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[GitHub] [spark] sunchao opened a new pull request #34064: [SPARK-36820][SQL][test-hadoop2.7] Disable LZ4 test for Hadoop 2.7
sunchao opened a new pull request #34064:
URL: https://github.com/apache/spark/pull/34064
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Disable LZ4 test in `FileSourceCodecSuite` when using `hadoop-2.7` profile.
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At the moment, parquet-mr uses LZ4 compression codec provided by Hadoop, and only since HADOOP-17292 (in 3.3.1/3.4.0) the latter added `lz4-java` to remove the restriction that the codec can only be run with native library. As consequence, the test will fail when using `hadoop-2.7` profile.
### Does this PR introduce _any_ user-facing change?
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No, it's just test.
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Existing test
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[GitHub] [spark] sunchao commented on pull request #34064: [SPARK-36820][SQL][test-hadoop2.7] Disable LZ4 test for Hadoop 2.7
Posted by GitBox <gi...@apache.org>.
sunchao commented on pull request #34064:
URL: https://github.com/apache/spark/pull/34064#issuecomment-924459695
Optionally perhaps we can install lz4 in Spark CI to make this pass, but it may be tricky for the Jenkins pipelines.
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[GitHub] [spark] SparkQA commented on pull request #34064: [SPARK-36820][SQL][test-hadoop2.7] Disable tests related to LZ4 for Hadoop 2.7 profile
Posted by GitBox <gi...@apache.org>.
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URL: https://github.com/apache/spark/pull/34064#issuecomment-924582516
**[Test build #143496 has finished](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/143496/testReport)** for PR 34064 at commit [`6e0cf67`](https://github.com/apache/spark/commit/6e0cf67ff08bae79143569b6aa6e91c8c9be09c1).
* This patch **fails Spark unit tests**.
* This patch merges cleanly.
* This patch adds no public classes.
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[GitHub] [spark] viirya closed pull request #34064: [SPARK-36820][SQL] Disable tests related to LZ4 for Hadoop 2.7 profile
Posted by GitBox <gi...@apache.org>.
viirya closed pull request #34064:
URL: https://github.com/apache/spark/pull/34064
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[GitHub] [spark] viirya commented on pull request #34064: [SPARK-36820][SQL][test-hadoop2.7] Disable tests related to LZ4 for Hadoop 2.7 profile
Posted by GitBox <gi...@apache.org>.
viirya commented on pull request #34064:
URL: https://github.com/apache/spark/pull/34064#issuecomment-924650261
Thanks! Merging to master.
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URL: https://github.com/apache/spark/pull/34064#issuecomment-924587015
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[GitHub] [spark] SparkQA commented on pull request #34064: [SPARK-36820][SQL][test-hadoop2.7] Disable tests related to LZ4 for Hadoop 2.7 profile
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URL: https://github.com/apache/spark/pull/34064#issuecomment-924580215
**[Test build #143492 has finished](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/143492/testReport)** for PR 34064 at commit [`4d494a6`](https://github.com/apache/spark/commit/4d494a62f4e7a0d06716ef775a0066b650a2fe44).
* This patch **fails Spark unit tests**.
* This patch merges cleanly.
* This patch adds no public classes.
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[GitHub] [spark] mridulm commented on pull request #34064: [SPARK-36820][SQL][test-hadoop2.7] Disable LZ4 test for Hadoop 2.7
Posted by GitBox <gi...@apache.org>.
mridulm commented on pull request #34064:
URL: https://github.com/apache/spark/pull/34064#issuecomment-924534422
I am not sure if this Suite is also having issues with hadoop-2.7 profile; but the issue I had observed was in FileSuite in core.
Full failure message:
```
- SequenceFile (compressed) - lz4 *** FAILED ***
org.apache.spark.SparkException: Job aborted.
at org.apache.spark.internal.io.SparkHadoopWriter$.write(SparkHadoopWriter.scala:106)
at org.apache.spark.rdd.PairRDDFunctions.$anonfun$saveAsHadoopDataset$1(PairRDDFunctions.scala:1090)
at scala.runtime.java8.JFunction0$mcV$sp.apply(JFunction0$mcV$sp.java:23)
at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:151)
at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:112)
at org.apache.spark.rdd.RDD.withScope(RDD.scala:414)
at org.apache.spark.rdd.PairRDDFunctions.saveAsHadoopDataset(PairRDDFunctions.scala:1088)
at org.apache.spark.rdd.PairRDDFunctions.$anonfun$saveAsHadoopFile$4(PairRDDFunctions.scala:1061)
at scala.runtime.java8.JFunction0$mcV$sp.apply(JFunction0$mcV$sp.java:23)
at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:151)
...
Cause: org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 1.0 failed 1 times, most recent failure: Lost task 0.0 in stage 1.0 (TID 1) (localhost executor driver): java.lang.RuntimeException: native lz4 library not available
at org.apache.hadoop.io.compress.Lz4Codec.getCompressorType(Lz4Codec.java:125)
at org.apache.hadoop.io.compress.CodecPool.getCompressor(CodecPool.java:150)
at org.apache.hadoop.io.compress.CodecPool.getCompressor(CodecPool.java:168)
at org.apache.hadoop.io.SequenceFile$Writer.init(SequenceFile.java:1263)
at org.apache.hadoop.io.SequenceFile$Writer.<init>(SequenceFile.java:1156)
at org.apache.hadoop.io.SequenceFile$BlockCompressWriter.<init>(SequenceFile.java:1511)
at org.apache.hadoop.io.SequenceFile.createWriter(SequenceFile.java:277)
at org.apache.hadoop.io.SequenceFile.createWriter(SequenceFile.java:530)
at org.apache.hadoop.mapred.SequenceFileOutputFormat.getRecordWriter(SequenceFileOutputFormat.java:64)
at org.apache.spark.internal.io.HadoopMapRedWriteConfigUtil.initWriter(SparkHadoopWriter.scala:238)
at org.apache.spark.internal.io.SparkHadoopWriter$.executeTask(SparkHadoopWriter.scala:126)
at org.apache.spark.internal.io.SparkHadoopWriter$.$anonfun$write$1(SparkHadoopWriter.scala:88)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
at org.apache.spark.scheduler.Task.run(Task.scala:131)
at org.apache.spark.executor.Executor$TaskRunner.$anonfun$run$3(Executor.scala:506)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1462)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:509)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Driver stacktrace:
at org.apache.spark.scheduler.DAGScheduler.failJobAndIndependentStages(DAGScheduler.scala:2403)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$abortStage$2(DAGScheduler.scala:2352)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$abortStage$2$adapted(DAGScheduler.scala:2351)
at scala.collection.mutable.ResizableArray.foreach(ResizableArray.scala:62)
at scala.collection.mutable.ResizableArray.foreach$(ResizableArray.scala:55)
at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:49)
at org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:2351)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$handleTaskSetFailed$1(DAGScheduler.scala:1109)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$handleTaskSetFailed$1$adapted(DAGScheduler.scala:1109)
at scala.Option.foreach(Option.scala:407)
...
Cause: java.lang.RuntimeException: native lz4 library not available
at org.apache.hadoop.io.compress.Lz4Codec.getCompressorType(Lz4Codec.java:125)
at org.apache.hadoop.io.compress.CodecPool.getCompressor(CodecPool.java:150)
at org.apache.hadoop.io.compress.CodecPool.getCompressor(CodecPool.java:168)
at org.apache.hadoop.io.SequenceFile$Writer.init(SequenceFile.java:1263)
at org.apache.hadoop.io.SequenceFile$Writer.<init>(SequenceFile.java:1156)
at org.apache.hadoop.io.SequenceFile$BlockCompressWriter.<init>(SequenceFile.java:1511)
at org.apache.hadoop.io.SequenceFile.createWriter(SequenceFile.java:277)
at org.apache.hadoop.io.SequenceFile.createWriter(SequenceFile.java:530)
at org.apache.hadoop.mapred.SequenceFileOutputFormat.getRecordWriter(SequenceFileOutputFormat.java:64)
at org.apache.spark.internal.io.HadoopMapRedWriteConfigUtil.initWriter(SparkHadoopWriter.scala:238)
...
```
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* This patch passes all tests.
* This patch merges cleanly.
* This patch adds no public classes.
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[GitHub] [spark] dongjoon-hyun commented on pull request #34064: [SPARK-36820][SQL] Disable tests related to LZ4 for Hadoop 2.7 profile
Posted by GitBox <gi...@apache.org>.
dongjoon-hyun commented on pull request #34064:
URL: https://github.com/apache/spark/pull/34064#issuecomment-925265122
+1, late LGTM. Thank you, @sunchao and all!
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[GitHub] [spark] sunchao commented on pull request #34064: [SPARK-36820][SQL][test-hadoop2.7] Disable LZ4 test for Hadoop 2.7
Posted by GitBox <gi...@apache.org>.
sunchao commented on pull request #34064:
URL: https://github.com/apache/spark/pull/34064#issuecomment-924571744
Also need to fix ParquetCompressionCodecPrecedenceSuite from #34012, which is master only.
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[GitHub] [spark] viirya commented on pull request #34064: [SPARK-36820][SQL][test-hadoop2.7] Disable LZ4 test for Hadoop 2.7
Posted by GitBox <gi...@apache.org>.
viirya commented on pull request #34064:
URL: https://github.com/apache/spark/pull/34064#issuecomment-924537243
Oh, @sunchao I think we also need to exclude lz4 in FileSuite for hadoop 2.7 too.
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sure let me do it now
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Thanks @mridulm . Let me check that and update the PR
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I am not sure if this Suite is also having issues with hadoop-2.7 profile; but the issue I had observed was in FileSuite in core.
This was working fine in 3.1 IIRC
Full failure message:
```
- SequenceFile (compressed) - lz4 *** FAILED ***
org.apache.spark.SparkException: Job aborted.
at org.apache.spark.internal.io.SparkHadoopWriter$.write(SparkHadoopWriter.scala:106)
at org.apache.spark.rdd.PairRDDFunctions.$anonfun$saveAsHadoopDataset$1(PairRDDFunctions.scala:1090)
at scala.runtime.java8.JFunction0$mcV$sp.apply(JFunction0$mcV$sp.java:23)
at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:151)
at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:112)
at org.apache.spark.rdd.RDD.withScope(RDD.scala:414)
at org.apache.spark.rdd.PairRDDFunctions.saveAsHadoopDataset(PairRDDFunctions.scala:1088)
at org.apache.spark.rdd.PairRDDFunctions.$anonfun$saveAsHadoopFile$4(PairRDDFunctions.scala:1061)
at scala.runtime.java8.JFunction0$mcV$sp.apply(JFunction0$mcV$sp.java:23)
at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:151)
...
Cause: org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 1.0 failed 1 times, most recent failure: Lost task 0.0 in stage 1.0 (TID 1) (localhost executor driver): java.lang.RuntimeException: native lz4 library not available
at org.apache.hadoop.io.compress.Lz4Codec.getCompressorType(Lz4Codec.java:125)
at org.apache.hadoop.io.compress.CodecPool.getCompressor(CodecPool.java:150)
at org.apache.hadoop.io.compress.CodecPool.getCompressor(CodecPool.java:168)
at org.apache.hadoop.io.SequenceFile$Writer.init(SequenceFile.java:1263)
at org.apache.hadoop.io.SequenceFile$Writer.<init>(SequenceFile.java:1156)
at org.apache.hadoop.io.SequenceFile$BlockCompressWriter.<init>(SequenceFile.java:1511)
at org.apache.hadoop.io.SequenceFile.createWriter(SequenceFile.java:277)
at org.apache.hadoop.io.SequenceFile.createWriter(SequenceFile.java:530)
at org.apache.hadoop.mapred.SequenceFileOutputFormat.getRecordWriter(SequenceFileOutputFormat.java:64)
at org.apache.spark.internal.io.HadoopMapRedWriteConfigUtil.initWriter(SparkHadoopWriter.scala:238)
at org.apache.spark.internal.io.SparkHadoopWriter$.executeTask(SparkHadoopWriter.scala:126)
at org.apache.spark.internal.io.SparkHadoopWriter$.$anonfun$write$1(SparkHadoopWriter.scala:88)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
at org.apache.spark.scheduler.Task.run(Task.scala:131)
at org.apache.spark.executor.Executor$TaskRunner.$anonfun$run$3(Executor.scala:506)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1462)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:509)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Driver stacktrace:
at org.apache.spark.scheduler.DAGScheduler.failJobAndIndependentStages(DAGScheduler.scala:2403)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$abortStage$2(DAGScheduler.scala:2352)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$abortStage$2$adapted(DAGScheduler.scala:2351)
at scala.collection.mutable.ResizableArray.foreach(ResizableArray.scala:62)
at scala.collection.mutable.ResizableArray.foreach$(ResizableArray.scala:55)
at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:49)
at org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:2351)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$handleTaskSetFailed$1(DAGScheduler.scala:1109)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$handleTaskSetFailed$1$adapted(DAGScheduler.scala:1109)
at scala.Option.foreach(Option.scala:407)
...
Cause: java.lang.RuntimeException: native lz4 library not available
at org.apache.hadoop.io.compress.Lz4Codec.getCompressorType(Lz4Codec.java:125)
at org.apache.hadoop.io.compress.CodecPool.getCompressor(CodecPool.java:150)
at org.apache.hadoop.io.compress.CodecPool.getCompressor(CodecPool.java:168)
at org.apache.hadoop.io.SequenceFile$Writer.init(SequenceFile.java:1263)
at org.apache.hadoop.io.SequenceFile$Writer.<init>(SequenceFile.java:1156)
at org.apache.hadoop.io.SequenceFile$BlockCompressWriter.<init>(SequenceFile.java:1511)
at org.apache.hadoop.io.SequenceFile.createWriter(SequenceFile.java:277)
at org.apache.hadoop.io.SequenceFile.createWriter(SequenceFile.java:530)
at org.apache.hadoop.mapred.SequenceFileOutputFormat.getRecordWriter(SequenceFileOutputFormat.java:64)
at org.apache.spark.internal.io.HadoopMapRedWriteConfigUtil.initWriter(SparkHadoopWriter.scala:238)
...
```
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[GitHub] [spark] gengliangwang commented on pull request #34064: [SPARK-36820][SQL][test-hadoop2.7] Disable LZ4 test for Hadoop 2.7
Posted by GitBox <gi...@apache.org>.
gengliangwang commented on pull request #34064:
URL: https://github.com/apache/spark/pull/34064#issuecomment-924555610
@mridulm I tried the following commands on spark-3.1.1-bin-hadoop2.7 and it failed with `java.lang.RuntimeException: native lz4 library not available`:
```
spark.sql("set spark.sql.parquet.compression.codec=lz4")
spark.range(10).write.parquet("/tmp/foo")
```
The lz4 codec test in FileSuite was added in #33940 which is not on branch-3.1
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[GitHub] [spark] gengliangwang commented on pull request #34064: [SPARK-36820][SQL][test-hadoop2.7] Disable LZ4 test for Hadoop 2.7
Posted by GitBox <gi...@apache.org>.
gengliangwang commented on pull request #34064:
URL: https://github.com/apache/spark/pull/34064#issuecomment-924572794
> Also need to fix ParquetCompressionCodecPrecedenceSuite from #34012, which is master only.
@sunchao could you open a PR against branch-3.2 as well? I would like to build RC4 today.
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[GitHub] [spark] SparkQA commented on pull request #34064: [SPARK-36820][SQL][test-hadoop2.7] Disable LZ4 test for Hadoop 2.7
Posted by GitBox <gi...@apache.org>.
SparkQA commented on pull request #34064:
URL: https://github.com/apache/spark/pull/34064#issuecomment-924544545
**[Test build #143496 has started](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/143496/testReport)** for PR 34064 at commit [`6e0cf67`](https://github.com/apache/spark/commit/6e0cf67ff08bae79143569b6aa6e91c8c9be09c1).
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[GitHub] [spark] SparkQA commented on pull request #34064: [SPARK-36820][SQL][test-hadoop2.7] Disable LZ4 test for Hadoop 2.7
Posted by GitBox <gi...@apache.org>.
SparkQA commented on pull request #34064:
URL: https://github.com/apache/spark/pull/34064#issuecomment-924498987
**[Test build #143492 has started](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/143492/testReport)** for PR 34064 at commit [`4d494a6`](https://github.com/apache/spark/commit/4d494a62f4e7a0d06716ef775a0066b650a2fe44).
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