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Posted to dev@airavata.apache.org by "Raminderjeet Singh (JIRA)" <ji...@apache.org> on 2014/08/19 21:01:18 UTC
[jira] [Commented] (AIRAVATA-1399) Error submitting the job to host
login1.ls4.tacc.utexas. edu message: 2
[ https://issues.apache.org/jira/browse/AIRAVATA-1399?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=14102657#comment-14102657 ]
Raminderjeet Singh commented on AIRAVATA-1399:
----------------------------------------------
Another situation to deal with in GSISSH. The issue was job id was not returned by lonestar few times and stderr of the command was empty. Job went to queue actually. I tried to replicate the issue using ssh command line but not successful yet.
> Error submitting the job to host login1.ls4.tacc.utexas. edu message: 2
> -----------------------------------------------------------------------
>
> Key: AIRAVATA-1399
> URL: https://issues.apache.org/jira/browse/AIRAVATA-1399
> Project: Airavata
> Issue Type: Bug
> Components: GFac
> Affects Versions: 0.14
> Reporter: Raminderjeet Singh
>
> Following error is thrown
> java.lang.ArrayIndexOutOfBoundsException: 2
> at org.apache.airavata.gsi.ssh.api.job.SGEOutputParser.parse(SGEOutputParser.java:124)
> at org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster.submitBatchJobWithScript(GSISSHAbstractCluster.java:255)
> at org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster.submitBatchJob(GSISSHAbstractCluster.java:292)
> at org.apache.airavata.gfac.gsissh.provider.impl.GSISSHProvider.execute(GSISSHProvider.java:103)
> at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.executeProvider(BetterGfacImpl.java:861)
> at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.invokeProviderExecute(BetterGfacImpl.java:768)
> at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.launch(BetterGfacImpl.java:724)
> at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:515)
> at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:237)
> at org.apache.airavata.gfac.server.GfacServerHandler.submitJob(GfacServerHandler.java:199)
> at org.apache.airavata.gfac.cpi.GfacService$Processor$submitJob.getResult(GfacService.java:374)
> at org.apache.airavata.gfac.cpi.GfacService$Processor$submitJob.getResult(GfacService.java:359)
> at org.apache.thrift.ProcessFunction.process(ProcessFunction.java:39)
> at org.apache.thrift.TBaseProcessor.process(TBaseProcessor.java:39)
> at org.apache.thrift.server.TThreadPoolServer$WorkerProcess.run(TThreadPoolServer.java:225)
> at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:895)
> at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:918)
> at java.lang.Thread.run(Thread.java:662)
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