3.6/site-packages/flask_appbuilder/security/decorators.py", line 109, in wraps
return f(self, *args, **kwargs)
File "/home/superset/.env/superset/lib/python3.6/site-packages/superset/views/core.py", line 1616, in dashboard
for datasource, slices in datasources.items()
File "/home/superset/.env/superset/lib/python3.6/site-packages/superset/views/core.py", line 1616, in <dictcomp>
for datasource, slices in datasources.items()
File "/home/superset/.env/superset/lib/python3.6/site-packages/superset/connectors/base/models.py", line 276, in data_for_slices
data = self.data
File "/home/superset/.env/superset/lib/python3.6/site-packages/superset/connectors/sqla/models.py", line 602, in data
data_ = super().data
File "/home/superset/.env/superset/lib/python3.6/site-packages/superset/connectors/base/models.py", line 244, in data
"database": self.database.data, # pylint: disable=no-member
File "/home/superset/.env/superset/lib/python3.6/site-packages/sqlalchemy/orm/attributes.py", line 287, in __get__
return self.impl.get(instance_state(instance), dict_)
File "/home/superset/.env/superset/lib/python3.6/site-packages/sqlalchemy/orm/attributes.py", line 723, in get
value = self.callable_(state, passive)
File "/home/superset/.env/superset/lib/python3.6/site-packages/sqlalchemy/orm/strategies.py", line 760, in _load_for_state
session, state, primary_key_identity, passive
File "<string>", line 1, in <lambda>
File "/home/superset/.env/superset/lib/python3.6/site-packages/sqlalchemy/orm/strategies.py", line 850, in _emit_lazyload
session.query(self.mapper), primary_key_identity
File "/home/superset/.env/superset/lib/python3.6/site-packages/sqlalchemy/ext/baked.py", line 616, in _load_on_pk_identity
result = list(bq.for_session(self.session).params(**params))
File "/home/superset/.env/superset/lib/python3.6/site-packages/sqlalchemy/ext/baked.py", line 445, in __iter__
return q._execute_and_instances(context)
File "/home/superset/.env/superset/lib/python3.6/site-packages/sqlalchemy/orm/query.py", line 3528, in _execute_and_instances
result = conn.execute(querycontext.statement, self._params)
File "/home/superset/.env/superset/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1014, in execute
return meth(self, multiparams, params)
File "/home/superset/.env/superset/lib/python3.6/site-packages/sqlalchemy/sql/elements.py", line 298, in _execute_on_connection
return connection._execute_clauseelement(self, multiparams, params)
File "/home/superset/.env/superset/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1133, in _execute_clauseelement
distilled_params,
File "/home/superset/.env/superset/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1318, in _execute_context
e, statement, parameters, cursor, context
File "/home/superset/.env/superset/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1512, in _handle_dbapi_exception
sqlalchemy_exception, with_traceback=exc_info[2], from_=e
File "/home/superset/.env/superset/lib/python3.6/site-packages/sqlalchemy/util/compat.py", line 178, in raise_
raise exception
File "/home/superset/.env/superset/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1278, in _execute_context
cursor, statement, parameters, context
File "/home/superset/.env/superset/lib/python3.6/site-packages/sqlalchemy/engine/default.py", line 593, in do_execute
cursor.execute(statement, parameters)
sqlalchemy.exc.ProgrammingError: (psycopg2.errors.UndefinedColumn) column dbs.allow_cvas does not exist
LINE 1: ...low_csv_upload, dbs.allow_ctas AS dbs_allow_ctas, dbs.allow_...
^
HINT: Perhaps you meant to reference the column "dbs.allow_ctas".
[SQL: SELECT dbs.created_on AS dbs_created_on, dbs.changed_on AS dbs_changed_on, dbs.id AS dbs_id, dbs.verbose_name AS dbs_verbose_name, dbs.database_name AS dbs_database_name, dbs.sqlalchemy_uri AS dbs_sqlalchemy_uri, dbs.password AS dbs_password, dbs.cache_timeout AS dbs_cache_timeout, dbs.select_as_create_table_as AS dbs_select_as_create_table_as, dbs.expose_in_sqllab AS dbs_expose_in_sqllab, dbs.allow_run_async AS dbs_allow_run_async, dbs.allow_csv_upload AS dbs_allow_csv_upload, dbs.allow_ctas AS dbs_allow_ctas, dbs.allow_cvas AS dbs_allow_cvas, dbs.allow_dml AS dbs_allow_dml, dbs.force_ctas_schema AS dbs_force_ctas_schema, dbs.allow_multi_schema_metadata_fetch AS dbs_allow_multi_schema_metadata_fetch, dbs.extra AS dbs_extra, dbs.encrypted_extra AS dbs_encrypted_extra, dbs.impersonate_user AS dbs_impersonate_user, dbs.server_cert AS dbs_server_cert, dbs.created_by_fk AS dbs_created_by_fk, dbs.changed_by_fk AS dbs_changed_by_fk
FROM dbs
WHERE dbs.id = %(param_1)s]
[parameters: {'param_1': 2}]
(Background on this error at: http://sqlalche.me/e/13/f405)
```
#### How to reproduce the bug
1. Install version 0.36.0
2. Setup some charts and dashboards
3. Upgrade to version 0.37.0 using commands written in docs:
```
pip install apache-superset --upgrade
superset db upgrade
superset init
```
4. Go to any dashboard/slice.
### Environment
(please complete the following information):
- superset version: `Superset 0.37.1`
- python version: `Python 3.6.11`
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[GitHub] [incubator-superset] mistercrunch commented on issue #11080: Upgrade to 0.37.1 has bug: column dbs.allow_cvas does not exist
Posted by GitBox <gi...@apache.org>.
mistercrunch commented on issue #11080:
URL: https://github.com/apache/incubator-superset/issues/11080#issuecomment-715646398
@nh43de , looks like a different error
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[GitHub] [incubator-superset] sazary commented on issue #11080: Upgrade to 0.37.1 has bug: column dbs.allow_cvas does not exist
Posted by GitBox <gi...@apache.org>.
sazary commented on issue #11080:
URL: https://github.com/apache/incubator-superset/issues/11080#issuecomment-699979032
sorry I don't have the output now, but as far as I could see there wasn't any error in it.
I've installed & upgraded it using pip
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[GitHub] [incubator-superset] zhaoyongjie commented on issue #11080: Upgrade to 0.37.1 has bug: column dbs.allow_cvas does not exist
Posted by GitBox <gi...@apache.org>.
zhaoyongjie commented on issue #11080:
URL: https://github.com/apache/incubator-superset/issues/11080#issuecomment-699594284
@sazary Hi, guy, must run database migration script:
```
$ superset db upgrade
```
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[GitHub] [incubator-superset] nh43de edited a comment on issue #11080: Upgrade to 0.37.1 has bug: column dbs.allow_cvas does not exist
Posted by GitBox <gi...@apache.org>.
nh43de edited a comment on issue #11080:
URL: https://github.com/apache/incubator-superset/issues/11080#issuecomment-715478624
I am having the same issue as well, when using 0.37.2 release, docker-compose up --build from source control
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[GitHub] [incubator-superset] nh43de commented on issue #11080: Upgrade to 0.37.1 has bug: column dbs.allow_cvas does not exist
Posted by GitBox <gi...@apache.org>.
nh43de commented on issue #11080:
URL: https://github.com/apache/incubator-superset/issues/11080#issuecomment-715488078
Steps to reproduce:
1. Check out 0.37.2 tag
2. `docker-compose up --build --force-recreate`
3. < < wait for compose >>
4. Shell into superset-app, run `superset db upgrade` and I get this error message.
```
superset@5c7e780d5110:/app$ superset db upgrade
Traceback (most recent call last):
File "/usr/local/lib/python3.7/site-packages/pkg_resources/__init__.py", line 567, in _build_master
ws.require(__requires__)
File "/usr/local/lib/python3.7/site-packages/pkg_resources/__init__.py", line 884, in require
needed = self.resolve(parse_requirements(requirements))
File "/usr/local/lib/python3.7/site-packages/pkg_resources/__init__.py", line 775, in resolve
raise VersionConflict(dist, req).with_context(dependent_req)
pkg_resources.ContextualVersionConflict: (pyarrow 0.17.0 (/usr/local/lib/python3.7/site-packages), Requirement.parse('pyarrow<1.1,>=1.0.1'), {'apache-superset'})
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/local/bin/superset", line 33, in <module>
sys.exit(load_entry_point('apache-superset', 'console_scripts', 'superset')())
File "/usr/local/lib/python3.7/site-packages/click/core.py", line 829, in __call__
return self.main(*args, **kwargs)
File "/usr/local/lib/python3.7/site-packages/flask/cli.py", line 586, in main
return super(FlaskGroup, self).main(*args, **kwargs)
File "/usr/local/lib/python3.7/site-packages/click/core.py", line 782, in main
rv = self.invoke(ctx)
File "/usr/local/lib/python3.7/site-packages/click/core.py", line 1254, in invoke
cmd_name, cmd, args = self.resolve_command(ctx, args)
File "/usr/local/lib/python3.7/site-packages/click/core.py", line 1297, in resolve_command
cmd = self.get_command(ctx, cmd_name)
File "/usr/local/lib/python3.7/site-packages/flask/cli.py", line 527, in get_command
self._load_plugin_commands()
File "/usr/local/lib/python3.7/site-packages/flask/cli.py", line 517, in _load_plugin_commands
import pkg_resources
File "/usr/local/lib/python3.7/site-packages/pkg_resources/__init__.py", line 3238, in <module>
@_call_aside
File "/usr/local/lib/python3.7/site-packages/pkg_resources/__init__.py", line 3222, in _call_aside
f(*args, **kwargs)
File "/usr/local/lib/python3.7/site-packages/pkg_resources/__init__.py", line 3251, in _initialize_master_working_set
working_set = WorkingSet._build_master()
File "/usr/local/lib/python3.7/site-packages/pkg_resources/__init__.py", line 569, in _build_master
return cls._build_from_requirements(__requires__)
File "/usr/local/lib/python3.7/site-packages/pkg_resources/__init__.py", line 582, in _build_from_requirements
dists = ws.resolve(reqs, Environment())
File "/usr/local/lib/python3.7/site-packages/pkg_resources/__init__.py", line 770, in resolve
raise DistributionNotFound(req, requirers)
pkg_resources.DistributionNotFound: The 'pyarrow<1.1,>=1.0.1' distribution was not found and is required by apache-superset
superset@5c7e780d5110:/app$
```
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[GitHub] [incubator-superset] sazary commented on issue #11080: Upgrade to 0.37.1 has bug: column dbs.allow_cvas does not exist
Posted by GitBox <gi...@apache.org>.
sazary commented on issue #11080:
URL: https://github.com/apache/incubator-superset/issues/11080#issuecomment-744276692
@keehl1213 no i just gave up
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[GitHub] [incubator-superset] sazary commented on issue #11080: Upgrade to 0.37.1 has bug: column dbs.allow_cvas does not exist
Posted by GitBox <gi...@apache.org>.
sazary commented on issue #11080:
URL: https://github.com/apache/incubator-superset/issues/11080#issuecomment-699599584
Hi
I did it, as I've mentioned in steps to reproduce
________________________________
From: Yongjie Zhao <no...@github.com>
Sent: Sunday, September 27, 2020 10:18:19 AM
To: apache/incubator-superset <in...@noreply.github.com>
Cc: Soroosh Azary Marhabi <so...@azary.ir>; Mention <me...@noreply.github.com>
Subject: Re: [apache/incubator-superset] Upgrade to 0.37.1 has bug: column dbs.allow_cvas does not exist (#11080)
@sazary<https://github.com/sazary> Hi, guy, must run database migration script:
$ superset db upgrade
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[GitHub] [incubator-superset] keehl1213 commented on issue #11080: Upgrade to 0.37.1 has bug: column dbs.allow_cvas does not exist
Posted by GitBox <gi...@apache.org>.
keehl1213 commented on issue #11080:
URL: https://github.com/apache/incubator-superset/issues/11080#issuecomment-744268384
> Steps to reproduce:
>
> 1. Check out 0.37.2 tag
> 2. `docker-compose up --build --force-recreate`
> 3. < < wait for compose >>
> 4. Shell into superset-app, run `superset db upgrade` and I get this error message.
>
> (note: this problem does not happen in main/master branch, everything behaves normally)
>
> ```
> superset@5c7e780d5110:/app$ superset db upgrade
> Traceback (most recent call last):
> File "/usr/local/lib/python3.7/site-packages/pkg_resources/__init__.py", line 567, in _build_master
> ws.require(__requires__)
> File "/usr/local/lib/python3.7/site-packages/pkg_resources/__init__.py", line 884, in require
> needed = self.resolve(parse_requirements(requirements))
> File "/usr/local/lib/python3.7/site-packages/pkg_resources/__init__.py", line 775, in resolve
> raise VersionConflict(dist, req).with_context(dependent_req)
> pkg_resources.ContextualVersionConflict: (pyarrow 0.17.0 (/usr/local/lib/python3.7/site-packages), Requirement.parse('pyarrow<1.1,>=1.0.1'), {'apache-superset'})
>
> During handling of the above exception, another exception occurred:
>
> Traceback (most recent call last):
> File "/usr/local/bin/superset", line 33, in <module>
> sys.exit(load_entry_point('apache-superset', 'console_scripts', 'superset')())
> File "/usr/local/lib/python3.7/site-packages/click/core.py", line 829, in __call__
> return self.main(*args, **kwargs)
> File "/usr/local/lib/python3.7/site-packages/flask/cli.py", line 586, in main
> return super(FlaskGroup, self).main(*args, **kwargs)
> File "/usr/local/lib/python3.7/site-packages/click/core.py", line 782, in main
> rv = self.invoke(ctx)
> File "/usr/local/lib/python3.7/site-packages/click/core.py", line 1254, in invoke
> cmd_name, cmd, args = self.resolve_command(ctx, args)
> File "/usr/local/lib/python3.7/site-packages/click/core.py", line 1297, in resolve_command
> cmd = self.get_command(ctx, cmd_name)
> File "/usr/local/lib/python3.7/site-packages/flask/cli.py", line 527, in get_command
> self._load_plugin_commands()
> File "/usr/local/lib/python3.7/site-packages/flask/cli.py", line 517, in _load_plugin_commands
> import pkg_resources
> File "/usr/local/lib/python3.7/site-packages/pkg_resources/__init__.py", line 3238, in <module>
> @_call_aside
> File "/usr/local/lib/python3.7/site-packages/pkg_resources/__init__.py", line 3222, in _call_aside
> f(*args, **kwargs)
> File "/usr/local/lib/python3.7/site-packages/pkg_resources/__init__.py", line 3251, in _initialize_master_working_set
> working_set = WorkingSet._build_master()
> File "/usr/local/lib/python3.7/site-packages/pkg_resources/__init__.py", line 569, in _build_master
> return cls._build_from_requirements(__requires__)
> File "/usr/local/lib/python3.7/site-packages/pkg_resources/__init__.py", line 582, in _build_from_requirements
> dists = ws.resolve(reqs, Environment())
> File "/usr/local/lib/python3.7/site-packages/pkg_resources/__init__.py", line 770, in resolve
> raise DistributionNotFound(req, requirers)
> pkg_resources.DistributionNotFound: The 'pyarrow<1.1,>=1.0.1' distribution was not found and is required by apache-superset
> superset@5c7e780d5110:/app$
> ```
I'm too. Have you solved the problem?
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[GitHub] [incubator-superset] nh43de edited a comment on issue #11080: Upgrade to 0.37.1 has bug: column dbs.allow_cvas does not exist
Posted by GitBox <gi...@apache.org>.
nh43de edited a comment on issue #11080:
URL: https://github.com/apache/incubator-superset/issues/11080#issuecomment-715488078
Steps to reproduce:
1. Check out 0.37.2 tag
2. `docker-compose up --build --force-recreate`
3. < < wait for compose >>
4. Shell into superset-app, run `superset db upgrade` and I get this error message.
(note: this problem does not happen in main/master branch, everything behaves normally)
```
superset@5c7e780d5110:/app$ superset db upgrade
Traceback (most recent call last):
File "/usr/local/lib/python3.7/site-packages/pkg_resources/__init__.py", line 567, in _build_master
ws.require(__requires__)
File "/usr/local/lib/python3.7/site-packages/pkg_resources/__init__.py", line 884, in require
needed = self.resolve(parse_requirements(requirements))
File "/usr/local/lib/python3.7/site-packages/pkg_resources/__init__.py", line 775, in resolve
raise VersionConflict(dist, req).with_context(dependent_req)
pkg_resources.ContextualVersionConflict: (pyarrow 0.17.0 (/usr/local/lib/python3.7/site-packages), Requirement.parse('pyarrow<1.1,>=1.0.1'), {'apache-superset'})
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/local/bin/superset", line 33, in <module>
sys.exit(load_entry_point('apache-superset', 'console_scripts', 'superset')())
File "/usr/local/lib/python3.7/site-packages/click/core.py", line 829, in __call__
return self.main(*args, **kwargs)
File "/usr/local/lib/python3.7/site-packages/flask/cli.py", line 586, in main
return super(FlaskGroup, self).main(*args, **kwargs)
File "/usr/local/lib/python3.7/site-packages/click/core.py", line 782, in main
rv = self.invoke(ctx)
File "/usr/local/lib/python3.7/site-packages/click/core.py", line 1254, in invoke
cmd_name, cmd, args = self.resolve_command(ctx, args)
File "/usr/local/lib/python3.7/site-packages/click/core.py", line 1297, in resolve_command
cmd = self.get_command(ctx, cmd_name)
File "/usr/local/lib/python3.7/site-packages/flask/cli.py", line 527, in get_command
self._load_plugin_commands()
File "/usr/local/lib/python3.7/site-packages/flask/cli.py", line 517, in _load_plugin_commands
import pkg_resources
File "/usr/local/lib/python3.7/site-packages/pkg_resources/__init__.py", line 3238, in <module>
@_call_aside
File "/usr/local/lib/python3.7/site-packages/pkg_resources/__init__.py", line 3222, in _call_aside
f(*args, **kwargs)
File "/usr/local/lib/python3.7/site-packages/pkg_resources/__init__.py", line 3251, in _initialize_master_working_set
working_set = WorkingSet._build_master()
File "/usr/local/lib/python3.7/site-packages/pkg_resources/__init__.py", line 569, in _build_master
return cls._build_from_requirements(__requires__)
File "/usr/local/lib/python3.7/site-packages/pkg_resources/__init__.py", line 582, in _build_from_requirements
dists = ws.resolve(reqs, Environment())
File "/usr/local/lib/python3.7/site-packages/pkg_resources/__init__.py", line 770, in resolve
raise DistributionNotFound(req, requirers)
pkg_resources.DistributionNotFound: The 'pyarrow<1.1,>=1.0.1' distribution was not found and is required by apache-superset
superset@5c7e780d5110:/app$
```
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[GitHub] [incubator-superset] issue-label-bot[bot] commented on issue #11080: Upgrade to 0.37.1 has bug: column dbs.allow_cvas does not exist
Posted by GitBox <gi...@apache.org>.
issue-label-bot[bot] commented on issue #11080:
URL: https://github.com/apache/incubator-superset/issues/11080#issuecomment-699498449
Issue-Label Bot is automatically applying the label `#bug` to this issue, with a confidence of 0.97. Please mark this comment with :thumbsup: or :thumbsdown: to give our bot feedback!
Links: [app homepage](https://github.com/marketplace/issue-label-bot), [dashboard](https://mlbot.net/data/apache/incubator-superset) and [code](https://github.com/hamelsmu/MLapp) for this bot.
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[GitHub] [incubator-superset] dpgaspar commented on issue #11080: Upgrade to 0.37.1 has bug: column dbs.allow_cvas does not exist
Posted by GitBox <gi...@apache.org>.
dpgaspar commented on issue #11080:
URL: https://github.com/apache/incubator-superset/issues/11080#issuecomment-699908229
Can you post the output from `superset db upgrade` ? Also are you using `docker-compose` or some other install method?
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[GitHub] [incubator-superset] nh43de commented on issue #11080: Upgrade to 0.37.1 has bug: column dbs.allow_cvas does not exist
Posted by GitBox <gi...@apache.org>.
nh43de commented on issue #11080:
URL: https://github.com/apache/incubator-superset/issues/11080#issuecomment-715478624
I am having the same issue as well, when using 0.37.2 release, docker-compose up --build
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