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Posted to issues@mxnet.apache.org by GitBox <gi...@apache.org> on 2020/09/27 21:33:22 UTC
[GitHub] [incubator-mxnet] kstawiski opened a new issue #19238: Unable to compile mxnet R package.
kstawiski opened a new issue #19238:
URL: https://github.com/apache/incubator-mxnet/issues/19238
## Description
Since few last commits, I'm having a problem with compiling and installing mxnet for R in Docker image.
Nothing changed in the command that previously worked.
### Error Message
```
make: R-package/Makefile: No such file or directory
make: *** No rule to make target 'R-package/Makefile'. Stop.
```
It happens on both CPU and GPU-based version.
### Steps to reproduce
(Paste the commands you ran that produced the error.)
For CPU-based version:
```
/bin/sh -c pip install --upgrade cmake && cd / && git clone --recursive https://github.com/apache/incubator-mxnet.git && cd /incubator-mxnet && mkdir build && cd build && cmake -DUSE_CUDA=OFF -DUSE_MKL_IF_AVAILABLE=ON -DUSE_MKLDNN=OFF -DUSE_OPENMP=ON -DUSE_OPENCV=ON .. && make -j $(nproc) USE_OPENCV=1 USE_BLAS=openblas && make install && cp -a . .. && cp -a . ../lib && cd /incubator-mxnet/ && make -f R-package/Makefile rpkg
```
For GPU-based version:
```
RUN pip install --upgrade cmake && cd / && git clone --recursive https://github.com/apache/incubator-mxnet.git && cd /incubator-mxnet && mkdir build && cd build && cmake -DUSE_CUDA=ON -DUSE_MKL_IF_AVAILABLE=ON -DUSE_MKLDNN=OFF -DUSE_OPENMP=ON -DUSE_OPENCV=ON .. && make -j $(nproc) USE_OPENCV=1 USE_BLAS=openblas && make install && cp -a . .. && cp -a . ../lib && cd /incubator-mxnet/ && make -f R-package/Makefile rpkg
```
## What have you tried to solve it?
1. Check documentation on any updates about compiling R package - none found.
## Environment
Ubuntu-based docker images, Dockerfiles: https://github.com/kstawiski/miRNAselector/blob/master/Dockerfile.gpu and https://github.com/kstawiski/miRNAselector/blob/master/Dockerfile
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[GitHub] [incubator-mxnet] kstawiski commented on issue #19238: Unable to compile mxnet R package.
Posted by GitBox <gi...@apache.org>.
kstawiski commented on issue #19238:
URL: https://github.com/apache/incubator-mxnet/issues/19238#issuecomment-699691947
Thank you @szha for the quick response. Closing the issue.
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[GitHub] [incubator-mxnet] github-actions[bot] commented on issue #19238: Unable to compile mxnet R package.
Posted by GitBox <gi...@apache.org>.
github-actions[bot] commented on issue #19238:
URL: https://github.com/apache/incubator-mxnet/issues/19238#issuecomment-699691107
Welcome to Apache MXNet (incubating)! We are on a mission to democratize AI, and we are glad that you are contributing to it by opening this issue.
Please make sure to include all the relevant context, and one of the @apache/mxnet-committers will be here shortly.
If you are interested in contributing to our project, let us know! Also, be sure to check out our guide on [contributing to MXNet](https://mxnet.apache.org/community/contribute) and our [development guides wiki](https://cwiki.apache.org/confluence/display/MXNET/Developments).
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[GitHub] [incubator-mxnet] szha commented on issue #19238: Unable to compile mxnet R package.
Posted by GitBox <gi...@apache.org>.
szha commented on issue #19238:
URL: https://github.com/apache/incubator-mxnet/issues/19238#issuecomment-699691172
Hi @kstawiski, we have temporarily removed the R package from the master branch due to C-API changes. For now, please make sure that you use `git clone --recursive https://github.com/apache/incubator-mxnet.git -b v1.x` when checking out the code base.
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[GitHub] [incubator-mxnet] kstawiski closed issue #19238: Unable to compile mxnet R package.
Posted by GitBox <gi...@apache.org>.
kstawiski closed issue #19238:
URL: https://github.com/apache/incubator-mxnet/issues/19238
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