You are viewing a plain text version of this content. The canonical link for it is here.
Posted to commits@uima.apache.org by re...@apache.org on 2020/10/17 17:59:18 UTC

[uima-uimaj] branch NO-JIRA-Fix-build-on-Windows-nodes-master created (now 978e525)

This is an automated email from the ASF dual-hosted git repository.

rec pushed a change to branch NO-JIRA-Fix-build-on-Windows-nodes-master
in repository https://gitbox.apache.org/repos/asf/uima-uimaj.git.


      at 978e525  Merge branch 'master' into NO-JIRA-Fix-build-on-Windows-nodes-master

This branch includes the following new commits:

     new 978e525  Merge branch 'master' into NO-JIRA-Fix-build-on-Windows-nodes-master

The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "add" were already present in the repository and have only
been added to this reference.



[uima-uimaj] 01/01: Merge branch 'master' into NO-JIRA-Fix-build-on-Windows-nodes-master

Posted by re...@apache.org.
This is an automated email from the ASF dual-hosted git repository.

rec pushed a commit to branch NO-JIRA-Fix-build-on-Windows-nodes-master
in repository https://gitbox.apache.org/repos/asf/uima-uimaj.git

commit 978e5253a2e413f3da16fdd6af9018fb65a90dfc
Merge: 947e9b6 99d272e
Author: Richard Eckart de Castilho <re...@apache.org>
AuthorDate: Sat Oct 17 19:59:38 2020 +0200

    Merge branch 'master' into NO-JIRA-Fix-build-on-Windows-nodes-master
    
    * master: (2083 commits)
      [UIMA-6272] UIMA doesn't build on Java 14
      [UIMA-3484] Fix JavaDoc issues
      [UIMA-3484] Fix JavaDoc issues
      [UIMA-3484] Fix JavaDoc issues
      [UIMA-3484] Fix JavaDoc issues
      [UIMA-6269] select.coveredBy with includeAnnotationsWithEndBeyondBounds has broken edge case
      [UIMA-6269] select.coveredBy with includeAnnotationsWithEndBeyondBounds has broken edge case
      [UIMA-6243] JCas returns Annotation when asked for a specific subtype
      No jira: Revert switch building using Java 11 to building using Java 8. Eclipse bundles that are resolved during the build require Java 11.
      [UIMA-6259] Jenkinsfile for UIMA Java SDK
      [UIMA-6259] Jenkinsfile for UIMA Java SDK
      [UIMA-6249] avoid sync in getJCasRegisteredType
      Fix CVD makeNodes to used array length
      [UIMA-6244] change special xml chars to ones that are valid with windows
      UIMA-6199 add comment
      UIMA-6199 add comments describing meaning of length
      make forAllViews public so it can be accessed from another internl pkg
      UIMA-6199 2 part fix for edge case of non-indexed doc_annot
      [UIMA-6199] Unindexed document annotation added back to index during deserialization
      [UIMA-6199] Unindexed document annotation added back to index during deserialization
      ...

 .asf.yaml                                          |   19 +
 PearPackagingMavenPlugin/pom.xml                   |   11 +-
 README                                             |  105 +-
 RELEASE_NOTES.html                                 |   40 +-
 aggregate-uimaj-docbooks/pom.xml                   |   10 +-
 aggregate-uimaj-eclipse-plugins/pom.xml            |    9 +-
 aggregate-uimaj/pom.xml                            |   10 +-
 jVinci/pom.xml                                     |    9 +-
 .../vinci/transport/document/XMLToXTalk.java       |    9 +-
 .../transport/util/TransportableConverter.java     |   13 +-
 .../vinci/transport/vns/service/Service.java       |   10 +-
 .../transport/vns/service/ServiceRegistry.java     |    6 +-
 .../apache/vinci/transport/vns/service/VNS.java    |   15 +-
 jcasgen-maven-plugin/pom.xml                       |  221 +-
 jcasgen-maven-plugin/src/it/classpath/pom.xml      |    8 +-
 jcasgen-maven-plugin/src/it/m2e/pom.xml            |    6 +-
 .../src/it/m2e/projects/jcasgen/classpath/pom.xml  |    4 +-
 .../src/it/m2e/projects/jcasgen/crossref1/pom.xml  |    4 +-
 .../src/it/m2e/projects/jcasgen/crossref2/pom.xml  |    2 +-
 .../src/it/m2e/projects/jcasgen/simple/pom.xml     |    2 +-
 .../src/it/multimodule/crossref1/pom.xml           |    5 +-
 .../src/it/multimodule/crossref2/pom.xml           |    5 +-
 jcasgen-maven-plugin/src/it/multimodule/pom.xml    |    1 +
 jcasgen-maven-plugin/src/it/simple/pom.xml         |    5 +-
 .../uima/tools/jcasgen/maven/JCasGenMojo.java      |    2 +-
 .../uima/tools/jcasgen/maven/JCasGenMojoTest.java  |    8 +-
 pom.xml                                            |   87 +-
 src/main/analysis-of-API-changes.xlsx              |  Bin 0 -> 18906 bytes
 src/main/assembly/bin-without-jackson.xml          |   51 +-
 src/main/assembly/bin.xml                          |   50 +-
 src/main/bin_distr_license_notices/LICENSE         |  263 +
 src/main/bin_distr_license_notices/NOTICE          |   35 +
 .../NOTICE-without-jackson                         |   14 +
 src/main/license_notice_research.txt               |   39 +
 src/main/readme/LICENSE                            |  237 -
 src/main/readme/NOTICE                             |   33 -
 src/main/readme/NOTICE-without-jackson             |   12 -
 src/main/scripts/ibmUimaToApacheUima.bat           |   32 -
 src/main/scripts/ibmUimaToApacheUima.sh            |   32 -
 src/main/scripts/runUimaClass.bat                  |    2 +-
 src/main/scripts/runUimaClass.sh                   |    4 +-
 src/main/scripts/runV3migrateJCas.bat              |   29 +
 src/main/scripts/runV3migrateJCas.sh               |   26 +
 src/main/scripts/setUimaClassPath.bat              |    4 +
 src/main/scripts/setUimaClassPath.sh               |    2 +
 uima-docbook-overview-and-setup/pom.xml            |    9 +-
 .../src/docbook/conceptual_overview.xml            |   18 +-
 .../src/docbook/eclipse_setup.xml                  |   33 +-
 .../src/docbook/faqs.xml                           |   97 +-
 .../src/docbook/glossary.xml                       |   42 +-
 .../src/docbook/project_overview.xml               |  468 +-
 uima-docbook-references/pom.xml                    |    9 +-
 uima-docbook-references/src/docbook/ref.cas.xml    |  189 +-
 uima-docbook-references/src/docbook/ref.config.xml |   57 +-
 .../src/docbook/ref.javadocs.xml                   |    2 +-
 uima-docbook-references/src/docbook/ref.jcas.xml   |   40 +-
 .../src/docbook/ref.xml.component_descriptor.xml   |    7 +-
 uima-docbook-tools/pom.xml                         |    9 +-
 uima-docbook-tutorials-and-users-guides/pom.xml    |    9 +-
 .../docbook/annotator_analysis_engine_guide.xml    |  317 +-
 .../src/docbook/tug.application.xml                |  153 +-
 .../src/docbook/tug.multi_views.xml                |   43 +-
 uima-docbook-v3-users-guide/pom.xml                |   62 +
 .../custom_java_objects/5_steps.png                |  Bin 0 -> 64814 bytes
 .../version_3_users_guide/migrate/multiples.png    |  Bin 0 -> 26915 bytes
 .../select/select_big_pic.png                      |  Bin 0 -> 19046 bytes
 .../select/select_processing_actions.png           |  Bin 0 -> 45915 bytes
 .../select/select_selection_and_ordering.png       |  Bin 0 -> 63212 bytes
 .../select/select_source_type.png                  |  Bin 0 -> 78674 bytes
 .../select/select_terminal_form_actions.png        |  Bin 0 -> 47533 bytes
 .../src/docbook/uv3.backwards_compatibility.xml    |  418 ++
 .../src/docbook/uv3.custom_java_objects.xml        |  300 +
 .../src/docbook/uv3.logging.xml                    |  308 +
 .../src/docbook/uv3.migration.aids.xml             |  215 +
 .../src/docbook/uv3.migration.xml                  |  674 ++
 .../src/docbook/uv3.new_extended_apis.xml          |  405 ++
 .../src/docbook/uv3.overview.xml                   |  336 +
 .../src/docbook/uv3.pears.xml                      |  118 +
 .../src/docbook/uv3.performance.xml                |   89 +
 .../src/docbook/uv3.select.xml                     |  904 +++
 .../src/docbook/version_3_users_guide.xml          |   39 +
 .../src/image-source/source.pptx                   |  Bin 0 -> 74273 bytes
 uimaj-adapter-soap/pom.xml                         |    9 +-
 .../soap/AxisAnalysisEngineServiceStub.java        |   23 +-
 .../soap/AxisAnalysisEngineService_impl.java       |   19 +-
 .../adapter/soap/AxisResourceServiceManager.java   |   13 +-
 .../uima/adapter/soap/AxisResourceServiceStub.java |    6 +
 .../uima/adapter/soap/BinaryDeserializer.java      |   35 +-
 .../adapter/soap/BinaryDeserializerFactory.java    |   11 +
 .../apache/uima/adapter/soap/BinarySerializer.java |   41 +-
 .../uima/adapter/soap/BinarySerializerFactory.java |   19 +
 .../soap/SoapAnalysisEngineServiceAdapter.java     |    8 +
 .../apache/uima/adapter/soap/XmlDeserializer.java  |   54 +-
 .../uima/adapter/soap/XmlDeserializerFactory.java  |   11 +
 .../apache/uima/adapter/soap/XmlSerializer.java    |   58 +-
 .../uima/adapter/soap/XmlSerializerFactory.java    |   11 +
 .../soap/axis11/BinaryDeserializer_Axis11.java     |   34 +-
 .../soap/axis11/BinarySerializer_Axis11.java       |   41 +-
 .../soap/axis11/XmlDeserializer_Axis11.java        |   53 +-
 .../adapter/soap/axis11/XmlSerializer_Axis11.java  |   57 +-
 uimaj-adapter-vinci/pom.xml                        |   16 +-
 .../uima/adapter/vinci/CASTransportable.java       |   89 +-
 .../vinci/VinciAnalysisEngineServiceAdapter.java   |    7 +
 .../vinci/VinciAnalysisEngineServiceStub.java      |   82 +-
 .../vinci/VinciAnalysisEngineService_impl.java     |   79 +-
 .../VinciBinaryAnalysisEngineServiceStub.java      |   50 +-
 .../VinciBinaryAnalysisEngineService_impl.java     |   74 +-
 .../apache/uima/adapter/vinci/util/Constants.java  |   25 +-
 .../apache/uima/adapter/vinci/util/Descriptor.java |   72 +
 .../uima/adapter/vinci/util/NetworkUtil.java       |    1 +
 .../adapter/vinci/util/SaxVinciFrameBuilder.java   |   33 +-
 .../apache/uima/adapter/vinci/util/Shutdown.java   |    9 +
 .../vinci/util/UimaSaxVinciFrameBuilder.java       |   18 +-
 .../uima/adapter/vinci/util/VinciSaxParser.java    |   26 +
 .../uima/adapter/vinci/util/VinciTAEClient.java    |    9 +
 .../VinciAnalysisEngineServiceAdapterTest.java     |   13 +-
 uimaj-bootstrap/pom.xml                            |    9 +-
 .../org/apache/uima/bootstrap/UimaBootstrap.java   |    2 +-
 uimaj-component-test-util/pom.xml                  |    9 +-
 .../test/junit_extension/AnnotationWriter.java     |   53 +-
 .../AnnotatorPerformanceTester.java                |   36 +-
 .../uima/test/junit_extension/AnnotatorTester.java |   53 +-
 .../junit_extension/PerformanceTestResult.java     |   39 +-
 .../junit_extension/PerformanceTestResultImpl.java |  126 +-
 uimaj-core/pom.xml                                 |  224 +-
 .../main/java/org/apache/uima/I18nExceptionI.java  |  107 +
 .../apache/uima/InternationalizedException.java    |   17 +-
 .../uima/InternationalizedRuntimeException.java    |    3 +-
 .../main/java/org/apache/uima/List_of_ints.java    |  407 ++
 .../main/java/org/apache/uima/UIMAException.java   |  123 +-
 .../main/java/org/apache/uima/UIMAFramework.java   |   44 +-
 .../java/org/apache/uima/UIMARuntimeException.java |  195 +-
 .../apache/uima/UIMA_IllegalArgumentException.java |    4 +-
 .../apache/uima/UIMA_IllegalStateException.java    |   10 +-
 .../uima/UIMA_UnsupportedOperationException.java   |    2 +-
 .../java/org/apache/uima/UimaContextHolder.java    |    6 +-
 .../java/org/apache/uima/UimaSerializable.java     |   50 +
 .../java/org/apache/uima/UimaSerializableFSs.java  |   40 +
 .../AnalysisComponent_ImplBase.java                |   11 +-
 .../analysis_component/CasAnnotator_ImplBase.java  |    4 +-
 .../analysis_component/CasMultiplier_ImplBase.java |    4 +-
 .../uima/analysis_engine/AnalysisEngine.java       |   21 +
 .../uima/analysis_engine/asb/impl/ASB_impl.java    |   24 +-
 .../asb/impl/FlowControllerContainer.java          |   39 +-
 .../impl/AggregateAnalysisEngine_impl.java         |   18 +-
 .../impl/AnalysisEngineDescription_impl.java       |   30 +-
 .../impl/AnalysisEngineImplBase.java               |  110 +-
 .../impl/AnalysisEngineManagementImpl.java         |    5 +-
 .../impl/MultiThreadCoordination.java              | 1880 -----
 .../impl/MultiprocessingAnalysisEngine_impl.java   |   10 +-
 .../impl/PearAnalysisEngineWrapper.java            |   33 +-
 .../impl/PrimitiveAnalysisEngine_impl.java         |   85 +-
 .../impl/ResultSpecification_impl.java             |   10 +-
 .../apache/uima/analysis_engine/impl/RsFeats.java  |    4 +-
 .../uima/analysis_engine/impl/RsFullFeatNames.java |    6 +-
 .../apache/uima/analysis_engine/impl/RsLang.java   |    2 +-
 .../apache/uima/analysis_engine/impl/RsLangs.java  |   15 +-
 .../apache/uima/analysis_engine/impl/RsType.java   |    2 +-
 .../uima/analysis_engine/impl/RsTypesMap.java      |    4 +-
 .../impl/UimacppAnalysisEngineImpl.java            |   19 +-
 .../impl/compatibility/AnnotatorAdapter.java       |    4 +-
 .../impl/compatibility/CasConsumerAdapter.java     |    2 +-
 .../compatibility/CollectionReaderAdapter.java     |    2 +-
 .../metadata/impl/CapabilityLanguageFlow_impl.java |    3 +-
 .../metadata/impl/FixedFlow_impl.java              |    3 +-
 .../service/impl/AnalysisEngineService_impl.java   |   13 +-
 .../org/apache/uima/cas/AbstractCas_ImplBase.java  |    1 +
 .../java/org/apache/uima/cas/AnnotationBaseFS.java |    3 +-
 .../src/main/java/org/apache/uima/cas/ArrayFS.java |   41 +-
 .../java/org/apache/uima/cas/BooleanArrayFS.java   |    8 +-
 .../main/java/org/apache/uima/cas/ByteArrayFS.java |    7 +-
 .../src/main/java/org/apache/uima/cas/CAS.java     |  353 +-
 .../java/org/apache/uima/cas/CASException.java     |   18 +-
 .../org/apache/uima/cas/CASRuntimeException.java   |  164 +-
 .../java/org/apache/uima/cas/CommonArrayFS.java    |   42 +-
 .../java/org/apache/uima/cas/DoubleArrayFS.java    |    2 +-
 .../java/org/apache/uima/cas/FSComparators.java    |   32 +
 .../src/main/java/org/apache/uima/cas/FSIndex.java |  155 +-
 .../org/apache/uima/cas/FSIndexRepository.java     |   93 +-
 .../main/java/org/apache/uima/cas/FSIterator.java  |  259 +-
 .../main/java/org/apache/uima/cas/FeaturePath.java |   75 +-
 .../java/org/apache/uima/cas/FeatureStructure.java |  134 +-
 .../java/org/apache/uima/cas/FloatArrayFS.java     |   10 +-
 .../main/java/org/apache/uima/cas/IntArrayFS.java  |   12 +-
 .../main/java/org/apache/uima/cas/LongArrayFS.java |   10 +-
 .../java/org/apache/uima/cas/ParsingException.java |    1 -
 .../main/java/org/apache/uima/cas/SelectFSs.java   |  818 +++
 .../java/org/apache/uima/cas/ShortArrayFS.java     |    7 +-
 .../src/main/java/org/apache/uima/cas/SofaFS.java  |   12 +-
 .../java/org/apache/uima/cas/StringArrayFS.java    |   80 +-
 .../src/main/java/org/apache/uima/cas/Type.java    |   27 +-
 .../main/java/org/apache/uima/cas/TypeClass.java   |   31 +-
 .../main/java/org/apache/uima/cas/TypeSystem.java  |   28 +-
 .../apache/uima/cas/admin/CASAdminException.java   |  167 +-
 .../java/org/apache/uima/cas/admin/CASFactory.java |   24 +-
 .../java/org/apache/uima/cas/admin/CASMgr.java     |    5 +
 .../apache/uima/cas/admin/FSIndexComparator.java   |   12 +-
 .../uima/cas/admin/FSIndexRepositoryMgr.java       |   12 +-
 .../org/apache/uima/cas/admin/LinearTypeOrder.java |   14 +
 .../org/apache/uima/cas/admin/TypeSystemMgr.java   |   45 +-
 .../main/java/org/apache/uima/cas/impl/AllFSs.java |  190 +
 .../apache/uima/cas/impl/AnnotationBaseImpl.java   |  126 +-
 .../org/apache/uima/cas/impl/AnnotationImpl.java   |  136 +-
 .../uima/cas/impl/AnnotationImplException.java     |    4 +-
 .../apache/uima/cas/impl/AnnotationIndexImpl.java  |  198 -
 .../uima/cas/impl/AnnotationTreeNodeImpl.java      |    8 +-
 .../org/apache/uima/cas/impl/ArrayFSGenerator.java |   36 -
 .../java/org/apache/uima/cas/impl/ArrayFSImpl.java |  128 -
 .../org/apache/uima/cas/impl/BinaryCasSerDes.java  | 1989 ++++++
 .../org/apache/uima/cas/impl/BinaryCasSerDes4.java | 3176 +++++----
 .../org/apache/uima/cas/impl/BinaryCasSerDes6.java | 3707 +++++-----
 .../apache/uima/cas/impl/BooleanArrayFSImpl.java   |  146 +-
 .../org/apache/uima/cas/impl/BuiltinTypeKinds.java |  195 +
 .../org/apache/uima/cas/impl/ByteArrayFSImpl.java  |  141 +-
 .../java/org/apache/uima/cas/impl/ByteHeap.java    |  205 +-
 .../java/org/apache/uima/cas/impl/CASImpl.java     | 7521 ++++++++++----------
 .../java/org/apache/uima/cas/impl/CASMetadata.java |  170 -
 .../org/apache/uima/cas/impl/CASMgrSerializer.java |   93 +-
 .../org/apache/uima/cas/impl/CASSerializer.java    |  898 ++-
 .../java/org/apache/uima/cas/impl/CasCompare.java  | 2168 ++++++
 .../org/apache/uima/cas/impl/CasSeqAddrMaps.java   |  137 +-
 .../apache/uima/cas/impl/CasSerializerSupport.java |  662 +-
 .../java/org/apache/uima/cas/impl/CasState.java    |   29 +-
 .../apache/uima/cas/impl/CasTypeSystemMapper.java  |  359 +-
 .../apache/uima/cas/impl/CommonArrayFSImpl.java    |   78 +-
 .../apache/uima/cas/impl/CommonAuxArrayFSImpl.java |   97 -
 .../org/apache/uima/cas/impl/CommonAuxHeap.java    |  402 +-
 .../org/apache/uima/cas/impl/CommonSerDes.java     |   18 +-
 .../uima/cas/impl/CommonSerDesSequential.java      |  211 +
 .../uima/cas/impl/ConstraintFactoryImpl.java       |   29 +-
 .../apache/uima/cas/impl/CopyOnWriteIndexPart.java |   57 +
 .../uima/cas/impl/DebugFSLogicalStructure.java     |   49 +-
 .../apache/uima/cas/impl/DebugNameValuePair.java   |    9 +-
 .../uima/cas/impl/DefaultAnnotationComparator.java |   91 -
 .../cas/impl/DefaultFSAnnotationComparator.java    |   59 -
 .../apache/uima/cas/impl/DeferredIndexUpdates.java |   17 +-
 .../apache/uima/cas/impl/DoubleArrayFSImpl.java    |  144 +-
 .../apache/uima/cas/impl/EmbeddedConstraint.java   |    6 +-
 .../java/org/apache/uima/cas/impl/FSBagIndex.java  |  320 -
 .../uima/cas/impl/FSBooleanConstraintImpl.java     |    3 +
 .../org/apache/uima/cas/impl/FSClassRegistry.java  | 1588 ++++-
 .../org/apache/uima/cas/impl/FSComparator.java     |    4 +-
 .../uima/cas/impl/FSFloatConstraintImpl.java       |   29 +-
 .../java/org/apache/uima/cas/impl/FSGenerator.java |   65 +-
 .../org/apache/uima/cas/impl/FSImplComparator.java |    3 +-
 .../uima/cas/impl/FSIndexComparatorImpl.java       |  182 +-
 .../java/org/apache/uima/cas/impl/FSIndexFlat.java |  708 --
 .../java/org/apache/uima/cas/impl/FSIndexImpl.java |   42 -
 .../uima/cas/impl/FSIndexRepositoryImpl.java       | 4028 ++++-------
 .../org/apache/uima/cas/impl/FSIntArrayIndex.java  |  440 --
 .../uima/cas/impl/FSIntIteratorImplBase.java       |  137 -
 .../apache/uima/cas/impl/FSIteratorAggregate.java  |  187 -
 .../apache/uima/cas/impl/FSIteratorImplBase.java   |  206 +-
 .../apache/uima/cas/impl/FSIteratorWrapper.java    |  125 -
 .../cas/impl/FSIteratorWrapperDoubleCheck.java     |  156 -
 .../org/apache/uima/cas/impl/FSLeafIndexImpl.java  |  541 --
 .../apache/uima/cas/impl/FSListIteratorImpl.java   |  161 -
 .../java/org/apache/uima/cas/impl/FSRBTIndex.java  |  151 -
 .../org/apache/uima/cas/impl/FSRBTSetIndex.java    |  172 -
 .../uima/cas/impl/FSStringConstraintImpl.java      |    3 +
 .../apache/uima/cas/impl/FSTypeConstraintImpl.java |   12 +-
 .../org/apache/uima/cas/impl/FSsTobeAddedback.java |  181 +-
 .../java/org/apache/uima/cas/impl/FeatureImpl.java |  290 +-
 .../uima/cas/impl/FeatureImpl_jcas_only.java       |   47 +
 .../org/apache/uima/cas/impl/FeaturePathImpl.java  | 1713 ++---
 .../apache/uima/cas/impl/FeatureStructureImpl.java |  673 +-
 .../uima/cas/impl/FeatureStructureImplC.java       | 1818 ++++-
 .../apache/uima/cas/impl/FeatureValuePathImpl.java |  101 +-
 .../org/apache/uima/cas/impl/FilteredIterator.java |   91 +-
 .../org/apache/uima/cas/impl/FloatArrayFSImpl.java |  159 +-
 .../org/apache/uima/cas/impl/FloatConstraint.java  |    2 +
 .../org/apache/uima/cas/impl/FsGenerator3.java     |   32 +
 .../org/apache/uima/cas/impl/FsGeneratorArray.java |   33 +
 .../apache/uima/cas/impl/FsIndex_annotation.java   |  149 +
 .../java/org/apache/uima/cas/impl/FsIndex_bag.java |  265 +
 .../org/apache/uima/cas/impl/FsIndex_flat.java     |  228 +
 .../org/apache/uima/cas/impl/FsIndex_iicp.java     |  628 ++
 .../apache/uima/cas/impl/FsIndex_set_sorted.java   |  281 +
 .../apache/uima/cas/impl/FsIndex_singletype.java   |  603 ++
 .../org/apache/uima/cas/impl/FsIndex_snapshot.java |  158 +
 .../cas/impl/FsIterator_aggregation_common.java    |  294 +
 .../apache/uima/cas/impl/FsIterator_backwards.java |  148 +
 .../org/apache/uima/cas/impl/FsIterator_bag.java   |  195 +
 .../apache/uima/cas/impl/FsIterator_bag_pear.java  |   49 +
 .../apache/uima/cas/impl/FsIterator_limited.java   |  144 +
 .../uima/cas/impl/FsIterator_multiple_indexes.java |  204 +
 .../uima/cas/impl/FsIterator_set_sorted2.java      |  328 +
 .../uima/cas/impl/FsIterator_set_sorted_pear.java  |   49 +
 .../uima/cas/impl/FsIterator_singletype.java       |  100 +
 .../uima/cas/impl/FsIterator_subtypes_ordered.java |  515 ++
 .../cas/impl/FsIterator_subtypes_snapshot.java     |  268 +
 .../main/java/org/apache/uima/cas/impl/Heap.java   |  619 +-
 .../main/java/org/apache/uima/cas/impl/Id2FS.java  |  341 +
 .../org/apache/uima/cas/impl/IntArrayFSImpl.java   |  153 +-
 .../org/apache/uima/cas/impl/IntIterator4bag.java  |  108 -
 .../org/apache/uima/cas/impl/IntIterator4set.java  |  126 -
 .../apache/uima/cas/impl/IntIterator4sorted.java   |  180 -
 .../uima/cas/impl/LLUnambiguousIteratorImpl.java   |  161 +-
 .../uima/cas/impl/LinearTypeOrderBuilderImpl.java  |  208 +-
 .../java/org/apache/uima/cas/impl/ListUtils.java   |  561 --
 .../org/apache/uima/cas/impl/LongArrayFSImpl.java  |  187 +-
 .../java/org/apache/uima/cas/impl/LongHeap.java    |  202 +-
 .../java/org/apache/uima/cas/impl/LongSet.java     |   76 +
 .../java/org/apache/uima/cas/impl/LowLevelCAS.java |   67 +-
 .../apache/uima/cas/impl/LowLevelException.java    |  121 +-
 .../org/apache/uima/cas/impl/LowLevelIndex.java    |  182 +-
 .../uima/cas/impl/LowLevelIndexRepository.java     |    8 +-
 .../org/apache/uima/cas/impl/LowLevelIterator.java |  171 +-
 .../uima/cas/impl/LowLevelIteratorAggregate.java   |  180 -
 .../uima/cas/impl/LowLevelIterator_empty.java      |   68 +
 .../apache/uima/cas/impl/LowLevelTypeSystem.java   |    2 +-
 .../java/org/apache/uima/cas/impl/MarkerImpl.java  |   72 +-
 .../apache/uima/cas/impl/MethodHandlesLookup.java  |   32 +
 .../apache/uima/cas/impl/OutOfTypeSystemData.java  |   56 +-
 .../org/apache/uima/cas/impl/PathConstraint.java   |    1 +
 .../org/apache/uima/cas/impl/SelectFSs_impl.java   | 1626 +++++
 .../org/apache/uima/cas/impl/Serialization.java    |    6 +-
 .../org/apache/uima/cas/impl/ShortArrayFSImpl.java |  140 +-
 .../java/org/apache/uima/cas/impl/ShortHeap.java   |  196 +-
 .../java/org/apache/uima/cas/impl/SlotKinds.java   |   18 +
 .../apache/uima/cas/impl/SlotKindsConstants.java   |   70 +
 .../java/org/apache/uima/cas/impl/SofaFSImpl.java  |  263 +-
 .../apache/uima/cas/impl/StringArrayFSImpl.java    |  153 +-
 .../java/org/apache/uima/cas/impl/StringHeap.java  |   24 +-
 .../java/org/apache/uima/cas/impl/StringSet.java   |   77 +
 .../org/apache/uima/cas/impl/StringTypeImpl.java   |   40 -
 .../java/org/apache/uima/cas/impl/Subiterator.java | 1420 ++--
 .../java/org/apache/uima/cas/impl/TypeImpl.java    | 1121 ++-
 .../org/apache/uima/cas/impl/TypeImpl_annot.java   |   37 +
 .../apache/uima/cas/impl/TypeImpl_annotBase.java   |   37 +
 .../org/apache/uima/cas/impl/TypeImpl_array.java   |  157 +
 .../org/apache/uima/cas/impl/TypeImpl_list.java    |   37 +
 .../apache/uima/cas/impl/TypeImpl_primitive.java   |   38 +
 .../org/apache/uima/cas/impl/TypeImpl_string.java  |   48 +
 .../uima/cas/impl/TypeImpl_stringSubtype.java      |   51 +
 .../org/apache/uima/cas/impl/TypeSystem2Xml.java   |   18 +-
 .../apache/uima/cas/impl/TypeSystemConstants.java  |  113 +
 .../org/apache/uima/cas/impl/TypeSystemImpl.java   | 3712 ++++++----
 .../org/apache/uima/cas/impl/TypeSystemUtils.java  |  121 +-
 .../org/apache/uima/cas/impl/UimaDecompiler.java   |  345 +
 .../org/apache/uima/cas/impl/XCASDeserializer.java |  683 +-
 .../apache/uima/cas/impl/XCASParsingException.java |   17 +-
 .../org/apache/uima/cas/impl/XCASSerializer.java   |  452 +-
 .../apache/uima/cas/impl/XmiCasDeserializer.java   | 1708 +++--
 .../org/apache/uima/cas/impl/XmiCasSerializer.java |  308 +-
 .../uima/cas/impl/XmiSerializationSharedData.java  |  344 +-
 .../java/org/apache/uima/cas/impl/package.html     |  115 +-
 .../src/main/java/org/apache/uima/cas/package.html |  129 +-
 .../org/apache/uima/cas/text/AnnotationFS.java     |   36 +
 .../org/apache/uima/cas/text/AnnotationIndex.java  |   12 +-
 .../org/apache/uima/cas_data/impl/CasDataImpl.java |    2 +-
 .../apache/uima/cas_data/impl/CasDataUtils.java    |    2 +-
 .../uima/cas_data/impl/FeatureStructureImpl.java   |    7 +-
 .../uima/cas_data/impl/PrimitiveValueImpl.java     |    8 +-
 .../cas_data/impl/XCasToCasDataSaxHandler.java     |    5 +-
 .../impl/CasConsumerDescription_impl.java          |    4 +-
 .../impl/CasInitializerDescription_impl.java       |    9 +-
 .../impl/CollectionReaderDescription_impl.java     |    3 +-
 .../uima/examples/SourceDocumentInformation.java   |  320 +-
 .../examples/SourceDocumentInformation_Type.java   |  219 -
 .../apache/uima/flow/FlowController_ImplBase.java  |    9 +
 .../impl/CapabilityLanguageFlowController.java     |   16 +-
 .../apache/uima/flow/impl/FixedFlowController.java |    4 +-
 .../apache/uima/impl/CasConsumerFactory_impl.java  |    2 +-
 .../uima/impl/CasInitializerFactory_impl.java      |    6 +-
 .../apache/uima/impl/ChildUimaContext_impl.java    |   12 +-
 .../uima/impl/CompositeResourceFactory_impl.java   |    2 +-
 .../uima/impl/ResourceSpecifierFactory_impl.java   |    1 +
 .../org/apache/uima/impl/RootUimaContext_impl.java |   14 +-
 .../org/apache/uima/impl/UIMAFramework_impl.java   |   67 +-
 .../org/apache/uima/impl/UimaContext_ImplBase.java |   87 +-
 .../src/main/java/org/apache/uima/impl/Util.java   |   48 +-
 .../main/java/org/apache/uima/impl/package.html    |    4 +-
 .../uima/internal/util/AnalysisEnginePool.java     |   12 +-
 .../uima/internal/util/CharArraySpanMap.java       |    2 +-
 .../apache/uima/internal/util/CharacterUtils.java  |    6 +-
 .../org/apache/uima/internal/util/Class_TCCL.java  |   15 +-
 .../uima/internal/util/CommandLineParser.java      |   10 +-
 .../uima/internal/util/Common_hash_support.java    |  546 ++
 .../uima/internal/util/ComparableFSIterator.java   |   39 +
 .../util/ComparableIntPointerIterator.java         |   47 -
 .../uima/internal/util/CopyOnWriteObjHashSet.java  |  197 +
 .../util/CopyOnWriteOrderedFsSet_array.java        |  150 +
 .../org/apache/uima/internal/util/GraphNode.java   |    4 +-
 .../org/apache/uima/internal/util/I18nUtil.java    |   42 +-
 .../apache/uima/internal/util/Int2IntHashMap.java  |  515 --
 .../apache/uima/internal/util/Int2ObjHashMap.java  |  610 ++
 .../apache/uima/internal/util/Int2ObjListMap.java  |   68 +
 .../org/apache/uima/internal/util/IntBitSet.java   |   27 +-
 .../org/apache/uima/internal/util/IntHashSet.java  |  907 ++-
 .../apache/uima/internal/util/IntListIterator.java |   36 +-
 .../java/org/apache/uima/internal/util/IntSet.java |   22 +-
 .../org/apache/uima/internal/util/IntStack.java    |    4 +-
 .../org/apache/uima/internal/util/IntVector.java   |  100 +-
 .../java/org/apache/uima/internal/util/Misc.java   | 1225 ++++
 .../org/apache/uima/internal/util/MiscImpl.java    |  101 -
 .../internal/util/MsgLocalizationClassLoader.java  |  170 +-
 .../uima/internal/util/Obj2IntIdentityHashMap.java |  588 ++
 .../org/apache/uima/internal/util/ObjHashSet.java  |  694 ++
 .../uima/internal/util/OrderedFsSet_array.java     |  689 ++
 .../uima/internal/util/OrderedFsSet_array2.java    | 2141 ++++++
 .../java/org/apache/uima/internal/util/Pair.java   |   79 +
 .../apache/uima/internal/util/PositiveIntSet.java  |   20 +
 .../uima/internal/util/PositiveIntSet_impl.java    |   42 +-
 .../apache/uima/internal/util/ResourcePool.java    |    4 +-
 .../uima/internal/util/SerializationUtils.java     |   18 +-
 .../apache/uima/internal/util/StringToIntMap.java  |    8 +-
 .../org/apache/uima/internal/util/StringUtils.java |    2 +-
 .../org/apache/uima/internal/util/SymbolTable.java |    8 +-
 .../apache/uima/internal/util/SystemEnvReader.java |   13 +-
 .../uima/internal/util/TextStringTokenizer.java    |   10 +-
 .../apache/uima/internal/util/TextTokenizer.java   |   10 +-
 .../apache/uima/internal/util/UIMAClassLoader.java |   50 +-
 .../org/apache/uima/internal/util/Utilities.java   |    2 +
 .../apache/uima/internal/util/XmlAttribute.java    |    4 +-
 .../internal/util/XmlElementNameAndContents.java   |    6 +-
 .../uima/internal/util/function/Consumer2.java     |   24 +
 .../function/Consumer_T_int_withIOException.java   |   26 +
 .../util/function/Consumer_T_withIOException.java  |   26 +
 .../util/function/Consumer_withSaxException.java   |   26 +
 .../internal/util/function/DeserBinaryIndexes.java |   26 +
 .../util/function/IntConsumer_withIOException.java |   26 +
 .../util/function/Runnable_withException.java      |   24 +
 .../util/function/Runnable_withSaxException.java   |   26 +
 .../uima/internal/util/function/package-info.java  |   24 +
 .../uima/internal/util/rb_trees/Int2IntRBT.java    |   39 +-
 .../uima/internal/util/rb_trees/IntArrayRBT.java   |   41 +-
 .../internal/util/rb_trees/IntArrayRBTcommon.java  |   15 +-
 .../uima/internal/util/rb_trees/IntRBTNode.java    |    2 +-
 .../internal/util/rb_trees/IntRedBlackTree.java    |    3 +-
 .../uima/internal/util/rb_trees/RedBlackTree.java  |    6 +-
 .../src/main/java/org/apache/uima/jcas/JCas.java   |  445 +-
 .../java/org/apache/uima/jcas/JCasRegistry.java    |   94 +-
 .../org/apache/uima/jcas/JFSIndexRepository.java   |    3 +-
 .../org/apache/uima/jcas/cas/AnnotationBase.java   |   93 +-
 .../apache/uima/jcas/cas/AnnotationBase_Type.java  |  170 +-
 .../java/org/apache/uima/jcas/cas/ArrayFSImpl.java |   32 +
 .../org/apache/uima/jcas/cas/BooleanArray.java     |  139 +-
 .../apache/uima/jcas/cas/BooleanArray_Type.java    |  150 -
 .../java/org/apache/uima/jcas/cas/ByteArray.java   |  148 +-
 .../org/apache/uima/jcas/cas/ByteArray_Type.java   |  149 -
 .../org/apache/uima/jcas/cas/CommonArray_Type.java |   53 -
 .../java/org/apache/uima/jcas/cas/CommonList.java  |  318 +
 .../apache/uima/jcas/cas/CommonPrimitiveArray.java |   40 +
 .../java/org/apache/uima/jcas/cas/DoubleArray.java |  189 +-
 .../org/apache/uima/jcas/cas/DoubleArray_Type.java |  145 -
 .../java/org/apache/uima/jcas/cas/EmptyFSList.java |   30 +-
 .../org/apache/uima/jcas/cas/EmptyFSList_Type.java |   63 -
 .../org/apache/uima/jcas/cas/EmptyFloatList.java   |   26 +-
 .../apache/uima/jcas/cas/EmptyFloatList_Type.java  |   65 -
 .../org/apache/uima/jcas/cas/EmptyIntegerList.java |   27 +-
 .../uima/jcas/cas/EmptyIntegerList_Type.java       |   65 -
 .../java/org/apache/uima/jcas/cas/EmptyList.java   |   27 +
 .../org/apache/uima/jcas/cas/EmptyStringList.java  |   28 +-
 .../apache/uima/jcas/cas/EmptyStringList_Type.java |   63 -
 .../java/org/apache/uima/jcas/cas/FSArray.java     |  287 +-
 .../java/org/apache/uima/jcas/cas/FSArrayList.java | 1116 +++
 .../org/apache/uima/jcas/cas/FSArray_Type.java     |  167 -
 .../java/org/apache/uima/jcas/cas/FSHashSet.java   |  554 ++
 .../org/apache/uima/jcas/cas/FSLinkedHashSet.java  |  111 +
 .../main/java/org/apache/uima/jcas/cas/FSList.java |  193 +-
 .../java/org/apache/uima/jcas/cas/FSList_Type.java |   64 -
 .../java/org/apache/uima/jcas/cas/FloatArray.java  |  182 +-
 .../org/apache/uima/jcas/cas/FloatArray_Type.java  |  151 -
 .../java/org/apache/uima/jcas/cas/FloatList.java   |  122 +-
 .../org/apache/uima/jcas/cas/FloatList_Type.java   |   64 -
 .../main/java/org/apache/uima/jcas/cas/Int2FS.java |  361 +
 .../org/apache/uima/jcas/cas/IntegerArray.java     |  222 +-
 .../org/apache/uima/jcas/cas/IntegerArrayList.java |  568 ++
 .../apache/uima/jcas/cas/IntegerArray_Type.java    |  156 -
 .../java/org/apache/uima/jcas/cas/IntegerList.java |  144 +-
 .../org/apache/uima/jcas/cas/IntegerList_Type.java |   64 -
 .../java/org/apache/uima/jcas/cas/LongArray.java   |  197 +-
 .../org/apache/uima/jcas/cas/LongArray_Type.java   |  152 -
 .../org/apache/uima/jcas/cas/NonEmptyFSList.java   |  150 +-
 .../apache/uima/jcas/cas/NonEmptyFSList_Type.java  |  108 -
 .../apache/uima/jcas/cas/NonEmptyFloatList.java    |  132 +-
 .../uima/jcas/cas/NonEmptyFloatList_Type.java      |  107 -
 .../apache/uima/jcas/cas/NonEmptyIntegerList.java  |  147 +-
 .../uima/jcas/cas/NonEmptyIntegerList_Type.java    |  107 -
 .../org/apache/uima/jcas/cas/NonEmptyList.java     |   25 +
 .../apache/uima/jcas/cas/NonEmptyStringList.java   |  138 +-
 .../uima/jcas/cas/NonEmptyStringList_Type.java     |  108 -
 .../apache/uima/jcas/cas/SelectViaCopyToArray.java |   90 +
 .../java/org/apache/uima/jcas/cas/ShortArray.java  |  145 +-
 .../org/apache/uima/jcas/cas/ShortArray_Type.java  |  153 -
 .../main/java/org/apache/uima/jcas/cas/Sofa.java   |  384 +-
 .../java/org/apache/uima/jcas/cas/Sofa_Type.java   |  108 -
 .../java/org/apache/uima/jcas/cas/StringArray.java |  145 +-
 .../org/apache/uima/jcas/cas/StringArray_Type.java |  155 -
 .../java/org/apache/uima/jcas/cas/StringList.java  |  118 +-
 .../org/apache/uima/jcas/cas/StringList_Type.java  |   64 -
 .../main/java/org/apache/uima/jcas/cas/TOP.java    |  175 +-
 .../java/org/apache/uima/jcas/cas/TOP_Type.java    |  422 +-
 .../org/apache/uima/jcas/impl/JCasHashMap.java     |  261 +-
 .../apache/uima/jcas/impl/JCasHashMapSubMap.java   |  706 +-
 .../java/org/apache/uima/jcas/impl/JCasImpl.java   | 1374 +---
 .../uima/jcas/impl/JFSIndexRepositoryImpl.java     |    1 -
 .../java/org/apache/uima/jcas/impl/package.html    |    4 +-
 .../java/org/apache/uima/jcas/tcas/Annotation.java |  225 +-
 .../org/apache/uima/jcas/tcas/Annotation_Type.java |  263 +-
 .../java/org/apache/uima/jcas/tcas/package.html    |   24 -
 .../src/main/java/org/apache/uima/package.html     |   25 +-
 .../uima/pear/tools/InstallationController.java    |   78 +-
 .../uima/pear/tools/InstallationDescriptor.java    |   23 +-
 .../pear/tools/InstallationDescriptorHandler.java  |   18 +-
 .../uima/pear/tools/InstallationProcessor.java     |   18 +-
 .../uima/pear/tools/LocalInstallationAgent.java    |   54 +-
 .../org/apache/uima/pear/tools/PackageBrowser.java |   13 +-
 .../java/org/apache/uima/pear/util/FileUtil.java   |  233 +-
 .../org/apache/uima/pear/util/MessageRouter.java   |    4 +-
 .../org/apache/uima/pear/util/ProcessUtil.java     |    2 +-
 .../java/org/apache/uima/pear/util/UIMAUtil.java   |    2 +-
 .../java/org/apache/uima/pear/util/XMLUtil.java    |   15 +-
 .../org/apache/uima/resource/CasDefinition.java    |   23 +-
 .../java/org/apache/uima/resource/Resource.java    |    2 +-
 .../org/apache/uima/resource/ResourceManager.java  |   20 +-
 .../apache/uima/resource/Resource_ImplBase.java    |   58 +-
 .../apache/uima/resource/impl/CasManager_impl.java |   13 +-
 .../impl/ConfigurableDataResource_impl.java        |   19 +-
 .../impl/ConfigurationManagerImplBase.java         |   10 +-
 .../resource/impl/ConfigurationManager_impl.java   |    2 +-
 .../resource/impl/FileLanguageResource_impl.java   |    4 +-
 .../resource/impl/FileResourceSpecifier_impl.java  |    2 -
 .../resource/impl/RelativePathResolver_impl.java   |   16 +-
 .../impl/ResourceCreationSpecifier_impl.java       |   14 +-
 .../uima/resource/impl/ResourceManager_impl.java   |   69 +-
 .../apache/uima/resource/impl/Session_impl.java    |    2 +-
 .../resource/metadata/ExternalResourceBinding.java |    4 +-
 .../resource/metadata/impl/Capability_impl.java    |   41 +-
 .../metadata/impl/ConfigurationGroup_impl.java     |    5 +-
 .../ConfigurationParameterDeclarations_impl.java   |   15 +-
 .../impl/ConfigurationParameterSettings_impl.java  |   10 +-
 .../metadata/impl/ConfigurationParameter_impl.java |    7 +-
 .../metadata/impl/FsIndexCollection_impl.java      |   16 +-
 .../metadata/impl/FsIndexDescription_impl.java     |    4 +-
 .../impl/MetaDataObjectSerializer_plain.java       |    1 -
 .../metadata/impl/MetaDataObject_impl.java         |   16 +-
 .../impl/ResourceManagerConfiguration_impl.java    |   16 +-
 .../metadata/impl/TypeDescription_impl.java        |    8 +-
 .../metadata/impl/TypePriorities_impl.java         |   14 +-
 .../metadata/impl/TypePriorityList_impl.java       |    2 +-
 .../metadata/impl/TypeSystemDescription_impl.java  |   14 +-
 .../org/apache/uima/uimacpp/CppUimajEngine.java    |    9 +-
 .../uima/uimacpp/UimacppAnalysisComponent.java     |    2 +-
 .../util/AnalysisEnginePerformanceReports.java     |    2 +-
 .../org/apache/uima/util/AnalysisEngineUtils.java  |    2 +-
 .../apache/uima/util/AutoCloseableNoException.java |   33 +
 .../main/java/org/apache/uima/util/CasCopier.java  | 1025 +--
 .../org/apache/uima/util/CasCreationUtils.java     |  156 +-
 .../main/java/org/apache/uima/util/CasIOUtils.java |   29 +-
 .../java/org/apache/uima/util/CasLoadMode.java     |    2 +-
 .../main/java/org/apache/uima/util/CasPool.java    |   10 +-
 .../java/org/apache/uima/util/CasToInlineXml.java  |    5 +-
 .../org/apache/uima/util/ConsumerCasUtils.java     |    3 +-
 .../main/java/org/apache/uima/util/FileUtils.java  |   79 +-
 .../main/java/org/apache/uima/util/IntEntry.java   |   85 +
 .../java/org/apache/uima/util/IteratorNvc.java     |   34 +
 .../main/java/org/apache/uima/util/JCasPool.java   |    6 +-
 .../src/main/java/org/apache/uima/util/Level.java  |   15 +-
 .../src/main/java/org/apache/uima/util/Logger.java |  247 +-
 .../java/org/apache/uima/util/MessageReport.java   |    1 +
 .../src/main/java/org/apache/uima/util/Misc.java   |    2 +-
 .../apache/uima/util/SimpleResourceFactory.java    |   10 +-
 .../java/org/apache/uima/util/TCasToInlineXml.java |   11 +-
 .../java/org/apache/uima/util/TypeSystemUtil.java  |    5 +-
 .../java/org/apache/uima/util/XMLSerializer.java   |   16 +-
 .../org/apache/uima/util/XmlCasDeserializer.java   |   10 +-
 .../org/apache/uima/util/XmlCasSerializer.java     |    6 +-
 .../uima/util/impl/CasPoolManagementImpl.java      |    2 +-
 .../java/org/apache/uima/util/impl/Constants.java  |   42 +
 .../java/org/apache/uima/util/impl/DataIO.java     |    8 +-
 .../apache/uima/util/impl/JSR47Logger_impl.java    |  566 +-
 .../apache/uima/util/impl/Log4jLogger_impl.java    |  637 +-
 .../apache/uima/util/impl/Logger_common_impl.java  | 1200 ++++
 .../org/apache/uima/util/impl/Logger_impl.java     |  313 +-
 .../org/apache/uima/util/impl/OptimizeStrings.java |   22 +-
 .../uima/util/impl/ProcessTraceEvent_impl.java     |    2 +-
 .../apache/uima/util/impl/ProcessTrace_impl.java   |   12 +-
 .../org/apache/uima/util/impl/Settings_impl.java   |   11 +-
 .../apache/uima/util/impl/Slf4jLogger_impl.java    |  410 ++
 .../org/apache/uima/util/impl/XMLParser_impl.java  |    2 +-
 .../apache/uima/UIMAException_Messages.properties  |   58 +-
 .../apache/uima/cas/admin/admin_errors.properties  |   13 +
 .../uima/cas/impl/ll_runtimeException.properties   |    3 +-
 .../org/apache/uima/cas/impl/xcas.properties       |    4 +-
 .../org/apache/uima/impl/factoryConfig.xml         |    3 +-
 .../resources/org/apache/uima/semibuiltins.xml     |  101 +
 uimaj-core/src/test/java/aa/AbstractType.java      |  149 +-
 uimaj-core/src/test/java/aa/AbstractType_Type.java |  104 -
 uimaj-core/src/test/java/aa/ConcreteType.java      |  152 +-
 uimaj-core/src/test/java/aa/ConcreteType_Type.java |  103 -
 .../src/test/java/aa/MissingFeatureInCas.java      |  240 +-
 .../src/test/java/aa/MissingFeatureInCas_Type.java |  154 -
 uimaj-core/src/test/java/aa/MissingInCas.java      |  114 +-
 uimaj-core/src/test/java/aa/MissingInCas_Type.java |   77 -
 uimaj-core/src/test/java/aa/Root.java              |  293 +-
 uimaj-core/src/test/java/aa/Root_Type.java         |  557 --
 uimaj-core/src/test/java/aa/T.java                 |  118 +
 .../test/java/org/apache/lang/LanguagePair.java    |  226 +-
 .../java/org/apache/lang/LanguagePair_Type.java    |  135 -
 .../uima/ae/multiplier/SimpleCasGenerator.java     |    4 +-
 .../org/apache/uima/ae/noop/NoOpAnnotator.java     |    9 +-
 .../impl/AnalysisEngineDescription_implTest.java   |   32 +-
 .../impl/AnalysisEngineManagementImplTest.java     |    7 +-
 .../impl/AnalysisEngine_implTest.java              |  448 +-
 .../analysis_engine/impl/AnnotationWriter.java     |    7 +-
 .../impl/AnnotatorContext_implTest.java            |   14 +-
 .../uima/analysis_engine/impl/ErrorAnnotator.java  |    9 +
 .../impl/FlowControllerForErrorTest.java           |    6 +-
 .../analysis_engine/impl/MultiViewAnnotator.java   |    1 -
 .../MultiprocessingAnalysisEngine_implTest.java    |   44 +-
 .../impl/PearAnalysisEngineWrapperTest.java        |    3 +-
 .../uima/analysis_engine/impl/ResultSpecTest.java  |   24 +-
 .../impl/ResultSpecWithTypeSystemTest.java         |   27 +-
 .../impl/ResultSpecification_implTest.java         |    8 +-
 .../impl/TaeDescription_implTest.java              |    6 +-
 .../uima/analysis_engine/impl/TestAnnotator2.java  |   18 +-
 .../impl/metadata/SofaMapping_implTest.java        |    6 +-
 .../sequencer/SequencerCapabilityLanguageTest.java |    6 +-
 .../impl/sequencer/SequencerFixedTest.java         |   18 +-
 .../impl/sequencer/SequencerTestAnnotator.java     |    3 +-
 .../uima/cas/impl/BinaryCasSerDesPerformance.java  |    4 +-
 .../cas/impl/CasPerformanceTuningSettingsTest.java |   79 -
 .../java/org/apache/uima/cas/impl/CasPoolTest.java |   12 +-
 .../apache/uima/cas/impl/CasResetResizeTest.java   |  127 -
 .../uima/cas/impl/CasTypeSystemMapperTst.java      |  463 +-
 .../apache/uima/cas/impl/CommonAuxHeapTest.java    |  106 -
 .../apache/uima/cas/impl/ComponentInfoTest.java    |    4 +-
 .../impl/ConcurrentBinarySerializationTest.java    |  127 +
 .../org/apache/uima/cas/impl/FSBagIndexTest.java   |   99 +-
 .../org/apache/uima/cas/impl/FeaturePathTest.java  |   36 +-
 .../java/org/apache/uima/cas/impl/Id2FSTest.java   |  111 +
 .../cas/impl/IndexCorruptionReportingTest.java     |   19 +-
 .../org/apache/uima/cas/impl/JCasReinitTest.java   |   95 +
 .../uima/cas/impl/OrderedFsSet_array_test.java     |  220 +
 .../org/apache/uima/cas/impl/SelectFsTest.java     |  302 +
 .../apache/uima/cas/impl/SelectFsTestNoJCas.java   |   66 +
 .../java/org/apache/uima/cas/impl/SerDesTest4.java | 1128 ++-
 .../java/org/apache/uima/cas/impl/SerDesTest6.java |  648 +-
 .../org/apache/uima/cas/impl/SerDesTstCommon.java  |    9 +-
 .../uima/cas/impl/UnambiguousIteratorTest.java     |    6 +-
 .../apache/uima/cas/impl/XCASDeserializerTest.java |  118 +-
 .../uima/cas/impl/XmiCasDeserializerTest.java      |  355 +-
 .../apache/uima/cas/impl/XmiCasSerializerTest.java |    4 +-
 .../java/org/apache/uima/cas/impl/XmiCompare.java  |  530 ++
 .../apache/uima/cas/test/AnnotationIndexTest.java  |  153 +-
 .../uima/cas/test/AnnotationIteratorTest.java      |  639 +-
 .../apache/uima/cas/test/AnnotationTreeTest.java   |   21 +-
 .../java/org/apache/uima/cas/test/ArrayFSTest.java |    6 +-
 .../org/apache/uima/cas/test/ArrayIndexTest.java   |    4 +-
 .../org/apache/uima/cas/test/CASInitializer.java   |   14 +-
 .../java/org/apache/uima/cas/test/CASTest.java     |    9 +-
 .../org/apache/uima/cas/test/CASTestSetup.java     |   55 +-
 .../uima/cas/test/CompleteSerializationTest.java   |  107 +-
 .../org/apache/uima/cas/test/CrossAnnotation.java  |  151 +-
 .../apache/uima/cas/test/CrossAnnotation_Type.java |   94 -
 .../apache/uima/cas/test/FeatureStructureTest.java |  267 +-
 .../apache/uima/cas/test/FilteredIteratorTest.java |   51 +-
 .../org/apache/uima/cas/test/FloatArrayFSTest.java |    6 +-
 .../apache/uima/cas/test/GetAllIndexedTest.java    |    8 +-
 .../apache/uima/cas/test/GrowingTheCasTest.java    |  103 +-
 .../cas/test/GrowingTheCasTestNoJcasCache.java     |   73 +-
 .../apache/uima/cas/test/IndexComparitorTest.java  |   67 +-
 .../uima/cas/test/IndexRepositoryMergingTest.java  |  114 +
 .../apache/uima/cas/test/IndexRepositoryTest.java  |  128 +-
 .../uima/cas/test/IndexSerializationTest.java      |    9 +-
 .../org/apache/uima/cas/test/IntArrayFSTest.java   |    6 +-
 .../org/apache/uima/cas/test/IteratorTest.java     |  360 +-
 .../apache/uima/cas/test/IteratorTestSorted.java   |  154 +-
 .../apache/uima/cas/test/JCasClassLoaderTest.java  |    6 -
 .../org/apache/uima/cas/test/JcasSofaTest.java     |   18 +-
 .../java/org/apache/uima/cas/test/Level_1.java     |  252 +-
 .../org/apache/uima/cas/test/Level_1_Type.java     |  111 -
 .../java/org/apache/uima/cas/test/Level_2.java     |  186 +-
 .../org/apache/uima/cas/test/Level_2_Type.java     |   80 -
 .../java/org/apache/uima/cas/test/Level_3.java     |  186 +-
 .../org/apache/uima/cas/test/Level_3_Type.java     |   80 -
 .../java/org/apache/uima/cas/test/Level_4.java     |  186 +-
 .../org/apache/uima/cas/test/Level_4_Type.java     |   80 -
 .../java/org/apache/uima/cas/test/Level_5.java     |  186 +-
 .../org/apache/uima/cas/test/Level_5_Type.java     |   80 -
 .../java/org/apache/uima/cas/test/Level_6.java     |  186 +-
 .../org/apache/uima/cas/test/Level_6_Type.java     |   80 -
 .../uima/cas/test/NewPrimitiveTypesTest.java       |   55 +-
 .../java/org/apache/uima/cas/test/SelectTest.java  |   66 +
 .../java/org/apache/uima/cas/test/Sentence.java    |  101 +-
 .../org/apache/uima/cas/test/Sentence_Type.java    |   74 -
 .../uima/cas/test/SerializationNoMDTest.java       |   26 +-
 .../uima/cas/test/SerializationReinitTest.java     |   40 +-
 .../java/org/apache/uima/cas/test/SofaTest.java    |   61 +-
 .../org/apache/uima/cas/test/StringArrayTest.java  |   10 +-
 .../uima/cas/test/StringSubtypeAnnotation.java     |  104 +-
 .../cas/test/StringSubtypeAnnotation_Type.java     |   96 -
 .../apache/uima/cas/test/StringSubtypeTest.java    |    4 +-
 .../org/apache/uima/cas/test/SubiteratorTest.java  |   11 +-
 .../test/java/org/apache/uima/cas/test/Token.java  |  101 +-
 .../java/org/apache/uima/cas/test/Token_Type.java  |   74 -
 .../org/apache/uima/cas/test/TypeOrderTest.java    |    9 +-
 .../org/apache/uima/cas/test/TypePriorityTest.java |   12 +-
 .../apache/uima/cas/test/TypeSystemReinitTest.java |   10 +-
 .../org/apache/uima/cas/test/TypeSystemTest.java   |   88 +-
 .../apache/uima/cas/test/TypeSystemUtilsTest.java  |   18 +-
 .../org/apache/uima/cas_data/impl/CasComparer.java |  211 +-
 .../uima/cas_data/impl/CasDataToXCasTest.java      |    6 +-
 .../cas_data/impl/XCasToCasDataSaxHandlerTest.java |    6 +-
 .../impl/CasConsumerDescription_implTest.java      |    6 +-
 .../impl/CasInitializerDescription_implTest.java   |    6 +-
 .../impl/CollectionReaderDescription_implTest.java |    6 +-
 .../uima/flow/impl/FixedFlowControllerTest.java    |   11 +-
 .../uima/impl/AnalysisEngineFactory_implTest.java  |    4 +-
 .../uima/impl/CasConsumerFactory_implTest.java     |    4 +-
 .../impl/CollectionReaderFactory_implTest.java     |    4 +-
 .../CustomResourceSpecifierFactory_implTest.java   |    4 +-
 .../org/apache/uima/impl/SomeCustomResource.java   |    6 +-
 .../org/apache/uima/impl/UimaContext_implTest.java |   28 +-
 .../uima/internal/util/AnalysisEnginePoolTest.java |    6 +-
 .../uima/internal/util/Int2IntHashMapTest.java     |  103 -
 .../apache/uima/internal/util/Int2IntPerfTest.java |  153 -
 .../uima/internal/util/Int2ObjHashMapTest.java     |  133 +
 .../apache/uima/internal/util/IntBitSetTest.java   |   24 +-
 .../uima/internal/util/IntHashSetPerfTest.java     |   27 +-
 .../apache/uima/internal/util/IntHashSetTest.java  |  129 +-
 .../apache/uima/internal/util/IntVectorTest.java   |    6 +-
 .../org/apache/uima/internal/util/MiscTest.java    |   44 +
 .../uima/internal/util/MultiThreadUtils.java       |   11 +-
 .../internal/util/Obj2IntIdentityHashMapTest.java  |  147 +
 .../apache/uima/internal/util/ObjHashSetTest.java  |  185 +
 .../uima/internal/util/PositiveIntSetTest.java     |   10 +-
 .../uima/internal/util/ResourcePoolTest.java       |    6 +-
 .../uima/internal/util/UIMAClassLoaderTest.java    |   66 +-
 .../internal/util/rb_trees/Int2IntRBTtest.java     |    8 +-
 .../internal/util/rb_trees/IntArrayRBTtest.java    |    7 +-
 .../uima/jcas/impl/JCasHashMapCompareTest.java     |  136 +-
 .../org/apache/uima/jcas/impl/JCasHashMapTest.java |  295 +-
 .../org/apache/uima/jcas/tcas/AnnotationTest.java  |  205 +
 .../org/apache/uima/jcas/test/CASInitializer.java  |    9 +-
 .../org/apache/uima/jcas/test/CASTestSetup.java    |   33 +-
 .../org/apache/uima/jcas/test/FSArrayListTest.java |   93 +
 .../org/apache/uima/jcas/test/FSHashSetTest.java   |  118 +
 .../uima/jcas/test/IntegerArrayListTest.java       |   91 +
 .../java/org/apache/uima/jcas/test/JCasTest.java   |  346 +-
 .../java/org/apache/uima/jcas/test/JCasTest2.java  |  128 +
 .../java/org/apache/uima/jcas/test/generatedx.xml  |   38 +-
 .../uima/pear/util/ComponentCategoryTest.java      |    4 +-
 .../apache/uima/pear/util/PearEncodingTest.java    |    4 +-
 .../apache/uima/pear/util/PearInstallerTest.java   |    6 +-
 .../org/apache/uima/pear/util/PearRuntimeTest.java |   17 +-
 .../util/TestPearInstallationVerification.java     |    1 -
 .../resource/ConfigurableResource_implTest.java    |   42 +-
 .../uima/resource/impl/CasManager_implTest.java    |    4 +-
 ...ConfigurableDataResourceSpecifier_implTest.java |    7 +-
 .../impl/ConfigurableDataResource_implTest.java    |    4 +-
 .../uima/resource/impl/DataResource_implTest.java  |    9 +-
 .../impl/FileLanguageResource_implTest.java        |    6 +-
 .../uima/resource/impl/PearSpecifier_implTest.java |    6 +-
 .../impl/RelativePathResolver_implTest.java        |    4 +-
 .../impl/ResourceCreationSpecifier_implTest.java   |    4 +-
 .../resource/impl/ResourceManager_implTest.java    |   14 +-
 .../resource/impl/TestResourceInterface_impl.java  |    3 +-
 .../uima/resource/impl/URISpecifier_implTest.java  |    4 +-
 ...onfigurationParameterDeclarations_implTest.java |    6 +-
 .../metadata/impl/FsIndexCollection_implTest.java  |    5 +-
 .../resource/metadata/impl/Import_implTest.java    |    4 +-
 .../metadata/impl/MetaDataObject_implTest.java     |   30 +-
 .../ResourceManagerConfiguration_implTest.java     |    5 +-
 .../resource/metadata/impl/TestFruitBagObject.java |    2 +-
 .../resource/metadata/impl/TestFruitObject.java    |    4 +-
 .../metadata/impl/TypePriorities_implTest.java     |    5 +-
 .../impl/TypeSystemDescription_implTest.java       |    7 +-
 .../impl/ResourceServiceAdapter_implTest.java      |    6 +-
 .../service/impl/ResourceService_implTest.java     |    6 +-
 .../uima/testTypeSystem_arrays/OfShorts.java       |  123 +-
 .../uima/testTypeSystem_arrays/OfShorts_Type.java  |  116 -
 .../uima/testTypeSystem_arrays/OfStrings.java      |  123 +-
 .../uima/testTypeSystem_arrays/OfStrings_Type.java |  116 -
 .../java/org/apache/uima/util/CasCopierTest.java   |   74 +-
 .../org/apache/uima/util/CasCreationUtilsTest.java |   18 +-
 .../uima/util/CasIOUtilsAlwaysHoldOnTest.java      |   80 +
 .../java/org/apache/uima/util/CasIOUtilsTest.java  |   69 +-
 .../org/apache/uima/util/CasToInlineXmlTest.java   |    8 +-
 .../org/apache/uima/util/CasWrapperForTstng.java   |    6 +-
 .../test/java/org/apache/uima/util/LevelTest.java  |    2 +-
 .../org/apache/uima/util/TypeSystemUtilTest.java   |    4 +-
 .../org/apache/uima/util/XMLSerializerTest.java    |    7 +-
 .../uima/util/impl/JSR47Logger_implTest.java       |   42 +-
 .../org/apache/uima/util/impl/Logger_implTest.java |   11 +-
 .../org/apache/uima/util/impl/LoggingTest.java     |   20 +-
 .../apache/uima/util/impl/OptimizeStringsTest.java |   57 +-
 .../uima/util/impl/ProcessTrace_implTest.java      |    6 +-
 .../uima/util/impl/TestLog4jLogger_impl.java       |  200 +-
 .../apache/uima/util/impl/XMLParser_implTest.java  |   15 +-
 .../src/test/java/sofa/test/CrossAnnotation.java   |  142 +
 uimaj-core/src/test/java/x/y/z/EndOfSentence.java  |  111 +-
 .../src/test/java/x/y/z/EndOfSentence_Type.java    |   66 -
 uimaj-core/src/test/java/x/y/z/Sentence.java       |  146 +-
 uimaj-core/src/test/java/x/y/z/Sentence_Type.java  |   67 -
 uimaj-core/src/test/java/x/y/z/Separator.java      |  117 +-
 uimaj-core/src/test/java/x/y/z/Separator_Type.java |   66 -
 uimaj-core/src/test/java/x/y/z/Token.java          |  331 +-
 uimaj-core/src/test/java/x/y/z/TokenType.java      |  119 +-
 uimaj-core/src/test/java/x/y/z/TokenType_Type.java |   67 -
 uimaj-core/src/test/java/x/y/z/Token_Type.java     |  196 -
 uimaj-core/src/test/java/x/y/z/Word.java           |  117 +-
 uimaj-core/src/test/java/x/y/z/Word_Type.java      |   66 -
 .../resources/CASTests/desc/ArrayIndexTest.xml     |  192 +-
 .../CASTests/desc/casTestCaseTypesystem.xml        |    3 +
 .../src/test/resources/CASTests/desc/levels.xml    |   65 -
 .../testTypeSystem_small_withMixedRefs.xml         |   52 +
 .../ExampleCas/testTypeSystem_t_1_feature.xml      |   35 +
 .../ExampleCas/testTypeSystem_t_nofeatures.xml     |   32 +
 .../testTypeSystem_token_no_features.xml           |   28 +
 .../testTypeSystem_token_sentence_no_features.xml  |   34 +
 .../testTypeSystem_token_sentence_no_jcas.xml      |   34 +
 .../resources/ExtraTests/UIMA-5961/peartest.zip    |  Bin 0 -> 14727 bytes
 .../test/resources/ExtraTests/UIMA-5961/readme.txt |    2 +
 .../ExtraTests/UIMA-6057/classloadertest.zip       |  Bin 0 -> 120421 bytes
 .../test/resources/ExtraTests/UIMA-6057/readme.txt |    2 +
 .../src/test/resources/ExtraTests/readme.txt       |    6 +
 .../test/resources/JCasGen/typeSystemAllKinds.xml  |  130 +
 uimaj-core/src/test/resources/log4j2.xml           |   36 +
 .../uima/util/impl/logger_test_messages.properties |    2 +-
 .../src/test/resources/pearTests/DateTime.pear     |  Bin 38739 -> 23719 bytes
 .../src/test/resources/pearTests/RoomNumber.pear   |  Bin 35953 -> 10760 bytes
 .../test/resources/pearTests/analysisEngine.pear   |  Bin 17062 -> 14437 bytes
 .../test/resources/pearTests/analysisEngine2.pear  |  Bin 16580 -> 15123 bytes
 .../src/test/resources/pearTests/casConsumer.pear  |  Bin 13642 -> 11099 bytes
 .../src/test/resources/pearTests/pearSofaMap.pear  |  Bin 3718 -> 11250 bytes
 .../src/test/resources/pearTests/typeSystem.pear   |  Bin 14753 -> 37220 bytes
 uimaj-cpe/.gitignore                               |    3 +
 uimaj-cpe/checkpoint.dat.prev                      |  Bin 971 -> 0 bytes
 uimaj-cpe/pom.xml                                  |   16 +-
 .../cas_data/impl/vinci/VinciCasDataConverter.java |   73 +-
 .../uima/collection/impl/cpm/BaseCPMImpl.java      |  188 +-
 .../uima/collection/impl/cpm/Checkpoint.java       |   87 +-
 .../collection/impl/cpm/container/CPEFactory.java  |  169 +-
 .../CasObjectNetworkCasProcessorImpl.java          |   47 +-
 .../cpm/container/ProcessingContainer_Impl.java    |  243 +-
 .../container/deployer/CPEDeployerDefaultImpl.java |   29 +-
 .../cpm/container/deployer/JavaApplication.java    |   23 +-
 .../container/deployer/RunnableApplication.java    |   23 +-
 .../impl/cpm/container/deployer/VinciTAP.java      |  111 +-
 .../deployer/socket/OFSocketTransportImpl.java     |   11 +-
 .../deployer/socket/ProcessControllerAdapter.java  |   10 +-
 .../socket/SocketCasProcessorDeployer.java         |   35 +-
 .../container/deployer/socket/SocketTransport.java |   27 +-
 .../deployer/vinci/VinciCasProcessorDeployer.java  |  111 +-
 .../impl/cpm/container/deployer/vns/LocalVNS.java  |   35 +-
 .../impl/cpm/engine/ArtifactProducer.java          |   87 +-
 .../impl/cpm/engine/BoundedWorkQueue.java          |   25 +-
 .../collection/impl/cpm/engine/CPECasPool.java     |   19 +-
 .../impl/cpm/engine/CPMChunkTimeoutException.java  |   21 +-
 .../uima/collection/impl/cpm/engine/CPMEngine.java |  394 +-
 .../collection/impl/cpm/engine/CPMThreadGroup.java |   34 +-
 .../impl/cpm/engine/ConsumerCasUtils.java          |   22 +-
 .../impl/cpm/engine/DebugControlThread.java        |   56 +-
 .../impl/cpm/engine/NonThreadedProcessingUnit.java |  205 +-
 .../collection/impl/cpm/engine/ProcessingUnit.java |  424 +-
 .../collection/impl/cpm/engine/SequencedQueue.java |   28 +-
 .../uima/collection/impl/cpm/engine/WorkUnit.java  |   36 +
 .../uima/collection/impl/cpm/utils/CPMUtils.java   |   62 +-
 .../collection/impl/cpm/utils/CasMetaData.java     |   23 +-
 .../collection/impl/cpm/utils/ChunkMetadata.java   |   67 +
 .../impl/cpm/utils/ConfigurableFeature.java        |   62 +
 .../impl/cpm/utils/CpmLocalizedMessage.java        |   12 +
 .../uima/collection/impl/cpm/utils/Execute.java    |   23 +-
 .../collection/impl/cpm/utils/ExpirationTimer.java |    7 +
 .../uima/collection/impl/cpm/utils/FeatureMap.java |   37 +
 .../uima/collection/impl/cpm/utils/Filter.java     |  150 +-
 .../uima/collection/impl/cpm/utils/JavaTimer.java  |   41 +-
 .../collection/impl/cpm/utils/QueueEntity.java     |    8 +
 .../uima/collection/impl/cpm/utils/Timer.java      |   36 +-
 .../collection/impl/cpm/utils/TimerFactory.java    |   20 +-
 .../cpm/utils/TypeComplianceConverterImpl.java     |    6 +
 .../uima/collection/impl/cpm/utils/ValuePair.java  |   13 +
 .../collection/impl/cpm/vinci/DATACasUtils.java    |  115 +-
 .../uima/collection/impl/cpm/vinci/Vinci.java      |   57 +-
 ...rocessorConfigurationParameterSettingsImpl.java |   24 +
 .../impl/metadata/cpe/CasProcessorCpeObject.java   |  161 +-
 .../cpe/CasProcessorDeploymentParamImpl.java       |   43 +-
 .../cpe/CasProcessorDeploymentParamsImpl.java      |   30 +-
 .../cpe/CasProcessorErrorHandlingImpl.java         |   22 +
 .../cpe/CasProcessorErrorRateThresholdImpl.java    |   51 +-
 .../impl/metadata/cpe/CasProcessorExecArgImpl.java |   40 +-
 .../metadata/cpe/CasProcessorExecArgsImpl.java     |   14 +
 .../metadata/cpe/CasProcessorExecutableImpl.java   |   95 +-
 .../impl/metadata/cpe/CasProcessorFilterImpl.java  |   43 +-
 .../metadata/cpe/CasProcessorMaxRestartsImpl.java  |   49 +-
 .../cpe/CasProcessorRunInSeperateProcessImpl.java  |   22 +-
 .../cpe/CasProcessorRuntimeEnvParamImpl.java       |   46 +-
 .../impl/metadata/cpe/CasProcessorTimeoutImpl.java |   50 +-
 .../impl/metadata/cpe/CpeCasProcessorsImpl.java    |   72 +-
 .../impl/metadata/cpe/CpeCheckpointImpl.java       |   51 +-
 .../cpe/CpeCollectionReaderCasInitializerImpl.java |   30 +
 .../impl/metadata/cpe/CpeCollectionReaderImpl.java |   25 +
 .../cpe/CpeCollectionReaderIteratorImpl.java       |   26 +
 .../metadata/cpe/CpeComponentDescriptorImpl.java   |   26 +
 .../impl/metadata/cpe/CpeConfigurationImpl.java    |   62 +
 .../impl/metadata/cpe/CpeDescriptionImpl.java      |  118 +-
 .../impl/metadata/cpe/CpeDescriptorFactory.java    |  189 +-
 .../impl/metadata/cpe/CpeIncludeImpl.java          |   39 +-
 .../cpe/CpeIntegratedCasProcessorImpl.java         |   13 +
 .../metadata/cpe/CpeLocalCasProcessorImpl.java     |   82 +-
 .../collection/impl/metadata/cpe/CpeObject.java    |   21 +
 .../metadata/cpe/CpeRemoteCasProcessorImpl.java    |   13 +
 .../cpe/CpeResourceManagerConfigurationImpl.java   |   37 +-
 .../impl/metadata/cpe/CpeSofaMappingImpl.java      |   40 +-
 .../impl/metadata/cpe/CpeSofaMappingsImpl.java     |   31 +-
 .../collection/impl/metadata/cpe/CpeTimerImpl.java |   13 +
 .../impl/metadata/cpe/NameValuePairImpl.java       |   32 +
 .../impl/metadata/cpe/OutputQueue_impl.java        |   40 +-
 .../java/org/apache/uima/cas/impl/CasTestUtil.java |    4 +-
 .../impl/CasHeapSizeTestCollectionReader.java      |    5 +-
 .../impl/cpm/utils/DescriptorMakeUtil.java         |   10 +-
 .../impl/cpm/utils/ErrorTestAnnotator.java         |    5 +-
 .../impl/cpm/utils/ErrorTestCasConsumer.java       |    2 +-
 .../impl/cpm/utils/ErrorTestCollectionReader.java  |    4 +-
 .../test/resources/pearTests/pearForCPMtest.pear   |  Bin 18537 -> 19067 bytes
 uimaj-document-annotation/pom.xml                  |   16 +-
 .../apache/uima/jcas/tcas/DocumentAnnotation.java  |   45 +-
 .../uima/jcas/tcas/DocumentAnnotation_Type.java    |   89 -
 .../java/org/apache/uima/jcas/tcas/DocMeta.java    |  163 +-
 .../org/apache/uima/jcas/tcas/DocMeta_Type.java    |  307 -
 .../uima/jcas/tcas/DocumentAnnotationTest.java     |   22 +-
 .../ExampleCas/testTypeSystem_docmetadata.xml      |    3 +-
 uimaj-eclipse-feature-runtime/feature.properties   |    2 +-
 uimaj-eclipse-feature-runtime/pom.xml              |    9 +-
 .../src/main/resources/feature.xml                 |    5 +
 uimaj-eclipse-feature-tools/feature.properties     |    2 +-
 uimaj-eclipse-feature-tools/pom.xml                |    9 +-
 uimaj-eclipse-update-site/pom.xml                  |  592 +-
 uimaj-ep-cas-editor-ide/pom.xml                    |   19 +-
 .../uima/caseditor/ide/CasEditorIdePlugin.java     |   12 +-
 .../caseditor/ide/CasEditorIdePreferencePage.java  |   11 +-
 .../caseditor/ide/CasEditorPerspectiveFactory.java |    1 -
 .../caseditor/ide/CasEditorPreferencePage.java     |    2 -
 .../caseditor/ide/DefaultCasDocumentProvider.java  |   26 +-
 .../org/apache/uima/caseditor/ide/NlpProject.java  |    2 +-
 .../caseditor/ide/WorkspaceResourceDialog.java     |    3 +-
 .../TypeSystemSearchStrategyFactory.java           |    2 +-
 .../wizards/DocumentImportStructureProvider.java   |   48 +-
 .../ide/wizards/ImportDocumentWizard.java          |    4 +-
 .../ide/wizards/ImportDocumentWizardPage.java      |   11 +-
 uimaj-ep-cas-editor/pom.xml                        |   19 +-
 .../editor/annotation/EclipseAnnotationPeer.java   |    2 +-
 .../fsview/FeatureStructureLabelProvider.java      |    3 +-
 .../editor/outline/AnnotationTreeNode.java         |    2 +-
 .../core/model/dotcorpus/AnnotationStyleTest.java  |   10 +-
 .../uima/caseditor/editor/util/SpanTest.java       |   33 +-
 uimaj-ep-configurator/pom.xml                      |   26 +-
 .../uima/taeconfigurator/CDEpropertyPage.java      |   68 +
 .../uima/taeconfigurator/InternalErrorCDE.java     |   23 +
 .../org/apache/uima/taeconfigurator/Messages.java  |   21 +
 .../uima/taeconfigurator/PreferencePage.java       |   22 +
 .../uima/taeconfigurator/StandardStrings.java      |   16 +
 .../taeconfigurator/TAEConfiguratorPlugin.java     |   59 +-
 .../uima/taeconfigurator/editors/Form2Panel.java   |   13 +-
 .../taeconfigurator/editors/MultiPageEditor.java   | 1171 ++-
 .../editors/MultiPageEditorContributor.java        |  135 +-
 .../editors/point/IUimaEditorExtension.java        |    4 +-
 .../editors/point/IUimaMultiPageEditor.java        |   20 +-
 .../editors/ui/AbstractImportablePartSection.java  |    2 +-
 .../editors/ui/AbstractSectionParm.java            |  332 +-
 .../taeconfigurator/editors/ui/AggregatePage.java  |   28 +-
 .../taeconfigurator/editors/ui/CapabilityPage.java |   20 +-
 .../editors/ui/ExtnlResBindSection.java            |  114 +-
 .../editors/ui/FileAndShortName.java               |   12 +
 .../taeconfigurator/editors/ui/FlowSection.java    |  100 +-
 .../taeconfigurator/editors/ui/GeneralSection.java |   27 +-
 .../taeconfigurator/editors/ui/HeaderPage.java     |  164 +-
 .../editors/ui/HeaderPageWithSash.java             |   32 +-
 .../editors/ui/ImportResBindSection.java           |   50 +-
 .../taeconfigurator/editors/ui/ImportSection.java  |  110 +-
 .../editors/ui/IndexImportSection.java             |   40 +-
 .../taeconfigurator/editors/ui/IndexesPage.java    |   34 +
 .../editors/ui/MetaDataSection.java                |   27 +-
 .../taeconfigurator/editors/ui/OverviewPage.java   |   26 +-
 .../taeconfigurator/editors/ui/ParameterPage.java  |   26 +-
 .../editors/ui/ParameterSettingsSection.java       |   31 +-
 .../editors/ui/PrimitiveSection.java               |   32 +-
 .../editors/ui/ResourceDependencySection.java      |  115 +-
 .../taeconfigurator/editors/ui/ResourcesPage.java  |   32 +-
 .../taeconfigurator/editors/ui/SettingsPage.java   |   26 +-
 .../editors/ui/TypeImportSection.java              |   35 +
 .../uima/taeconfigurator/editors/ui/TypePage.java  |   26 +-
 .../editors/ui/TypePriorityImportSection.java      |   40 +-
 .../uima/taeconfigurator/editors/ui/Utility.java   |  133 +-
 .../taeconfigurator/editors/ui/ValueSection.java   |   79 +-
 .../ui/dialogs/AbstractDialogKeyVerify.java        |   38 +-
 .../dialogs/AbstractDialogKeyVerifyJavaNames.java  |   30 +-
 .../editors/ui/dialogs/AddAllowedValueDialog.java  |   41 +-
 .../AddExternalResourceDependencyDialog.java       |   58 +-
 .../ui/dialogs/AddExternalResourceDialog.java      |   50 +-
 .../editors/ui/dialogs/AddFeatureDialog.java       |   94 +-
 .../editors/ui/dialogs/AddIndexDialog.java         |   97 +-
 .../editors/ui/dialogs/AddIndexKeyDialog.java      |   60 +-
 .../editors/ui/dialogs/AddParameterDialog.java     |   58 +-
 .../editors/ui/dialogs/AddRemoteServiceDialog.java |  151 +-
 .../editors/ui/dialogs/AddSofaDialog.java          |   54 +
 .../editors/ui/dialogs/AddTypeDialog.java          |   48 +-
 .../ui/dialogs/AddTypeToPriorityListDialog.java    |   40 +-
 .../editors/ui/dialogs/CommonInputDialog.java      |   57 +
 .../editors/ui/dialogs/ContentAssistField32.java   |   16 +
 .../editors/ui/dialogs/EditSofaBindingsDialog.java |   28 +
 .../ui/dialogs/ExportImportablePartDialog.java     |   63 +
 .../editors/ui/dialogs/FindComponentDialog.java    |   63 +
 .../editors/ui/dialogs/PickTaeForTypesDialog.java  |   60 +-
 .../editors/ui/dialogs/ResourcePickerDialog.java   |   47 +
 .../editors/ui/dialogs/SearchMonitoringThread.java |   18 +
 .../editors/ui/dialogs/SearchThread.java           |  106 +
 .../editors/ui/dialogs/SelectTypeDialog.java       |   32 +
 .../editors/ui/dialogs/TypesWithNameSpaces.java    |   10 +
 .../editors/ui/dialogs/TypesWithNameSpaces32.java  |   50 +
 .../taeconfigurator/editors/xml/ColorManager.java  |   14 +
 .../editors/xml/IXMLColorConstants.java            |   10 +
 .../editors/xml/NonRuleBasedDamagerRepairer.java   |   26 +-
 .../uima/taeconfigurator/editors/xml/TagRule.java  |   13 +
 .../editors/xml/XMLConfiguration.java              |   46 +-
 .../editors/xml/XMLDocumentProvider.java           |    8 +
 .../editors/xml/XMLDoubleClickStrategy.java        |   28 +
 .../taeconfigurator/editors/xml/XMLEditor.java     |   45 +-
 .../editors/xml/XMLPartitionScanner.java           |   11 +
 .../taeconfigurator/editors/xml/XMLScanner.java    |    9 +
 .../taeconfigurator/editors/xml/XMLTagScanner.java |    9 +
 .../editors/xml/XMLWhitespaceDetector.java         |    8 +
 .../files/ContextForPartDialog.java                |   28 +
 .../files/MultiResourceSelectionDialog.java        |  101 +-
 ...MultiResourceSelectionDialogWithFlowOption.java |   30 +-
 .../files/PickOverrideKeysAndParmName.java         |   50 +-
 .../taeconfigurator/model/AbstractModelPart.java   |   14 +
 .../uima/taeconfigurator/model/AllTypes.java       |   15 +-
 .../uima/taeconfigurator/model/BuiltInTypes.java   |    8 +-
 .../uima/taeconfigurator/model/ConfigGroup.java    |   52 +
 .../model/DefinedTypesWithSupers.java              |   12 +
 .../taeconfigurator/model/DescriptorMetaData.java  |   47 +
 .../uima/taeconfigurator/model/DescriptorTCAS.java |   24 +-
 .../uima/taeconfigurator/model/FlowNodes.java      |   18 +
 .../taeconfigurator/wizards/AbstractNewWizard.java |   43 +
 .../wizards/AbstractNewWizardPage.java             |   51 +-
 .../wizards/CasConsumerNewWizard.java              |   12 +
 .../wizards/CasConsumerNewWizardPage.java          |    6 +
 .../wizards/CasInitializerNewWizard.java           |   12 +
 .../wizards/CasInitializerNewWizardPage.java       |    6 +
 .../wizards/CollectionReaderNewWizard.java         |   12 +
 .../wizards/CollectionReaderNewWizardPage.java     |    6 +
 .../wizards/FlowControllerNewWizard.java           |   12 +
 .../wizards/FlowControllerNewWizardPage.java       |    6 +
 .../wizards/FsIndexCollectionNewWizard.java        |   15 +-
 .../wizards/FsIndexCollectionNewWizardPage.java    |    6 +
 .../ResourceManagerConfigurationNewWizard.java     |   15 +-
 .../ResourceManagerConfigurationNewWizardPage.java |    6 +
 .../wizards/TAEConfiguratorNewWizard.java          |   12 +
 .../wizards/TAEConfiguratorNewWizardPage.java      |    6 +
 .../wizards/TypePrioritiesNewWizard.java           |   15 +-
 .../wizards/TypePrioritiesNewWizardPage.java       |    6 +
 .../wizards/TypeSystemNewWizard.java               |   15 +-
 .../wizards/TypeSystemNewWizardPage.java           |    6 +
 uimaj-ep-debug/pom.xml                             |   10 +-
 .../java/org/apache/uima/ep_debug/DebugPlugin.java |    4 +-
 uimaj-ep-jcasgen/pom.xml                           |   61 +-
 .../uima/jcas/jcasgenp/EP_LogThrowErrorImpl.java   |    6 +
 .../org/apache/uima/jcas/jcasgenp/JgPlugin.java    |   16 +-
 .../apache/uima/jcas/jcasgenp/JgPluginRunner.java  |   15 +-
 .../org/apache/uima/jcas/jcasgenp/MergerImpl.java  |   11 +
 .../uima/jcas/jcasgenp/ProgressMonitorImpl.java    |   47 +
 uimaj-ep-launcher/pom.xml                          |   19 +-
 .../AnalysisEngineLaunchConfigurationDelegate.java |    2 +-
 .../apache/uima/ep_launcher/LauncherPlugin.java    |   33 +-
 .../apache/uima/ep_launcher/RemoteLauncher.java    |   20 +-
 .../uima/ep_launcher/ui/AnalysisEngineMainTab.java |    8 +-
 uimaj-ep-pear-packager/pom.xml                     |   18 +-
 .../java/org/apache/uima/pear/PearException.java   |   36 +-
 .../main/java/org/apache/uima/pear/PearPlugin.java |   18 +-
 .../uima/pear/actions/AddUimaNatureAction.java     |   26 +-
 .../actions/EditInstallationDescriptorAction.java  |   20 +-
 .../uima/pear/actions/GeneratePearFileAction.java  |   20 +-
 .../actions/PearProjectCustomizationException.java |   57 +-
 .../uima/pear/generate/GeneratePearWizard.java     |   42 +-
 .../org/apache/uima/pear/generate/PearExport.java  |    9 +-
 .../uima/pear/generate/PearExportMessages.java     |   12 +-
 .../uima/pear/generate/PearExportOperation.java    |   35 +-
 .../pear/generate/PearFileResourceExportPage.java  |   87 +-
 .../edit/EditInstallationDescriptorWizard.java     |   36 +-
 .../uima/pear/insd/edit/INSDComponentPage.java     |   97 +-
 .../uima/pear/insd/edit/INSDEnvironmentPage.java   |   99 +-
 .../apache/uima/pear/insd/edit/InsdConstants.java  |   12 +
 .../pear/insd/edit/PearInstallationDescriptor.java |   23 +-
 .../edit/vars/AbstractVarValViewerHandler.java     |   97 +-
 .../pear/insd/edit/vars/IVarValListViewer.java     |   23 +-
 .../apache/uima/pear/insd/edit/vars/VarVal.java    |   34 +-
 .../pear/insd/edit/vars/VarValCellModifier.java    |   32 +-
 .../pear/insd/edit/vars/VarValLabelProvider.java   |   19 +-
 .../uima/pear/insd/edit/vars/VarValList.java       |   56 +-
 .../uima/pear/insd/edit/vars/VarValSorter.java     |    8 +-
 .../pear/insd/edit/vars/VarValViewerHandler.java   |   32 +-
 .../apache/uima/pear/nature/ProjectCustomizer.java |    3 +-
 uimaj-ep-runtime/pom.xml                           |  537 +-
 uimaj-examples/pom.xml                             |  130 +-
 uimaj-examples/src/main/eclipseProject/classpath   |   13 +-
 .../src/main/java/example/PersonTitle.java         |  178 +-
 .../org/apache/uima/examples/PrintAnnotations.java |   30 +-
 .../main/java/org/apache/uima/examples/RunAE.java  |   41 +-
 .../uima/examples/SofaExampleApplication.java      |   61 +-
 .../uima/examples/SourceDocumentInformation.java   |  449 +-
 .../examples/SourceDocumentInformation_Type.java   |  219 -
 .../java/org/apache/uima/examples/XmlDetagger.java |   14 +-
 .../uima/examples/cas/PersonTitleAnnotator.java    |   49 +-
 .../apache/uima/examples/cas/RegExAnnotator.java   |   21 +-
 .../CasMultiplierExampleApplication.java           |    1 +
 .../casMultiplier/SimpleTextSegmenter.java         |    2 +-
 .../uima/examples/cpe/AnnotationPrinter.java       |    7 +
 .../examples/cpe/FileSystemCollectionReader.java   |   29 +-
 .../uima/examples/cpe/InlineXmlCasConsumer.java    |   10 +-
 .../cpe/PersonTitleDBWriterCasConsumer.java        |   29 +
 .../org/apache/uima/examples/cpe/SimpleRunCPE.java |   29 +-
 .../org/apache/uima/examples/cpe/SimpleRunCPM.java |   21 +-
 .../uima/examples/cpe/XCasWriterCasConsumer.java   |   34 +-
 .../examples/flow/AdvancedFixedFlowController.java |   22 +-
 .../examples/flow/WhiteboardFlowController2.java   |    4 +-
 .../apache/uima/examples/tokenizer/Sentence.java   |   92 +-
 .../tokenizer/SimpleTokenAndSentenceAnnotator.java |   29 +
 .../org/apache/uima/examples/tokenizer/Token.java  |   92 +-
 .../uima/examples/xmi/Ecore2UimaTypeSystem.java    |   75 +-
 .../uima/examples/xmi/UimaTypeSystem2Ecore.java    |   94 +-
 .../uima/examples/xmi/XmiCollectionReader.java     |    8 +-
 .../uima/examples/xmi/XmiWriterCasConsumer.java    |    9 +-
 .../java/org/apache/uima/tutorial/DateAnnot.java   |  138 +-
 .../org/apache/uima/tutorial/DateTimeAnnot.java    |  193 +-
 .../java/org/apache/uima/tutorial/Meeting.java     |  398 +-
 .../java/org/apache/uima/tutorial/RoomNumber.java  |  191 +-
 .../org/apache/uima/tutorial/SentenceAnnot.java    |  129 +-
 .../java/org/apache/uima/tutorial/TimeAnnot.java   |  138 +-
 .../java/org/apache/uima/tutorial/UimaAcronym.java |  207 +-
 .../java/org/apache/uima/tutorial/UimaMeeting.java |  156 +-
 .../java/org/apache/uima/tutorial/WordAnnot.java   |  129 +-
 .../uima/tutorial/ex1/RoomNumberAnnotator.java     |   16 +-
 .../uima/tutorial/ex2/RoomNumberAnnotator.java     |    9 +-
 .../apache/uima/tutorial/ex4/MeetingAnnotator.java |   54 +-
 .../uima/tutorial/ex5/RoomNumberAnnotator.java     |    6 +-
 .../uima/tutorial/ex6/StringMapResource_impl.java  |   12 +-
 .../uima/tutorial/ex6/UimaMeetingAnnotator.java    |   14 +-
 .../UIMA CAS Visual Debugger.launch                |   80 +-
 .../UIMA Document Analyzer.launch                  |   76 +-
 .../src/main/run_configuration/UIMA JCasGen.launch |   66 +-
 .../run_configuration/UIMA PEAR Installer.launch   |   76 +-
 .../src/main/run_configuration/UIMA Run AE.launch  |   78 +-
 .../src/main/run_configuration/UIMA Run CPE.launch |   78 +-
 ...A Run V3 migrate JCas from classes roots.launch |   29 +
 ...A Run V3 migrate JCas from sources roots.launch |   29 +
 .../main/run_configuration/UIMA Start VNS.launch   |   64 +-
 .../UIMA Start Vinci Service.launch                |   78 +-
 uimaj-jet-expander/Readme.txt                      |    8 +-
 .../src/org/apache/uima/util/jet/JetExpander.java  |   17 +-
 uimaj-json/pom.xml                                 |   25 +-
 .../org/apache/uima/json/JsonCasSerializer.java    |  581 +-
 .../impl/JsonContentHandlerJacksonWrapper.java     |    8 +-
 .../apache/uima/json/JsonCasSerializerTest.java    |   20 +-
 .../apache/uima/json/JsonMetaDataObjectTest.java   |   18 +-
 .../apache/uima/json/JsonXmiCasSerializerTest.java |    2 +
 .../resource/metadata/impl/TestFruitBagObject.java |    2 +-
 .../resource/metadata/impl/TestFruitObject.java    |    4 +-
 .../test/java/org/apache/uima/test/AllTypes.java   |  471 +-
 .../java/org/apache/uima/test/AllTypes_Type.java   |  980 ---
 .../test/java/org/apache/uima/test/RefTypes.java   |   96 +-
 .../java/org/apache/uima/test/RefTypes_Type.java   |  176 -
 .../expected/json/allValuesNoOmits.txt             |    9 +-
 .../expected/json/allValuesOmits.txt               |    9 +-
 .../expected/json/allValuesStaticNoOmits.txt       |   14 +-
 .../expected/json/array-a1-not-a.txt               |   10 +-
 .../expected/json/array-a1-not-l.txt               |   21 +-
 .../expected/json/array-a2-not-a.txt               |   10 +-
 .../expected/json/array-a2-not-l.txt               |   20 +-
 .../expected/json/array-a3-not-a.txt               |   10 +-
 .../expected/json/array-a3-not-l.txt               |   18 +-
 .../expected/json/array-all-embeddable-a.txt       |   10 +-
 .../expected/json/array-all-embeddable-l.txt       |   21 +-
 .../expected/json/array-non-embeddable-a.txt       |   10 +-
 .../expected/json/array-non-embeddable-l.txt       |   17 +-
 .../json/array-self-items-all-embeddable-a.txt     |   14 +-
 .../json/array-self-items-all-embeddable-l.txt     |   18 +-
 .../expected/json/array-self-non-embeddable-a.txt  |   14 +-
 .../expected/json/array-self-non-embeddable-l.txt  |   17 +-
 .../expected/json/indexedAndRef.txt                |    6 +-
 .../expected/json/indexedSingleList.txt            |    2 +-
 .../expected/json/indexedSingleListStatic.txt      |    6 +-
 .../expected/json/multipleViews.txt                |   18 +-
 .../expected/json/nameSpaceCollision.txt           |    2 +-
 .../expected/json/nameSpaceCollision2.txt          |    2 +-
 .../expected/json/nameSpaceCollision2Omits.txt     |    2 +-
 .../expected/json/nameSpaceCollision2pp.txt        |    8 +-
 .../expected/json/nameSpaceCollision2ppOmits.txt   |    8 +-
 .../expected/json/nameSpaceCollisionOmits.txt      |    2 +-
 .../expected/json/nameSpaceCollsionFiltered.txt    |    2 +-
 .../expected/json/nameSpaceNoCollsionFiltered.txt  |    2 +-
 .../expected/json/topAndTokenOnly.txt              |    2 +-
 .../expected/json/topAndTokenOnlyNoContext.txt     |    2 +-
 .../json/topAndTokenOnlyNoExpandedTypeNames.txt    |    2 +-
 .../expected/json/topAndTokenOnlyNoSubtypes.txt    |    2 +-
 .../expected/json/topWithDefaultViewOmits.txt      |    2 +-
 .../expected/json/topWithNamedViewOmits.txt        |    2 +-
 .../expected/json/twoListMerge.txt                 |    6 +-
 .../expected/json/twoListMergeStatic.txt           |    8 +-
 .../expected/xmi/allValuesNoOmits.xml              |   20 +-
 .../expected/xmi/allValuesOmits.xml                |   20 +-
 .../expected/xmi/allValuesStaticNoOmits.xml        |   20 +-
 .../expected/xmi/array-a1-not-a.xml                |   16 +-
 .../expected/xmi/array-a1-not-l.xml                |   16 +-
 .../expected/xmi/array-a2-not-a.xml                |   16 +-
 .../expected/xmi/array-a2-not-l.xml                |   16 +-
 .../expected/xmi/array-a3-not-a.xml                |   16 +-
 .../expected/xmi/array-a3-not-l.xml                |   16 +-
 .../expected/xmi/array-all-embeddable-a.xml        |   16 +-
 .../expected/xmi/array-all-embeddable-l.xml        |   16 +-
 .../expected/xmi/array-non-embeddable-a.xml        |   16 +-
 .../expected/xmi/array-non-embeddable-l.xml        |   16 +-
 .../xmi/array-self-items-all-embeddable-a.xml      |   18 +-
 .../xmi/array-self-items-all-embeddable-l.xml      |   24 +-
 .../expected/xmi/array-self-non-embeddable-a.xml   |   18 +-
 .../expected/xmi/array-self-non-embeddable-l.xml   |   24 +-
 .../CasSerialization/expected/xmi/emptyCAS.xml     |    2 +-
 .../expected/xmi/indexedAndRef.xml                 |   12 +-
 .../expected/xmi/indexedSingleList.xml             |   12 +-
 .../expected/xmi/indexedSingleListStatic.xml       |   12 +-
 .../expected/xmi/multipleViews.xml                 |   35 +-
 .../expected/xmi/nameSpaceCollision.xml            |    2 +-
 .../expected/xmi/nameSpaceCollision2.xml           |    2 +-
 .../expected/xmi/nameSpaceCollision2Omits.xml      |    2 +-
 .../expected/xmi/nameSpaceCollision2pp.xml         |   16 +-
 .../expected/xmi/nameSpaceCollision2ppOmits.xml    |   16 +-
 .../expected/xmi/nameSpaceCollisionOmits.xml       |    2 +-
 .../expected/xmi/nameSpaceCollsionFiltered.xml     |    2 +-
 .../expected/xmi/nameSpaceNoCollsionFiltered.xml   |    2 +-
 .../expected/xmi/topAndTokenOnly.xml               |    2 +-
 .../expected/xmi/topAndTokenOnlyNoContext.xml      |    2 +-
 .../xmi/topAndTokenOnlyNoExpandedTypeNames.xml     |    2 +-
 .../expected/xmi/topAndTokenOnlyNoSubtypes.xml     |    2 +-
 .../expected/xmi/topExpandedNamesNoViews.xml       |    2 +-
 .../CasSerialization/expected/xmi/topNoContext.xml |    2 +-
 .../expected/xmi/topNoExpandedTypeNames.xml        |    2 +-
 .../expected/xmi/topWithDefaultViewOmits.xml       |    2 +-
 .../expected/xmi/topWithNamedViewOmits.xml         |    2 +-
 .../CasSerialization/expected/xmi/twoListMerge.xml |   14 +-
 .../expected/xmi/twoListMergeStatic.xml            |   14 +-
 uimaj-parent/pom.xml                               |  160 +-
 uimaj-parent/src/main/groovy/api-report.groovy     |    5 +-
 uimaj-test-util/pom.xml                            |   20 +-
 .../uima/test/junit_extension/FileCompare.java     |   31 +-
 uimaj-tools/pom.xml                                |   19 +-
 .../uima/tools/AnnotationFeaturesViewer.java       |   32 +
 .../apache/uima/tools/AnnotationViewerMain.java    |   40 +-
 .../src/main/java/org/apache/uima/tools/RunAE.java |   51 +-
 .../org/apache/uima/tools/ValidateDescriptor.java  |    3 +-
 .../org/apache/uima/tools/annot_view/Gladis.java   |    1 +
 .../tools/components/InlineXmlCasConsumer.java     |    3 +-
 .../tools/components/XCasWriterCasConsumer.java    |   10 +-
 .../tools/components/XmiWriterCasConsumer.java     |    9 +-
 .../apache/uima/tools/cpm/AnalysisEnginePanel.java |   44 +
 .../org/apache/uima/tools/cpm/ConfigField.java     |   54 +-
 .../org/apache/uima/tools/cpm/ConsumerPanel.java   |   43 +
 .../java/org/apache/uima/tools/cpm/CpmFrame.java   |   31 +
 .../java/org/apache/uima/tools/cpm/CpmPanel.java   |  281 +-
 .../uima/tools/cpm/ElapsedTimeFormatter.java       |   11 +
 .../uima/tools/cpm/JTabbedPaneWithCloseIcons.java  |   52 +
 .../org/apache/uima/tools/cpm/MetaDataPanel.java   |   43 +-
 .../uima/tools/cpm/PerformanceReportDialog.java    |   23 +
 .../apache/uima/tools/cpm/TabClosedListener.java   |   15 +-
 .../cvd/AnnotationDisplayCustomizationFrame.java   |  118 +
 .../apache/uima/tools/cvd/AnnotationExtent.java    |   28 +-
 .../java/org/apache/uima/tools/cvd/ArrayNode.java  |   29 +
 .../org/apache/uima/tools/cvd/AutoFoldingMenu.java |   19 +
 .../main/java/org/apache/uima/tools/cvd/CVD.java   |   43 +
 .../java/org/apache/uima/tools/cvd/ColorIcon.java  |   19 +
 .../java/org/apache/uima/tools/cvd/FSNode.java     |  427 +-
 .../org/apache/uima/tools/cvd/FSTreeModel.java     |  213 +-
 .../java/org/apache/uima/tools/cvd/FSTreeNode.java |   28 +-
 .../org/apache/uima/tools/cvd/IndexTreeNode.java   |   23 +
 .../org/apache/uima/tools/cvd/LogFileViewer.java   |   38 +-
 .../java/org/apache/uima/tools/cvd/MainFrame.java  |  686 +-
 .../org/apache/uima/tools/cvd/MarkupExtent.java    |   25 +
 .../uima/tools/cvd/MultiAnnotViewerFrame.java      |   45 +
 .../org/apache/uima/tools/cvd/MultiMarkup.java     |   45 +-
 .../org/apache/uima/tools/cvd/RecentFilesList.java |   10 +-
 .../uima/tools/cvd/StringFsPopupEventAdapter.java  |   27 +
 .../org/apache/uima/tools/cvd/TypeTreeNode.java    |   15 +
 .../uima/tools/cvd/control/AboutHandler.java       |   15 +-
 .../uima/tools/cvd/control/AboutUimaHandler.java   |   14 +
 .../uima/tools/cvd/control/AddLanguageHandler.java |   14 +
 .../cvd/control/AnnotatorOpenEventHandler.java     |   14 +
 .../cvd/control/AnnotatorRerunEventHandler.java    |   14 +
 .../cvd/control/AnnotatorRunCPCEventHandler.java   |   14 +
 .../cvd/control/AnnotatorRunOnCasEventHandler.java |   14 +
 .../uima/tools/cvd/control/CaretChangeHandler.java |   11 +
 .../cvd/control/CloseAnnotationViewHandler.java    |   11 +
 .../tools/cvd/control/CloseLogViewHandler.java     |   14 +
 .../tools/cvd/control/CloseTypeSystemHandler.java  |   14 +
 .../tools/cvd/control/ColorPrefsOpenHandler.java   |   14 +
 .../tools/cvd/control/ColorPrefsSaveHandler.java   |   14 +
 .../tools/cvd/control/FSTreeSelectionListener.java |   13 +
 .../tools/cvd/control/FileOpenEventHandler.java    |   14 +
 .../tools/cvd/control/FileSaveAsEventHandler.java  |   14 +
 .../tools/cvd/control/FileSaveEventHandler.java    |   14 +
 .../uima/tools/cvd/control/FocusFSAction.java      |   12 +
 .../uima/tools/cvd/control/FocusIRAction.java      |   12 +
 .../uima/tools/cvd/control/FocusTextAction.java    |   12 +
 .../apache/uima/tools/cvd/control/HelpHandler.java |   14 +
 .../uima/tools/cvd/control/IndexPopupListener.java |   29 +
 .../cvd/control/IndexTreeSelectionListener.java    |   13 +
 .../control/LoadRecentDescFileEventHandler.java    |   17 +
 .../control/LoadRecentTextFileEventHandler.java    |   17 +
 .../uima/tools/cvd/control/MainFrameClosing.java   |   16 +
 .../uima/tools/cvd/control/ManualHandler.java      |   18 +
 .../tools/cvd/control/NewTextEventHandler.java     |   11 +
 .../uima/tools/cvd/control/PopupHandler.java       |   13 +
 .../uima/tools/cvd/control/PopupListener.java      |   22 +
 .../tools/cvd/control/RemoveLanguageHandler.java   |   14 +
 .../cvd/control/RestoreLangDefaultsHandler.java    |   14 +
 .../uima/tools/cvd/control/SetCodePageHandler.java |   14 +
 .../uima/tools/cvd/control/SetDataPathHandler.java |   14 +
 .../uima/tools/cvd/control/SetLanguageHandler.java |   14 +
 .../tools/cvd/control/SetLogConfigHandler.java     |   11 +
 .../cvd/control/ShowAnnotatedTextHandler.java      |   11 +
 .../control/ShowAnnotationCustomizerHandler.java   |   14 +
 .../tools/cvd/control/ShowTypesystemHandler.java   |   13 +
 .../tools/cvd/control/SofaSelectionListener.java   |   22 +
 .../uima/tools/cvd/control/SystemExitHandler.java  |   14 +
 .../tools/cvd/control/TextChangedListener.java     |   18 +
 .../tools/cvd/control/TextContextMenuAction.java   |   12 +
 .../uima/tools/cvd/control/TextFocusHandler.java   |   12 +
 .../uima/tools/cvd/control/TreeFocusHandler.java   |   18 +
 .../control/TypeSystemFileOpenEventHandler.java    |   11 +
 .../org/apache/uima/tools/cvd/control/UndoMgr.java |   20 +
 .../cvd/control/XCASFileOpenEventHandler.java      |   11 +
 .../uima/tools/cvd/control/XCASSaveHandler.java    |   14 +
 .../uima/tools/cvd/control/XCASSaveTSHandler.java  |   14 +
 .../tools/cvd/control/XmiCasFileOpenHandler.java   |   11 +
 .../uima/tools/cvd/control/XmiCasSaveHandler.java  |   13 +-
 .../uima/tools/cvd/tsview/FeatureTableModel.java   |   33 +
 .../apache/uima/tools/cvd/tsview/MainFrame.java    |   77 +
 .../tools/docanalyzer/AnnotationViewerDialog.java  |  115 +-
 .../uima/tools/docanalyzer/DocumentAnalyzer.java   |  182 +-
 .../uima/tools/docanalyzer/FileSelector.java       |   85 +
 .../tools/docanalyzer/FileSelectorListener.java    |   20 +
 .../uima/tools/docanalyzer/PrefsMediator.java      |  127 +-
 .../uima/tools/docanalyzer/TfDocumentListener.java |   12 +
 .../tools/docanalyzer/TfFileSelectorListener.java  |   10 +
 .../uima/tools/docanalyzer/TfFocusListener.java    |   11 +
 .../java/org/apache/uima/tools/jcasgen/GUI.java    |   87 +-
 .../apache/uima/tools/jcasgen/GuiErrorImpl.java    |    8 +
 .../uima/tools/jcasgen/GuiProgressMonitor.java     |   40 +
 .../java/org/apache/uima/tools/jcasgen/IError.java |   15 +
 .../java/org/apache/uima/tools/jcasgen/IMerge.java |   17 +
 .../uima/tools/jcasgen/IProgressMonitor.java       |   24 +
 .../uima/tools/jcasgen/JCasTypeTemplate.java       |  313 +-
 .../uima/tools/jcasgen/JCas_TypeTemplate.java      |  224 -
 .../java/org/apache/uima/tools/jcasgen/Jg.java     |  701 +-
 .../uima/tools/jcasgen/LogThrowErrorImpl.java      |    7 +
 .../java/org/apache/uima/tools/jcasgen/Prefs.java  |   16 +
 .../org/apache/uima/tools/jcasgen/TypeInfo.java    |   23 +
 .../tools/jcasgen/UimaLoggerProgressMonitor.java   |   40 +
 .../java/org/apache/uima/tools/jcasgen/Waiter.java |   13 +
 .../org/apache/uima/tools/jcasgen/package.html     |   10 +-
 .../uima/tools/migration/IbmUimaToApacheUima.java  |  399 --
 .../uima/tools/pear/install/InstallPear.java       |   66 +-
 .../uima/tools/pear/install/InstallPearCli.java    |   15 +
 .../apache/uima/tools/pear/merger/PMUimaAgent.java |   23 +-
 .../apache/uima/tools/stylemap/AnTreeListener.java |   17 +-
 .../tools/stylemap/AnnotationFeaturesViewer.java   |   46 +
 .../apache/uima/tools/stylemap/ColorEditor.java    |   25 +
 .../apache/uima/tools/stylemap/ColorParser.java    |   42 +-
 .../apache/uima/tools/stylemap/ColorRenderer.java  |   16 +
 .../uima/tools/stylemap/LabelCellEditor.java       |   13 +
 .../apache/uima/tools/stylemap/MyCellRenderer.java |   19 +
 .../apache/uima/tools/stylemap/StyleConstants.java |   13 +
 .../apache/uima/tools/stylemap/StyleMapEditor.java |   85 +-
 .../apache/uima/tools/stylemap/StyleMapEntry.java  |   64 +-
 .../apache/uima/tools/stylemap/StyleMapTable.java  |   16 +
 .../uima/tools/stylemap/StyleMapTableModel.java    |   70 +
 .../uima/tools/stylemap/StyleMapXmlParser.java     |   25 +
 .../uima/tools/stylemap/TableDropAdapter.java      |   17 +
 .../uima/tools/stylemap/TableGUIMediator.java      |   44 +
 .../tools/stylemap/TableSelectionListener.java     |   22 +
 .../apache/uima/tools/util/gui/AboutDialog.java    |   11 +
 .../org/apache/uima/tools/util/gui/Caption.java    |    8 +
 .../tools/util/gui/FileChooserBugWorkarounds.java  |    2 +
 .../apache/uima/tools/util/gui/FileSelector.java   |   54 +
 .../uima/tools/util/gui/FileSelectorListener.java  |   20 +
 .../org/apache/uima/tools/util/gui/FormPanel.java  |   37 +
 .../apache/uima/tools/util/gui/ImageButton.java    |   15 +
 .../apache/uima/tools/util/gui/IntegerField.java   |   20 +-
 .../apache/uima/tools/util/gui/ListSelector.java   |   48 +-
 .../apache/uima/tools/util/gui/SliderField.java    |   44 +-
 .../uima/tools/util/gui/SpringUtilities.java       |   18 +-
 .../tools/util/gui/TransportControlListener.java   |   24 +
 .../uima/tools/util/gui/TransportControlPanel.java |   72 +
 .../apache/uima/tools/util/gui/XMLFileFilter.java  |   17 +
 .../util/htmlview/AnnotationViewGenerator.java     |   29 +-
 .../uima/tools/viewer/CasAnnotationViewer.java     |  442 +-
 .../tools/viewer/CasAnnotationViewerApplet.java    |   13 +-
 .../apache/uima/tools/viewer/CasTreeViewer.java    |   38 +-
 .../uima/tools/viewer/CasTreeViewerApplet.java     |   12 +-
 .../apache/uima/tools/viewer/EntityResolver.java   |    1 +
 .../includedTemplates/Annotation_Methods.javajet   |   31 -
 .../includedTemplates/FeatOk_Testing.javajet       |   23 -
 .../javajet/jcasgen/templates/JCasType.javajet     |  130 +-
 .../javajet/jcasgen/templates/JCas_Type.javajet    |  152 -
 .../uima/tools/viewer/CasAnnotationViewerTest.java |   22 +-
 .../pearMergerTests/uima.example.DateTime.pear     |  Bin 38739 -> 23089 bytes
 .../pearMergerTests/uima.example.RoomNumber.pear   |  Bin 35950 -> 10437 bytes
 uimaj-v3migration-jcas/pom.xml                     |   97 +
 .../apache/uima/migratev3/jcas/MigrateJCas.java    | 3560 +++++++++
 ... V3 migrate JCas from classes roots test.launch |   32 +
 ... V3 migrate JCas from sources roots test.launch |   32 +
 .../v2_jcas_compiled/example/PersonTitle.class     |  Bin 0 -> 2220 bytes
 .../example/PersonTitle_Type$1.class               |  Bin 0 -> 1442 bytes
 .../example/PersonTitle_Type.class                 |  Bin 0 -> 2867 bytes
 .../uima/examples/SourceDocumentInformation.class  |  Bin 0 -> 3844 bytes
 .../uima/examples/SourceDocumentInformation.xml    |   58 +
 .../SourceDocumentInformation_Type$1.class         |  Bin 0 -> 1501 bytes
 .../examples/SourceDocumentInformation_Type.class  |  Bin 0 -> 4571 bytes
 ...vancedFixedFlowController$FixedFlowObject.class |  Bin 0 -> 4611 bytes
 .../flow/AdvancedFixedFlowController.class         |  Bin 0 -> 4640 bytes
 .../WhiteboardFlowController$WhiteboardFlow.class  |  Bin 0 -> 4438 bytes
 .../examples/flow/WhiteboardFlowController.class   |  Bin 0 -> 1800 bytes
 .../flow/WhiteboardFlowController2$1.class         |  Bin 0 -> 283 bytes
 .../WhiteboardFlowController2$ComponentInfo.class  |  Bin 0 -> 728 bytes
 .../WhiteboardFlowController2$WhiteboardFlow.class |  Bin 0 -> 3557 bytes
 .../examples/flow/WhiteboardFlowController2.class  |  Bin 0 -> 4653 bytes
 .../apache/uima/examples/tokenizer/Sentence.class  |  Bin 0 -> 1143 bytes
 .../uima/examples/tokenizer/Sentence_Type$1.class  |  Bin 0 -> 1607 bytes
 .../uima/examples/tokenizer/Sentence_Type.class    |  Bin 0 -> 2079 bytes
 .../SimpleTokenAndSentenceAnnotator$1.class        |  Bin 0 -> 933 bytes
 .../SimpleTokenAndSentenceAnnotator$2.class        |  Bin 0 -> 930 bytes
 .../SimpleTokenAndSentenceAnnotator$Maker.class    |  Bin 0 -> 607 bytes
 .../SimpleTokenAndSentenceAnnotator.class          |  Bin 0 -> 2673 bytes
 .../org/apache/uima/examples/tokenizer/Token.class |  Bin 0 -> 1134 bytes
 .../uima/examples/tokenizer/Token_Type$1.class     |  Bin 0 -> 1583 bytes
 .../uima/examples/tokenizer/Token_Type.class       |  Bin 0 -> 2055 bytes
 .../org/apache/uima/jcas/cas/AnnotationBase.class  |  Bin 0 -> 2241 bytes
 .../apache/uima/jcas/cas/AnnotationBase_Type.class |  Bin 0 -> 2489 bytes
 .../org/apache/uima/jcas/cas/TOP.class             |  Bin 0 -> 3864 bytes
 .../org/apache/uima/jcas/cas/TOP_Type.class        |  Bin 0 -> 3193 bytes
 .../org/apache/uima/tutorial/DateAnnot.class       |  Bin 0 -> 1285 bytes
 .../apache/uima/tutorial/DateAnnot_Type$1.class    |  Bin 0 -> 1545 bytes
 .../org/apache/uima/tutorial/DateAnnot_Type.class  |  Bin 0 -> 1792 bytes
 .../org/apache/uima/tutorial/DateTimeAnnot.class   |  Bin 0 -> 2377 bytes
 .../uima/tutorial/DateTimeAnnot_Type$1.class       |  Bin 0 -> 1577 bytes
 .../apache/uima/tutorial/DateTimeAnnot_Type.class  |  Bin 0 -> 3057 bytes
 .../org/apache/uima/tutorial/Meeting.class         |  Bin 0 -> 4951 bytes
 .../org/apache/uima/tutorial/Meeting_Type$1.class  |  Bin 0 -> 1529 bytes
 .../org/apache/uima/tutorial/Meeting_Type.class    |  Bin 0 -> 4361 bytes
 .../org/apache/uima/tutorial/RoomNumber.class      |  Bin 0 -> 2311 bytes
 .../apache/uima/tutorial/RoomNumber_Type$1.class   |  Bin 0 -> 1553 bytes
 .../org/apache/uima/tutorial/RoomNumber_Type.class |  Bin 0 -> 2990 bytes
 .../org/apache/uima/tutorial/SentenceAnnot.class   |  Bin 0 -> 1295 bytes
 .../uima/tutorial/SentenceAnnot_Type$1.class       |  Bin 0 -> 1577 bytes
 .../apache/uima/tutorial/SentenceAnnot_Type.class  |  Bin 0 -> 1822 bytes
 .../org/apache/uima/tutorial/TimeAnnot.class       |  Bin 0 -> 1285 bytes
 .../apache/uima/tutorial/TimeAnnot_Type$1.class    |  Bin 0 -> 1545 bytes
 .../org/apache/uima/tutorial/TimeAnnot_Type.class  |  Bin 0 -> 1792 bytes
 .../org/apache/uima/tutorial/UimaAcronym.class     |  Bin 0 -> 2543 bytes
 .../apache/uima/tutorial/UimaAcronym_Type$1.class  |  Bin 0 -> 1561 bytes
 .../apache/uima/tutorial/UimaAcronym_Type.class    |  Bin 0 -> 3026 bytes
 .../org/apache/uima/tutorial/UimaMeeting.class     |  Bin 0 -> 1783 bytes
 .../apache/uima/tutorial/UimaMeeting_Type$1.class  |  Bin 0 -> 1561 bytes
 .../apache/uima/tutorial/UimaMeeting_Type.class    |  Bin 0 -> 1802 bytes
 .../org/apache/uima/tutorial/WordAnnot.class       |  Bin 0 -> 1283 bytes
 .../apache/uima/tutorial/WordAnnot_Type$1.class    |  Bin 0 -> 1545 bytes
 .../org/apache/uima/tutorial/WordAnnot_Type.class  |  Bin 0 -> 1790 bytes
 .../test/v2_jcas_sources}/example/PersonTitle.java |    0
 .../v2_jcas_sources}/example/PersonTitle_Type.java |    0
 .../apache/uima/examples/tokenizer/Sentence.java   |    0
 .../uima/examples/tokenizer/Sentence_Type.java     |    0
 .../tokenizer/SimpleTokenAndSentenceAnnotator.java |    0
 .../org/apache/uima/examples/tokenizer/Token.java  |    0
 .../apache/uima/examples/tokenizer/Token_Type.java |    0
 .../org/apache/uima/tutorial/DateAnnot.java        |   89 +
 .../org/apache/uima/tutorial/DateAnnot_Type.java   |    0
 .../org/apache/uima/tutorial/DateTimeAnnot.java    |  118 +
 .../apache/uima/tutorial/DateTimeAnnot_Type.java   |    0
 .../org/apache/uima/tutorial/Meeting.java          |  213 +
 .../org/apache/uima/tutorial/Meeting_Type.java     |    0
 .../org/apache/uima/tutorial/RoomNumber.java       |  115 +
 .../org/apache/uima/tutorial/RoomNumber_Type.java  |    0
 .../org/apache/uima/tutorial/SentenceAnnot.java    |   90 +
 .../apache/uima/tutorial/SentenceAnnot_Type.java   |    0
 .../org/apache/uima/tutorial/TimeAnnot.java        |   89 +
 .../org/apache/uima/tutorial/TimeAnnot_Type.java   |    0
 .../org/apache/uima/tutorial/UimaAcronym.java      |  122 +
 .../org/apache/uima/tutorial/UimaAcronym_Type.java |    0
 .../org/apache/uima/tutorial/UimaMeeting.java      |   94 +
 .../org/apache/uima/tutorial/UimaMeeting_Type.java |    0
 .../org/apache/uima/tutorial/WordAnnot.java        |   90 +
 .../org/apache/uima/tutorial/WordAnnot_Type.java   |    0
 unused-saved/README.txt                            |    3 +
 .../apache/uima/cas/impl/AnnotationIndexImpl.java  |  221 +
 .../cas/impl/FSIteratorWrapperDoubleCheck.java     |  156 +
 .../apache/uima/cas/impl/FSListIteratorImpl.java   |  161 +
 .../src/org/apache/uima/cas/impl/FSRBTIndex.java   |  151 +
 .../org/apache/uima/cas/impl/FeatureArrayImpl.java |   59 +
 .../apache/uima/cas/impl/FeatureGetter_int.java    |   26 +
 .../apache/uima/cas/impl/FeatureGetter_ref.java    |   26 +
 .../apache/uima/cas/impl/FeatureSetter_int.java    |   25 +
 .../apache/uima/cas/impl/FeatureSetter_ref.java    |   25 +
 .../uima/cas/impl/FeatureStructureClassGen.java    |  489 ++
 .../src/org/apache/uima/cas/impl/FsIndex_aggr.java |  233 +
 .../uima/cas/impl/FsIterator_set_sorted.java       |  264 +
 .../impl/FsIterator_set_sorted_navset_version.java |  270 +
 .../apache/uima/cas/impl/FsIterator_subtypes.java  |   58 +
 .../cas/impl/FsIterator_subtypes_list_unused.java  |   34 +
 .../uima/cas/impl/JCasCoverClassFactoryTest.java   |   61 +
 .../src/org/apache/uima/cas/impl/TypeImplList.java |   36 +
 .../src/org/apache/uima/cas/impl/TypeImplMap.java  |   45 +
 .../impl/XXXdont_use_JCasCoverClassFactory.java    |  505 ++
 .../impl/JCasCoverClassFactoryTest.java            |   64 +
 .../util/ComparableIntPointerIterator.java         |   47 +
 .../apache/uima/internal/util/Int2IntHashMap.java  |  517 ++
 .../uima/internal/util/Int2IntHashMapTest.java     |   87 +
 .../apache/uima/internal/util/Int2IntPerfTest.java |  153 +
 .../internal/util/UIMATypeSystemClassLoader.java   |  154 +
 .../util/UIMATypeSystemClassLoaderInjector.java    |  120 +
 .../org/apache/uima/jcas/cas/JavaObjectArray.java  |  193 +
 .../src/org/apache/uima/jcas/impl/CASMetadata.java |   41 +
 .../uima/jcas/impl/JCasCoverClassFactory.java      |  352 +
 .../uima/jcas/impl/JCasCoverClassFactoryTest.java  |   61 +
 .../src/org/apache/uima/jcas/impl/JCasHashMap.java |  444 ++
 .../uima/jcas/impl/JCasHashMapCompareTest.java     |  198 +
 .../apache/uima/jcas/impl/JCasHashMapSubMap.java   |    0
 .../org/apache/uima/jcas/impl/JCasHashMapTest.java |  468 ++
 .../apache/uima/jcasgen/JCasClassDefinition.java   |   67 +
 .../uima/jcasgen/impl/JCasClassConversion.java     |  254 +
 .../src/org/apache/uima/jcasgen/impl/package.html  |   36 +
 .../src/org/apache/uima/jcasgen/package.html       |   38 +
 .../uima/tools/jcas/internal/AnalyzeContent.java   |  345 +
 .../uima/tools/jcasgen/DecompiledFilter.java       |  156 +
 .../src/study/asm/decompiled/AnnotationDumpV3.java |  284 +
 1535 files changed, 110173 insertions(+), 55025 deletions(-)