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Posted to notifications@ctakes.apache.org by "James Joseph Masanz (JIRA)" <ji...@apache.org> on 2013/02/08 21:19:17 UTC
[jira] [Created] (CTAKES-156) java.io.FileNotFoundException:
lookup/rxnorm_index when using
DictionaryLookupAnnotator_sideEffectUMLS.xml
James Joseph Masanz created CTAKES-156:
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Summary: java.io.FileNotFoundException: lookup/rxnorm_index when using DictionaryLookupAnnotator_sideEffectUMLS.xml
Key: CTAKES-156
URL: https://issues.apache.org/jira/browse/CTAKES-156
Project: cTAKES
Issue Type: Bug
Components: ctakes-side-effect
Affects Versions: 3.0-incubating, 3.1-incubating
Reporter: James Joseph Masanz
Fix For: 3.1-incubating
Using RC7 of 3.0.0-incubating:
2/8/13 2:10:15 PM - 10: org.apache.uima.tools.cvd.MainFrame.handleException(527): SEVERE: Exception occurred
org.apache.uima.resource.ResourceInitializationException
at org.apache.ctakes.core.resource.LuceneIndexReaderResourceImpl.load(LuceneIndexReaderResourceImpl.java:79)
Caused by: java.io.FileNotFoundException: lookup/rxnorm_index
at org.apache.ctakes.core.resource.FileLocator.locateExplicitly(FileLocator.java:69)
at org.apache.ctakes.core.resource.FileLocator.locateFile(FileLocator.java:44)
at org.apache.ctakes.core.resource.LuceneIndexReaderResourceImpl.load(LuceneIndexReaderResourceImpl.java:57)
... 59 more
DictionaryLookupAnnotator_sideEffectUMLS.xml contains this line
<string>lookup/rxnorm_index</string>
whereas DictionaryLookupAnnotator_sideEffect.xml contains this line
<string>org/apache/ctakes/dictionary/lookup/drug_index</string>
Personally I don't think this is severe enough to hold up the release of 3.0.0, but if we have to create a new RC for some other reason, should consider adding it to the next RC
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