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Posted to commits@isis.apache.org by da...@apache.org on 2014/02/12 00:31:09 UTC

[12/51] [partial] ISIS-694: mothballing the docbkx folders.

http://git-wip-us.apache.org/repos/asf/isis/blob/7a7836e3/mothballed/docbkx/core/src/docbkx/guide-runtime-to-incorporate/isis-default-runtime.xml
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diff --git a/mothballed/docbkx/core/src/docbkx/guide-runtime-to-incorporate/isis-default-runtime.xml b/mothballed/docbkx/core/src/docbkx/guide-runtime-to-incorporate/isis-default-runtime.xml
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+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE book PUBLIC "-//OASIS//DTD DocBook XML V4.5//EN"
+"file:./src/docbkx/dtd-4.5/docbookx.dtd">
+<!--
+  Licensed to the Apache Software Foundation (ASF) under one
+  or more contributor license agreements.  See the NOTICE file
+  distributed with this work for additional information
+  regarding copyright ownership.  The ASF licenses this file
+  to you under the Apache License, Version 2.0 (the
+  "License"); you may not use this file except in compliance
+  with the License.  You may obtain a copy of the License at
+
+        http://www.apache.org/licenses/LICENSE-2.0
+
+  Unless required by applicable law or agreed to in writing,
+  software distributed under the License is distributed on an
+  "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+  KIND, either express or implied.  See the License for the
+  specific language governing permissions and limitations
+  under the License.
+-->
+<book>
+  <bookinfo>
+    <title><?eval ${docbkxGuideTitle}?></title>
+
+    <subtitle><?eval ${docbkxGuideSubTitle}?></subtitle>
+
+    <releaseinfo><?eval ${project.version}?></releaseinfo>
+
+    <authorgroup>
+      <author>
+        <firstname>Dan</firstname>
+
+        <surname>Haywood</surname>
+      </author>
+    </authorgroup>
+
+    <legalnotice>
+      <para>Permission is granted to make and distribute verbatim copies of
+      this manual provided that the copyright notice and this permission
+      notice are preserved on all copies.</para>
+    </legalnotice>
+  </bookinfo>
+
+  <!-- front matter -->
+
+  <toc></toc>
+
+  <preface id="preface">
+    <title>Preface</title>
+
+    <para><emphasis>Apache Isis</emphasis> is designed to allow programmers
+    rapidly develop domain-driven applications following the <ulink
+    url="http://en.wikipedia.org/wiki/Naked_Objects">Naked Objects</ulink>
+    pattern. It is made up of a core framework that supports supports various
+    viewers, along with <acronym>API</acronym>s and implementations relating
+    to security, the programming model, the runtime (persistence) and profile
+    stores (user preferences). <emphasis>Apache Isis</emphasis> is hosted at
+    the <ulink url="http://incubator.apache.org/isis">Apache
+    Foundation</ulink>, and is licensed under <ulink
+    url="http://www.apache.org/licenses/LICENSE-2.0.html">Apache Software
+    License v2</ulink>.</para>
+
+    <para>The role of the runtime component within <emphasis>Isis</emphasis>
+    is to bootstrap the application and components, and to manage the
+    lifecycle of domain object entities. Typically, this means managing their
+    persistence and identity.</para>
+
+    <para>The runtime component within Isis is also pluggable. This guide
+    describes the <emphasis>default runtime</emphasis> implementation, which
+    consists of a number of a parent module
+    <package>[oai.runtimes:dflt]</package> and a number of child submodules.
+    These submodules allow the behaviour of the default runtime to be
+    customized, most notably to to support different objectstores. The
+    <emphasis>default runtime</emphasis> also supports a number of other
+    capabilities, such as client/server remoting and the concept of
+    profilestores.</para>
+
+    <sect1>
+      <title>Who this Guide is For</title>
+
+      <para>This guide is written for deployers looking to configure
+      <emphasis>Isis</emphasis> to run using the default runtime, in any of
+      the supported configurations. It is divided into two parts:<itemizedlist>
+          <listitem>
+            <para>Users' Guide (<xref linkend="prt.UsersGuide" />)</para>
+
+            <para>The chapters in this part of the guide are written for the
+            developer who wants to just use the <emphasis>default
+            runtime</emphasis> in their own domain applications. It describe
+            how to run applications that use the <emphasis>default
+            runtime</emphasis> in the development environment, how to
+            configure the <emphasis>default runtime</emphasis>, and how to
+            deploy applications in the various different ways using the
+            <emphasis>default runtime</emphasis>.</para>
+          </listitem>
+
+          <listitem>
+            <para>Contributors' Guide (<xref
+            linkend="prt.ContributorsGuide" />)</para>
+
+            <para>The chapters in this part of the guide are written for those
+            Isis contributors who want to enhance, improve or otherwise change
+            the <emphasis>default runtime</emphasis> itself They describe the
+            core concepts underpinning the design of the <emphasis>default
+            runtime</emphasis>, and provide a walk through of each of the
+            modules that make up the <emphasis>default
+            runtime</emphasis>.</para>
+          </listitem>
+        </itemizedlist></para>
+    </sect1>
+
+    <sect1>
+      <title>How this Guide relates to other Documentation</title>
+
+      <para>The <emphasis>core</emphasis> documentation
+      <package>[oai:core]</package> describes common modules, including
+      reusable classes that make up the <emphasis>core runtime</emphasis>
+      <package>[oai.core:runtime]</package>. This module, the
+      <emphasis>default runtime</emphasis>, makes use of these classes, as
+      well as other components. It also defines a number of its own
+      <acronym>sub-API</acronym>s.</para>
+    </sect1>
+  </preface>
+
+  <part id="prt.UsersGuide">
+    <title>Users Guide</title>
+
+    <partintro>
+      <para>This part of the guide is written for developers who wish to run
+      their own Isis domain applications using the <emphasis>default
+      runtime</emphasis>, and wish to configure the default runtime for their
+      own particular application.</para>
+
+      <para>The chapters are organized as follows:</para>
+
+      <itemizedlist>
+        <listitem>
+          <para>getting started (in the development environment)</para>
+
+          <para>how to run an <emphasis>Isis</emphasis> application using the
+          default runtime within the development environment</para>
+        </listitem>
+
+        <listitem>
+          <para>deploying as a webapp</para>
+
+          <para>How to take an <emphasis>Isis</emphasis> application and
+          deploy it as a web application (using one of the
+          <emphasis>Isis</emphasis> web viewers)</para>
+        </listitem>
+
+        <listitem>
+          <para>deploying in standalone mode</para>
+
+          <para>How to take an <emphasis>Isis</emphasis> application and
+          deploy it as a standalone application (using the DnD viewer or
+          similar)</para>
+        </listitem>
+
+        <listitem>
+          <para>deploying in client/server mode</para>
+
+          <para>How to take an <emphasis>Isis</emphasis> application and
+          deploy it as a client/server application (using the DnD viewer or
+          similar for the client, and another instance of the application
+          running as the server)</para>
+        </listitem>
+      </itemizedlist>
+
+      <para></para>
+    </partintro>
+
+    <chapter>
+      <title>Getting Started</title>
+
+      <para>This chapter assumes that you have an application that has been
+      generated using the Maven quickstart archetype. This archetype generates
+      an application that is preconfigured to run using the <emphasis>default
+      runtime</emphasis>, so some of what is documented here will already have
+      been set up.</para>
+
+      <sect1 id="sec.RuntimeLauncher">
+        <title>Launching <classname>Isis</classname></title>
+
+        <para>The <emphasis>default runtime</emphasis> provides several
+        different mechanisms by which to launch an <emphasis>Apache
+        Isis</emphasis> application.</para>
+
+        <itemizedlist>
+          <listitem>
+            <para>the first is the <classname>org.apache.isis.Isis</classname>
+            command line runner.</para>
+
+            <para>This allows Isis to be run from the command line, with the
+            <acronym>UI</acronym> to use being specified by the
+            <code>--viewer</code> flag.</para>
+          </listitem>
+
+          <listitem>
+            <para>the second is the
+            <classname>org.apache.isis.WebServer</classname> webapp
+            runner.</para>
+
+            <para>This is intended to be used only with Maven modules that are
+            structured as a webapp; specifically, with a
+            <filename>src/main/webapp/WEB-INF/web.xml</filename> file.</para>
+
+            <para>The <classname>WebServer</classname> class is completely
+            generic, so in principle this <filename>web.xml</filename> could
+            contain any servlets etc. To use <emphasis>Isis</emphasis>,
+            though, it will typically contain the
+            <classname>oai.runtimes.dflt.webapp.IsisWebAppBootstrapper</classname>
+            (a <classname>javax.servlet.ServletContextListener</classname>),
+            along with the
+            <classname>oai.runtimes.dflt.webapp.IsisSessionFilter</classname>
+            (<classname>a javax.servlet.Filter</classname>)<footnote>
+                <para>We say "typically"; however some of the web-based
+                viewers have their own, equivalent, mechanisms. For example,
+                the <emphasis>Wicket viewer</emphasis>
+                <package>[oai.viewer:wicket]</package> provides a custom
+                subclass of the org.apache.wicket.Application for
+                bootstrapping, while the two RESTful viewers (<emphasis>JSON
+                viewer</emphasis> and <emphasis>XHTML viewer</emphasis>) are
+                bootstrapped using the
+                <classname>org.jboss.resteasy.plugins.server.servlet.ResteasyBootstrap</classname>,
+                providing a custom subclass of
+                <classname>javax.ws.rs.core.Application</classname> to
+                register with Resteasy.</para>
+              </footnote>.</para>
+          </listitem>
+
+          <listitem>
+            <para>the third option also applies only for webapps, and is
+            simply to run using your IDE's built-in support for hosting
+            webapps. For example, if using Eclipse then this is the <ulink
+            url="http://eclipse.org/webtools">Eclipse WTP</ulink>
+            support.</para>
+          </listitem>
+
+          <listitem>
+            <para>and the final option is similar, and also applies only to
+            webapps, namely to run the webapp from Maven using <code>mvn
+            jetty:run</code> plugin.</para>
+          </listitem>
+        </itemizedlist>
+
+        <para>Both <classname>org.apache.isis.Isis</classname> and
+        <classname>org.apache.isis.WebServer</classname> classes have main()
+        methods meaning that they are run from the command line. If you have
+        run the archetype then you'll find that there are Eclipse IDE launch
+        configurations for both <classname>oai.Isis</classname> and
+        <classname>oai.WebRunner</classname> (in the
+        <filename>ide/eclipse/launch</filename> directories).</para>
+
+        <para>These two runners act as follows:</para>
+
+        <itemizedlist>
+          <listitem>
+            <para>start up the logging so that log messages are never
+            lost;</para>
+          </listitem>
+
+          <listitem>
+            <para>load up all the installers (component factories) that can be
+            found on the classpath from the
+            <filename>installer-registry.properties</filename> file.
+            (Physically this is packaged within the
+            [oai.core:isis-core-runtime] module's
+            <acronym>JAR</acronym>).</para>
+
+            <para>This allow the runner class to be aware of all the
+            components that are available;</para>
+          </listitem>
+
+          <listitem>
+            <para>parse the command line flags;</para>
+
+            <para>If there is problem with these then a help text is displayed
+            list all the options and the program exits</para>
+          </listitem>
+
+          <listitem>
+            <para>with the command line flags processed, initialize the
+            installers and bootstraps the system.</para>
+          </listitem>
+        </itemizedlist>
+
+        <para>The next section lists the command line flags supported by these
+        two runners.</para>
+      </sect1>
+
+      <sect1>
+        <title>Command Line Flags</title>
+
+        <para>The following table summarises the command line-flags common to
+        both <classname>org.apache.isis.Isis</classname> commandline runner as
+        well as the <classname>org.apache.isis.WebServer</classname> webapp
+        runner utility.</para>
+
+        <note>
+          <para>Internally, all options are handled by subclasses of the
+          <classname>oai.core.runtime.optionhandler.OptionHandler</classname>
+          interface.</para>
+        </note>
+
+        <para><table>
+            <title>Common command line flags</title>
+
+            <tgroup cols="6">
+              <colspec align="center" />
+
+              <colspec colwidth="10%" />
+
+              <colspec />
+
+              <colspec />
+
+              <colspec />
+
+              <colspec />
+
+              <thead>
+                <row>
+                  <entry align="center">Flag</entry>
+
+                  <entry align="center">Long form</entry>
+
+                  <entry align="center">Purpose</entry>
+
+                  <entry align="center">Typical values</entry>
+
+                  <entry align="center">Default value</entry>
+
+                  <entry align="center">Notes</entry>
+                </row>
+              </thead>
+
+              <tbody>
+                <row>
+                  <entry>-t <emphasis>deploymenttype</emphasis></entry>
+
+                  <entry>--type</entry>
+
+                  <entry>The deployment mode; influences other settings and
+                  defaults.</entry>
+
+                  <entry><emphasis>exploration</emphasis>,
+                  <emphasis>prototype</emphasis>, <emphasis>client,
+                  singleuser, server_exploration, server_prototype, server,
+                  utilty</emphasis></entry>
+
+                  <entry><emphasis>prototype</emphasis></entry>
+
+                  <entry>Value corresponds to lower case form of
+                  <classname>DeploymentType</classname> class. If running
+                  under <classname>WebServer</classname>, should only use
+                  <emphasis>server_xxx</emphasis> values. Some viewers (eg the
+                  wicket viewer) may define additional deployment
+                  types.</entry>
+                </row>
+
+                <row>
+                  <entry>-v <emphasis>viewername</emphasis></entry>
+
+                  <entry>--viewer</entry>
+
+                  <entry>Specifies the user interface (viewer
+                  implementation).</entry>
+
+                  <entry><emphasis>dnd</emphasis>, <emphasis>html</emphasis>,
+                  <emphasis>restful</emphasis>, or FQCN that implements
+                  <classname>ViewerInstaller</classname>. can also specify
+                  <emphasis>encoding-http, encoding-sockets,
+                  serializing-sockets, xstream-sockets</emphasis></entry>
+
+                  <entry><emphasis>dnd</emphasis></entry>
+
+                  <entry><para>Values are taken from
+                  <filename>installer-registry.properties</filename>. See also
+                  <xref
+                  linkend="sec.ClientConnectorVsViewer" /></para></entry>
+                </row>
+
+                <row>
+                  <entry>-r <emphasis>persistorname</emphasis></entry>
+
+                  <entry>--persistor</entry>
+
+                  <entry>The persistence mechanism (ie object store
+                  implementation) to use for persisting domain objects between
+                  runs.</entry>
+
+                  <entry><emphasis>in-memory, xml, sql, nosql, fileserver,
+                  mongodb</emphasis>, or FQCN that implements
+                  <classname>PersistenceMechanismInstaller</classname>.</entry>
+
+                  <entry>depends upon the deployment type, eg is
+                  <emphasis>in-memory</emphasis> for
+                  <emphasis>exploration</emphasis>, or
+                  <emphasis>xml</emphasis> if
+                  <emphasis>server</emphasis>.</entry>
+
+                  <entry>Ignored if deployment type is
+                  <emphasis>client</emphasis>. Values are taken from
+                  <filename>installer-registry.properties</filename></entry>
+                </row>
+
+                <row>
+                  <entry>-e <emphasis>profilestorename</emphasis></entry>
+
+                  <entry>--user-profile-store</entry>
+
+                  <entry>The profile store implementation to use for
+                  persisting user profile data between runs.</entry>
+
+                  <entry><emphasis>in-memory, xml</emphasis>, or FQCN that
+                  implements
+                  <classname>UserProfileStoreInstaller</classname>.</entry>
+
+                  <entry>depends upon the deployment type, eg is
+                  <emphasis>in-memory</emphasis> for
+                  <emphasis>exploration</emphasis>, or
+                  <emphasis>xml</emphasis> if
+                  <emphasis>server</emphasis>.</entry>
+
+                  <entry>Values are taken from
+                  <filename>installer-registry.properties</filename></entry>
+                </row>
+
+                <row>
+                  <entry>-x <emphasis>connectorname</emphasis></entry>
+
+                  <entry>--connector</entry>
+
+                  <entry>The protocol to use for a client when deploying
+                  client/server.</entry>
+
+                  <entry><emphasis>encoding-http, encoding-sockets,
+                  serializing-sockets, xstream-sockets</emphasis>, or FQCN
+                  that implements
+                  <classname>ClientConnectionInstaller</classname>.</entry>
+
+                  <entry></entry>
+
+                  <entry>Ignored if deployment type is not
+                  <emphasis>client</emphasis>. Values are taken from
+                  <filename>installer-registry.properties</filename>. See also
+                  <xref linkend="sec.ClientConnectorVsViewer" /></entry>
+                </row>
+
+                <row>
+                  <entry>-f <emphasis>fixturename</emphasis></entry>
+
+                  <entry>--fixture</entry>
+
+                  <entry>Specify fixtures to load (rather than read from
+                  configuration file)</entry>
+
+                  <entry>FQCN that implements
+                  <classname>InstallableFixture</classname>.</entry>
+
+                  <entry></entry>
+
+                  <entry>Ignored if deployment type is not
+                  <emphasis>exploration, prototype,
+                  server_exploration</emphasis> or
+                  <emphasis>server_prototype</emphasis>. If has been
+                  specified, any fixtures in the configuration file is
+                  ignored.</entry>
+                </row>
+
+                <row>
+                  <entry>-c <emphasis>filename</emphasis></entry>
+
+                  <entry>--config</entry>
+
+                  <entry>Loads in the specified configuration file.</entry>
+
+                  <entry></entry>
+
+                  <entry></entry>
+
+                  <entry>The file is loaded in addition to <filename
+                  class="directory" moreinfo="none">isis.properties</filename>
+                  and the properties files relating to the installed
+                  component.</entry>
+                </row>
+
+                <row>
+                  <entry>-D <emphasis>property=value</emphasis></entry>
+
+                  <entry></entry>
+
+                  <entry>Specify additional configuration properties.</entry>
+
+                  <entry></entry>
+
+                  <entry></entry>
+
+                  <entry>Multiple -D flags can be specified.</entry>
+                </row>
+
+                <row>
+                  <entry>-s</entry>
+
+                  <entry>--nosplash</entry>
+
+                  <entry>Do not show the splash screen</entry>
+
+                  <entry></entry>
+
+                  <entry></entry>
+
+                  <entry></entry>
+                </row>
+
+                <row>
+                  <entry>-quiet</entry>
+
+                  <entry></entry>
+
+                  <entry>Configure logging to log ERRORs only</entry>
+
+                  <entry></entry>
+
+                  <entry></entry>
+
+                  <entry>logging is performed internally using log4j.</entry>
+                </row>
+
+                <row>
+                  <entry>-verbose</entry>
+
+                  <entry></entry>
+
+                  <entry>Configure logging to log INFO, WARN and
+                  ERRORs.</entry>
+
+                  <entry></entry>
+
+                  <entry></entry>
+
+                  <entry>logging is performed internally using log4j.</entry>
+                </row>
+
+                <row>
+                  <entry>-debug</entry>
+
+                  <entry></entry>
+
+                  <entry>Configure logging to log DEBUG, INFO, WARN and
+                  ERRORs.</entry>
+
+                  <entry></entry>
+
+                  <entry></entry>
+
+                  <entry>logging is performed internally using log4j.</entry>
+                </row>
+
+                <row>
+                  <entry>-diagnostics</entry>
+
+                  <entry></entry>
+
+                  <entry>print information that can be used to report or
+                  diagnose problems</entry>
+
+                  <entry></entry>
+
+                  <entry></entry>
+
+                  <entry></entry>
+                </row>
+
+                <row>
+                  <entry>-version</entry>
+
+                  <entry></entry>
+
+                  <entry>Print the version of the framework.</entry>
+
+                  <entry></entry>
+
+                  <entry></entry>
+
+                  <entry></entry>
+                </row>
+
+                <row>
+                  <entry>-h</entry>
+
+                  <entry>--help</entry>
+
+                  <entry>Print out usage</entry>
+
+                  <entry></entry>
+
+                  <entry></entry>
+
+                  <entry>Only the components that can be used are
+                  listed.</entry>
+                </row>
+              </tbody>
+            </tgroup>
+          </table></para>
+
+        <para>The --type (deployment type) is discussed in more detail in
+        <xref linkend="sec.DeploymentType" />.</para>
+
+        <para>In addition, the <classname>org.apache.isis.Isis</classname>
+        commandline runner has a couple command flags specific to it:</para>
+
+        <table>
+          <title><classname>org.apache.isis.Isis</classname> additional
+          command line flags</title>
+
+          <tgroup cols="6">
+            <colspec align="center" />
+
+            <colspec colwidth="10%" />
+
+            <colspec />
+
+            <colspec />
+
+            <colspec />
+
+            <colspec />
+
+            <thead>
+              <row>
+                <entry align="center">Flag</entry>
+
+                <entry align="center">Long form</entry>
+
+                <entry align="center">Purpose</entry>
+
+                <entry align="center">Typical values</entry>
+
+                <entry align="center">Default value</entry>
+
+                <entry align="center">Notes</entry>
+              </row>
+            </thead>
+
+            <tbody>
+              <row>
+                <entry>-u <emphasis>username</emphasis></entry>
+
+                <entry>--user</entry>
+
+                <entry>Uses the specified name when logging the user in
+                (provided that --password also specified).</entry>
+
+                <entry></entry>
+
+                <entry></entry>
+
+                <entry>Ignored if deployment type is not
+                <emphasis>exploration</emphasis>,
+                <emphasis>prototype</emphasis>,
+                <emphasis>server_exploration</emphasis> or
+                <emphasis>server_prototype</emphasis>.</entry>
+              </row>
+
+              <row>
+                <entry>-p <emphasis>password</emphasis></entry>
+
+                <entry>--password</entry>
+
+                <entry>Specifies password for --username.</entry>
+
+                <entry></entry>
+
+                <entry></entry>
+
+                <entry></entry>
+              </row>
+            </tbody>
+          </tgroup>
+        </table>
+
+        <para>The username/password should be valid as per the configured
+        authentication mechanism. For example, if using the file
+        authentication mechanism, then the user/password should reside in the
+        <filename>security_file.password</filename> configuration file.</para>
+
+        <para>The <classname>org.apache.isis.WebServer</classname> webapp
+        runner also has a couple command flags specific to it:</para>
+
+        <table>
+          <title><classname>org.apache.isis.WebRunner</classname> additional
+          command line flags</title>
+
+          <tgroup cols="6">
+            <colspec align="center" />
+
+            <colspec colwidth="10%" />
+
+            <colspec />
+
+            <colspec />
+
+            <colspec />
+
+            <colspec />
+
+            <thead>
+              <row>
+                <entry align="center">Flag</entry>
+
+                <entry align="center">Long form</entry>
+
+                <entry align="center">Purpose</entry>
+
+                <entry align="center">Typical values</entry>
+
+                <entry align="center">Default value</entry>
+
+                <entry align="center">Notes</entry>
+              </row>
+            </thead>
+
+            <tbody>
+              <row>
+                <entry>-a <emphasis>address</emphasis></entry>
+
+                <entry>--address</entry>
+
+                <entry>Address to listen on</entry>
+
+                <entry></entry>
+
+                <entry>localhost</entry>
+
+                <entry></entry>
+              </row>
+
+              <row>
+                <entry>-p <emphasis>portnumber</emphasis></entry>
+
+                <entry>--port</entry>
+
+                <entry>Specifies password for --username.</entry>
+
+                <entry></entry>
+
+                <entry>8080</entry>
+
+                <entry></entry>
+              </row>
+
+              <row>
+                <entry>-w <emphasis>resourseBase</emphasis></entry>
+
+                <entry>--webapp</entry>
+
+                <entry>The location of the webapp relative to
+                <filename>src/main/webapp</filename>.</entry>
+
+                <entry></entry>
+
+                <entry></entry>
+
+                <entry>Usually left at its default, "".</entry>
+              </row>
+            </tbody>
+          </tgroup>
+        </table>
+
+        <para>The --type (deployment type) option influences the defaults for
+        other options, so warrants a little more detail.</para>
+
+        <sect2 id="sec.DeploymentType">
+          <title>Deployment Type</title>
+
+          <para>The deployment type defines the "mode" in which Isis is
+          running. The values correspond to the instances of DeploymentType,
+          and so will always include:</para>
+
+          <itemizedlist>
+            <listitem>
+              <para><emphasis>exploration</emphasis></para>
+
+              <para>Exploration mode is for developers to explore and test
+              their code, with a number of features all designed to reduce the
+              length of the feedback loop. This is covered in more detail in
+              <xref linkend="sec.ExplorationAndPrototypeModes" />.</para>
+            </listitem>
+
+            <listitem>
+              <para><emphasis>prototype</emphasis></para>
+
+              <para>The intention of prototype mode is to make the system easy
+              to demonstrate in realistic fashion, without necessarily having
+              to go through the rigamarole of building and deploying the
+              system . It has some similarities to exploration mode, so is
+              also covered in more detail in <xref
+              linkend="sec.ExplorationAndPrototypeModes" />.</para>
+            </listitem>
+
+            <listitem>
+              <para><emphasis>single-user</emphasis></para>
+
+              <para>The single user mode is for an application that is
+              intended to run a single user, with the DnD viewer (or
+              equivalent), and with the application performing its own object
+              persistence. An example might be a mail application, or a ToDo
+              manager.</para>
+            </listitem>
+
+            <listitem>
+              <para><emphasis>client</emphasis></para>
+
+              <para>Client mode is intended for client/server deployments,
+              where each user runs the application locally (with the DnD
+              viewer or equivalent), connecting to another instance of Isis
+              running as a server somewhere else on the network. With this
+              mode selected the (<emphasis>-x connectorname</emphasis> flag)
+              must also be specified.</para>
+            </listitem>
+
+            <listitem>
+              <para><emphasis>server</emphasis></para>
+
+              <para>Server mode is intended for Isis running in multi-threaded
+              mode, concurrently servicing multiple clients. Usually this
+              means Isis being deployed as a webapp using one of the web
+              viewers (HTML viewer, Scimpi, Restful, Wicket etc), but it could
+              also be running as a server for a client/server remoting
+              application.</para>
+            </listitem>
+
+            <listitem>
+              <para><emphasis>server-exploration</emphasis></para>
+
+              <para>The server-exploration mode is similar to server mode, but
+              with exploration features enabled. See <xref
+              linkend="sec.ExplorationAndPrototypeModes" /> for more detail on
+              exploration mode.</para>
+            </listitem>
+
+            <listitem>
+              <para><emphasis>server-prototype</emphasis></para>
+
+              <para>The server-prototype mode is similar to server mode, but
+              with prototyping features enabled. See <xref
+              linkend="sec.ExplorationAndPrototypeModes" /> for more detail on
+              prototype mode.</para>
+            </listitem>
+          </itemizedlist>
+
+          <para>If no mode is specified, the framework will start up in
+          <emphasis>prototype</emphasis> mode.</para>
+        </sect2>
+
+        <sect2 id="sec.ClientConnectorVsViewer">
+          <title>Relationship between Client Connectors and Viewers</title>
+
+          <para>You may have noticed that some of the same values can be
+          specified for --viewer and for --connector. Specifically, these
+          common values are: <emphasis>encoding-sockets, encoding-http,
+          serializing-sockets</emphasis>, and
+          <emphasis>xstream-sockets</emphasis>.</para>
+
+          <para>When specified as a client connector using --connector (and
+          provided that the deployment type is client), then Isis is
+          configured to run as a client in a client/server remoting
+          deployment. In this deployment mode there is no persistor/object
+          store configured, instead all requests are sent across the wire to
+          be invoked on a server. The values are used to select an
+          implementation of <classname>ClientConnectionInstaller</classname>
+          which is configured in
+          <filename>installer-registry.properties</filename><footnote>
+              <para>If you look at the source code, you'll see that
+              <classname>ClientConnectionInstaller</classname> is actually a
+              subclass of
+              <classname>PersistenceMechanismInstaller</classname>. So, in
+              fact, there <emphasis>is</emphasis> a persistence mechanism, it
+              just happens to be one that is a proxy to a network connection
+              with a server.</para>
+            </footnote>.</para>
+
+          <para>When these values are specified as a viewer using --viewer
+          (and provided that the deployment type is server), then Isis is
+          configured to run as the corresponding server. The "viewer" in this
+          case is a network listener that receives the requests from the
+          client, unmarshals them, and invokes them on the same domain objects
+          within the server.</para>
+
+          <para>The name of these client connectors/viewers xxx-yyy is a
+          concatenation both the marshalling mechanism (xxx) and underlying
+          transport (yyy):</para>
+
+          <itemizedlist>
+            <listitem>
+              <para><emphasis>encoding-sockets</emphasis> - Uses the encoding
+              mechanism (of value types) to serialize/deserialize objects,
+              over TCP/IP sockets.</para>
+            </listitem>
+
+            <listitem>
+              <para><emphasis>encoding-http</emphasis> - Uses the encoding
+              mechanism (of value types) to serialize/deserialize objects,
+              over HTTP.</para>
+            </listitem>
+
+            <listitem>
+              <para><emphasis>serializing-sockets</emphasis> - Uses Java
+              serialization (of value types) to serialize/deserialize objects,
+              over TCP/IP sockets.</para>
+            </listitem>
+
+            <listitem>
+              <para><emphasis>xstream-sockets</emphasis> - Uses the Xstream
+              library to serialize/deserialize objects to/from XML for simple
+              stream communications, over TCP/IP sockets.</para>
+            </listitem>
+          </itemizedlist>
+
+          <para>One final remark: the <emphasis>encoding-http</emphasis>
+          viewer can only be run as a webapp; see <xref
+          linkend="sec.WebAppDeployment" /> for more details on how deploying
+          this option.</para>
+        </sect2>
+      </sect1>
+
+      <sect1>
+        <title>Configuration Files</title>
+
+        <para>During start-up <emphasis>Isis</emphasis> loads in a number of
+        configuration files. The main file, <filename class="directory"
+        moreinfo="none">isis.properties</filename>, is always loaded and must
+        be present for the framework to start up. Then, dependent upon the
+        components that are specified, it will also search for other
+        configuration files. (These files do not need to be present for the
+        framework to start up).</para>
+
+        <para>For example, for the following command line parameters</para>
+
+        <screen format="linespecific">-v dnd -r xml</screen>
+
+        <para>specifies that the viewer is to be the drag and drop (<literal
+        moreinfo="none">dnd</literal>) interface, and the persistor is to be
+        the 'xml object store'. So as well as loading those components, the
+        framework will look for configuration files named
+        <filename>viewer.properties</filename>, <filename class="directory"
+        moreinfo="none">viewer_dnd.properties</filename>,
+        <filename>persistor.xml</filename> and <filename class="directory"
+        moreinfo="none">persistor_xml.properties</filename> and will load them
+        if found.</para>
+
+        <para>The location of the configuration files depends on the runner.
+        All runners will load from the classpath (eg in
+        <filename>src/main/resources</filename>). Webapp viewers will also
+        load from <filename>WEB-INF</filename> directory
+        (<filename>src/main/webapp/WEB-INF</filename>).</para>
+
+        <para>Usually the <filename>isis.properties</filename> file will be
+        quite small, because most of the component-specific configuration will
+        be in their own config files. However, two important keys will almost
+        always be present: services, and fixtures.</para>
+
+        <sect2>
+          <title>Services</title>
+
+          <para></para>
+
+          <para></para>
+
+          <para></para>
+        </sect2>
+
+        <sect2 id="sec.LoginFixture">
+          <title>Fixtures</title>
+
+          <para>Depending upon the</para>
+
+          <para>*** todo</para>
+
+          <para></para>
+
+          <para>*** discuss login fixtures.</para>
+
+          <para></para>
+
+          <para></para>
+        </sect2>
+      </sect1>
+
+      <sect1 id="sec.ExplorationAndPrototypeModes">
+        <title>Exploration and Prototype Modes</title>
+
+        <para></para>
+
+        <para>The intention of exploration mode is for developers to explore
+        and test their code, with a number of features all designed to reduce
+        the length of the feedback loop.</para>
+
+        <para></para>
+
+        <para>It enables a number of options and removes the requirement to
+        login</para>
+
+        <para>The framework always uses an in-memory persistor and runs the
+        fixtures at startup to ensure a known state every time the system is
+        started. The user is not prompted to log in, but is automatically
+        logged in as user 'exploration'.</para>
+
+        <para>The logged in user can be changed on the fly using an option
+        with the user interface; this simply changes the user and does not
+        require an explicit login action.</para>
+
+        <para>Also, exploration methods defined in the DOM are also available
+        to the user to do things that a user would not normally be allowed to
+        do. These are used expressly for testing the system.</para>
+
+        <para>It is an error to specify a persistor type in exploration
+        mode.</para>
+
+        <para></para>
+
+        <para></para>
+
+        <para><classname>LoginFixture</classname> is present, see <xref
+        linkend="sec.LoginFixture" />).</para>
+
+        <para></para>
+
+        <para>Server mode, but if a <classname>LoginFixture</classname> is
+        present then all clients will automatically be logged in as this
+        user.</para>
+
+        <para></para>
+
+        <para></para>
+
+        <para>The intention of prototype mode is to make the system easy to
+        demonstrate in realistic fashion, without necessarily having to go
+        through the rigamarole of building and deploying the system . There
+        has some similarities to exploration mode, so is covered also in <xref
+        linkend="sec.ExplorationAndPrototypeModes" /></para>
+
+        <para>similar to exploration mode</para>
+
+        <para>The user is always prompted to log in at start up, and can log
+        out and log in again without losing the state of the objects. This
+        allows a user to demonstrate exactly how a system would work.</para>
+
+        <para></para>
+
+        <para>*** discuss the shaded JARs from the Maven plugin.</para>
+
+        <para></para>
+
+        <para></para>
+
+        <para>The list of users that can be switched between during
+        exploration can be listed, separated by commas, with the following
+        property. If no users are specified the default user "exploration"
+        will be used and switching between users will not be possible.</para>
+
+        <programlisting format="linespecific">isis.exploration.users=sven, dick, bob</programlisting>
+
+        <para>To disable the showing of exploration menu items set the
+        following property to false (by default exploration options are
+        shown).</para>
+
+        <programlisting format="linespecific">isis.exploration.show=false</programlisting>
+
+        <para></para>
+      </sect1>
+    </chapter>
+
+    <chapter>
+      <title>Standalone Deployment</title>
+
+      <para></para>
+
+      <note>
+        <para>TODO: discuss sealed/signed JARs to prevent tampering?</para>
+      </note>
+
+      <para></para>
+
+      <sect1>
+        <title>Setting up Security</title>
+
+        <para></para>
+
+        <para></para>
+
+        <para></para>
+
+        <para></para>
+      </sect1>
+    </chapter>
+
+    <chapter>
+      <title>Client/Server Deployment</title>
+
+      <para></para>
+
+      <para>*** defer encoding-http to next chapter.</para>
+
+      <para></para>
+
+      <section>
+        <title></title>
+
+        <para></para>
+
+        <para></para>
+      </section>
+    </chapter>
+
+    <chapter id="sec.WebAppDeployment">
+      <title>Web App Deployment</title>
+
+      <para></para>
+
+      <para></para>
+
+      <para></para>
+
+      <sect1>
+        <title>Setting up Security</title>
+
+        <para></para>
+
+        <para></para>
+
+        <para></para>
+      </sect1>
+
+      <sect1>
+        <title>Building a Regular Webapp</title>
+
+        <para></para>
+
+        <para>The final mechanism is to use Maven to package up the webapp
+        project as a WAR file, packaging up whatever is in the web.xml file.
+        As above, ordinarily the web.xml will be configured to run the same
+        HTML viewer, so the end result will be the same. However, if necessary
+        the remoting servlet can also be configured</para>
+
+        <para>Packaging up is done using:</para>
+
+        <screen format="linespecific">$ cd viewer-xxx
+$ mvn clean package</screen>
+
+        <para>where viewer-xxx is the module containing the WEB-INF.</para>
+
+        <para></para>
+
+        <para>This should result in a WAR file in <filename>target</filename>
+        directory. This can be deployed to an existing servlet
+        containerd</para>
+
+        <para></para>
+
+        <para></para>
+
+        <para></para>
+
+        <para></para>
+      </sect1>
+
+      <sect1>
+        <title>Deploying Client/Server (with encoding-http)</title>
+
+        <para></para>
+
+        <para></para>
+      </sect1>
+    </chapter>
+  </part>
+
+  <part id="prt.ContributorsGuide">
+    <title>Contributors Guide</title>
+
+    <partintro>
+      <para>The part of the guide is written for <emphasis>Isis</emphasis>
+      contributors who wish to understand the implementation of the default
+      runtime in order to enhance/improve/fix it.</para>
+
+      <para>The chapters in this part of the guide:</para>
+
+      <itemizedlist>
+        <listitem>
+          <para>outlines the core concepts within the <emphasis>default
+          runtime</emphasis>.</para>
+        </listitem>
+
+        <listitem>
+          <para>describe the purpose and major classes of each of the default
+          runtime modules.</para>
+        </listitem>
+      </itemizedlist>
+
+      <para></para>
+    </partintro>
+
+    <chapter>
+      <title>Core Concepts</title>
+
+      <abstract>
+        <para>The core concepts that make up the default runtime
+        implementation.</para>
+      </abstract>
+
+      <para>The role of the runtime component within <emphasis>Isis</emphasis>
+      is to bootstrap the application and components, and to manage the
+      lifecycle of domain object entities. Typically, this means managing
+      their persistence and identity. The default runtime implementation
+      <package>[oai.runtimes:dflt]</package> provides support for this, and
+      additionally provides support for client/server remoting and also the
+      concept of a profilestore.</para>
+
+      <para>Because the scope of the <emphasis>default runtime</emphasis>
+      includes remoting, it necessarily adds a degree of abstraction that,
+      perhaps, might not otherwise be required. This chapter explains the main
+      concepts defined or implemented by the <emphasis>default
+      runtime</emphasis>.</para>
+
+      <para>This chapter should help you understand better how the default
+      runtime works. If you just want to use the</para>
+
+      <sect1>
+        <title>Components of the Core Runtime</title>
+
+        <para>As will be clear if you've explored the codebase, the
+        <emphasis>core runtime</emphasis> implementation consists of a main
+        <emphasis>runtime</emphasis>
+        module<package>[oai.core:runtime]</package> along with a
+        fairly large number of components.</para>
+
+        <para>The main <emphasis>runtime</emphasis> module provides the
+        following functionality:</para>
+
+        <itemizedlist>
+          <listitem>
+            <para>classes to bootstrap the core runtime</para>
+          </listitem>
+
+          <listitem>
+            <para>the "installer" registry; a repository of components that
+            can be bootstrapped</para>
+          </listitem>
+
+          <listitem>
+            <para>implementations of the
+            <classname>AuthenticationManager</classname> and
+            <classname>AuthorizationFacetFactory</classname> interfaces for
+            the default runtime</para>
+          </listitem>
+
+          <listitem>
+            <para>an abstract <classname>PersistenceSession</classname>
+            <acronym>API</acronym> that provides a very generalized means for
+            managing the lifecycle of domain objects</para>
+
+            <para>This includes an <classname>ObjectFactory</classname> API
+            which (in conjunction with the
+            <classname>ClassSubstitor</classname> interface defined in the
+            <package>[oai.core:metamodel]</package> module) provides hook-in
+            points for bytecode enhancement libraries (discussed further
+            below);</para>
+          </listitem>
+
+          <listitem>
+            <para>an implementation of the
+            <classname>PersistenceSession</classname> <acronym>API</acronym>
+            which does some of the common work for persistence management and
+            defines its own object store <acronym>API</acronym></para>
+          </listitem>
+
+          <listitem>
+            <para>a mechanism to define the set of application domain services
+            to make available to the domain objects</para>
+          </listitem>
+
+          <listitem>
+            <para>a mechanism to define the set of fixtures to automatically
+            install into the object store (for use when testing or
+            prototyping)</para>
+          </listitem>
+
+          <listitem>
+            <para>a mechanism (<classname>Memento</classname>) for capturing
+            the state of domain objects over time</para>
+          </listitem>
+
+          <listitem>
+            <para>support for more easily building <acronym>XML</acronym>
+            snapshots (using the
+            <classname>oai.applib.snapshot.Snapshottable</classname>
+            interface)</para>
+          </listitem>
+
+          <listitem>
+            <para>a means of storing user preference / profile information
+            (including, for example, bookmarks to objects).</para>
+          </listitem>
+        </itemizedlist>
+
+        <para>The rest of the <emphasis>default runtime</emphasis>
+        (sub)modules provide implementations of the major
+        <acronym>API</acronym>s that the <emphasis>default runtime</emphasis>
+        exposes:</para>
+
+        <itemizedlist>
+          <listitem>
+            <para>object store</para>
+
+            <para>The object store <acronym>API</acronym> defines a
+            persistence mechanism for storing domain objects. Examples include
+            a simple in-memory object store (useful only for prototyping), an
+            <acronym>XML</acronym> objectstore, a simple
+            <acronym>SQL</acronym> objectstore, and a "NoSQL" (JSON-based)
+            objectstore.</para>
+          </listitem>
+
+          <listitem>
+            <para>bytecode enhancement</para>
+
+            <para>Bytecode enhancement classes provide the ability to support
+            lazy loading while walking a graph from one domain object to
+            another, using tools such as <ulink
+            url="http://cglib.sourceforge.net">cglib</ulink> or <ulink
+            url="http://www.javassist.org">javassist</ulink>. This is a
+            similar technique to that employed by <acronym>ORM</acronym>s, but
+            is available even if the object store involved does not support
+            lazy loading.<footnote>
+                <para>Indeed, ORM-based object stores (are likely to) require
+                the bytecode providers to be disabled.</para>
+              </footnote></para>
+
+            <para>The bytecode enhancement is also used for automatic tracking
+            of dirty objects (so that Isis knows to flush them to the object
+            store at the end of the transaction). The primary
+            <acronym>API</acronym> that supports bytecode enhancement is
+            <classname>ObjectFactory</classname>, discussed in <xref
+            linkend="sec.SessionLevelScope" />.</para>
+          </listitem>
+
+          <listitem>
+            <para>profile store</para>
+
+            <para>The profile store <acronym>API</acronym> defines a
+            persistence mechanism for storing user profile information.
+            Examples include a simple in-memory profile store (useful only for
+            prototyping and testing), and an <acronym>XML</acronym>
+            profilestore.</para>
+          </listitem>
+
+          <listitem>
+            <para>client/server remoting support</para>
+
+            <para>The <emphasis>default runtime</emphasis> also provides
+            support for client/server remoting, through an alternative
+            implementation of the <classname>PersistenceSession</classname>
+            <acronym>API</acronym><footnote>
+                <para>Alternative, that is, to the
+                <classname>PersistenceSession</classname> implementation for
+                object stores.</para>
+              </footnote>.</para>
+
+            <para>For example, the DnD viewer can be configured to act as a
+            client, holding a cache of domain objects client-side.
+            Interactions with these domain objects are sent transparently
+            across to a server running the same application domain classes;
+            the changes are performed server-side and the results sent back
+            down to the client where the results are merged.</para>
+          </listitem>
+        </itemizedlist>
+
+        <para>In addition, because many of the <emphasis>Isis</emphasis>
+        viewers are webapps, the <emphasis>default runtime</emphasis> also
+        has:</para>
+
+        <itemizedlist>
+          <listitem>
+            <para>a module <package>[oai.core:isis-core-runtime]</package> with
+            <classname>ServletContextListener</classname> and
+            <classname>javax.servlet.Filter</classname> implementations to
+            allow <emphasis>Isis</emphasis> to be bootstrapped from a
+            webapp</para>
+          </listitem>
+
+          <listitem>
+            <para>provides a convenience module
+            <package>[oai.core:isis-core-webserver]</package> that provides a
+            command-line utility to allow any Maven webapp-structured project
+            to be hosted within Jetty.</para>
+          </listitem>
+        </itemizedlist>
+      </sect1>
+
+      <sect1 id="sec.InstallerLookup">
+        <title><classname>InstallerLookup</classname> and
+        <filename>installer-registry.properties</filename></title>
+
+        <para>The <emphasis>Isis</emphasis> core modules
+        <package>[oai:core]</package> already provide the
+        <classname>oai.core.commons.components.Installer</classname> interface
+        which defines a factory interface for any component within
+        <emphasis>Isis</emphasis>.</para>
+
+        <para>The <emphasis>default runtime</emphasis> builds upon this
+        infrastructure by providing the <classname>InstallerLookup</classname>
+        interface (in
+        <package>oai.runtimes.dflt.runtime.installerregistry</package>) to act
+        as a registry of all available <classname>Installer</classname>s that
+        have been bootstrapped. It also provides an implementation,
+        <classname>InstallerLookupDefault</classname>, which looks up the
+        implementations from the
+        <filename>installer-registry.properties</filename> file. This registry
+        file can be found in <package>oai.runtimes.dflt.runtime</package>
+        package. If no implementation is specified, then a default (defined in
+        <package>oai.runtimes.dflt.runtime.system.SystemConstants</package>)
+        is used. For some components the specified
+        <classname>DeploymentType</classname> will cause the default to vary;
+        for example, the default persistence mechanism when running in
+        exploration mode is to use the in-memory object store; otherwise
+        though the XML object store is defaulted.</para>
+
+        <para>In addition to loading components, the
+        <classname>InstallerLookupDefault</classname> also updates the
+        (mutable) <classname>IsisConfigurationBuilder</classname>, from which
+        an <classname>IsisConfiguration</classname> is snapshotted. It does
+        this by asking each <classname>Installer</classname> for its
+        configuration files
+        (<methodname>Installer#getConfigurationResources()</methodname>). For
+        those installers that inherit from
+        <classname>oai.core.commons.config.InstallerAbstract</classname> (ie
+        most if not all of them), this returns a collection of two file names
+        that follow the convention:</para>
+
+        <itemizedlist>
+          <listitem>
+            <para><filename>type.properties</filename></para>
+          </listitem>
+
+          <listitem>
+            <para><filename>type_name.properties</filename></para>
+          </listitem>
+        </itemizedlist>
+
+        <para>For example, if loading the XML persistence mechanism/object
+        store this will search for <filename>persistor.properties</filename>
+        and then <filename>persistor_xml.properties</filename>.</para>
+
+        <para>It's worth pointing out that
+        <classname>InstallerLookupDefault</classname> is, in turn, defaulted
+        from <classname>IsisModule</classname>. This is an implementation if a
+        <classname>com.google.inject.Module</classname>, meaning that
+        <emphasis>Isis</emphasis> is, in fact, ultimately bootstrapped by
+        <ulink url="http://code.google.com/p/google-guice/">Google
+        Guice</ulink><footnote>
+            <para>At least, when the <emphasis>default runtime</emphasis> is
+            used.</para>
+          </footnote>.</para>
+      </sect1>
+
+      <sect1>
+        <title>Component Scopes</title>
+
+        <para>The components loaded by <classname>InstallerLookup</classname>
+        are thread-safe singletons with application (global) scope. From them
+        the <emphasis>Isis</emphasis> runtime instantiates further components
+        at session, and within that transaction-level scope. This is shown
+        below:</para>
+
+        <mediaobject>
+          <imageobject>
+            <imagedata fileref="images/architecture.png" scale="45" />
+          </imageobject>
+        </mediaobject>
+
+        <para>For webapp-based viewers, an <classname>IsisSession</classname>
+        is instantiated at the beginning of the HTTP request, and is
+        automatically closed at the end of the request. In this regard it is
+        very similar to the concept of a <acronym>JPA
+        </acronym><classname>javax.persistence.PersistenceContext</classname>
+        or <ulink url="http://hibernate.org">Hibernate</ulink>
+        <classname>org.hibernate.Session</classname>.</para>
+
+        <para>For client/server deployments, an
+        <classname>IsisSession</classname> is similar for the server, but for
+        the client an <classname>IsisSession</classname> is started when the
+        user starts the client, and is only closed when the user quits
+        out.<footnote>
+            <para>There are, arguably, some issues with this design. In the
+            future we may deprecate this design in favour of a design of
+            client that is wholly stateless.</para>
+          </footnote></para>
+
+        <para>As the diagram illustrates, an
+        <classname>IsisSession</classname> can give rise to one or multiple
+        <classname>IsisTransaction</classname>s. If running within a webapp or
+        the server-side of a client/server remoting, each
+        <classname>IsisSession</classname> will instantiate precisely one
+        <classname>IsisTransaction</classname>, automatically begun at the
+        beginning of the session and committed at the end. On the client-side
+        of a client/server deployment, an
+        <classname>IsisTransaction</classname> is created for each
+        client/server interaction.</para>
+
+        <para>The following look at the role of each of the components shown,
+        in each scope.</para>
+
+        <sect2>
+          <title>Application-level scope</title>
+
+          <para>The <classname>IsisSystem</classname> is the top-level object
+          that represents the running <emphasis>Isis</emphasis> instance.
+          Within this top-level object are a number of subsidiary
+          objects:</para>
+
+          <itemizedlist>
+            <listitem>
+              <para>the <classname>DeploymentType</classname> is used to
+              categorise the "mode" in which <emphasis>Isis</emphasis> is
+              being used. This combines two different dimensions: whether
+              <emphasis>Isis</emphasis> is running in a server (multiuser) or
+              client context, and whether it is running in
+              exploration/prototyping/production. The
+              <classname>DeploymentType</classname> in effect can influence
+              which implementation of components are created (see <xref
+              linkend="sec.InstallerLookup" />).</para>
+            </listitem>
+
+            <listitem>
+              <para>the <classname>IsisConfiguration</classname> is the final
+              configuration after all components have been
+              loaded;eLoade</para>
+            </listitem>
+
+            <listitem>
+              <para>the <classname>IsisSessionFactory</classname> is used to
+              create <classname>IsisSession</classname>s as required (more on
+              this below)</para>
+            </listitem>
+
+            <listitem>
+              <para>the <classname>LogonFixture</classname> allows automatic
+              logon if running with a test/exploration mode
+              (<classname>DeploymentType</classname>)</para>
+            </listitem>
+          </itemizedlist>
+
+          <para>Of the above top-level objects, the
+          <classname>IsisSessionFactory</classname> is by far the most
+          important, because it is responsible for creating
+          <classname>IsisSession</classname>s as and when required. There are
+          several elements to an <classname>IsisSession</classname>, and so
+          <classname>IsisSessionFactory</classname> delegates the
+          instantiation of these elements to its own subsidiary
+          objects:</para>
+
+          <itemizedlist>
+            <listitem>
+              <para>The <classname>AuthenticationManager</classname> is used
+              for authenticated users into the system, and is used to
+              instantiate an <classname>AuthenticationSession</classname>.
+              This is discussed further in <xref
+              linkend="sec.SessionLevelScope" />.</para>
+            </listitem>
+
+            <listitem>
+              <para>The <classname>PersistenceSessionFactory</classname> is
+              used to instantiate the corresponding
+              <classname>PersistenceSession</classname>. This is discussed
+              further in <xref linkend="sec.SessionLevelScope" />.</para>
+            </listitem>
+          </itemizedlist>
+
+          <para>In addition, the <classname>IsisSessionFactory</classname>
+          holds references to a number of other top-evel components, namely
+          <classname>AuthorizationManager</classname>, the
+          <classname>SpecificationLoader</classname> (ie the Isis metamodel),
+          the <classname>TemplateImageLoader</classname> (for loading
+          images/icons) and the <classname>UserProfileLoader</classname>
+          (responsible for interacting with the profile store
+          component).</para>
+        </sect2>
+
+        <sect2 id="sec.SessionLevelScope">
+          <title>Session-level scope</title>
+
+          <para>The <classname>AuthenticationSession</classname> holds the
+          credentials (basically: username and roles) of the user that is
+          currently (ie with respect to the current
+          <classname>IsisContext</classname>) interacting with
+          <emphasis>Isis</emphasis>. In principal this information could
+          change over time; for example a user might be added or removed from
+          roles.</para>
+
+          <para>The <classname>PersistenceSession</classname>, on the other
+          hand, is a somewhat more complex beast, consisting in turn
+          of:</para>
+
+          <itemizedlist>
+            <listitem>
+              <para><classname>IsisTransactionManager</classname>, which is
+              responsible for managing <classname>IsisTransaction</classname>s
+              within the persistence session.</para>
+
+              <para>As mentioned above, when running as a webapp there is
+              precisely one <classname>IsisTransaction</classname> per
+              session, however when running as a client in client/server mode
+              there may be many transactions per session.</para>
+            </listitem>
+
+            <listitem>
+              <para><classname>ServicesInjector</classname>, which is
+              responsible for injecting domain services into each domain
+              object as it is instantiated.</para>
+
+              <para>Services are discussed further in <xref
+              linkend="sec.DomainServices" />.</para>
+            </listitem>
+
+            <listitem>
+              <para><classname>PojoAdapterFactory</classname>, which is an
+              implementation of the
+              <classname>oai.core.metamodel.adapter.ObjectAdapterFactory</classname>
+              <acronym>API</acronym>.</para>
+
+              <para>The default implementation instantiates
+              <classname>PojoAdapter</classname> as the corresponding
+              implementation of
+              <classname>oai.core.metamodel.adapter.ObjectAdapter</classname>.
+              There is further coverage of
+              <classname>ObjectAdapter</classname>s in <xref
+              linkend="sec.ObjectLifecycleManagement" />.</para>
+
+              <para>In principle this is an extension point; the
+              <emphasis>default runtime</emphasis> could be extended to
+              provide different implementations of
+              <classname>ObjectAdapterFactory</classname>. for example to
+              provide more extensive binding support for certain viewers, or
+              to provide a fine-grained notifications of changes to underlying
+              objects.</para>
+            </listitem>
+
+            <listitem>
+              <para><classname>ObjectFactory</classname>, which provides
+              different implementations for instantiating domain object
+              pojos.</para>
+
+              <para>This is the primary <acronym>API</acronym> that enables
+              lazy-loading and automatic tracking of dirty objects.
+              Specifically, the <classname>ObjectFactory</classname>
+              <acronym>API</acronym> is implemented to allow the bytecode
+              implementation to instantiate objects (they provide custom
+              subclasses which act as wrappers around the underlying
+              object).</para>
+
+              <para>In addition, the <classname>ClassSubstitutor</classname>
+              <acronym>API</acronym> should also be implemented; this allows
+              the metamodel to walk the graph ignoring the custom
+              subclasses.</para>
+            </listitem>
+
+            <listitem>
+              <para><classname>OidGenerator</classname>, which provides an
+              <acronym>API</acronym> to generate unique
+              <classname>Oid</classname>s (object identifiers) for each
+              persistent instance.</para>
+
+              <para>You can think of the <classname>OidGenerator</classname>
+              as a generalization of the automatic generation of primary keys
+              for entities (using a SQL Server <code>identity</code> keyword
+              or Oracle SEQUENCE). However, whereas a primary key id only
+              relates to persisted objects, <emphasis>Isis</emphasis>'
+              <emphasis>default runtime</emphasis> also allows
+              <classname>Oid</classname>s to be created for still-transient
+              objects. Because such objects may later be persisted, this
+              meanst that the value of the <classname>Oid</classname> can
+              change at this point. <emphasis>Isis</emphasis> automatically
+              manages this transition.</para>
+
+              <para><classname>OidGenerator</classname>s are also required to
+              return an <classname>OidStringifier</classname>, which is
+              capable of returning a string representation of the
+              <classname>Oid</classname>. This capability is exploited by some
+              viewers, such as the Restful viewer
+              <package>[oai.viewer:restful]</package>, where string
+              representations of <classname>Oid</classname>s are required.
+              Some <classname>Oid</classname> implementations can choose to
+              implement the <classname>DirectlyStringableOid</classname>
+              sub-interface, so can be serialized and deserialized into
+              strings very directly. Other implementations may rely on the
+              fact that all <classname>Oid</classname>s are also
+              <classname>oai.core.commons.encoding.Encodable</classname>. The
+              string representation for such Oids will however be rather long
+              and opaque.</para>
+            </listitem>
+
+            <listitem>
+              <para><classname>AdapterManager</classname>, which is
+              responsible for tracking the associations between domain object
+              pojos, <classname>ObjectAdapter</classname>s and
+              <classname>Oid</classname>s.</para>
+
+              <para>This, too, is discussed fruther in <xref
+              linkend="sec.ObjectLifecycleManagement" />.</para>
+            </listitem>
+          </itemizedlist>
+
+          <para>The final scope is for transactions that are created within an
+          session.</para>
+        </sect2>
+
+        <sect2 id="sec.TransactionLevelScope">
+          <title>Transaction-level scope</title>
+
+          <para>The <classname>IsisTransactionManager</classname> (referenced
+          by <classname>PersistenceSession</classname>) is responsible for
+          creating an <classname>IsisTransaction</classname>. The
+          implementation used depends on the
+          <classname>PersistenceSession</classname>, but for the more common
+          case, object stores, the implementation that is used is
+          <classname>ObjectStoreTransaction</classname>. This in turn holds a
+          collection of <classname>PersistenceCommand</classname>s which
+          represent instructions to add, update or delete objects as required.
+          When the transaction is committed, each of these
+          <classname>PersistenceCommand</classname>s is executed by the
+          configured object store.</para>
+
+          <para>In addition to the commands, the IsisTransaction also holds
+          two further sub-components:</para>
+
+          <itemizedlist>
+            <listitem>
+              <para>the <classname>UpdateNotifier</classname> is used to
+              capture the list of objects that have been added, updated or
+              deleted (disposed of). This can be queried by other components
+              (such as viewers) as necessary (for example, to know which
+              objects to repaint).</para>
+
+              <para>Once changes are retrieved by client the notifier resets
+              its collection so that changes are only available once.</para>
+            </listitem>
+
+            <listitem>
+              <para>the <classname>MessageBroker</classname> is used to
+              capture any messages, warnings, or errors that either the system
+              or the domain objects themselves have raised.</para>
+
+              <para>Domain objects can raise messages using the
+              <classname>oai.applib.DomainObjectContainer</classname>,
+              automatically injected into all domain objects. The system may
+              raise messages if, for example, a concurrency exception
+              occurs.</para>
+            </listitem>
+          </itemizedlist>
+
+          <para>In general it is invalid to access an object from any scope
+          once it has been closed. So, for example, the behaviour of the
+          <classname>AdapterManager</classname> of a
+          <classname>PersistenceSession</classname> is undefined once its
+          owning <classname>PersistenceSession</classname> is closed. The
+          exception to this rule is the <classname>UpdateNotifier</classname>
+          and <classname>MessageBroker</classname>. Other components in the
+          framework are free to access these even after the transaction has
+          completed, for example in order to repaint the view. See <xref
+          linkend="sec.IsisContext" /> for details on how to obtain these
+          components and any others.</para>
+        </sect2>
+      </sect1>
+
+      <sect1 id="sec.IsisContext">
+        <title>Service Locator (<classname>IsisContext</classname>) and
+        <classname>DeploymentType</classname>s</title>
+
+        <para>The <emphasis>default runtime</emphasis> uses the service
+        locator pattern to make components (of different scopes) available.
+        This is implemented through the <classname>IsisContext</classname>
+        class.</para>
+
+        <para><classname>IsisContext</classname> itself is abstract; concrete
+        subclasses take responsibility for binding the services as
+        appropriate. For example, the default implementation for server-side
+        deployments is to use the
+        <classname>IsisContextThreadLocal</classname>, which (as might be
+        expected) binds the <classname>IsisContext</classname> singleton to
+        thread-local storage. This is, however, pluggable; the Wicket viewer
+        <package>[oai.viewer:wicket]</package> for example provides its own
+        implementation <classname>IsisContextForWicket</classname>, which
+        binds the IsisContext to an <ulink
+        url="http://wicket.apache.org">Apache Wicket</ulink>
+        <classname>org.apache.wicket.Session</classname>.</para>
+
+        <para>As noted above, in general it is invalid to access an object
+        from any scope once it has been closed; an
+        <classname>IllegalStateException</classname> will be thrown
+        otherwise.</para>
+
+        <para></para>
+
+        <para>*** TODO: discuss DeploymentType and ContextCategory</para>
+
+        <para></para>
+
+        <para></para>
+      </sect1>
+
+      <sect1 id="sec.ObjectLifecycleManagement">
+        <title>Object Lifecycle Management</title>
+
+        <para>Managing the lifecycle of domain objects is one of the major
+        responsibilities of the <emphasis>default runtime</emphasis>. Most of
+        the work goes on in the <classname>PersistenceSession</classname>
+        component, discussed earlier in <xref
+        linkend="sec.SessionLevelScope" />. In this section we dig a little
+        deeper into some of the internals of this component.</para>
+
+        <sect2>
+          <title><classname>ObjectAdapter</classname>s and
+          <classname>Oid</classname>s</title>
+
+          <para><emphasis>Apache Isis</emphasis> components do not deal
+          directly with domain object pojos; instead they are always wrapped
+          by an adapter, call <classname>ObjectAdapter</classname>. This has
+          two main responsibilities:</para>
+
+          <itemizedlist>
+            <listitem>
+              <para>it provides reference to the
+              <classname>ObjectSpecification</classname>, which describes the
+              structure (properties, collections, actions) of the object's
+              type</para>
+            </listitem>
+
+            <listitem>
+              <para>it provides reference to an <classname>Oid</classname>,
+              which is an opaque value that uniquely identifies the object
+              instance.</para>
+            </listitem>
+          </itemizedlist>
+
+          <para>You can think of <classname>ObjectAdapter</classname> as
+          equivalent to <classname>java.lang.Object</classname>, while
+          <classname>ObjectSpecification</classname> is in some sense
+          equivalent to <classname>java.lang.Class</classname>. The
+          <classname>Oid</classname> interface meanwhile is something akin to
+          a primary key identifier for an row in a relational database, but it
+          is slightly more abstract than that because it can also represent a
+          non-persisted object.</para>
+
+          <para>It is the <emphasis>metamodel</emphasis> module of
+          <emphasis>Isis</emphasis> <package>[oai.core:metamodel]</package>
+          defines these interfaces (<classname>ObjectAdapter,
+          ObjectSpecifation</classname> and <classname>Oid</classname>), the
+          object itself (<classname>ObjectAdapter</classname>), and the
+          object's identity (<classname>Oid</classname>). The metamodel itself
+          also provides an implementation of
+          <classname>ObjectSpecification</classname>.</para>
+
+          <para>The <emphasis>default runtime</emphasis> module
+          <package>[oai.runtimes:dflt]</package> provides an implementations
+          of the <classname>ObjectAdapter</classname> interface
+          (<classname>oai.runtimes.dflt.persistence.adapterfactory.pojo.PojoAdapter</classname>)
+          as well as an implementation of the <classname>Oid</classname>
+          interface. The actual implementation of <classname>Oid</classname>
+          will depend on the object store (persistence) mechanism that the
+          runtime has been configured to use.</para>
+        </sect2>
+
+        <sect2>
+          <title><classname>AdapterManager</classname></title>
+
+          <para>As already mentioned, the <classname>ObjectAdapter</classname>
+          maintains a reference to an <classname>Oid</classname> and the
+          underlying pojo domain object. To traverse in the other direction -
+          that is, from <classname>Oid</classname> to
+          <classname>ObjectAdapter</classname> or from pojo to
+          <classname>ObjectAdapter</classname> - the default runtime uses its
+          internal <classname>AdapterManager</classname> component, which
+          maintains two sets of maps. This is shown below:</para>
+
+          <mediaobject>
+            <imageobject>
+              <imagedata fileref="images/adapter-manager.png" scale="45" />
+            </imageobject>
+          </mediaobject>
+
+          <para>The <classname>AdapterManager</classname> is an example of the
+          <ulink
+          url="http://martinfowler.com/eaaCatalog/identityMap.html">object-identity
+          map pattern</ulink> (as documented more fully in Martin Fowler's
+          Patterns of Enterprise Application Architecture). Whenever a domain
+          object pojo is handled by the system, and before an adapter for it
+          has been created, the runtime checks the
+          <classname>AdapterManager</classname> for the instance first, and
+          only creates an adapter if the pojo is not mapped. Similarly, if the
+          adapter has only an <classname>Oid</classname> value then the
+          <classname>AdapterManager</classname> is determine if the object's
+          adapter exists.</para>
+
+          <para>For value types (such as <classname>String</classname> or
+          <classname>java.math.BigDecimal</classname>), things are a little
+          different. All values <emphasis>do</emphasis> still have an
+          associated <classname>ObjectAdapter</classname>, however the
+          <classname>Oid</classname> of these is null, and these objects are
+          not stored within the <classname>AdapterManager</classname> maps. A
+          value is any object whose <classname>ObjectSpecification</classname>
+          has a <classname>ValueFacet</classname> associated with it.
+          Typically this is as a result of it have the
+          <classname>@Value</classname> annotation; or it might be one of the
+          built-in types supported by <emphasis>Isis</emphasis> (such as
+          <classname>String</classname>).</para>
+        </sect2>
+
+        <sect2>
+          <title>Aggregate roots and <classname>Oid</classname>
+          subtypes</title>
+
+          <para>Whereas value types have no <classname>Oid</classname>, all
+          other domain objects do:</para>
+
+          <itemizedlist>
+            <listitem>
+              <para>Most domain objects that have an
+              <classname>Oid</classname> will be domain entities that,
+              moreover, are aggregate roots. That is, these are entities that
+              are intended to be directly referenced from other entities, and
+              have their own, independent identity.</para>
+
+              <para>For example, a <classname>Customer</classname>,
+              <classname>Product</classname> and <classname>Order</classname>
+              are all likely to be aggregate root entities.</para>
+            </listitem>
+
+            <listitem>
+              <para>Lists or sets also have an
+              <classname>Oid</classname>.</para>
+
+              <para>For example, the <classname>List&lt;Order&gt;</classname>
+              held internally by a <classname>Customer</classname> to
+              represent its list of <classname>Order</classname>s will be
+              wrapped in an <classname>ObjectAdapter</classname> and have its
+              own <classname>Oid</classname>. Moreover, this
+              <classname>ObjectAdapter</classname> will be able to track
+              whether the list has been populated from the persistence
+              mechanism (so that the collection can be lazily loaded if
+              required).</para>
+
+              <para>However, such internal lists do not exist outside of their
+              owning entity, so these are considered "aggregated" by that
+              owning entity. The <classname>Oid</classname> of such objects is
+              an instance of type <classname>AggregatedOid</classname>, which
+              is basically the <classname>Oid</classname> of its owning entity
+              along with an Id for the collection of the object member in
+              question (eg "orders").</para>
+            </listitem>
+
+            <listitem>
+              <para>Entities can also be aggregated.</para>
+
+              <para>If an entity type is annotated with
+              <classname>@Aggregated</classname>, then it means that all
+              instances of that type are considered as non-root aggregated
+              entities, and will also be identified using an
+              <classname>AggregatedOid</classname>.</para>
+
+              <para>For example, <classname>OrderItem</classname> might be
+              considered an aggregate type (within its aggregate root,
+              <classname>Order</classname>).</para>
+            </listitem>
+          </itemizedlist>
+
+          <para>Marking an entity as aggregated may or may not impact how it
+          is persisted. For example, an XML or No-SQL (JSON-based) object
+          store might conceivably inline the persisted representation of the
+          aggregated entity within the document representing the aggregate
+          root. An RDBMS-based object store, on the other hand, might choose
+          to simply persist every entity in its own table (meaning that the
+          distinction between aggregate root entities vs aggregated entities
+          is less obvious).</para>
+
+          <para>For aggregate root entities, the actual
+          <classname>Oid</classname> implementation depends upon the
+          configured persistence mechanism. For example, if using the XML
+          object store then the <classname>SerialOid</classname>
+          implementation is used, with the
+          <classname>TimeBasedOidGenerator</classname> being used as the
+          <classname>OidGenerator</classname> (in other words, creating unique
+          instances based on the current time). On the other hand the SQL
+          object store happens to have its own <classname>SqlOid</classname>
+          implementation, which captures the value generated by the underlying
+          relational database.</para>
+        </sect2>
+
+        <sect2 id="sec.DomainServices">
+          <title>Domain Services</title>
+
+          <para>One of the responsibilities of the
+          <classname>IsisSystem</classname> is to obtain the list of domain
+          services that will be made available to the end-user and which are
+          automatically injected into the domain objects.</para>
+
+          <para>The default implementation is to load from the
+          <filename>isis.properties</filename> file, under the
+          <varname>isis.services.prefix</varname> and
+          <varname>isis.services</varname> keys:</para>
+
+          <programlisting>isis.services.prefix = org.apache.isis.example.claims.objstore.dflt
+isis.services = employee.EmployeeRepositoryDefault, claim.ClaimRepositoryDefault</programlisting>
+
+          <para>For each domain service class, a corresponding domain object
+          is instantiated, and then these are held as a simple list within
+          IsisSystem.</para>
+
+          <para>When a <classname>PersistenceSession</classname> is created,
+          all domain objects must be mapped with
+          <classname>ObjectAdapter</classname>s. Because domain services are
+          injected into domain objects, this applies to the domain objects too
+          (otherwise the domain objects would appear to hold an unknown
+          object).</para>
+
+          <para>Moreover, it is not valid for persisted domain objects to hold
+          references to non-persisted domain objects. We therefore "fool" the
+          rest of the framework by automatically creating and mapping
+          <classname>ObjectAdapter</classname>s for all the domain services
+          objects, with each set to being already persistent. The scope of
+          these <classname>ObjectAdapter</classname>s is the same as for any
+          other adapter within the <classname>PersistenceSession</classname>;
+          only as long as the <classname>PersistenceSession</classname> is
+          still open. When the subsequent
+          <classname>PersistenceSession</classname> is created,
+          <classname>ObjectAdapter</classname>s are created a-new for each
+          domain service.</para>
+        </sect2>
+      </sect1>
+    </chapter>
+
+    <chapter>
+      <title>Runtime Module</title>
+
+      <abstract>
+        <para>A run through of the main packages and classes that make up the
+        runtime module.</para>
+      </abstract>
+
+      <para>The runtime module <package>[oai.core:isis-core-runtime]</package>
+      is the "engine-room" of the default runtime, taking responsibility to
+      manage domain object (pojo) instances at runtime:</para>
+
+      <itemizedlist>
+        <listitem>
+          <para>Each pojo is wrapped in an
+          <classname>ObjectAdapter</classname> (cf
+          <classname>java.lang.Object</classname>) from which the
+          <classname>ObjectSpecification</classname> (cf
+          <classname>java.lang.Class</classname>) can be obtained.</para>
+        </listitem>
+
+        <listitem>
+          <para>Associated with each <classname>ObjectAdapter</classname> is
+          an <classname>Oid</classname>: an opaque serializable identifier to
+          the object. The <emphasis>runtime</emphasis> module maintains a
+          3-way identity map between these, allowing forward and reverse
+          lookups (<classname>AdapterManager</classname>).</para>
+        </listitem>
+      </itemizedlist>
+
+      <para>The runtime module also defines a number of APIs:</para>
+
+      <itemizedlist>
+        <listitem>
+          <para>the most important such API is the
+          <classname>ObjectStore</classname> API. The
+          <emphasis>runtime</emphasis> module manages persistence and
+          transaction demarcation, with the actual storage of objects being
+          delegated to an object store implementation.</para>
+        </listitem>
+
+        <listitem>
+          <para>the other major API defined by the runtime module security
+          API, dealing with authentication and authorization.</para>
+        </listitem>
+      </itemizedlist>
+
+      <para>In addition to all the above, the <emphasis>runtime</emphasis>
+      module defines a command-line bootstrapper, making it easy to bootstrap
+      Apache Isis from a main() or a JUnit test case.</para>
+
+      <sect1>
+        <title>Package Layering / Dependencies</title>
+
+        <para>The packages that reside within the <emphasis>runtime</emphasis>
+        have break into the following layers (top layer packages depending on
+        lower layers):</para>
+
+        <mediaobject>
+          <imageobject>
+            <imagedata fileref="images/runtime/architectural-layers.png"
+                       scale="70" />
+          </imageobject>
+        </mediaobject>
+
+        <para>Alternatively, we can see the actual dependencies:</para>
+
+        <mediaobject>
+          <imageobject>
+            <imagedata fileref="images/runtime/package-dependencies.png"
+                       scale="50" />
+          </imageobject>
+        </mediaobject>
+
+        <para>With one minor exception, there are no cycles between
+        packages.</para>
+      </sect1>
+
+      <sect1>
+        <title>Runtime, Runner, Installers</title>
+
+        <para></para>
+
+        <para></para>
+
+        <mediaobject>
+          <imageobject>
+            <imagedata fileref="images/runtime/architectural-layers-1.png"
+                       scale="70" />
+          </imageobject>
+        </mediaobject>
+
+        <para></para>
+
+        <para></para>
+
+        <para></para>
+      </sect1>
+
+      <sect1>
+        <title>SystemUsingInstallers, and InstallerRegistry</title>
+
+        <para></para>
+
+        <para></para>
+
+        <mediaobject>
+          <imageobject>
+            <imagedata fileref="images/runtime/architectural-layers-2.png"
+                       scale="80" />
+          </imageobject>
+        </mediaobject>
+
+        <para></para>
+      </sect1>
+
+      <sect1>
+        <title>Web and Viewers</title>
+
+        <para></para>
+
+        <para></para>
+
+        <mediaobject>
+          <imageobject>
+          

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