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Posted to dev@singa.apache.org by GitBox <gi...@apache.org> on 2020/03/06 14:54:20 UTC
[GitHub] [singa] chrishkchris opened a new issue #623: Some consultations
using the conda build in singa/tool/conda/singa
chrishkchris opened a new issue #623: Some consultations using the conda build in singa/tool/conda/singa
URL: https://github.com/apache/singa/issues/623
@dcslin Shicong, did you encountered such error using conda build before? I would like your help because seems you are recently on CI/CD
I am trying to use the dev branch to build conda using singa/tool/conda/singa, it gives the errors concerning onnx version
conda_build.exceptions.DependencyNeedsBuildingError: Unsatisfiable dependencies for platform linux-64: {"onnx[version='>=1.3.0']"}
```
dcsysh@panda:~/singa/tool/conda/singa$ export CUDA=10.0
dcsysh@panda:~/singa/tool/conda/singa$ conda-build . --python 3.6
No numpy version specified in conda_build_config.yaml. Falling back to default numpy value of 1.11
WARNING:conda_build.metadata:No numpy version specified in conda_build_config.yaml. Falling back to default numpy value of 1.11
Copying /home/dcsysh/singa to /home/dcsysh/anaconda3/conda-bld/singa_1583505296868/work/
Adding in variants from internal_defaults
INFO:conda_build.variants:Adding in variants from internal_defaults
Adding in variants from /home/dcsysh/singa/tool/conda/singa/conda_build_config.yaml
INFO:conda_build.variants:Adding in variants from /home/dcsysh/singa/tool/conda/singa/conda_build_config.yaml
Adding in variants from config.variant
INFO:conda_build.variants:Adding in variants from config.variant
/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda_build/environ.py:427: UserWarning: The environment variable 'CUDA' is being passed through with value '10.0'. If you are splitting build and test phases with --no-test, please ensure that this value is also set similarly at test time.
UserWarning
Attempting to finalize metadata for singa
INFO:conda_build.metadata:Attempting to finalize metadata for singa
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
Adding .* to spec 'libprotobuf 3.6.1' to ensure satisfiability. Please consider putting {{ var_name }}.* or some relational operator (>/</>=/<=) on this spec in meta.yaml, or if req is also a build req, using {{ pin_compatible() }} jinja2 function instead. See https://conda.io/docs/user-guide/tasks/build-packages/variants.html#pinning-at-the-variant-level
WARNING:conda_build.utils:Adding .* to spec 'libprotobuf 3.6.1' to ensure satisfiability. Please consider putting {{ var_name }}.* or some relational operator (>/</>=/<=) on this spec in meta.yaml, or if req is also a build req, using {{ pin_compatible() }} jinja2 function instead. See https://conda.io/docs/user-guide/tasks/build-packages/variants.html#pinning-at-the-variant-level
WARNING conda_build.utils:ensure_valid_spec(1749): Adding .* to spec 'libprotobuf 3.6.1' to ensure satisfiability. Please consider putting {{ var_name }}.* or some relational operator (>/</>=/<=) on this spec in meta.yaml, or if req is also a build req, using {{ pin_compatible() }} jinja2 function instead. See https://conda.io/docs/user-guide/tasks/build-packages/variants.html#pinning-at-the-variant-level
Adding .* to spec 'libopenblas 0.3.3' to ensure satisfiability. Please consider putting {{ var_name }}.* or some relational operator (>/</>=/<=) on this spec in meta.yaml, or if req is also a build req, using {{ pin_compatible() }} jinja2 function instead. See https://conda.io/docs/user-guide/tasks/build-packages/variants.html#pinning-at-the-variant-level
WARNING:conda_build.utils:Adding .* to spec 'libopenblas 0.3.3' to ensure satisfiability. Please consider putting {{ var_name }}.* or some relational operator (>/</>=/<=) on this spec in meta.yaml, or if req is also a build req, using {{ pin_compatible() }} jinja2 function instead. See https://conda.io/docs/user-guide/tasks/build-packages/variants.html#pinning-at-the-variant-level
WARNING conda_build.utils:ensure_valid_spec(1749): Adding .* to spec 'libopenblas 0.3.3' to ensure satisfiability. Please consider putting {{ var_name }}.* or some relational operator (>/</>=/<=) on this spec in meta.yaml, or if req is also a build req, using {{ pin_compatible() }} jinja2 function instead. See https://conda.io/docs/user-guide/tasks/build-packages/variants.html#pinning-at-the-variant-level
BUILD START: ['singa-2.1.0.dev-cudnn7.3.1_cuda10.0_py36.tar.bz2']
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
## Package Plan ##
environment location: /home/dcsysh/anaconda3/conda-bld/singa_1583505296868/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_place
The following NEW packages will be INSTALLED:
_libgcc_mutex: 0.1-main
blas: 1.0-openblas
ca-certificates: 2020.1.1-0
certifi: 2019.11.28-py36_0
cudatoolkit: 10.0.130-0
cudnn: 7.3.1-cuda10.0_0
gflags: 2.2.2-he6710b0_0
glog: 0.3.5-hf484d3e_1
intel-openmp: 2018.0.3-0
ld_impl_linux-64: 2.33.1-h53a641e_7
libedit: 3.1.20181209-hc058e9b_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 9.1.0-hdf63c60_0
libgfortran-ng: 7.3.0-hdf63c60_0
libmklml: 2018.0.3-0
libopenblas: 0.3.3-h5a2b251_3
libprotobuf: 3.6.1-hd408876_0
libstdcxx-ng: 9.1.0-hdf63c60_0
mkl-dnn: 0.14-h6bb024c_0
ncurses: 6.2-he6710b0_0
nomkl: 3.0-0
numpy: 1.16.0-py36h99e49ec_1
numpy-base: 1.16.0-py36h2f8d375_1
openblas: 0.3.3-3
openblas-devel: 0.3.3-3
openssl: 1.1.1d-h7b6447c_4
pcre: 8.43-he6710b0_0
pip: 20.0.2-py36_1
protobuf: 3.6.1-py36he6710b0_0
python: 3.6.10-h0371630_0
readline: 7.0-h7b6447c_5
setuptools: 45.2.0-py36_0
six: 1.14.0-py36_0
sqlite: 3.31.1-h7b6447c_0
swig: 3.0.12-h38cdd7d_3
tk: 8.6.8-hbc83047_0
wheel: 0.34.2-py36_0
xz: 5.2.4-h14c3975_4
zlib: 1.2.11-h7b6447c_3
Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... failed
Leaving build/test directories:
Work:
/home/dcsysh/anaconda3/conda-bld/work
Test:
/home/dcsysh/anaconda3/conda-bld/test_tmp
Leaving build/test environments:
Test:
source activate /home/dcsysh/anaconda3/conda-bld/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_
Build:
source activate /home/dcsysh/anaconda3/conda-bld/_build_env
Traceback (most recent call last):
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda_build/environ.py", line 757, in get_install_actions
actions = install_actions(prefix, index, specs, force=True)
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda/common/io.py", line 88, in decorated
return f(*args, **kwds)
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda/plan.py", line 474, in install_actions
txn = solver.solve_for_transaction(prune=prune, ignore_pinned=not pinned)
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda/core/solve.py", line 117, in solve_for_transaction
should_retry_solve)
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda/core/solve.py", line 158, in solve_for_diff
force_remove, should_retry_solve)
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda/core/solve.py", line 275, in solve_final_state
ssc = self._add_specs(ssc)
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda/core/solve.py", line 555, in _add_specs
explicit_pool = ssc.r._get_package_pool(self.specs_to_add)
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda/resolve.py", line 553, in _get_package_pool
pool = self.get_reduced_index(specs)
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda/common/io.py", line 88, in decorated
return f(*args, **kwds)
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda/resolve.py", line 574, in get_reduced_index
explicit_specs, features = self.verify_specs(explicit_specs)
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda/resolve.py", line 288, in verify_specs
raise ResolvePackageNotFound(bad_deps)
conda.exceptions.ResolvePackageNotFound:
- onnx[version='>=1.3.0']
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/home/dcsysh/anaconda3/bin/conda-build", line 11, in <module>
sys.exit(main())
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda_build/cli/main_build.py", line 469, in main
execute(sys.argv[1:])
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda_build/cli/main_build.py", line 460, in execute
verify=args.verify, variants=args.variants)
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda_build/api.py", line 209, in build
notest=notest, need_source_download=need_source_download, variants=variants)
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda_build/build.py", line 2344, in build_tree
notest=notest,
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda_build/build.py", line 1408, in build
create_build_envs(top_level_pkg, notest)
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda_build/build.py", line 1292, in create_build_envs
raise e
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda_build/build.py", line 1282, in create_build_envs
channel_urls=tuple(m.config.channel_urls))
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda_build/environ.py", line 759, in get_install_actions
raise DependencyNeedsBuildingError(exc, subdir=subdir)
conda_build.exceptions.DependencyNeedsBuildingError: Unsatisfiable dependencies for platform linux-64: {"onnx[version='>=1.3.0']"}
```
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[GitHub] [singa] chrishkchris commented on issue #623: Some consultations
using the conda build in singa/tool/conda/singa
Posted by GitBox <gi...@apache.org>.
chrishkchris commented on issue #623: Some consultations using the conda build in singa/tool/conda/singa
URL: https://github.com/apache/singa/issues/623#issuecomment-596298562
Sorry, I tried my anaconda environment is not okay, and then tried the docker environment in https://github.com/apache/singa/blob/master/tool/conda/docker/cuda10/Dockerfile is still not ok
The error message is:
```
root@3c17fd6cb72e:~/dcsysh/singa/tool/conda/singa# export CUDA=10.0
root@3c17fd6cb72e:~/dcsysh/singa/tool/conda/singa# conda-build -c conda-forge . --python 3.6
No numpy version specified in conda_build_config.yaml. Falling back to default numpy value of 1.11
WARNING:conda_build.metadata:No numpy version specified in conda_build_config.yaml. Falling back to default numpy value of 1.11
Copying /root/dcsysh/singa to /root/miniconda/conda-bld/singa_1583682553831/work/
Adding in variants from internal_defaults
INFO:conda_build.variants:Adding in variants from internal_defaults
Adding in variants from /root/dcsysh/singa/tool/conda/singa/conda_build_config.yaml
INFO:conda_build.variants:Adding in variants from /root/dcsysh/singa/tool/conda/singa/conda_build_config.yaml
Adding in variants from config.variant
INFO:conda_build.variants:Adding in variants from config.variant
/root/miniconda/lib/python3.7/site-packages/conda_build/environ.py:427: UserWarning: The environment variable 'CUDA' is being passed through with value '10.0'. If you are splitting build and test phases with --no-test, please ensure that this value is also set similarly at test time.
UserWarning
Attempting to finalize metadata for singa
INFO:conda_build.metadata:Attempting to finalize metadata for singa
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
Adding .* to spec 'libopenblas 0.3.3' to ensure satisfiability. Please consider putting {{ var_name }}.* or some relational operator (>/</>=/<=) on this spec in meta.yaml, or if req is also a build req, using {{ pin_compatible() }} jinja2 function instead. See https://conda.io/docs/user-guide/tasks/build-packages/variants.html#pinning-at-the-variant-level
WARNING:conda_build.utils:Adding .* to spec 'libopenblas 0.3.3' to ensure satisfiability. Please consider putting {{ var_name }}.* or some relational operator (>/</>=/<=) on this spec in meta.yaml, or if req is also a build req, using {{ pin_compatible() }} jinja2 function instead. See https://conda.io/docs/user-guide/tasks/build-packages/variants.html#pinning-at-the-variant-level
WARNING conda_build.utils:ensure_valid_spec(1749): Adding .* to spec 'libopenblas 0.3.3' to ensure satisfiability. Please consider putting {{ var_name }}.* or some relational operator (>/</>=/<=) on this spec in meta.yaml, or if req is also a build req, using {{ pin_compatible() }} jinja2 function instead. See https://conda.io/docs/user-guide/tasks/build-packages/variants.html#pinning-at-the-variant-level
Adding .* to spec 'libprotobuf 3.6.1' to ensure satisfiability. Please consider putting {{ var_name }}.* or some relational operator (>/</>=/<=) on this spec in meta.yaml, or if req is also a build req, using {{ pin_compatible() }} jinja2 function instead. See https://conda.io/docs/user-guide/tasks/build-packages/variants.html#pinning-at-the-variant-level
WARNING:conda_build.utils:Adding .* to spec 'libprotobuf 3.6.1' to ensure satisfiability. Please consider putting {{ var_name }}.* or some relational operator (>/</>=/<=) on this spec in meta.yaml, or if req is also a build req, using {{ pin_compatible() }} jinja2 function instead. See https://conda.io/docs/user-guide/tasks/build-packages/variants.html#pinning-at-the-variant-level
WARNING conda_build.utils:ensure_valid_spec(1749): Adding .* to spec 'libprotobuf 3.6.1' to ensure satisfiability. Please consider putting {{ var_name }}.* or some relational operator (>/</>=/<=) on this spec in meta.yaml, or if req is also a build req, using {{ pin_compatible() }} jinja2 function instead. See https://conda.io/docs/user-guide/tasks/build-packages/variants.html#pinning-at-the-variant-level
BUILD START: ['singa-2.1.0.dev-cudnn7.3.1_cuda10.0_py36.tar.bz2']
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
## Package Plan ##
environment location: /root/miniconda/conda-bld/singa_1583682553831/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl
The following NEW packages will be INSTALLED:
_libgcc_mutex: 0.1-conda_forge conda-forge
_openmp_mutex: 4.5-0_gnu conda-forge
blas: 1.1-openblas conda-forge
ca-certificates: 2019.11.28-hecc5488_0 conda-forge
certifi: 2019.11.28-py36_0 conda-forge
cudatoolkit: 10.0.130-0
cudnn: 7.3.1-cuda10.0_0
glog: 0.3.5-hf484d3e_1001 conda-forge
intel-openmp: 2018.0.3-0
ld_impl_linux-64: 2.33.1-h53a641e_8 conda-forge
libffi: 3.2.1-he1b5a44_1006 conda-forge
libgcc-ng: 9.2.0-h24d8f2e_2 conda-forge
libgfortran-ng: 7.3.0-hdf63c60_5 conda-forge
libgomp: 9.2.0-h24d8f2e_2 conda-forge
libmklml: 2018.0.3-0
libprotobuf: 3.6.1-hdbcaa40_1001 conda-forge
libstdcxx-ng: 9.2.0-hdf63c60_2 conda-forge
mkl-dnn: 0.14-h6bb024c_0
ncurses: 6.1-hf484d3e_1002 conda-forge
numpy: 1.16.0-py36_blas_openblash1522bff_1000 conda-forge [blas_openblas]
openblas: 0.3.3-h9ac9557_1001 conda-forge
openssl: 1.1.1d-h516909a_0 conda-forge
pcre: 8.44-he1b5a44_0 conda-forge
pip: 20.0.2-py_2 conda-forge
protobuf: 3.6.1-py36hf484d3e_1001 conda-forge
python: 3.6.10-h9d8adfe_1009_cpython conda-forge
python_abi: 3.6-1_cp36m conda-forge
readline: 8.0-hf8c457e_0 conda-forge
setuptools: 45.3.0-py36_0 conda-forge
six: 1.14.0-py36_0 conda-forge
sqlite: 3.30.1-hcee41ef_0 conda-forge
swig: 3.0.12-hf484d3e_1003 conda-forge
tk: 8.6.10-hed695b0_0 conda-forge
wheel: 0.34.2-py_1 conda-forge
xz: 5.2.4-h14c3975_1001 conda-forge
zlib: 1.2.11-h516909a_1006 conda-forge
Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
## Package Plan ##
environment location: /root/miniconda/conda-bld/singa_1583682553831/_build_env
The following NEW packages will be INSTALLED:
_libgcc_mutex: 0.1-conda_forge conda-forge
_openmp_mutex: 4.5-0_gnu conda-forge
binutils_impl_linux-64: 2.28.1-had2808c_3
binutils_linux-64: 5.4.0-had2808c_24
bzip2: 1.0.8-h516909a_2 conda-forge
ca-certificates: 2019.11.28-hecc5488_0 conda-forge
cmake: 3.16.4-h28c56e5_0 conda-forge
expat: 2.2.9-he1b5a44_2 conda-forge
gcc_impl_linux-64: 5.4.0-habb00fd_3
gcc_linux-64: 5.4.0-h98af8de_24
gxx_impl_linux-64: 5.4.0-hdf63c60_3
gxx_linux-64: 5.4.0-h98af8de_24
krb5: 1.16.4-h2fd8d38_0 conda-forge
libcurl: 7.68.0-hda55be3_0 conda-forge
libedit: 3.1.20170329-hf8c457e_1001 conda-forge
libgcc-ng: 9.2.0-h24d8f2e_2 conda-forge
libgomp: 9.2.0-h24d8f2e_2 conda-forge
libssh2: 1.8.2-h22169c7_2 conda-forge
libstdcxx-ng: 9.2.0-hdf63c60_2 conda-forge
libuv: 1.34.0-h516909a_0 conda-forge
make: 4.3-h516909a_0 conda-forge
ncurses: 6.1-hf484d3e_1002 conda-forge
openssl: 1.1.1d-h516909a_0 conda-forge
rhash: 1.3.6-h14c3975_1001 conda-forge
tk: 8.6.10-hed695b0_0 conda-forge
xz: 5.2.4-h14c3975_1001 conda-forge
zlib: 1.2.11-h516909a_1006 conda-forge
Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
source tree in: /root/miniconda/conda-bld/singa_1583682553831/work
export PREFIX=/root/miniconda/conda-bld/singa_1583682553831/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl
export BUILD_PREFIX=/root/miniconda/conda-bld/singa_1583682553831/_build_env
export SRC_DIR=/root/miniconda/conda-bld/singa_1583682553831/work
INFO: activate-binutils_linux-64.sh made the following environmental changes:
+ADDR2LINE=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-addr2line
+AR=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-ar
+AS=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-as
+CXXFILT=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-c++filt
+ELFEDIT=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-elfedit
+GPROF=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-gprof
+HOST=x86_64-conda_cos6-linux-gnu
+LD=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-ld
+LD_GOLD=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-ld.gold
+NM=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-nm
+OBJCOPY=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-objcopy
+OBJDUMP=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-objdump
+RANLIB=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-ranlib
+READELF=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-readelf
+SIZE=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-size
+STRINGS=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-strings
+STRIP=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-strip
INFO: activate-gcc_linux-64.sh made the following environmental changes:
+CC=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-cc
+CFLAGS=-march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -O2 -pipe -I$PREFIX/include -fdebug-prefix-map=${SRC_DIR}=/usr/local/src/conda/${PKG_NAME}-${PKG_VERSION} -fdebug-prefix-map=${PREFIX}=/usr/local/src/conda-prefix
+CPP=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-cpp
+CPPFLAGS=-DNDEBUG -D_FORTIFY_SOURCE=2 -O2
+DEBUG_CFLAGS=-march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-all -Og -g -Wall -Wextra -fvar-tracking-assignments -pipe -I$PREFIX/include -fdebug-prefix-map=${SRC_DIR}=/usr/local/src/conda/${PKG_NAME}-${PKG_VERSION} -fdebug-prefix-map=${PREFIX}=/usr/local/src/conda-prefix
+DEBUG_CPPFLAGS=-D_DEBUG -D_FORTIFY_SOURCE=2 -Og
+GCC=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-gcc
+GCC_AR=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-gcc-ar
+GCC_NM=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-gcc-nm
+GCC_RANLIB=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-gcc-ranlib
+LDFLAGS=-Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-rpath,$PREFIX/lib -L$PREFIX/lib
+_PYTHON_SYSCONFIGDATA_NAME=_sysconfigdata_x86_64_conda_cos6_linux_gnu
INFO: activate-gxx_linux-64.sh made the following environmental changes:
+CXX=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-c++
+CXXFLAGS=-fvisibility-inlines-hidden -std=c++11 -fmessage-length=0 -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -O2 -pipe -I$PREFIX/include -fdebug-prefix-map=${SRC_DIR}=/usr/local/src/conda/${PKG_NAME}-${PKG_VERSION} -fdebug-prefix-map=${PREFIX}=/usr/local/src/conda-prefix
+DEBUG_CXXFLAGS=-fvisibility-inlines-hidden -std=c++11 -fmessage-length=0 -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-all -Og -g -Wall -Wextra -fvar-tracking-assignments -pipe -I$PREFIX/include -fdebug-prefix-map=${SRC_DIR}=/usr/local/src/conda/${PKG_NAME}-${PKG_VERSION} -fdebug-prefix-map=${PREFIX}=/usr/local/src/conda-prefix
+GXX=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-g++
mkdir: cannot create directory 'build': File exists
Traceback (most recent call last):
File "/root/miniconda/bin/conda-build", line 11, in <module>
sys.exit(main())
File "/root/miniconda/lib/python3.7/site-packages/conda_build/cli/main_build.py", line 469, in main
execute(sys.argv[1:])
File "/root/miniconda/lib/python3.7/site-packages/conda_build/cli/main_build.py", line 460, in execute
verify=args.verify, variants=args.variants)
File "/root/miniconda/lib/python3.7/site-packages/conda_build/api.py", line 209, in build
notest=notest, need_source_download=need_source_download, variants=variants)
File "/root/miniconda/lib/python3.7/site-packages/conda_build/build.py", line 2344, in build_tree
notest=notest,
File "/root/miniconda/lib/python3.7/site-packages/conda_build/build.py", line 1492, in build
cwd=src_dir, stats=build_stats)
File "/root/miniconda/lib/python3.7/site-packages/conda_build/utils.py", line 398, in check_call_env
return _func_defaulting_env_to_os_environ('call', *popenargs, **kwargs)
File "/root/miniconda/lib/python3.7/site-packages/conda_build/utils.py", line 378, in _func_defaulting_env_to_os_environ
raise subprocess.CalledProcessError(proc.returncode, _args)
subprocess.CalledProcessError: Command '['/bin/bash', '-o', 'errexit', '/root/miniconda/conda-bld/singa_1583682553831/work/conda_build.sh']' returned non-zero exit status 1.
```
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[GitHub] [singa] nudles commented on issue #623: Some consultations using
the conda build in singa/tool/conda/singa
Posted by GitBox <gi...@apache.org>.
nudles commented on issue #623: Some consultations using the conda build in singa/tool/conda/singa
URL: https://github.com/apache/singa/issues/623#issuecomment-596174104
you may need to add the conda-forge channel manually in the build command
`conda-build -c conda-forge ...`
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With regards,
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[GitHub] [singa] chrishkchris commented on issue #623: Some consultations
using the conda build in singa/tool/conda/singa
Posted by GitBox <gi...@apache.org>.
chrishkchris commented on issue #623: Some consultations using the conda build in singa/tool/conda/singa
URL: https://github.com/apache/singa/issues/623#issuecomment-596210949
thanks, keeps trying
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To respond to the message, please log on to GitHub and use the
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With regards,
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[GitHub] [singa] chrishkchris commented on issue #623: Some consultations
using the conda build in singa/tool/conda/singa
Posted by GitBox <gi...@apache.org>.
chrishkchris commented on issue #623: Some consultations using the conda build in singa/tool/conda/singa
URL: https://github.com/apache/singa/issues/623#issuecomment-596301307
Thanks a lot, seems I have learnt the basic how to build a singa conda package now in a docker container
The following is the build log
```
root@3c17fd6cb72e:~/dcsysh/singa/tool/conda/singa# conda-build -c conda-forge . --python 3.6
No numpy version specified in conda_build_config.yaml. Falling back to default numpy value of 1.11
WARNING:conda_build.metadata:No numpy version specified in conda_build_config.yaml. Falling back to default numpy value of 1.11
Copying /root/dcsysh/singa to /root/miniconda/conda-bld/singa_1583719327583/work/
Adding in variants from internal_defaults
INFO:conda_build.variants:Adding in variants from internal_defaults
Adding in variants from /root/dcsysh/singa/tool/conda/singa/conda_build_config.yaml
INFO:conda_build.variants:Adding in variants from /root/dcsysh/singa/tool/conda/singa/conda_build_config.yaml
Adding in variants from config.variant
INFO:conda_build.variants:Adding in variants from config.variant
/root/miniconda/lib/python3.7/site-packages/conda_build/environ.py:427: UserWarning: The environment variable 'CUDA' is being passed through with value '10.0'. If you are splitting build and test phases with --no-test, please ensure that this value is also set similarly at test time.
UserWarning
Attempting to finalize metadata for singa
INFO:conda_build.metadata:Attempting to finalize metadata for singa
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
Adding .* to spec 'libopenblas 0.3.3' to ensure satisfiability. Please consider putting {{ var_name }}.* or some relational operator (>/</>=/<=) on this spec in meta.yaml, or if req is also a build req, using {{ pin_compatible() }} jinja2 function instead. See https://conda.io/docs/user-guide/tasks/build-packages/variants.html#pinning-at-the-variant-level
WARNING:conda_build.utils:Adding .* to spec 'libopenblas 0.3.3' to ensure satisfiability. Please consider putting {{ var_name }}.* or some relational operator (>/</>=/<=) on this spec in meta.yaml, or if req is also a build req, using {{ pin_compatible() }} jinja2 function instead. See https://conda.io/docs/user-guide/tasks/build-packages/variants.html#pinning-at-the-variant-level
WARNING conda_build.utils:ensure_valid_spec(1749): Adding .* to spec 'libopenblas 0.3.3' to ensure satisfiability. Please consider putting {{ var_name }}.* or some relational operator (>/</>=/<=) on this spec in meta.yaml, or if req is also a build req, using {{ pin_compatible() }} jinja2 function instead. See https://conda.io/docs/user-guide/tasks/build-packages/variants.html#pinning-at-the-variant-level
Adding .* to spec 'libprotobuf 3.6.1' to ensure satisfiability. Please consider putting {{ var_name }}.* or some relational operator (>/</>=/<=) on this spec in meta.yaml, or if req is also a build req, using {{ pin_compatible() }} jinja2 function instead. See https://conda.io/docs/user-guide/tasks/build-packages/variants.html#pinning-at-the-variant-level
WARNING:conda_build.utils:Adding .* to spec 'libprotobuf 3.6.1' to ensure satisfiability. Please consider putting {{ var_name }}.* or some relational operator (>/</>=/<=) on this spec in meta.yaml, or if req is also a build req, using {{ pin_compatible() }} jinja2 function instead. See https://conda.io/docs/user-guide/tasks/build-packages/variants.html#pinning-at-the-variant-level
WARNING conda_build.utils:ensure_valid_spec(1749): Adding .* to spec 'libprotobuf 3.6.1' to ensure satisfiability. Please consider putting {{ var_name }}.* or some relational operator (>/</>=/<=) on this spec in meta.yaml, or if req is also a build req, using {{ pin_compatible() }} jinja2 function instead. See https://conda.io/docs/user-guide/tasks/build-packages/variants.html#pinning-at-the-variant-level
BUILD START: ['singa-2.1.0.dev-cudnn7.3.1_cuda10.0_py36.tar.bz2']
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
## Package Plan ##
environment location: /root/miniconda/conda-bld/singa_1583719327583/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl
The following NEW packages will be INSTALLED:
_libgcc_mutex: 0.1-conda_forge conda-forge
_openmp_mutex: 4.5-0_gnu conda-forge
blas: 1.1-openblas conda-forge
ca-certificates: 2019.11.28-hecc5488_0 conda-forge
certifi: 2019.11.28-py36_0 conda-forge
cudatoolkit: 10.0.130-0
cudnn: 7.3.1-cuda10.0_0
glog: 0.3.5-hf484d3e_1001 conda-forge
intel-openmp: 2018.0.3-0
ld_impl_linux-64: 2.33.1-h53a641e_8 conda-forge
libffi: 3.2.1-he1b5a44_1006 conda-forge
libgcc-ng: 9.2.0-h24d8f2e_2 conda-forge
libgfortran-ng: 7.3.0-hdf63c60_5 conda-forge
libgomp: 9.2.0-h24d8f2e_2 conda-forge
libmklml: 2018.0.3-0
libprotobuf: 3.6.1-hdbcaa40_1001 conda-forge
libstdcxx-ng: 9.2.0-hdf63c60_2 conda-forge
mkl-dnn: 0.14-h6bb024c_0
ncurses: 6.1-hf484d3e_1002 conda-forge
numpy: 1.16.0-py36_blas_openblash1522bff_1000 conda-forge [blas_openblas]
openblas: 0.3.3-h9ac9557_1001 conda-forge
openssl: 1.1.1d-h516909a_0 conda-forge
pcre: 8.44-he1b5a44_0 conda-forge
pip: 20.0.2-py_2 conda-forge
protobuf: 3.6.1-py36hf484d3e_1001 conda-forge
python: 3.6.10-h9d8adfe_1009_cpython conda-forge
python_abi: 3.6-1_cp36m conda-forge
readline: 8.0-hf8c457e_0 conda-forge
setuptools: 46.0.0-py36_0 conda-forge
six: 1.14.0-py36_0 conda-forge
sqlite: 3.30.1-hcee41ef_0 conda-forge
swig: 3.0.12-hf484d3e_1003 conda-forge
tk: 8.6.10-hed695b0_0 conda-forge
wheel: 0.34.2-py_1 conda-forge
xz: 5.2.4-h14c3975_1001 conda-forge
zlib: 1.2.11-h516909a_1006 conda-forge
Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
## Package Plan ##
environment location: /root/miniconda/conda-bld/singa_1583719327583/_build_env
The following NEW packages will be INSTALLED:
_libgcc_mutex: 0.1-conda_forge conda-forge
_openmp_mutex: 4.5-0_gnu conda-forge
binutils_impl_linux-64: 2.28.1-had2808c_3
binutils_linux-64: 5.4.0-had2808c_24
bzip2: 1.0.8-h516909a_2 conda-forge
ca-certificates: 2019.11.28-hecc5488_0 conda-forge
cmake: 3.16.4-h28c56e5_0 conda-forge
expat: 2.2.9-he1b5a44_2 conda-forge
gcc_impl_linux-64: 5.4.0-habb00fd_3
gcc_linux-64: 5.4.0-h98af8de_24
gxx_impl_linux-64: 5.4.0-hdf63c60_3
gxx_linux-64: 5.4.0-h98af8de_24
krb5: 1.16.4-h2fd8d38_0 conda-forge
libcurl: 7.68.0-hda55be3_0 conda-forge
libedit: 3.1.20170329-hf8c457e_1001 conda-forge
libgcc-ng: 9.2.0-h24d8f2e_2 conda-forge
libgomp: 9.2.0-h24d8f2e_2 conda-forge
libssh2: 1.8.2-h22169c7_2 conda-forge
libstdcxx-ng: 9.2.0-hdf63c60_2 conda-forge
libuv: 1.34.0-h516909a_0 conda-forge
make: 4.3-h516909a_0 conda-forge
ncurses: 6.1-hf484d3e_1002 conda-forge
openssl: 1.1.1d-h516909a_0 conda-forge
rhash: 1.3.6-h14c3975_1001 conda-forge
tk: 8.6.10-hed695b0_0 conda-forge
xz: 5.2.4-h14c3975_1001 conda-forge
zlib: 1.2.11-h516909a_1006 conda-forge
Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
source tree in: /root/miniconda/conda-bld/singa_1583719327583/work
export PREFIX=/root/miniconda/conda-bld/singa_1583719327583/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl
export BUILD_PREFIX=/root/miniconda/conda-bld/singa_1583719327583/_build_env
export SRC_DIR=/root/miniconda/conda-bld/singa_1583719327583/work
INFO: activate-binutils_linux-64.sh made the following environmental changes:
+ADDR2LINE=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-addr2line
+AR=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-ar
+AS=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-as
+CXXFILT=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-c++filt
+ELFEDIT=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-elfedit
+GPROF=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-gprof
+HOST=x86_64-conda_cos6-linux-gnu
+LD=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-ld
+LD_GOLD=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-ld.gold
+NM=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-nm
+OBJCOPY=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-objcopy
+OBJDUMP=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-objdump
+RANLIB=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-ranlib
+READELF=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-readelf
+SIZE=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-size
+STRINGS=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-strings
+STRIP=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-strip
INFO: activate-gcc_linux-64.sh made the following environmental changes:
+CC=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-cc
+CFLAGS=-march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -O2 -pipe -I$PREFIX/include -fdebug-prefix-map=${SRC_DIR}=/usr/local/src/conda/${PKG_NAME}-${PKG_VERSION} -fdebug-prefix-map=${PREFIX}=/usr/local/src/conda-prefix
+CPP=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-cpp
+CPPFLAGS=-DNDEBUG -D_FORTIFY_SOURCE=2 -O2
+DEBUG_CFLAGS=-march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-all -Og -g -Wall -Wextra -fvar-tracking-assignments -pipe -I$PREFIX/include -fdebug-prefix-map=${SRC_DIR}=/usr/local/src/conda/${PKG_NAME}-${PKG_VERSION} -fdebug-prefix-map=${PREFIX}=/usr/local/src/conda-prefix
+DEBUG_CPPFLAGS=-D_DEBUG -D_FORTIFY_SOURCE=2 -Og
+GCC=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-gcc
+GCC_AR=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-gcc-ar
+GCC_NM=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-gcc-nm
+GCC_RANLIB=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-gcc-ranlib
+LDFLAGS=-Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-rpath,$PREFIX/lib -L$PREFIX/lib
+_PYTHON_SYSCONFIGDATA_NAME=_sysconfigdata_x86_64_conda_cos6_linux_gnu
INFO: activate-gxx_linux-64.sh made the following environmental changes:
+CXX=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-c++
+CXXFLAGS=-fvisibility-inlines-hidden -std=c++11 -fmessage-length=0 -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -O2 -pipe -I$PREFIX/include -fdebug-prefix-map=${SRC_DIR}=/usr/local/src/conda/${PKG_NAME}-${PKG_VERSION} -fdebug-prefix-map=${PREFIX}=/usr/local/src/conda-prefix
+DEBUG_CXXFLAGS=-fvisibility-inlines-hidden -std=c++11 -fmessage-length=0 -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-all -Og -g -Wall -Wextra -fvar-tracking-assignments -pipe -I$PREFIX/include -fdebug-prefix-map=${SRC_DIR}=/usr/local/src/conda/${PKG_NAME}-${PKG_VERSION} -fdebug-prefix-map=${PREFIX}=/usr/local/src/conda-prefix
+GXX=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-g++
-- The C compiler identification is GNU 5.4.0
-- The CXX compiler identification is GNU 5.4.0
-- Check for working C compiler: $BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-cc
-- Check for working C compiler: $BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: $BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-c++
-- Check for working CXX compiler: $BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found Protobuf: $PREFIX/lib/libprotobuf.so;-lpthread (found suitable version "3.6.1", minimum required is "3.0")
-- Found CBLAS: $PREFIX/include
-- Found GLOG: $PREFIX/include
-- Found Threads: TRUE
CMake Warning at /root/miniconda/conda-bld/singa_1583719327583/_build_env/share/cmake-3.16/Modules/FindCUDA.cmake:900 (message):
Expecting to find librt for libcudart_static, but didn't find it.
Call Stack (most recent call first):
cmake/Cuda.cmake:20 (FIND_PACKAGE)
cmake/Dependencies.cmake:85 (INCLUDE)
CMakeLists.txt:75 (INCLUDE)
-- Found cuda_v10.0
-- Found CUDNN: $PREFIX/include
-- Found Cudnn_7301 at $PREFIX/include $PREFIX/lib/libcudnn.so
-- Found PythonInterp: $PREFIX/bin/python3 (found suitable version "3.6.10", minimum required is "3")
-- Found PythonLibs: $PREFIX/lib/libpython3.6m.so (found suitable version "3.6.10", minimum required is "3")
-- Found SWIG: $PREFIX/bin/swig (found suitable version "3.0.12", minimum required is "3.0.10")
-- Configuring done
-- Generating done
CMake Warning:
Manually-specified variables were not used by the project:
USE_DNNL
-- Build files have been written to: $SRC_DIR/build
make[1]: Entering directory '$SRC_DIR/build'
make[2]: Entering directory '$SRC_DIR/build'
Scanning dependencies of target cnmem
make[2]: Leaving directory '$SRC_DIR/build'
make[2]: Entering directory '$SRC_DIR/build'
[ 1%] Creating directories for 'cnmem'
[ 2%] Performing download step (git clone) for 'cnmem'
Cloning into 'cnmem'...
Already on 'master'
Your branch is up-to-date with 'origin/master'.
[ 3%] No patch step for 'cnmem'
[ 4%] Performing update step for 'cnmem'
Current branch master is up to date.
[ 5%] Performing configure step for 'cnmem'
-- The C compiler identification is GNU 5.4.0
-- The CXX compiler identification is GNU 5.4.0
-- Check for working C compiler: $BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-cc
-- Check for working C compiler: $BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: $BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-c++
-- Check for working CXX compiler: $BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
CMake Warning at /root/miniconda/conda-bld/singa_1583719327583/_build_env/share/cmake-3.16/Modules/FindCUDA.cmake:900 (message):
Expecting to find librt for libcudart_static, but didn't find it.
Call Stack (most recent call first):
CMakeLists.txt:6 (find_package)
-- Configuring done
-- Generating done
-- Build files have been written to: $SRC_DIR/build/cnmem-prefix/src/cnmem-build
[ 6%] Performing build step for 'cnmem'
make[3]: Entering directory '$SRC_DIR/build/cnmem-prefix/src/cnmem-build'
make[4]: Entering directory '$SRC_DIR/build/cnmem-prefix/src/cnmem-build'
make[5]: Entering directory '$SRC_DIR/build/cnmem-prefix/src/cnmem-build'
Scanning dependencies of target cnmem
make[5]: Leaving directory '$SRC_DIR/build/cnmem-prefix/src/cnmem-build'
make[5]: Entering directory '$SRC_DIR/build/cnmem-prefix/src/cnmem-build'
[ 50%] Building CXX object CMakeFiles/cnmem.dir/src/cnmem.cpp.o
[100%] Linking CXX static library libcnmem.a
make[5]: Leaving directory '$SRC_DIR/build/cnmem-prefix/src/cnmem-build'
[100%] Built target cnmem
make[4]: Leaving directory '$SRC_DIR/build/cnmem-prefix/src/cnmem-build'
make[3]: Leaving directory '$SRC_DIR/build/cnmem-prefix/src/cnmem-build'
[ 7%] Performing install step for 'cnmem'
make[3]: Entering directory '$SRC_DIR/build/cnmem-prefix/src/cnmem-build'
make[4]: Entering directory '$SRC_DIR/build/cnmem-prefix/src/cnmem-build'
make[5]: Entering directory '$SRC_DIR/build/cnmem-prefix/src/cnmem-build'
make[5]: Leaving directory '$SRC_DIR/build/cnmem-prefix/src/cnmem-build'
[100%] Built target cnmem
make[4]: Leaving directory '$SRC_DIR/build/cnmem-prefix/src/cnmem-build'
Install the project...
-- Install configuration: ""
-- Installing: $SRC_DIR/build/lib/libcnmem.a
-- Installing: $SRC_DIR/build/include/cnmem.h
make[3]: Leaving directory '$SRC_DIR/build/cnmem-prefix/src/cnmem-build'
[ 8%] Completed 'cnmem'
make[2]: Leaving directory '$SRC_DIR/build'
[ 8%] Built target cnmem
make[2]: Entering directory '$SRC_DIR/build'
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[libprotobuf WARNING google/protobuf/compiler/parser.cc:562] No syntax specified for the proto file: io.proto. Please use 'syntax = "proto2";' or 'syntax = "proto3";' to specify a syntax version. (Defaulted to proto2 syntax.)
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/root/miniconda/conda-bld/singa_1583719327583/work/src/core/tensor/tensor.cc: In function 'void singa::SoftMax(const singa::Tensor&, singa::Tensor*, int)':
/root/miniconda/conda-bld/singa_1583719327583/work/src/core/tensor/tensor.cc:758:13: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (i < axis)
^
In file included from /root/miniconda/conda-bld/singa_1583719327583/work/include/singa/utils/logging.h:31:0,
from /root/miniconda/conda-bld/singa_1583719327583/work/include/singa/core/common.h:26,
from /root/miniconda/conda-bld/singa_1583719327583/work/include/singa/core/tensor.h:26,
from /root/miniconda/conda-bld/singa_1583719327583/work/src/core/tensor/tensor.cc:18:
/root/miniconda/conda-bld/singa_1583719327583/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl/include/glog/logging.h: In instantiation of 'std::__cxx11::string* google::Check_LEImpl(const T1&, const T2&, const char*) [with T1 = long unsigned int; T2 = int; std::__cxx11::string = std::__cxx11::basic_string<char>]':
/root/miniconda/conda-bld/singa_1583719327583/work/src/core/tensor/./tensor_math_cuda.h:58:3: required from here
/root/miniconda/conda-bld/singa_1583719327583/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl/include/glog/logging.h:719:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
DEFINE_CHECK_OP_IMPL(Check_LE, <=)
^
/root/miniconda/conda-bld/singa_1583719327583/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl/include/glog/logging.h:148:53: note: in definition of macro 'GOOGLE_PREDICT_TRUE'
#define GOOGLE_PREDICT_TRUE(x) (__builtin_expect(!!(x), 1))
^
/root/miniconda/conda-bld/singa_1583719327583/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl/include/glog/logging.h:719:1: note: in expansion of macro 'DEFINE_CHECK_OP_IMPL'
DEFINE_CHECK_OP_IMPL(Check_LE, <=)
^
/root/miniconda/conda-bld/singa_1583719327583/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl/include/glog/logging.h: In instantiation of 'std::__cxx11::string* google::Check_EQImpl(const T1&, const T2&, const char*) [with T1 = long unsigned int; T2 = int; std::__cxx11::string = std::__cxx11::basic_string<char>]':
/root/miniconda/conda-bld/singa_1583719327583/work/src/core/tensor/tensor.cc:353:7: required from here
/root/miniconda/conda-bld/singa_1583719327583/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl/include/glog/logging.h:717:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
DEFINE_CHECK_OP_IMPL(Check_EQ, ==) // Compilation error with CHECK_EQ(NULL, x)?
^
/root/miniconda/conda-bld/singa_1583719327583/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl/include/glog/logging.h:148:53: note: in definition of macro 'GOOGLE_PREDICT_TRUE'
#define GOOGLE_PREDICT_TRUE(x) (__builtin_expect(!!(x), 1))
^
/root/miniconda/conda-bld/singa_1583719327583/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl/include/glog/logging.h:717:1: note: in expansion of macro 'DEFINE_CHECK_OP_IMPL'
DEFINE_CHECK_OP_IMPL(Check_EQ, ==) // Compilation error with CHECK_EQ(NULL, x)?
^
/root/miniconda/conda-bld/singa_1583719327583/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl/include/glog/logging.h: In instantiation of 'std::__cxx11::string* google::Check_GEImpl(const T1&, const T2&, const char*) [with T1 = long unsigned int; T2 = int; std::__cxx11::string = std::__cxx11::basic_string<char>]':
/root/miniconda/conda-bld/singa_1583719327583/work/src/core/tensor/tensor.cc:506:5: required from here
/root/miniconda/conda-bld/singa_1583719327583/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl/include/glog/logging.h:721:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
DEFINE_CHECK_OP_IMPL(Check_GE, >=)
^
/root/miniconda/conda-bld/singa_1583719327583/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl/include/glog/logging.h:148:53: note: in definition of macro 'GOOGLE_PREDICT_TRUE'
#define GOOGLE_PREDICT_TRUE(x) (__builtin_expect(!!(x), 1))
^
/root/miniconda/conda-bld/singa_1583719327583/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl/include/glog/logging.h:721:1: note: in expansion of macro 'DEFINE_CHECK_OP_IMPL'
DEFINE_CHECK_OP_IMPL(Check_GE, >=)
^
[ 46%] Building CXX object src/CMakeFiles/singa_objects.dir/model/feed_forward_net.cc.o
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In file included from /root/miniconda/conda-bld/singa_1583719327583/work/include/singa/utils/logging.h:31:0,
from /root/miniconda/conda-bld/singa_1583719327583/work/include/singa/core/common.h:26,
from /root/miniconda/conda-bld/singa_1583719327583/work/include/singa/core/tensor.h:26,
from /root/miniconda/conda-bld/singa_1583719327583/work/include/singa/model/layer.h:27,
from /root/miniconda/conda-bld/singa_1583719327583/work/src/model/layer/concat.cc:19:
/root/miniconda/conda-bld/singa_1583719327583/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl/include/glog/logging.h: In instantiation of 'std::__cxx11::string* google::Check_GEImpl(const T1&, const T2&, const char*) [with T1 = long unsigned int; T2 = int; std::__cxx11::string = std::__cxx11::basic_string<char>]':
/root/miniconda/conda-bld/singa_1583719327583/work/src/model/layer/concat.cc:47:8: required from here
/root/miniconda/conda-bld/singa_1583719327583/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl/include/glog/logging.h:721:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
DEFINE_CHECK_OP_IMPL(Check_GE, >=)
^
/root/miniconda/conda-bld/singa_1583719327583/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl/include/glog/logging.h:148:53: note: in definition of macro 'GOOGLE_PREDICT_TRUE'
#define GOOGLE_PREDICT_TRUE(x) (__builtin_expect(!!(x), 1))
^
/root/miniconda/conda-bld/singa_1583719327583/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl/include/glog/logging.h:721:1: note: in expansion of macro 'DEFINE_CHECK_OP_IMPL'
DEFINE_CHECK_OP_IMPL(Check_GE, >=)
^
[ 50%] Building CXX object src/CMakeFiles/singa_objects.dir/model/layer/convolution.cc.o
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In file included from /root/miniconda/conda-bld/singa_1583719327583/work/include/singa/utils/logging.h:31:0,
from /root/miniconda/conda-bld/singa_1583719327583/work/include/singa/core/common.h:26,
from /root/miniconda/conda-bld/singa_1583719327583/work/include/singa/core/tensor.h:26,
from /root/miniconda/conda-bld/singa_1583719327583/work/include/singa/model/layer.h:27,
from /root/miniconda/conda-bld/singa_1583719327583/work/src/model/layer/slice.cc:19:
/root/miniconda/conda-bld/singa_1583719327583/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl/include/glog/logging.h: In instantiation of 'std::__cxx11::string* google::Check_GEImpl(const T1&, const T2&, const char*) [with T1 = int; T2 = unsigned int; std::__cxx11::string = std::__cxx11::basic_string<char>]':
/root/miniconda/conda-bld/singa_1583719327583/work/src/model/layer/slice.cc:33:3: required from here
/root/miniconda/conda-bld/singa_1583719327583/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl/include/glog/logging.h:721:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
DEFINE_CHECK_OP_IMPL(Check_GE, >=)
^
/root/miniconda/conda-bld/singa_1583719327583/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl/include/glog/logging.h:148:53: note: in definition of macro 'GOOGLE_PREDICT_TRUE'
#define GOOGLE_PREDICT_TRUE(x) (__builtin_expect(!!(x), 1))
^
/root/miniconda/conda-bld/singa_1583719327583/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl/include/glog/logging.h:721:1: note: in expansion of macro 'DEFINE_CHECK_OP_IMPL'
DEFINE_CHECK_OP_IMPL(Check_GE, >=)
^
[ 71%] Building CXX object src/CMakeFiles/singa_objects.dir/model/layer/softmax.cc.o
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/root/miniconda/conda-bld/singa_1583719327583/work/src/model/operation/pooling.cc: In function 'singa::Tensor singa::GpuPoolingForward(const singa::CudnnPoolingHandle&, const singa::Tensor&)':
/root/miniconda/conda-bld/singa_1583719327583/work/src/model/operation/pooling.cc:220:51: warning: narrowing conversion of '(int)(& cph)->singa::CudnnPoolingHandle::<anonymous>.singa::PoolingHandle::batchsize' from 'int' to 'long unsigned int' inside { } [-Wnarrowing]
x.device(), x.data_type());
^
/root/miniconda/conda-bld/singa_1583719327583/work/src/model/operation/pooling.cc:219:31: warning: narrowing conversion of '(& cph)->singa::CudnnPoolingHandle::<anonymous>.singa::PoolingHandle::batchsize' from 'const int' to 'long unsigned int' inside { } [-Wnarrowing]
Tensor output = Tensor({cph.batchsize, cph.channels, cph.pooled_height, cph.pooled_width},
^
/root/miniconda/conda-bld/singa_1583719327583/work/src/model/operation/pooling.cc:220:51: warning: narrowing conversion of '(int)(& cph)->singa::CudnnPoolingHandle::<anonymous>.singa::PoolingHandle::channels' from 'int' to 'long unsigned int' inside { } [-Wnarrowing]
x.device(), x.data_type());
^
/root/miniconda/conda-bld/singa_1583719327583/work/src/model/operation/pooling.cc:219:46: warning: narrowing conversion of '(& cph)->singa::CudnnPoolingHandle::<anonymous>.singa::PoolingHandle::channels' from 'const int' to 'long unsigned int' inside { } [-Wnarrowing]
Tensor output = Tensor({cph.batchsize, cph.channels, cph.pooled_height, cph.pooled_width},
^
/root/miniconda/conda-bld/singa_1583719327583/work/src/model/operation/pooling.cc:220:51: warning: narrowing conversion of '(int)(& cph)->singa::CudnnPoolingHandle::<anonymous>.singa::PoolingHandle::pooled_height' from 'int' to 'long unsigned int' inside { } [-Wnarrowing]
x.device(), x.data_type());
^
/root/miniconda/conda-bld/singa_1583719327583/work/src/model/operation/pooling.cc:219:60: warning: narrowing conversion of '(& cph)->singa::CudnnPoolingHandle::<anonymous>.singa::PoolingHandle::pooled_height' from 'const int' to 'long unsigned int' inside { } [-Wnarrowing]
Tensor output = Tensor({cph.batchsize, cph.channels, cph.pooled_height, cph.pooled_width},
^
/root/miniconda/conda-bld/singa_1583719327583/work/src/model/operation/pooling.cc:220:51: warning: narrowing conversion of '(int)(& cph)->singa::CudnnPoolingHandle::<anonymous>.singa::PoolingHandle::pooled_width' from 'int' to 'long unsigned int' inside { } [-Wnarrowing]
x.device(), x.data_type());
^
/root/miniconda/conda-bld/singa_1583719327583/work/src/model/operation/pooling.cc:219:79: warning: narrowing conversion of '(& cph)->singa::CudnnPoolingHandle::<anonymous>.singa::PoolingHandle::pooled_width' from 'const int' to 'long unsigned int' inside { } [-Wnarrowing]
Tensor output = Tensor({cph.batchsize, cph.channels, cph.pooled_height, cph.pooled_width},
^
make[2]: Leaving directory '$SRC_DIR/build'
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Scanning dependencies of target singa
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[ 94%] Running Python protocol buffer compiler on $SRC_DIR/src/proto/core.proto
[libprotobuf WARNING google/protobuf/compiler/parser.cc:562] No syntax specified for the proto file: core.proto. Please use 'syntax = "proto2";' or 'syntax = "proto3";' to specify a syntax version. (Defaulted to proto2 syntax.)
[ 95%] Running Python protocol buffer compiler on $SRC_DIR/src/proto/io.proto
[libprotobuf WARNING google/protobuf/compiler/parser.cc:562] No syntax specified for the proto file: io.proto. Please use 'syntax = "proto2";' or 'syntax = "proto3";' to specify a syntax version. (Defaulted to proto2 syntax.)
[ 96%] Running Python protocol buffer compiler on $SRC_DIR/src/proto/model.proto
[libprotobuf WARNING google/protobuf/compiler/parser.cc:562] No syntax specified for the proto file: model.proto. Please use 'syntax = "proto2";' or 'syntax = "proto3";' to specify a syntax version. (Defaulted to proto2 syntax.)
Scanning dependencies of target _singa_wrap
make[2]: Leaving directory '$SRC_DIR/build'
make[2]: Entering directory '$SRC_DIR/build'
[ 97%] Building CXX object python/CMakeFiles/_singa_wrap.dir/__/src/api/singa_wrap.cxx.o
[ 98%] Linking CXX shared library singa/_singa_wrap.so
make[2]: Leaving directory '$SRC_DIR/build'
[100%] Built target _singa_wrap
make[1]: Leaving directory '$SRC_DIR/build'
CMake Warning at /root/miniconda/conda-bld/singa_1583719327583/_build_env/share/cmake-3.16/Modules/FindCUDA.cmake:900 (message):
Expecting to find librt for libcudart_static, but didn't find it.
Call Stack (most recent call first):
cmake/Cuda.cmake:20 (FIND_PACKAGE)
cmake/Dependencies.cmake:85 (INCLUDE)
CMakeLists.txt:75 (INCLUDE)
-- Found cuda_v10.0
-- Found Cudnn_7301 at $PREFIX/include $PREFIX/lib/libcudnn.so
-- Configuring done
-- Generating done
-- Build files have been written to: $SRC_DIR/build
make[1]: Entering directory '$SRC_DIR/build'
make[2]: Entering directory '$SRC_DIR/build'
make[2]: Leaving directory '$SRC_DIR/build'
make[2]: Entering directory '$SRC_DIR/build'
[ 1%] Performing update step for 'cnmem'
Current branch master is up to date.
[ 2%] Performing configure step for 'cnmem'
CMake Warning at /root/miniconda/conda-bld/singa_1583719327583/_build_env/share/cmake-3.16/Modules/FindCUDA.cmake:900 (message):
Expecting to find librt for libcudart_static, but didn't find it.
Call Stack (most recent call first):
CMakeLists.txt:6 (find_package)
-- Configuring done
-- Generating done
-- Build files have been written to: $SRC_DIR/build/cnmem-prefix/src/cnmem-build
[ 3%] Performing build step for 'cnmem'
make[3]: Entering directory '$SRC_DIR/build/cnmem-prefix/src/cnmem-build'
make[4]: Entering directory '$SRC_DIR/build/cnmem-prefix/src/cnmem-build'
make[5]: Entering directory '$SRC_DIR/build/cnmem-prefix/src/cnmem-build'
make[5]: Leaving directory '$SRC_DIR/build/cnmem-prefix/src/cnmem-build'
[100%] Built target cnmem
make[4]: Leaving directory '$SRC_DIR/build/cnmem-prefix/src/cnmem-build'
make[3]: Leaving directory '$SRC_DIR/build/cnmem-prefix/src/cnmem-build'
[ 4%] Performing install step for 'cnmem'
make[3]: Entering directory '$SRC_DIR/build/cnmem-prefix/src/cnmem-build'
make[4]: Entering directory '$SRC_DIR/build/cnmem-prefix/src/cnmem-build'
make[5]: Entering directory '$SRC_DIR/build/cnmem-prefix/src/cnmem-build'
make[5]: Leaving directory '$SRC_DIR/build/cnmem-prefix/src/cnmem-build'
[100%] Built target cnmem
make[4]: Leaving directory '$SRC_DIR/build/cnmem-prefix/src/cnmem-build'
Install the project...
-- Install configuration: ""
-- Up-to-date: $SRC_DIR/build/lib/libcnmem.a
-- Up-to-date: $SRC_DIR/build/include/cnmem.h
make[3]: Leaving directory '$SRC_DIR/build/cnmem-prefix/src/cnmem-build'
[ 5%] Completed 'cnmem'
make[2]: Leaving directory '$SRC_DIR/build'
[ 8%] Built target cnmem
make[2]: Entering directory '$SRC_DIR/build'
make[2]: Leaving directory '$SRC_DIR/build'
make[2]: Entering directory '$SRC_DIR/build'
[ 9%] Copying Protobuf headers
make[2]: Leaving directory '$SRC_DIR/build'
[ 13%] Built target copy_protobuf
make[2]: Entering directory '$SRC_DIR/build'
make[2]: Leaving directory '$SRC_DIR/build'
[ 90%] Built target singa_objects
make[2]: Entering directory '$SRC_DIR/build'
make[2]: Leaving directory '$SRC_DIR/build'
make[2]: Entering directory '$SRC_DIR/build'
[ 91%] Linking CXX shared library ../lib/libsinga.so
make[2]: Leaving directory '$SRC_DIR/build'
[ 92%] Built target singa
make[2]: Entering directory '$SRC_DIR/build'
Scanning dependencies of target _singa_wrap
make[2]: Leaving directory '$SRC_DIR/build'
make[2]: Entering directory '$SRC_DIR/build'
[ 93%] Building CXX object python/CMakeFiles/_singa_wrap.dir/__/src/api/singa_wrap.cxx.o
[ 94%] Linking CXX shared library singa/_singa_wrap.so
make[2]: Leaving directory '$SRC_DIR/build'
[100%] Built target _singa_wrap
make[1]: Leaving directory '$SRC_DIR/build'
Install the project...
-- Install configuration: ""
-- Up-to-date: $PREFIX//include
-- Installing: $PREFIX//include/singa
-- Installing: $PREFIX//include/singa/singa_config.h
-- Installing: $PREFIX//include/singa/proto
-- Installing: $PREFIX//include/singa/proto/model.pb.h
-- Installing: $PREFIX//include/singa/proto/caffe.pb.h
-- Installing: $PREFIX//include/singa/proto/core.pb.h
-- Installing: $PREFIX//include/singa/proto/io.pb.h
-- Installing: $PREFIX//include/cnmem.h
-- Up-to-date: $PREFIX/include//singa
-- Installing: $PREFIX/include//singa/core
-- Installing: $PREFIX/include//singa/core/device.h
-- Installing: $PREFIX/include//singa/core/tensor.h
-- Installing: $PREFIX/include//singa/core/memory.h
-- Installing: $PREFIX/include//singa/core/scheduler.h
-- Installing: $PREFIX/include//singa/core/common.h
-- Installing: $PREFIX/include//singa/utils
-- Installing: $PREFIX/include//singa/utils/tinydir.h
-- Installing: $PREFIX/include//singa/utils/factory.h
-- Installing: $PREFIX/include//singa/utils/logging.h
-- Installing: $PREFIX/include//singa/utils/safe_queue.h
-- Installing: $PREFIX/include//singa/utils/singleton.h
-- Installing: $PREFIX/include//singa/utils/cuda_utils.h
-- Installing: $PREFIX/include//singa/utils/channel.h
-- Installing: $PREFIX/include//singa/utils/timer.h
-- Installing: $PREFIX/include//singa/utils/integer.h
-- Installing: $PREFIX/include//singa/utils/opencl_utils.h
-- Installing: $PREFIX/include//singa/utils/string.h
-- Installing: $PREFIX/include//singa/utils/mkldnn_utils.h
-- Installing: $PREFIX/include//singa/model
-- Installing: $PREFIX/include//singa/model/loss.h
-- Installing: $PREFIX/include//singa/model/updater.h
-- Installing: $PREFIX/include//singa/model/layer.h
-- Installing: $PREFIX/include//singa/model/initializer.h
-- Installing: $PREFIX/include//singa/model/optimizer.h
-- Installing: $PREFIX/include//singa/model/metric.h
-- Installing: $PREFIX/include//singa/model/feed_forward_net.h
-- Installing: $PREFIX/include//singa/io
-- Installing: $PREFIX/include//singa/io/encoder.h
-- Installing: $PREFIX/include//singa/io/reader.h
-- Installing: $PREFIX/include//singa/io/writer.h
-- Installing: $PREFIX/include//singa/io/integer.h
-- Installing: $PREFIX/include//singa/io/network.h
-- Installing: $PREFIX/include//singa/io/snapshot.h
-- Installing: $PREFIX/include//singa/io/communicator.h
-- Installing: $PREFIX/include//singa/io/transformer.h
-- Installing: $PREFIX/include//singa/io/decoder.h
-- Up-to-date: $PREFIX//lib
-- Installing: $PREFIX//lib/libcnmem.a
-- Installing: $PREFIX//lib/libsinga.so
running install
running bdist_egg
running egg_info
creating singa.egg-info
writing singa.egg-info/PKG-INFO
writing dependency_links to singa.egg-info/dependency_links.txt
writing entry points to singa.egg-info/entry_points.txt
writing top-level names to singa.egg-info/top_level.txt
writing manifest file 'singa.egg-info/SOURCES.txt'
reading manifest file 'singa.egg-info/SOURCES.txt'
writing manifest file 'singa.egg-info/SOURCES.txt'
installing library code to build/bdist.linux-x86_64/egg
running install_lib
running build_py
creating build
creating build/lib
creating build/lib/rafiki
copying rafiki/agent.py -> build/lib/rafiki
copying rafiki/__init__.py -> build/lib/rafiki
creating build/lib/singa
copying singa/model.py -> build/lib/singa
copying singa/tensor.py -> build/lib/singa
copying singa/singa_wrap.py -> build/lib/singa
copying singa/image_tool.py -> build/lib/singa
copying singa/device.py -> build/lib/singa
copying singa/opt.py -> build/lib/singa
copying singa/__init__.py -> build/lib/singa
copying singa/sonnx.py -> build/lib/singa
copying singa/net.py -> build/lib/singa
copying singa/autograd.py -> build/lib/singa
copying singa/metric.py -> build/lib/singa
copying singa/layer.py -> build/lib/singa
copying singa/optimizer.py -> build/lib/singa
copying singa/utils.py -> build/lib/singa
copying singa/data.py -> build/lib/singa
copying singa/converter.py -> build/lib/singa
copying singa/loss.py -> build/lib/singa
copying singa/snapshot.py -> build/lib/singa
copying singa/initializer.py -> build/lib/singa
creating build/lib/singa/proto
copying singa/proto/core_pb2.py -> build/lib/singa/proto
copying singa/proto/caffe_pb2.py -> build/lib/singa/proto
copying singa/proto/__init__.py -> build/lib/singa/proto
copying singa/proto/model_pb2.py -> build/lib/singa/proto
copying singa/proto/io_pb2.py -> build/lib/singa/proto
copying singa/_singa_wrap.so -> build/lib/singa
creating build/bdist.linux-x86_64
creating build/bdist.linux-x86_64/egg
creating build/bdist.linux-x86_64/egg/singa
copying build/lib/singa/model.py -> build/bdist.linux-x86_64/egg/singa
copying build/lib/singa/tensor.py -> build/bdist.linux-x86_64/egg/singa
copying build/lib/singa/singa_wrap.py -> build/bdist.linux-x86_64/egg/singa
copying build/lib/singa/image_tool.py -> build/bdist.linux-x86_64/egg/singa
copying build/lib/singa/device.py -> build/bdist.linux-x86_64/egg/singa
copying build/lib/singa/_singa_wrap.so -> build/bdist.linux-x86_64/egg/singa
copying build/lib/singa/opt.py -> build/bdist.linux-x86_64/egg/singa
copying build/lib/singa/__init__.py -> build/bdist.linux-x86_64/egg/singa
copying build/lib/singa/sonnx.py -> build/bdist.linux-x86_64/egg/singa
copying build/lib/singa/net.py -> build/bdist.linux-x86_64/egg/singa
copying build/lib/singa/autograd.py -> build/bdist.linux-x86_64/egg/singa
copying build/lib/singa/metric.py -> build/bdist.linux-x86_64/egg/singa
copying build/lib/singa/layer.py -> build/bdist.linux-x86_64/egg/singa
copying build/lib/singa/optimizer.py -> build/bdist.linux-x86_64/egg/singa
copying build/lib/singa/utils.py -> build/bdist.linux-x86_64/egg/singa
copying build/lib/singa/data.py -> build/bdist.linux-x86_64/egg/singa
copying build/lib/singa/converter.py -> build/bdist.linux-x86_64/egg/singa
copying build/lib/singa/loss.py -> build/bdist.linux-x86_64/egg/singa
copying build/lib/singa/snapshot.py -> build/bdist.linux-x86_64/egg/singa
creating build/bdist.linux-x86_64/egg/singa/proto
copying build/lib/singa/proto/core_pb2.py -> build/bdist.linux-x86_64/egg/singa/proto
copying build/lib/singa/proto/caffe_pb2.py -> build/bdist.linux-x86_64/egg/singa/proto
copying build/lib/singa/proto/__init__.py -> build/bdist.linux-x86_64/egg/singa/proto
copying build/lib/singa/proto/model_pb2.py -> build/bdist.linux-x86_64/egg/singa/proto
copying build/lib/singa/proto/io_pb2.py -> build/bdist.linux-x86_64/egg/singa/proto
copying build/lib/singa/initializer.py -> build/bdist.linux-x86_64/egg/singa
creating build/bdist.linux-x86_64/egg/rafiki
copying build/lib/rafiki/agent.py -> build/bdist.linux-x86_64/egg/rafiki
copying build/lib/rafiki/__init__.py -> build/bdist.linux-x86_64/egg/rafiki
byte-compiling build/bdist.linux-x86_64/egg/singa/model.py to model.cpython-36.pyc
byte-compiling build/bdist.linux-x86_64/egg/singa/tensor.py to tensor.cpython-36.pyc
byte-compiling build/bdist.linux-x86_64/egg/singa/singa_wrap.py to singa_wrap.cpython-36.pyc
byte-compiling build/bdist.linux-x86_64/egg/singa/image_tool.py to image_tool.cpython-36.pyc
byte-compiling build/bdist.linux-x86_64/egg/singa/device.py to device.cpython-36.pyc
byte-compiling build/bdist.linux-x86_64/egg/singa/opt.py to opt.cpython-36.pyc
byte-compiling build/bdist.linux-x86_64/egg/singa/__init__.py to __init__.cpython-36.pyc
byte-compiling build/bdist.linux-x86_64/egg/singa/sonnx.py to sonnx.cpython-36.pyc
byte-compiling build/bdist.linux-x86_64/egg/singa/net.py to net.cpython-36.pyc
byte-compiling build/bdist.linux-x86_64/egg/singa/autograd.py to autograd.cpython-36.pyc
byte-compiling build/bdist.linux-x86_64/egg/singa/metric.py to metric.cpython-36.pyc
byte-compiling build/bdist.linux-x86_64/egg/singa/layer.py to layer.cpython-36.pyc
byte-compiling build/bdist.linux-x86_64/egg/singa/optimizer.py to optimizer.cpython-36.pyc
byte-compiling build/bdist.linux-x86_64/egg/singa/utils.py to utils.cpython-36.pyc
byte-compiling build/bdist.linux-x86_64/egg/singa/data.py to data.cpython-36.pyc
byte-compiling build/bdist.linux-x86_64/egg/singa/converter.py to converter.cpython-36.pyc
byte-compiling build/bdist.linux-x86_64/egg/singa/loss.py to loss.cpython-36.pyc
byte-compiling build/bdist.linux-x86_64/egg/singa/snapshot.py to snapshot.cpython-36.pyc
byte-compiling build/bdist.linux-x86_64/egg/singa/proto/core_pb2.py to core_pb2.cpython-36.pyc
byte-compiling build/bdist.linux-x86_64/egg/singa/proto/caffe_pb2.py to caffe_pb2.cpython-36.pyc
byte-compiling build/bdist.linux-x86_64/egg/singa/proto/__init__.py to __init__.cpython-36.pyc
byte-compiling build/bdist.linux-x86_64/egg/singa/proto/model_pb2.py to model_pb2.cpython-36.pyc
byte-compiling build/bdist.linux-x86_64/egg/singa/proto/io_pb2.py to io_pb2.cpython-36.pyc
byte-compiling build/bdist.linux-x86_64/egg/singa/initializer.py to initializer.cpython-36.pyc
byte-compiling build/bdist.linux-x86_64/egg/rafiki/agent.py to agent.cpython-36.pyc
byte-compiling build/bdist.linux-x86_64/egg/rafiki/__init__.py to __init__.cpython-36.pyc
creating build/bdist.linux-x86_64/egg/EGG-INFO
copying singa.egg-info/PKG-INFO -> build/bdist.linux-x86_64/egg/EGG-INFO
copying singa.egg-info/SOURCES.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying singa.egg-info/dependency_links.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying singa.egg-info/entry_points.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying singa.egg-info/top_level.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
writing build/bdist.linux-x86_64/egg/EGG-INFO/native_libs.txt
zip_safe flag not set; analyzing archive contents...
singa.__pycache__.singa_wrap.cpython-36: module references __file__
creating dist
creating 'dist/singa-2.1.0-py3.6.egg' and adding 'build/bdist.linux-x86_64/egg' to it
removing 'build/bdist.linux-x86_64/egg' (and everything under it)
Processing singa-2.1.0-py3.6.egg
creating $PREFIX/lib/python3.6/site-packages/singa-2.1.0-py3.6.egg
Extracting singa-2.1.0-py3.6.egg to $PREFIX/lib/python3.6/site-packages
Adding singa 2.1.0 to easy-install.pth file
Installing singa script to $PREFIX/bin
Installed $PREFIX/lib/python3.6/site-packages/singa-2.1.0-py3.6.egg
Processing dependencies for singa==2.1.0
Finished processing dependencies for singa==2.1.0
Resource usage statistics from building singa:
Process count: 10
CPU time: Sys=0:00:07.3, User=0:02:26.8
Memory: 737.2M
Disk usage: 219.7K
Time elapsed: 0:04:07.6
Packaging singa
INFO:conda_build.build:Packaging singa
INFO conda_build.build:build(1571): Packaging singa
/root/miniconda/lib/python3.7/site-packages/conda_build/environ.py:427: UserWarning: The environment variable 'CUDA' is being passed through with value '10.0'. If you are splitting build and test phases with --no-test, please ensure that this value is also set similarly at test time.
UserWarning
Packaging singa-2.1.0.dev-cudnn7.3.1_cuda10.0_py36
INFO:conda_build.build:Packaging singa-2.1.0.dev-cudnn7.3.1_cuda10.0_py36
INFO conda_build.build:bundle_conda(891): Packaging singa-2.1.0.dev-cudnn7.3.1_cuda10.0_py36
compiling .pyc files...
found egg dir: /root/miniconda/conda-bld/singa_1583719327583/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl/lib/python3.6/site-packages/singa-2.1.0-py3.6.egg
number of files: 102
Warning: rpath /root/miniconda/conda-bld/singa_1583719327583/_build_env/lib is outside prefix /root/miniconda/conda-bld/singa_1583719327583/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl (removing it)
Warning: rpath /usr/local/cuda/lib64 is outside prefix /root/miniconda/conda-bld/singa_1583719327583/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl (removing it)
Warning: rpath /root/miniconda/conda-bld/singa_1583719327583/_build_env/lib is outside prefix /root/miniconda/conda-bld/singa_1583719327583/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl (removing it)
Warning: rpath /usr/local/cuda/lib64 is outside prefix /root/miniconda/conda-bld/singa_1583719327583/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl (removing it)
INFO (singa,lib/libsinga.so): Needed DSO x86_64-conda_cos6-linux-gnu/sysroot/lib/libm.so.6 found in CDT/compiler package defaults::gcc_impl_linux-64-5.4.0-habb00fd_3
WARNING (singa,lib/libsinga.so): Needed DSO lib/libcublas.so.10.0 found in ['cudatoolkit']
WARNING (singa,lib/libsinga.so): .. but ['cudatoolkit'] not in reqs/run, (i.e. it is overlinking) (likely) or a missing dependency (less likely)
INFO (singa,lib/libsinga.so): Needed DSO lib/libprotobuf.so.17 found in conda-forge::libprotobuf-3.6.1-hdbcaa40_1001
INFO (singa,lib/libsinga.so): Needed DSO x86_64-conda_cos6-linux-gnu/sysroot/lib/ld-linux-x86-64.so.2 found in CDT/compiler package defaults::gcc_impl_linux-64-5.4.0-habb00fd_3
INFO (singa,lib/libsinga.so): Needed DSO lib/libgcc_s.so.1 found in conda-forge::libgcc-ng-9.2.0-h24d8f2e_2
WARNING (singa,lib/libsinga.so): Needed DSO lib/libopenblas.so.0 found in ['openblas']
WARNING (singa,lib/libsinga.so): .. but ['openblas'] not in reqs/run, (i.e. it is overlinking) (likely) or a missing dependency (less likely)
INFO (singa,lib/libsinga.so): Needed DSO x86_64-conda_cos6-linux-gnu/sysroot/lib/libc.so.6 found in CDT/compiler package defaults::gcc_impl_linux-64-5.4.0-habb00fd_3
WARNING (singa,lib/libsinga.so): Needed DSO lib/libcurand.so.10.0 found in ['cudatoolkit']
WARNING (singa,lib/libsinga.so): .. but ['cudatoolkit'] not in reqs/run, (i.e. it is overlinking) (likely) or a missing dependency (less likely)
INFO (singa,lib/libsinga.so): Needed DSO lib/libstdc++.so.6 found in conda-forge::libstdcxx-ng-9.2.0-hdf63c60_2
INFO (singa,lib/libsinga.so): Needed DSO x86_64-conda_cos6-linux-gnu/sysroot/lib/libpthread.so.0 found in CDT/compiler package defaults::gcc_impl_linux-64-5.4.0-habb00fd_3
INFO (singa,lib/libsinga.so): Needed DSO lib/libglog.so.0 found in conda-forge::glog-0.3.5-hf484d3e_1001
WARNING (singa,lib/libsinga.so): Needed DSO lib/libcudart.so.10.0 found in ['cudatoolkit']
WARNING (singa,lib/libsinga.so): .. but ['cudatoolkit'] not in reqs/run, (i.e. it is overlinking) (likely) or a missing dependency (less likely)
INFO (singa,lib/libsinga.so): Needed DSO lib/libcudnn.so.7 found in defaults::cudnn-7.3.1-cuda10.0_0
INFO (singa,lib/python3.6/site-packages/singa/_singa_wrap.so): Needed DSO lib/libprotobuf.so.17 found in conda-forge::libprotobuf-3.6.1-hdbcaa40_1001
INFO (singa,lib/python3.6/site-packages/singa/_singa_wrap.so): Needed DSO x86_64-conda_cos6-linux-gnu/sysroot/lib/libm.so.6 found in CDT/compiler package defaults::gcc_impl_linux-64-5.4.0-habb00fd_3
WARNING (singa,lib/python3.6/site-packages/singa/_singa_wrap.so): Needed DSO lib/libcurand.so.10.0 found in ['cudatoolkit']
WARNING (singa,lib/python3.6/site-packages/singa/_singa_wrap.so): .. but ['cudatoolkit'] not in reqs/run, (i.e. it is overlinking) (likely) or a missing dependency (less likely)
WARNING (singa,lib/python3.6/site-packages/singa/_singa_wrap.so): Needed DSO lib/libcudart.so.10.0 found in ['cudatoolkit']
WARNING (singa,lib/python3.6/site-packages/singa/_singa_wrap.so): .. but ['cudatoolkit'] not in reqs/run, (i.e. it is overlinking) (likely) or a missing dependency (less likely)
WARNING (singa,lib/python3.6/site-packages/singa/_singa_wrap.so): Needed DSO lib/libcublas.so.10.0 found in ['cudatoolkit']
WARNING (singa,lib/python3.6/site-packages/singa/_singa_wrap.so): .. but ['cudatoolkit'] not in reqs/run, (i.e. it is overlinking) (likely) or a missing dependency (less likely)
INFO (singa,lib/python3.6/site-packages/singa/_singa_wrap.so): Needed DSO lib/libpython3.6m.so.1.0 found in conda-forge::python-3.6.10-h9d8adfe_1009_cpython
INFO (singa,lib/python3.6/site-packages/singa/_singa_wrap.so): Needed DSO lib/libglog.so.0 found in conda-forge::glog-0.3.5-hf484d3e_1001
INFO (singa,lib/python3.6/site-packages/singa/_singa_wrap.so): Needed DSO x86_64-conda_cos6-linux-gnu/sysroot/lib/ld-linux-x86-64.so.2 found in CDT/compiler package defaults::gcc_impl_linux-64-5.4.0-habb00fd_3
INFO (singa,lib/python3.6/site-packages/singa/_singa_wrap.so): Needed DSO lib/libgcc_s.so.1 found in conda-forge::libgcc-ng-9.2.0-h24d8f2e_2
INFO (singa,lib/python3.6/site-packages/singa/_singa_wrap.so): Needed DSO x86_64-conda_cos6-linux-gnu/sysroot/lib/libc.so.6 found in CDT/compiler package defaults::gcc_impl_linux-64-5.4.0-habb00fd_3
WARNING (singa,lib/python3.6/site-packages/singa/_singa_wrap.so): Needed DSO lib/libopenblas.so.0 found in ['openblas']
WARNING (singa,lib/python3.6/site-packages/singa/_singa_wrap.so): .. but ['openblas'] not in reqs/run, (i.e. it is overlinking) (likely) or a missing dependency (less likely)
INFO (singa,lib/python3.6/site-packages/singa/_singa_wrap.so): Needed DSO lib/libcudnn.so.7 found in defaults::cudnn-7.3.1-cuda10.0_0
INFO (singa,lib/python3.6/site-packages/singa/_singa_wrap.so): Needed DSO lib/libstdc++.so.6 found in conda-forge::libstdcxx-ng-9.2.0-hdf63c60_2
INFO (singa,lib/python3.6/site-packages/singa/_singa_wrap.so): Needed DSO x86_64-conda_cos6-linux-gnu/sysroot/lib/libpthread.so.0 found in CDT/compiler package defaults::gcc_impl_linux-64-5.4.0-habb00fd_3
WARNING (singa): dso library package defaults::mkl-dnn-0.14-h6bb024c_0 in requirements/run but it is not used (i.e. it is overdepending or perhaps statically linked? If that is what you want then add it to `build/ignore_run_exports`)
INFO (singa): plugin library package conda-forge::numpy-1.16.0-py36_blas_openblash1522bff_1000 in requirements/run but it is not used (i.e. it is overdepending or perhaps statically linked? If that is what you want then add it to `build/ignore_run_exports`)
Fixing permissions
Packaged license file/s.
Detected hard-coded path in text file bin/singa
Detected hard-coded path in binary file lib/libsinga.so
Detected hard-coded path in binary file lib/python3.6/site-packages/singa/_singa_wrap.so
Importing conda-verify failed. Please be sure to test your packages. conda install conda-verify to make this message go away.
WARNING:conda_build.build:Importing conda-verify failed. Please be sure to test your packages. conda install conda-verify to make this message go away.
WARNING conda_build.build:bundle_conda(1042): Importing conda-verify failed. Please be sure to test your packages. conda install conda-verify to make this message go away.
TEST START: /root/miniconda/conda-bld/linux-64/singa-2.1.0.dev-cudnn7.3.1_cuda10.0_py36.tar.bz2
Renaming work directory, /root/miniconda/conda-bld/singa_1583719327583/work to /root/miniconda/conda-bld/singa_1583719327583/work_moved_singa-2.1.0.dev-cudnn7.3.1_cuda10.0_py36_linux-64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
## Package Plan ##
environment location: /root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho
The following NEW packages will be INSTALLED:
_libgcc_mutex: 0.1-conda_forge conda-forge
_openmp_mutex: 4.5-1_llvm conda-forge
ca-certificates: 2019.11.28-hecc5488_0 conda-forge
certifi: 2019.11.28-py36_0 conda-forge
cudatoolkit: 10.0.130-0
cudnn: 7.3.1-cuda10.0_0
freetype: 2.10.0-he983fc9_1 conda-forge
future: 0.18.2-py36_0 conda-forge
glog: 0.3.5-hf484d3e_1001 conda-forge
intel-openmp: 2018.0.3-0
jpeg: 9c-h14c3975_1001 conda-forge
ld_impl_linux-64: 2.33.1-h53a641e_8 conda-forge
libblas: 3.8.0-15_mkl conda-forge
libcblas: 3.8.0-15_mkl conda-forge
libffi: 3.2.1-he1b5a44_1006 conda-forge
libgcc-ng: 9.2.0-h24d8f2e_2 conda-forge
libgfortran-ng: 7.3.0-hdf63c60_5 conda-forge
liblapack: 3.8.0-15_mkl conda-forge
libmklml: 2018.0.3-0
libopenblas: 0.3.3-h5a2b251_3
libpng: 1.6.37-hed695b0_0 conda-forge
libprotobuf: 3.6.1-hdbcaa40_1001 conda-forge
libstdcxx-ng: 9.2.0-hdf63c60_2 conda-forge
libtiff: 4.1.0-hc3755c2_3 conda-forge
llvm-openmp: 9.0.1-hc9558a2_2 conda-forge
lz4-c: 1.8.3-he1b5a44_1001 conda-forge
mkl: 2020.0-166 conda-forge
mkl-dnn: 0.14-h6bb024c_0
ncurses: 6.1-hf484d3e_1002 conda-forge
numpy: 1.16.5-py36h95a1406_0 conda-forge
olefile: 0.46-py_0 conda-forge
onnx: 1.6.0-py36he1b5a44_0 conda-forge
openssl: 1.1.1d-h516909a_0 conda-forge
pillow: 7.0.0-py36hefe7db6_0 conda-forge
pip: 20.0.2-py_2 conda-forge
protobuf: 3.6.1-py36hf484d3e_1001 conda-forge
python: 3.6.10-h9d8adfe_1009_cpython conda-forge
python_abi: 3.6-1_cp36m conda-forge
readline: 8.0-hf8c457e_0 conda-forge
setuptools: 46.0.0-py36_0 conda-forge
singa: 2.1.0.dev-cudnn7.3.1_cuda10.0_py36 local
six: 1.14.0-py36_0 conda-forge
sqlite: 3.30.1-hcee41ef_0 conda-forge
tk: 8.6.10-hed695b0_0 conda-forge
tqdm: 4.43.0-py_0 conda-forge
wheel: 0.34.2-py_1 conda-forge
xz: 5.2.4-h14c3975_1001 conda-forge
zlib: 1.2.11-h516909a_1006 conda-forge
zstd: 1.4.4-h3b9ef0a_1 conda-forge
Preparing transaction: ...working... done
Verifying transaction: ...working...
ClobberWarning: This transaction has incompatible packages due to a shared path.
packages: defaults/linux-64::intel-openmp-2018.0.3-0, conda-forge/linux-64::llvm-openmp-9.0.1-hc9558a2_2
path: 'lib/libiomp5.so'
ClobberWarning: This transaction has incompatible packages due to a shared path.
packages: conda-forge/linux-64::libblas-3.8.0-15_mkl, defaults/linux-64::libopenblas-0.3.3-h5a2b251_3
path: 'lib/libblas.so'
ClobberWarning: This transaction has incompatible packages due to a shared path.
packages: defaults/linux-64::libopenblas-0.3.3-h5a2b251_3, conda-forge/linux-64::libcblas-3.8.0-15_mkl
path: 'lib/libcblas.so'
ClobberWarning: This transaction has incompatible packages due to a shared path.
packages: defaults/linux-64::libopenblas-0.3.3-h5a2b251_3, conda-forge/linux-64::liblapack-3.8.0-15_mkl
path: 'lib/liblapack.so'
done
Executing transaction: ...working...
ClobberWarning: Conda was asked to clobber an existing path.
source path: /root/miniconda/pkgs/llvm-openmp-9.0.1-hc9558a2_2/lib/libiomp5.so
target path: /root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/libiomp5.so
ClobberWarning: Conda was asked to clobber an existing path.
source path: /root/miniconda/pkgs/libopenblas-0.3.3-h5a2b251_3/lib/libblas.so
target path: /root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/libblas.so
ClobberWarning: Conda was asked to clobber an existing path.
source path: /root/miniconda/pkgs/libcblas-3.8.0-15_mkl/lib/libcblas.so
target path: /root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/libcblas.so
ClobberWarning: Conda was asked to clobber an existing path.
source path: /root/miniconda/pkgs/liblapack-3.8.0-15_mkl/lib/liblapack.so
target path: /root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/liblapack.so
done
export PREFIX=/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho
export SRC_DIR=/root/miniconda/conda-bld/singa_1583719327583/test_tmp
+ cd test/python
+ python run.py
EEEEEFEEEEEEE
======================================================================
ERROR: test_api (unittest.loader._FailedTest)
----------------------------------------------------------------------
ImportError: Failed to import test module: test_api
Traceback (most recent call last):
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/unittest/loader.py", line 428, in _find_test_path
module = self._get_module_from_name(name)
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/unittest/loader.py", line 369, in _get_module_from_name
__import__(name)
File "/root/miniconda/conda-bld/singa_1583719327583/test_tmp/test/python/test_api.py", line 27, in <module>
from singa import tensor
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/site-packages/singa/tensor.py", line 58, in <module>
from deprecated import deprecated
ModuleNotFoundError: No module named 'deprecated'
======================================================================
ERROR: test_layer (unittest.loader._FailedTest)
----------------------------------------------------------------------
ImportError: Failed to import test module: test_layer
Traceback (most recent call last):
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/unittest/loader.py", line 428, in _find_test_path
module = self._get_module_from_name(name)
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/unittest/loader.py", line 369, in _get_module_from_name
__import__(name)
File "/root/miniconda/conda-bld/singa_1583719327583/test_tmp/test/python/test_layer.py", line 24, in <module>
from singa import layer
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/site-packages/singa/layer.py", line 57, in <module>
from . import tensor
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/site-packages/singa/tensor.py", line 58, in <module>
from deprecated import deprecated
ModuleNotFoundError: No module named 'deprecated'
======================================================================
ERROR: test_loss (unittest.loader._FailedTest)
----------------------------------------------------------------------
ImportError: Failed to import test module: test_loss
Traceback (most recent call last):
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/unittest/loader.py", line 428, in _find_test_path
module = self._get_module_from_name(name)
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/unittest/loader.py", line 369, in _get_module_from_name
__import__(name)
File "/root/miniconda/conda-bld/singa_1583719327583/test_tmp/test/python/test_loss.py", line 23, in <module>
from singa import loss
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/site-packages/singa/loss.py", line 43, in <module>
from . import tensor
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/site-packages/singa/tensor.py", line 58, in <module>
from deprecated import deprecated
ModuleNotFoundError: No module named 'deprecated'
======================================================================
ERROR: test_metric (unittest.loader._FailedTest)
----------------------------------------------------------------------
ImportError: Failed to import test module: test_metric
Traceback (most recent call last):
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/unittest/loader.py", line 428, in _find_test_path
module = self._get_module_from_name(name)
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/unittest/loader.py", line 369, in _get_module_from_name
__import__(name)
File "/root/miniconda/conda-bld/singa_1583719327583/test_tmp/test/python/test_metric.py", line 23, in <module>
from singa import metric
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/site-packages/singa/metric.py", line 45, in <module>
from . import tensor
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/site-packages/singa/tensor.py", line 58, in <module>
from deprecated import deprecated
ModuleNotFoundError: No module named 'deprecated'
======================================================================
ERROR: test_batch_norm (test_mkldnn.TestPythonOperation)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/miniconda/conda-bld/singa_1583719327583/test_tmp/test/python/test_mkldnn.py", line 150, in test_batch_norm
y = singa_wrap.CpuBatchNormForwardInference(handle, x, scale, bias,
AttributeError: module 'singa.singa_wrap' has no attribute 'CpuBatchNormForwardInference'
======================================================================
ERROR: test_pooling (test_mkldnn.TestPythonOperation)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/miniconda/conda-bld/singa_1583719327583/test_tmp/test/python/test_mkldnn.py", line 112, in test_pooling
y = singa_wrap.CpuPoolingForward(handle, x)
AttributeError: module 'singa.singa_wrap' has no attribute 'CpuPoolingForward'
======================================================================
ERROR: test_net (unittest.loader._FailedTest)
----------------------------------------------------------------------
ImportError: Failed to import test module: test_net
Traceback (most recent call last):
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/unittest/loader.py", line 428, in _find_test_path
module = self._get_module_from_name(name)
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/unittest/loader.py", line 369, in _get_module_from_name
__import__(name)
File "/root/miniconda/conda-bld/singa_1583719327583/test_tmp/test/python/test_net.py", line 25, in <module>
from singa import net
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/site-packages/singa/net.py", line 68, in <module>
from . import tensor
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/site-packages/singa/tensor.py", line 58, in <module>
from deprecated import deprecated
ModuleNotFoundError: No module named 'deprecated'
======================================================================
ERROR: test_onnx (unittest.loader._FailedTest)
----------------------------------------------------------------------
ImportError: Failed to import test module: test_onnx
Traceback (most recent call last):
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/unittest/loader.py", line 428, in _find_test_path
module = self._get_module_from_name(name)
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/unittest/loader.py", line 369, in _get_module_from_name
__import__(name)
File "/root/miniconda/conda-bld/singa_1583719327583/test_tmp/test/python/test_onnx.py", line 21, in <module>
from singa import tensor
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/site-packages/singa/tensor.py", line 58, in <module>
from deprecated import deprecated
ModuleNotFoundError: No module named 'deprecated'
======================================================================
ERROR: test_onnx_backend (unittest.loader._FailedTest)
----------------------------------------------------------------------
ImportError: Failed to import test module: test_onnx_backend
Traceback (most recent call last):
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/unittest/loader.py", line 428, in _find_test_path
module = self._get_module_from_name(name)
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/unittest/loader.py", line 369, in _get_module_from_name
__import__(name)
File "/root/miniconda/conda-bld/singa_1583719327583/test_tmp/test/python/test_onnx_backend.py", line 21, in <module>
from singa import tensor
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/site-packages/singa/tensor.py", line 58, in <module>
from deprecated import deprecated
ModuleNotFoundError: No module named 'deprecated'
======================================================================
ERROR: test_operation (unittest.loader._FailedTest)
----------------------------------------------------------------------
ImportError: Failed to import test module: test_operation
Traceback (most recent call last):
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/unittest/loader.py", line 428, in _find_test_path
module = self._get_module_from_name(name)
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/unittest/loader.py", line 369, in _get_module_from_name
__import__(name)
File "/root/miniconda/conda-bld/singa_1583719327583/test_tmp/test/python/test_operation.py", line 21, in <module>
from singa import tensor
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/site-packages/singa/tensor.py", line 58, in <module>
from deprecated import deprecated
ModuleNotFoundError: No module named 'deprecated'
======================================================================
ERROR: test_optimizer (unittest.loader._FailedTest)
----------------------------------------------------------------------
ImportError: Failed to import test module: test_optimizer
Traceback (most recent call last):
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/unittest/loader.py", line 428, in _find_test_path
module = self._get_module_from_name(name)
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/unittest/loader.py", line 369, in _get_module_from_name
__import__(name)
File "/root/miniconda/conda-bld/singa_1583719327583/test_tmp/test/python/test_optimizer.py", line 27, in <module>
import singa.tensor as tensor
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/site-packages/singa/tensor.py", line 58, in <module>
from deprecated import deprecated
ModuleNotFoundError: No module named 'deprecated'
======================================================================
ERROR: test_tensor (unittest.loader._FailedTest)
----------------------------------------------------------------------
ImportError: Failed to import test module: test_tensor
Traceback (most recent call last):
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/unittest/loader.py", line 428, in _find_test_path
module = self._get_module_from_name(name)
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/unittest/loader.py", line 369, in _get_module_from_name
__import__(name)
File "/root/miniconda/conda-bld/singa_1583719327583/test_tmp/test/python/test_tensor.py", line 25, in <module>
from singa import tensor
File "/root/miniconda/conda-bld/singa_1583719327583/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.6/site-packages/singa/tensor.py", line 58, in <module>
from deprecated import deprecated
ModuleNotFoundError: No module named 'deprecated'
======================================================================
FAIL: test_conv2d (test_mkldnn.TestPythonOperation)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/miniconda/conda-bld/singa_1583719327583/test_tmp/test/python/test_mkldnn.py", line 78, in test_conv2d
self.assertAlmostEqual(4.0, _dW[0], places=5)
AssertionError: 4.0 != 0.040000003 within 5 places
----------------------------------------------------------------------
Ran 13 tests in 0.002s
FAILED (failures=1, errors=12)
TEST CONV2D FORWARD
TEST CONV2D DATA BACKWARD
TEST CONV2D WEIGHT BACKWARD
+ exit 0
Resource usage statistics from testing singa:
Process count: 1
CPU time: Sys=0:00:00.0, User=0:00:00.0
Memory: 2.7M
Disk usage: 584B
Time elapsed: 0:00:02.1
TEST END: /root/miniconda/conda-bld/linux-64/singa-2.1.0.dev-cudnn7.3.1_cuda10.0_py36.tar.bz2
Renaming work directory, /root/miniconda/conda-bld/singa_1583719327583/work to /root/miniconda/conda-bld/singa_1583719327583/work_moved_singa-2.1.0.dev-cudnn7.3.1_cuda10.0_py36_linux-64_main_build_loop
# Automatic uploading is disabled
# If you want to upload package(s) to anaconda.org later, type:
anaconda upload /root/miniconda/conda-bld/linux-64/singa-2.1.0.dev-cudnn7.3.1_cuda10.0_py36.tar.bz2
# To have conda build upload to anaconda.org automatically, use
# $ conda config --set anaconda_upload yes
anaconda_upload is not set. Not uploading wheels: []
####################################################################################
Resource usage summary:
Total time: 0:08:01.5
CPU usage: sys=0:00:07.3, user=0:02:26.8
Maximum memory usage observed: 737.2M
Total disk usage observed (not including envs): 220.2K
####################################################################################
Source and build intermediates have been left in /root/miniconda/conda-bld.
There are currently 3 accumulated.
To remove them, you can run the ```conda build purge``` command
root@3c17fd6cb72e:~/dcsysh/singa/tool/conda/singa# cd /root/miniconda/conda-bld/linux-64/
root@3c17fd6cb72e:~/miniconda/conda-bld/linux-64# ls
current_repodata.json index.html repodata.json.bz2 repodata_from_packages.json.bz2
current_repodata.json.bz2 repodata.json repodata_from_packages.json singa-2.1.0.dev-cudnn7.3.1_cuda10.0_py36.tar.bz2
```
----------------------------------------------------------------
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[GitHub] [singa] chrishkchris commented on issue #623: Some consultations
using the conda build in singa/tool/conda/singa
Posted by GitBox <gi...@apache.org>.
chrishkchris commented on issue #623: Some consultations using the conda build in singa/tool/conda/singa
URL: https://github.com/apache/singa/issues/623#issuecomment-596175237
@nudles ok, thanks a lot!
> you may need to add the conda-forge channel manually in the build command
> conda-build -c conda-forge ...
> This is because the onnx package is in the conda-forge channel, which is not the default channel.
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[GitHub] [singa] nudles edited a comment on issue #623: Some consultations
using the conda build in singa/tool/conda/singa
Posted by GitBox <gi...@apache.org>.
nudles edited a comment on issue #623: Some consultations using the conda build in singa/tool/conda/singa
URL: https://github.com/apache/singa/issues/623#issuecomment-596174104
you may need to add the conda-forge channel manually in the build command
`conda-build -c conda-forge ...`
This is because the onnx package is in the conda-forge channel, which is not the default channel.
----------------------------------------------------------------
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[GitHub] [singa] chrishkchris commented on issue #623: Some consultations
using the conda build in singa/tool/conda/singa
Posted by GitBox <gi...@apache.org>.
chrishkchris commented on issue #623: Some consultations using the conda build in singa/tool/conda/singa
URL: https://github.com/apache/singa/issues/623#issuecomment-596299226
I will remove the build folder manually and try again
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[GitHub] [singa] chrishkchris commented on issue #623: Some consultations
using the conda build in singa/tool/conda/singa
Posted by GitBox <gi...@apache.org>.
chrishkchris commented on issue #623: Some consultations using the conda build in singa/tool/conda/singa
URL: https://github.com/apache/singa/issues/623#issuecomment-596209082
Sorry, I cannot understand the error due to build lock, the problem also exists after upgrading conda-build
```
dcsysh@panda:~/singa/tool/conda/singa$ conda-build -c conda-forge . --python 3.6
No numpy version specified in conda_build_config.yaml. Falling back to default numpy value of 1.11
WARNING:conda_build.metadata:No numpy version specified in conda_build_config.yaml. Falling back to default numpy value of 1.11
Copying /home/dcsysh/singa to /home/dcsysh/anaconda3/conda-bld/singa_1583660203405/work/
Traceback (most recent call last):
File "/home/dcsysh/anaconda3/bin/conda-build", line 11, in <module>
sys.exit(main())
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda_build/cli/main_build.py", line 469, in main
execute(sys.argv[1:])
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda_build/cli/main_build.py", line 460, in execute
verify=args.verify, variants=args.variants)
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda_build/api.py", line 209, in build
notest=notest, need_source_download=need_source_download, variants=variants)
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda_build/build.py", line 2322, in build_tree
bypass_env_check=True)
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda_build/render.py", line 802, in render_recipe
try_download(m, no_download_source=no_download_source)
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda_build/render.py", line 628, in try_download
source.provide(metadata)
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda_build/source.py", line 691, in provide
locking=metadata.config.locking, clobber=True)
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda_build/utils.py", line 551, in copy_into
merge_tree(src, dst, symlinks, timeout=timeout, lock=lock, locking=locking, clobber=clobber)
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda_build/utils.py", line 668, in merge_tree
with try_acquire_locks(locks, timeout):
File "/home/dcsysh/anaconda3/lib/python3.6/contextlib.py", line 81, in __enter__
return next(self.gen)
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda_build/utils.py", line 491, in try_acquire_locks
raise BuildLockError('Failed to acquire all locks')
conda_build.exceptions.BuildLockError: Failed to acquire all locks
```
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[GitHub] [singa] chrishkchris removed a comment on issue #623: Some
consultations using the conda build in singa/tool/conda/singa
Posted by GitBox <gi...@apache.org>.
chrishkchris removed a comment on issue #623: Some consultations using the conda build in singa/tool/conda/singa
URL: https://github.com/apache/singa/issues/623#issuecomment-596299226
I will remove the build folder manually and try again
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[GitHub] [singa] chrishkchris closed issue #623: Some consultations using
the conda build in singa/tool/conda/singa
Posted by GitBox <gi...@apache.org>.
chrishkchris closed issue #623: Some consultations using the conda build in singa/tool/conda/singa
URL: https://github.com/apache/singa/issues/623
----------------------------------------------------------------
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[GitHub] [singa] chrishkchris removed a comment on issue #623: Some
consultations using the conda build in singa/tool/conda/singa
Posted by GitBox <gi...@apache.org>.
chrishkchris removed a comment on issue #623: Some consultations using the conda build in singa/tool/conda/singa
URL: https://github.com/apache/singa/issues/623#issuecomment-596209082
Sorry, I cannot understand the error due to build lock, the problem also exists after upgrading conda-build
```
dcsysh@panda:~/singa/tool/conda/singa$ conda-build -c conda-forge . --python 3.6
No numpy version specified in conda_build_config.yaml. Falling back to default numpy value of 1.11
WARNING:conda_build.metadata:No numpy version specified in conda_build_config.yaml. Falling back to default numpy value of 1.11
Copying /home/dcsysh/singa to /home/dcsysh/anaconda3/conda-bld/singa_1583660203405/work/
Traceback (most recent call last):
File "/home/dcsysh/anaconda3/bin/conda-build", line 11, in <module>
sys.exit(main())
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda_build/cli/main_build.py", line 469, in main
execute(sys.argv[1:])
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda_build/cli/main_build.py", line 460, in execute
verify=args.verify, variants=args.variants)
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda_build/api.py", line 209, in build
notest=notest, need_source_download=need_source_download, variants=variants)
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda_build/build.py", line 2322, in build_tree
bypass_env_check=True)
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda_build/render.py", line 802, in render_recipe
try_download(m, no_download_source=no_download_source)
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda_build/render.py", line 628, in try_download
source.provide(metadata)
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda_build/source.py", line 691, in provide
locking=metadata.config.locking, clobber=True)
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda_build/utils.py", line 551, in copy_into
merge_tree(src, dst, symlinks, timeout=timeout, lock=lock, locking=locking, clobber=clobber)
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda_build/utils.py", line 668, in merge_tree
with try_acquire_locks(locks, timeout):
File "/home/dcsysh/anaconda3/lib/python3.6/contextlib.py", line 81, in __enter__
return next(self.gen)
File "/home/dcsysh/anaconda3/lib/python3.6/site-packages/conda_build/utils.py", line 491, in try_acquire_locks
raise BuildLockError('Failed to acquire all locks')
conda_build.exceptions.BuildLockError: Failed to acquire all locks
```
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[GitHub] [singa] chrishkchris removed a comment on issue #623: Some
consultations using the conda build in singa/tool/conda/singa
Posted by GitBox <gi...@apache.org>.
chrishkchris removed a comment on issue #623: Some consultations using the conda build in singa/tool/conda/singa
URL: https://github.com/apache/singa/issues/623#issuecomment-596298562
Sorry, I tried my anaconda environment is not okay, and then tried the docker environment in https://github.com/apache/singa/blob/master/tool/conda/docker/cuda10/Dockerfile is still not ok
The error message is:
```
root@3c17fd6cb72e:~/dcsysh/singa/tool/conda/singa# export CUDA=10.0
root@3c17fd6cb72e:~/dcsysh/singa/tool/conda/singa# conda-build -c conda-forge . --python 3.6
No numpy version specified in conda_build_config.yaml. Falling back to default numpy value of 1.11
WARNING:conda_build.metadata:No numpy version specified in conda_build_config.yaml. Falling back to default numpy value of 1.11
Copying /root/dcsysh/singa to /root/miniconda/conda-bld/singa_1583682553831/work/
Adding in variants from internal_defaults
INFO:conda_build.variants:Adding in variants from internal_defaults
Adding in variants from /root/dcsysh/singa/tool/conda/singa/conda_build_config.yaml
INFO:conda_build.variants:Adding in variants from /root/dcsysh/singa/tool/conda/singa/conda_build_config.yaml
Adding in variants from config.variant
INFO:conda_build.variants:Adding in variants from config.variant
/root/miniconda/lib/python3.7/site-packages/conda_build/environ.py:427: UserWarning: The environment variable 'CUDA' is being passed through with value '10.0'. If you are splitting build and test phases with --no-test, please ensure that this value is also set similarly at test time.
UserWarning
Attempting to finalize metadata for singa
INFO:conda_build.metadata:Attempting to finalize metadata for singa
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
Adding .* to spec 'libopenblas 0.3.3' to ensure satisfiability. Please consider putting {{ var_name }}.* or some relational operator (>/</>=/<=) on this spec in meta.yaml, or if req is also a build req, using {{ pin_compatible() }} jinja2 function instead. See https://conda.io/docs/user-guide/tasks/build-packages/variants.html#pinning-at-the-variant-level
WARNING:conda_build.utils:Adding .* to spec 'libopenblas 0.3.3' to ensure satisfiability. Please consider putting {{ var_name }}.* or some relational operator (>/</>=/<=) on this spec in meta.yaml, or if req is also a build req, using {{ pin_compatible() }} jinja2 function instead. See https://conda.io/docs/user-guide/tasks/build-packages/variants.html#pinning-at-the-variant-level
WARNING conda_build.utils:ensure_valid_spec(1749): Adding .* to spec 'libopenblas 0.3.3' to ensure satisfiability. Please consider putting {{ var_name }}.* or some relational operator (>/</>=/<=) on this spec in meta.yaml, or if req is also a build req, using {{ pin_compatible() }} jinja2 function instead. See https://conda.io/docs/user-guide/tasks/build-packages/variants.html#pinning-at-the-variant-level
Adding .* to spec 'libprotobuf 3.6.1' to ensure satisfiability. Please consider putting {{ var_name }}.* or some relational operator (>/</>=/<=) on this spec in meta.yaml, or if req is also a build req, using {{ pin_compatible() }} jinja2 function instead. See https://conda.io/docs/user-guide/tasks/build-packages/variants.html#pinning-at-the-variant-level
WARNING:conda_build.utils:Adding .* to spec 'libprotobuf 3.6.1' to ensure satisfiability. Please consider putting {{ var_name }}.* or some relational operator (>/</>=/<=) on this spec in meta.yaml, or if req is also a build req, using {{ pin_compatible() }} jinja2 function instead. See https://conda.io/docs/user-guide/tasks/build-packages/variants.html#pinning-at-the-variant-level
WARNING conda_build.utils:ensure_valid_spec(1749): Adding .* to spec 'libprotobuf 3.6.1' to ensure satisfiability. Please consider putting {{ var_name }}.* or some relational operator (>/</>=/<=) on this spec in meta.yaml, or if req is also a build req, using {{ pin_compatible() }} jinja2 function instead. See https://conda.io/docs/user-guide/tasks/build-packages/variants.html#pinning-at-the-variant-level
BUILD START: ['singa-2.1.0.dev-cudnn7.3.1_cuda10.0_py36.tar.bz2']
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
## Package Plan ##
environment location: /root/miniconda/conda-bld/singa_1583682553831/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl
The following NEW packages will be INSTALLED:
_libgcc_mutex: 0.1-conda_forge conda-forge
_openmp_mutex: 4.5-0_gnu conda-forge
blas: 1.1-openblas conda-forge
ca-certificates: 2019.11.28-hecc5488_0 conda-forge
certifi: 2019.11.28-py36_0 conda-forge
cudatoolkit: 10.0.130-0
cudnn: 7.3.1-cuda10.0_0
glog: 0.3.5-hf484d3e_1001 conda-forge
intel-openmp: 2018.0.3-0
ld_impl_linux-64: 2.33.1-h53a641e_8 conda-forge
libffi: 3.2.1-he1b5a44_1006 conda-forge
libgcc-ng: 9.2.0-h24d8f2e_2 conda-forge
libgfortran-ng: 7.3.0-hdf63c60_5 conda-forge
libgomp: 9.2.0-h24d8f2e_2 conda-forge
libmklml: 2018.0.3-0
libprotobuf: 3.6.1-hdbcaa40_1001 conda-forge
libstdcxx-ng: 9.2.0-hdf63c60_2 conda-forge
mkl-dnn: 0.14-h6bb024c_0
ncurses: 6.1-hf484d3e_1002 conda-forge
numpy: 1.16.0-py36_blas_openblash1522bff_1000 conda-forge [blas_openblas]
openblas: 0.3.3-h9ac9557_1001 conda-forge
openssl: 1.1.1d-h516909a_0 conda-forge
pcre: 8.44-he1b5a44_0 conda-forge
pip: 20.0.2-py_2 conda-forge
protobuf: 3.6.1-py36hf484d3e_1001 conda-forge
python: 3.6.10-h9d8adfe_1009_cpython conda-forge
python_abi: 3.6-1_cp36m conda-forge
readline: 8.0-hf8c457e_0 conda-forge
setuptools: 45.3.0-py36_0 conda-forge
six: 1.14.0-py36_0 conda-forge
sqlite: 3.30.1-hcee41ef_0 conda-forge
swig: 3.0.12-hf484d3e_1003 conda-forge
tk: 8.6.10-hed695b0_0 conda-forge
wheel: 0.34.2-py_1 conda-forge
xz: 5.2.4-h14c3975_1001 conda-forge
zlib: 1.2.11-h516909a_1006 conda-forge
Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
## Package Plan ##
environment location: /root/miniconda/conda-bld/singa_1583682553831/_build_env
The following NEW packages will be INSTALLED:
_libgcc_mutex: 0.1-conda_forge conda-forge
_openmp_mutex: 4.5-0_gnu conda-forge
binutils_impl_linux-64: 2.28.1-had2808c_3
binutils_linux-64: 5.4.0-had2808c_24
bzip2: 1.0.8-h516909a_2 conda-forge
ca-certificates: 2019.11.28-hecc5488_0 conda-forge
cmake: 3.16.4-h28c56e5_0 conda-forge
expat: 2.2.9-he1b5a44_2 conda-forge
gcc_impl_linux-64: 5.4.0-habb00fd_3
gcc_linux-64: 5.4.0-h98af8de_24
gxx_impl_linux-64: 5.4.0-hdf63c60_3
gxx_linux-64: 5.4.0-h98af8de_24
krb5: 1.16.4-h2fd8d38_0 conda-forge
libcurl: 7.68.0-hda55be3_0 conda-forge
libedit: 3.1.20170329-hf8c457e_1001 conda-forge
libgcc-ng: 9.2.0-h24d8f2e_2 conda-forge
libgomp: 9.2.0-h24d8f2e_2 conda-forge
libssh2: 1.8.2-h22169c7_2 conda-forge
libstdcxx-ng: 9.2.0-hdf63c60_2 conda-forge
libuv: 1.34.0-h516909a_0 conda-forge
make: 4.3-h516909a_0 conda-forge
ncurses: 6.1-hf484d3e_1002 conda-forge
openssl: 1.1.1d-h516909a_0 conda-forge
rhash: 1.3.6-h14c3975_1001 conda-forge
tk: 8.6.10-hed695b0_0 conda-forge
xz: 5.2.4-h14c3975_1001 conda-forge
zlib: 1.2.11-h516909a_1006 conda-forge
Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
source tree in: /root/miniconda/conda-bld/singa_1583682553831/work
export PREFIX=/root/miniconda/conda-bld/singa_1583682553831/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl
export BUILD_PREFIX=/root/miniconda/conda-bld/singa_1583682553831/_build_env
export SRC_DIR=/root/miniconda/conda-bld/singa_1583682553831/work
INFO: activate-binutils_linux-64.sh made the following environmental changes:
+ADDR2LINE=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-addr2line
+AR=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-ar
+AS=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-as
+CXXFILT=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-c++filt
+ELFEDIT=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-elfedit
+GPROF=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-gprof
+HOST=x86_64-conda_cos6-linux-gnu
+LD=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-ld
+LD_GOLD=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-ld.gold
+NM=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-nm
+OBJCOPY=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-objcopy
+OBJDUMP=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-objdump
+RANLIB=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-ranlib
+READELF=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-readelf
+SIZE=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-size
+STRINGS=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-strings
+STRIP=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-strip
INFO: activate-gcc_linux-64.sh made the following environmental changes:
+CC=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-cc
+CFLAGS=-march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -O2 -pipe -I$PREFIX/include -fdebug-prefix-map=${SRC_DIR}=/usr/local/src/conda/${PKG_NAME}-${PKG_VERSION} -fdebug-prefix-map=${PREFIX}=/usr/local/src/conda-prefix
+CPP=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-cpp
+CPPFLAGS=-DNDEBUG -D_FORTIFY_SOURCE=2 -O2
+DEBUG_CFLAGS=-march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-all -Og -g -Wall -Wextra -fvar-tracking-assignments -pipe -I$PREFIX/include -fdebug-prefix-map=${SRC_DIR}=/usr/local/src/conda/${PKG_NAME}-${PKG_VERSION} -fdebug-prefix-map=${PREFIX}=/usr/local/src/conda-prefix
+DEBUG_CPPFLAGS=-D_DEBUG -D_FORTIFY_SOURCE=2 -Og
+GCC=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-gcc
+GCC_AR=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-gcc-ar
+GCC_NM=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-gcc-nm
+GCC_RANLIB=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-gcc-ranlib
+LDFLAGS=-Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-rpath,$PREFIX/lib -L$PREFIX/lib
+_PYTHON_SYSCONFIGDATA_NAME=_sysconfigdata_x86_64_conda_cos6_linux_gnu
INFO: activate-gxx_linux-64.sh made the following environmental changes:
+CXX=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-c++
+CXXFLAGS=-fvisibility-inlines-hidden -std=c++11 -fmessage-length=0 -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -O2 -pipe -I$PREFIX/include -fdebug-prefix-map=${SRC_DIR}=/usr/local/src/conda/${PKG_NAME}-${PKG_VERSION} -fdebug-prefix-map=${PREFIX}=/usr/local/src/conda-prefix
+DEBUG_CXXFLAGS=-fvisibility-inlines-hidden -std=c++11 -fmessage-length=0 -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-all -Og -g -Wall -Wextra -fvar-tracking-assignments -pipe -I$PREFIX/include -fdebug-prefix-map=${SRC_DIR}=/usr/local/src/conda/${PKG_NAME}-${PKG_VERSION} -fdebug-prefix-map=${PREFIX}=/usr/local/src/conda-prefix
+GXX=$BUILD_PREFIX/bin/x86_64-conda_cos6-linux-gnu-g++
mkdir: cannot create directory 'build': File exists
Traceback (most recent call last):
File "/root/miniconda/bin/conda-build", line 11, in <module>
sys.exit(main())
File "/root/miniconda/lib/python3.7/site-packages/conda_build/cli/main_build.py", line 469, in main
execute(sys.argv[1:])
File "/root/miniconda/lib/python3.7/site-packages/conda_build/cli/main_build.py", line 460, in execute
verify=args.verify, variants=args.variants)
File "/root/miniconda/lib/python3.7/site-packages/conda_build/api.py", line 209, in build
notest=notest, need_source_download=need_source_download, variants=variants)
File "/root/miniconda/lib/python3.7/site-packages/conda_build/build.py", line 2344, in build_tree
notest=notest,
File "/root/miniconda/lib/python3.7/site-packages/conda_build/build.py", line 1492, in build
cwd=src_dir, stats=build_stats)
File "/root/miniconda/lib/python3.7/site-packages/conda_build/utils.py", line 398, in check_call_env
return _func_defaulting_env_to_os_environ('call', *popenargs, **kwargs)
File "/root/miniconda/lib/python3.7/site-packages/conda_build/utils.py", line 378, in _func_defaulting_env_to_os_environ
raise subprocess.CalledProcessError(proc.returncode, _args)
subprocess.CalledProcessError: Command '['/bin/bash', '-o', 'errexit', '/root/miniconda/conda-bld/singa_1583682553831/work/conda_build.sh']' returned non-zero exit status 1.
```
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