You are viewing a plain text version of this content. The canonical link for it is here.
Posted to user@uima.apache.org by "Hamed, Ahmed A." <ah...@gmail.com> on 2009/04/06 02:05:33 UTC
Fwd: UIMA wrapper for MetaMap
Apologies for cross-posting!
I sent the note below to the bionlp list and I haven't received a response
yet. Please let me know if you have any answers for me.
Best wishes,
Ahmed
---------- Forwarded message ----------
From: Hamed, Ahmed A. <ah...@indiana.edu>
Date: Fri, Apr 3, 2009 at 1:55 AM
Subject: UIMA wrapper for MetaMap
To: Natural language processing for biology <bi...@lists.ccs.neu.edu>
Hello friends,I am wondering if anyone has implemented MetaMap UIMA wrapper?
I have been looking around but it doesn't seem that this effort has started.
I would be willing to implement it if those with experience in UIMA wrappers
could guide me. I am well experienced with UIMA but I could still use help
with wrappers.
Thanks in advance,
Ahmed
--
Ahmed Abdeen Hamed
Scientific Informatics Project Leader
University of Vermont, Burlington, VT
Marine Biological Laboratory Woods Hole, MA
--
Ph.D. student, Complex Systems
School of Informatics, Indiana University
--
Ahmed Abdeen Hamed
Scientific Informatics Project Leader
University of Vermont, Burlington, VT
Marine Biological Laboratory Woods Hole, MA
--
Ph.D. student, Complex Systems
School of Informatics, Indiana University
Re: Fwd: UIMA wrapper for MetaMap
Posted by "Hamed, Ahmed A." <ah...@gmail.com>.
Thanks you, Thilo! I really appreciate it. I will let you know when I have
questions.
Sincerely,
Ahmed
On Thu, Apr 9, 2009 at 10:54 AM, Thilo Goetz <tw...@gmx.de> wrote:
> Hi Ahmed,
>
> I had a look at MetaMap, but it doesn't seem to be
> publicly available, so I can't offer any advice.
> However, please come back to this list if you encounter
> specific issues. We'll help as best as we can.
>
> --Thilo
>
> Hamed, Ahmed A. wrote:
> > Apologies for cross-posting!
> >
> > I sent the note below to the bionlp list and I haven't received a
> response
> > yet. Please let me know if you have any answers for me.
> >
> > Best wishes,
> > Ahmed
> >
> > ---------- Forwarded message ----------
> > From: Hamed, Ahmed A. <ah...@indiana.edu>
> > Date: Fri, Apr 3, 2009 at 1:55 AM
> > Subject: UIMA wrapper for MetaMap
> > To: Natural language processing for biology <bi...@lists.ccs.neu.edu>
> >
> >
> > Hello friends,I am wondering if anyone has implemented MetaMap UIMA
> wrapper?
> > I have been looking around but it doesn't seem that this effort has
> started.
> > I would be willing to implement it if those with experience in UIMA
> wrappers
> > could guide me. I am well experienced with UIMA but I could still use
> help
> > with wrappers.
> > Thanks in advance,
> > Ahmed
> >
>
--
Ahmed Abdeen Hamed
Scientific Informatics Project Leader
University of Vermont, Burlington, VT
Marine Biological Laboratory Woods Hole, MA
--
Ph.D. student, Complex Systems
School of Informatics, Indiana University
Re: Fwd: UIMA wrapper for MetaMap
Posted by Thilo Goetz <tw...@gmx.de>.
Hi Ahmed,
I had a look at MetaMap, but it doesn't seem to be
publicly available, so I can't offer any advice.
However, please come back to this list if you encounter
specific issues. We'll help as best as we can.
--Thilo
Hamed, Ahmed A. wrote:
> Apologies for cross-posting!
>
> I sent the note below to the bionlp list and I haven't received a response
> yet. Please let me know if you have any answers for me.
>
> Best wishes,
> Ahmed
>
> ---------- Forwarded message ----------
> From: Hamed, Ahmed A. <ah...@indiana.edu>
> Date: Fri, Apr 3, 2009 at 1:55 AM
> Subject: UIMA wrapper for MetaMap
> To: Natural language processing for biology <bi...@lists.ccs.neu.edu>
>
>
> Hello friends,I am wondering if anyone has implemented MetaMap UIMA wrapper?
> I have been looking around but it doesn't seem that this effort has started.
> I would be willing to implement it if those with experience in UIMA wrappers
> could guide me. I am well experienced with UIMA but I could still use help
> with wrappers.
> Thanks in advance,
> Ahmed
>
Re: Fwd: UIMA wrapper for MetaMap
Posted by "Hamed, Ahmed A." <ah...@gmail.com>.
Dear Kai,
Thank you for your response. I would be happy to share ideas and pair up
with you to work on the wrapper. It would be good, however, if we could get
some help from people who implemented wrappers especially those who
developed bionlp tools. So, perhaps we should give the rest of list the
chance to read this inquiry to give us the help we need to get started. In
the mean time, we can do our research individually. By Friday if I didn't
hear from anyone, I will write to you about pairing up plans and all.
Thanks again for your interest in this. Let's hope someone gets back with
both of us soon :)
Ahmed
On Sun, Apr 5, 2009 at 9:08 PM, Kai Schlamp <sc...@gmx.de> wrote:
> Hello Ahmed.
>
> I am also very interested in a MetaMap (resp. MMTX) UIMA wrapper. It is
> also planned to implement it as part of the project I am currently working
> on.
> I am quite new in programming for the UIMA framework (I am more in Eclipse
> RCP development at the moment), but already read a lot of stuff and tried
> some things.
> I would be happy to share ideas and probably work together on that wrapper.
> I also forwarded this message to your E-Mail box.
>
> Cheers,
> Kai
>
>
> Hamed, Ahmed A. schrieb:
>
> Apologies for cross-posting!
>>
>> I sent the note below to the bionlp list and I haven't received a response
>> yet. Please let me know if you have any answers for me.
>>
>> Best wishes,
>> Ahmed
>>
>> ---------- Forwarded message ----------
>> From: Hamed, Ahmed A. <ah...@indiana.edu>
>> Date: Fri, Apr 3, 2009 at 1:55 AM
>> Subject: UIMA wrapper for MetaMap
>> To: Natural language processing for biology <bi...@lists.ccs.neu.edu>
>>
>>
>> Hello friends,I am wondering if anyone has implemented MetaMap UIMA
>> wrapper?
>> I have been looking around but it doesn't seem that this effort has
>> started.
>> I would be willing to implement it if those with experience in UIMA
>> wrappers
>> could guide me. I am well experienced with UIMA but I could still use help
>> with wrappers.
>> Thanks in advance,
>> Ahmed
>>
>>
>
--
Ahmed Abdeen Hamed
Scientific Informatics Project Leader
University of Vermont, Burlington, VT
Marine Biological Laboratory Woods Hole, MA
--
Ph.D. student, Complex Systems
School of Informatics, Indiana University
Re: Fwd: UIMA wrapper for MetaMap
Posted by Kai Schlamp <sc...@gmx.de>.
Hello Ahmed.
I am also very interested in a MetaMap (resp. MMTX) UIMA wrapper. It is
also planned to implement it as part of the project I am currently
working on.
I am quite new in programming for the UIMA framework (I am more in
Eclipse RCP development at the moment), but already read a lot of stuff
and tried some things.
I would be happy to share ideas and probably work together on that wrapper.
I also forwarded this message to your E-Mail box.
Cheers,
Kai
Hamed, Ahmed A. schrieb:
> Apologies for cross-posting!
>
> I sent the note below to the bionlp list and I haven't received a response
> yet. Please let me know if you have any answers for me.
>
> Best wishes,
> Ahmed
>
> ---------- Forwarded message ----------
> From: Hamed, Ahmed A. <ah...@indiana.edu>
> Date: Fri, Apr 3, 2009 at 1:55 AM
> Subject: UIMA wrapper for MetaMap
> To: Natural language processing for biology <bi...@lists.ccs.neu.edu>
>
>
> Hello friends,I am wondering if anyone has implemented MetaMap UIMA wrapper?
> I have been looking around but it doesn't seem that this effort has started.
> I would be willing to implement it if those with experience in UIMA wrappers
> could guide me. I am well experienced with UIMA but I could still use help
> with wrappers.
> Thanks in advance,
> Ahmed
>