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Posted to github@beam.apache.org by GitBox <gi...@apache.org> on 2022/06/09 20:47:33 UTC

[GitHub] [beam] lnogueir commented on a diff in pull request #17803: [BEAM-14532] Add integration testing to fhirio Read transform

lnogueir commented on code in PR #17803:
URL: https://github.com/apache/beam/pull/17803#discussion_r893940979


##########
sdks/go/test/integration/io/fhirio/fhirio_test.go:
##########
@@ -0,0 +1,198 @@
+// Licensed to the Apache Software Foundation (ASF) under one or more
+// contributor license agreements.  See the NOTICE file distributed with
+// this work for additional information regarding copyright ownership.
+// The ASF licenses this file to You under the Apache License, Version 2.0
+// (the "License"); you may not use this file except in compliance with
+// the License.  You may obtain a copy of the License at
+//
+//    http://www.apache.org/licenses/LICENSE-2.0
+//
+// Unless required by applicable law or agreed to in writing, software
+// distributed under the License is distributed on an "AS IS" BASIS,
+// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+// See the License for the specific language governing permissions and
+// limitations under the License.
+
+package fhirio
+
+import (
+	"bytes"
+	"context"
+	"crypto/rand"
+	"encoding/json"
+	"errors"
+	"flag"
+	"fmt"
+	"math/big"
+	"os"
+	"strconv"
+	"strings"
+	"testing"
+	"time"
+
+	"github.com/apache/beam/sdks/v2/go/pkg/beam"
+	"github.com/apache/beam/sdks/v2/go/pkg/beam/io/fhirio"
+	_ "github.com/apache/beam/sdks/v2/go/pkg/beam/runners/dataflow"
+	"github.com/apache/beam/sdks/v2/go/pkg/beam/testing/ptest"
+	"github.com/apache/beam/sdks/v2/go/test/integration"
+	"google.golang.org/api/healthcare/v1"
+	"google.golang.org/api/option"
+)
+
+const (
+	datasetPathFmt = "projects/%s/locations/%s/datasets/apache-beam-integration-testing"
+	testDataDir    = "../../../../data/fhir_bundles/"
+)
+
+var (
+	gcpProject             string
+	gcpRegion              string
+	storeService           *healthcare.ProjectsLocationsDatasetsFhirStoresFhirService
+	storeManagementService *healthcare.ProjectsLocationsDatasetsFhirStoresService
+)
+
+func checkFlags(t *testing.T) {
+	if gcpProject == "" || gcpRegion == "" {
+		t.Skip("GCP flags not provided.")
+	}
+}
+
+// Sets up a test fhir store by creating and populating data to it for testing
+// purposes. It returns the name of the created store path, a slice of the
+// resource paths to be used in tests, and a function to teardown what has been
+// set up.
+func setupFhirStore(t *testing.T) (string, []string, func()) {
+	t.Helper()
+	if storeService == nil || storeManagementService == nil {
+		t.Fatal("Healthcare Services were not initialized")
+	}
+
+	healthcareDataset := fmt.Sprintf(datasetPathFmt, gcpProject, gcpRegion)

Review Comment:
   Resolving this since as per chat discussion.



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