[jira] [Created] (YARN-5842) spark job getting failed with memory not avail

["Mohamed Kajamoideen (JIRA)" <ji...@apache.org>]

Mohamed Kajamoideen created YARN-5842:
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             Summary: spark job getting failed with memory not avail
                 Key: YARN-5842
                 URL: https://issues.apache.org/jira/browse/YARN-5842
             Project: Hadoop YARN
          Issue Type: Task
          Components: applications
         Environment: spark running in emr 4.3 with hadoop 2.7 and spark 1.6.0
            Reporter: Mohamed Kajamoideen


> config <- spark_config()
> config$`sparklyr.shell.driver-memory` <- "4G"
> config$`sparklyr.shell.executor-memory` <- "4G"
> sc <- spark_connect(master = "yarn-client", config = config) 

Error: org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 27.0 failed 4 times, most recent failure: Lost task 0.3 in stage 27.0 (TID 1941, ip- .ec2.internal): org.apache.spark.SparkException: Values to assemble cannot be null.
	at org.apache.spark.ml.feature.VectorAssembler$$anonfun$assemble$1.apply(VectorAssembler.scala:154)
	at org.apache.spark.ml.feature.VectorAssembler$$anonfun$assemble$1.apply(VectorAssembler.scala:137)
	at scala.collection.IndexedSeqOptimized$class.foreach(IndexedSeqOptimized.scala:33)
	at scala.collection.mutable.WrappedArray.foreach(WrappedArray.scala:34)
	at org.apache.spark.ml.feature.VectorAssembler$.assemble(VectorAssembler.scala:137)
	at org.apache.spark.ml.feature.VectorAssembler$$anonfun$3.apply(VectorAssembler.scala:95)
	at org.apache.spark.ml.feature.VectorAssembler$$anonfun$3.apply(VectorAssembler.scala:94)
	at org.apache.spark.sql.catalyst.expressions.GeneratedClass$SpecificUnsafeProjection.apply(Unknown Sou



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