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Posted to issues@flink.apache.org by "Flavio Pompermaier (JIRA)" <ji...@apache.org> on 2016/09/30 09:27:21 UTC
[jira] [Created] (FLINK-4719) KryoSerializer random exception
Flavio Pompermaier created FLINK-4719:
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Summary: KryoSerializer random exception
Key: FLINK-4719
URL: https://issues.apache.org/jira/browse/FLINK-4719
Project: Flink
Issue Type: Bug
Components: Core
Affects Versions: 1.1.1
Reporter: Flavio Pompermaier
There's a random exception that involves somehow the KryoSerializer when using POJOs in Flink jobs reading large volumes of data.
It is usually thrown in several places, e.g. (the Exceptions reported here can refer to previous versions of Flink...):
{code}
java.lang.Exception: The data preparation for task 'CHAIN GroupReduce (GroupReduce at createResult(IndexMappingExecutor.java:42)) -> Map (Map at main(Jsonizer.java:128))' , caused an error: Error obtaining the sorted input: Thread 'SortMerger spilling thread' terminated due to an exception: Unable to find class: java.ttil.HashSet
at org.apache.flink.runtime.operators.BatchTask.run(BatchTask.java:456)
at org.apache.flink.runtime.operators.BatchTask.invoke(BatchTask.java:345)
at org.apache.flink.runtime.taskmanager.Task.run(Task.java:559)
at java.lang.Thread.run(Thread.java:745)
Caused by: java.lang.RuntimeException: Error obtaining the sorted input: Thread 'SortMerger spilling thread' terminated due to an exception: Unable to find class: java.ttil.HashSet
at org.apache.flink.runtime.operators.sort.UnilateralSortMerger.getIterator(UnilateralSortMerger.java:619)
at org.apache.flink.runtime.operators.BatchTask.getInput(BatchTask.java:1079)
at org.apache.flink.runtime.operators.GroupReduceDriver.prepare(GroupReduceDriver.java:94)
at org.apache.flink.runtime.operators.BatchTask.run(BatchTask.java:450)
... 3 more
Caused by: java.io.IOException: Thread 'SortMerger spilling thread' terminated due to an exception: Unable to find class: java.ttil.HashSet
at org.apache.flink.runtime.operators.sort.UnilateralSortMerger$ThreadBase.run(UnilateralSortMerger.java:800)
Caused by: com.esotericsoftware.kryo.KryoException: Unable to find class: java.ttil.HashSet
at com.esotericsoftware.kryo.util.DefaultClassResolver.readName(DefaultClassResolver.java:138)
at com.esotericsoftware.kryo.util.DefaultClassResolver.readClass(DefaultClassResolver.java:115)
at com.esotericsoftware.kryo.Kryo.readClass(Kryo.java:641)
at com.esotericsoftware.kryo.Kryo.readClassAndObject(Kryo.java:752)
at com.esotericsoftware.kryo.serializers.MapSerializer.read(MapSerializer.java:143)
at com.esotericsoftware.kryo.serializers.MapSerializer.read(MapSerializer.java:21)
at com.esotericsoftware.kryo.Kryo.readClassAndObject(Kryo.java:761)
at org.apache.flink.api.java.typeutils.runtime.kryo.KryoSerializer.deserialize(KryoSerializer.java:228)
at org.apache.flink.api.java.typeutils.runtime.kryo.KryoSerializer.deserialize(KryoSerializer.java:242)
at org.apache.flink.api.java.typeutils.runtime.kryo.KryoSerializer.copy(KryoSerializer.java:252)
at org.apache.flink.api.java.typeutils.runtime.PojoSerializer.copy(PojoSerializer.java:556)
at org.apache.flink.api.java.typeutils.runtime.TupleSerializerBase.copy(TupleSerializerBase.java:75)
at org.apache.flink.runtime.operators.sort.NormalizedKeySorter.writeToOutput(NormalizedKeySorter.java:499)
at org.apache.flink.runtime.operators.sort.UnilateralSortMerger$SpillingThread.go(UnilateralSortMerger.java:1344)
at org.apache.flink.runtime.operators.sort.UnilateralSortMerger$ThreadBase.run(UnilateralSortMerger.java:796)
Caused by: java.lang.ClassNotFoundException: java.ttil.HashSet
at java.net.URLClassLoader.findClass(URLClassLoader.java:381)
at java.lang.ClassLoader.loadClass(ClassLoader.java:424)
at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
at java.lang.Class.forName0(Native Method)
at java.lang.Class.forName(Class.java:348)
at com.esotericsoftware.kryo.util.DefaultClassResolver.readName(DefaultClassResolver.java:136)
{code}
{code}
Caused by: java.io.IOException: Serializer consumed more bytes than the record had. This indicates broken serialization. If you are using custom serialization types (Value or Writable), check their serialization methods. If you are using a Kryo-serialized type, check the corresponding Kryo serializer.
at org.apache.flink.runtime.io.network.api.serialization.SpillingAdaptiveSpanningRecordDeserializer.getNextRecord(SpillingAdaptiveSpanningRecordDeserializer.java:142)
at org.apache.flink.runtime.io.network.api.reader.AbstractRecordReader.getNextRecord(AbstractRecordReader.java:65)
at org.apache.flink.runtime.io.network.api.reader.MutableRecordReader.next(MutableRecordReader.java:34)
at org.apache.flink.runtime.operators.util.ReaderIterator.next(ReaderIterator.java:73)
at org.apache.flink.runtime.operators.FlatMapDriver.run(FlatMapDriver.java:101)
at org.apache.flink.runtime.operators.BatchTask.run(BatchTask.java:480)
at org.apache.flink.runtime.operators.BatchTask.invoke(BatchTask.java:345)
at org.apache.flink.runtime.taskmanager.Task.run(Task.java:559)
at java.lang.Thread.run(Thread.java:745)
Caused by: java.lang.ArrayIndexOutOfBoundsException: -2
at java.util.ArrayList.elementData(ArrayList.java:418)
at java.util.ArrayList.get(ArrayList.java:431)
at com.esotericsoftware.kryo.util.MapReferenceResolver.getReadObject(MapReferenceResolver.java:42)
at com.esotericsoftware.kryo.Kryo.readReferenceOrNull(Kryo.java:805)
at com.esotericsoftware.kryo.Kryo.readClassAndObject(Kryo.java:759)
at org.apache.flink.api.java.typeutils.runtime.kryo.KryoSerializer.deserialize(KryoSerializer.java:228)
at org.apache.flink.api.java.typeutils.runtime.PojoSerializer.deserialize(PojoSerializer.java:431)
at org.apache.flink.api.java.typeutils.runtime.TupleSerializer.deserialize(TupleSerializer.java:135)
at org.apache.flink.api.java.typeutils.runtime.TupleSerializer.deserialize(TupleSerializer.java:30)
at org.apache.flink.runtime.plugable.NonReusingDeserializationDelegate.read(NonReusingDeserializationDelegate.java:55)
at org.apache.flink.runtime.io.network.api.serialization.SpillingAdaptiveSpanningRecordDeserializer.getNextRecord(SpillingAdaptiveSpanningRecordDeserializer.java:124)
{code}
{code}
java.lang.RuntimeException: Cannot instantiate class.
at org.apache.flink.api.java.typeutils.runtime.PojoSerializer.deserialize(PojoSerializer.java:407)
at org.apache.flink.runtime.plugable.NonReusingDeserializationDelegate.read(NonReusingDeserializationDelegate.java:55)
at org.apache.flink.runtime.io.network.api.serialization.SpillingAdaptiveSpanningRecordDeserializer.getNextRecord(SpillingAdaptiveSpanningRecordDeserializer.java:124)
at org.apache.flink.runtime.io.network.api.reader.AbstractRecordReader.getNextRecord(AbstractRecordReader.java:65)
at org.apache.flink.runtime.io.network.api.reader.MutableRecordReader.next(MutableRecordReader.java:34)
at org.apache.flink.runtime.operators.util.ReaderIterator.next(ReaderIterator.java:73)
at org.apache.flink.runtime.operators.FlatMapDriver.run(FlatMapDriver.java:101)
at org.apache.flink.runtime.operators.BatchTask.run(BatchTask.java:480)
at org.apache.flink.runtime.operators.BatchTask.invoke(BatchTask.java:345)
at org.apache.flink.runtime.taskmanager.Task.run(Task.java:559)
at java.lang.Thread.run(Thread.java:745)
Caused by: java.lang.ClassNotFoundException: it.okkam.flink.test.model.pojo.VdhicleEvent
at java.net.URLClassLoader.findClass(URLClassLoader.java:381)
at java.lang.ClassLoader.loadClass(ClassLoader.java:424)
at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
at java.lang.Class.forName0(Native Method)
at java.lang.Class.forName(Class.java:348)
at org.apache.flink.api.java.typeutils.runtime.PojoSerializer.deserialize(PojoSerializer.java:405)
... 10 more
{code}
{code}
com.esotericsoftware.kryo.KryoException: Unable to find class: ^Z^A
at com.esotericsoftware.kryo.util.DefaultClassResolver.readName(DefaultClassResolver.java:138)
at com.esotericsoftware.kryo.util.DefaultClassResolver.readClass(DefaultClassResolver.java:115)
at com.esotericsoftware.kryo.Kryo.readClass(Kryo.java:641)
at com.esotericsoftware.kryo.Kryo.readClassAndObject(Kryo.java:752)
at org.apache.flink.api.java.typeutils.runtime.kryo.KryoSerializer.deserialize(KryoSerializer.java:228)
at org.apache.flink.api.java.typeutils.runtime.PojoSerializer.deserialize(PojoSerializer.java:431)
at org.apache.flink.runtime.plugable.NonReusingDeserializationDelegate.read(NonReusingDeserializationDelegate.java:55)
at org.apache.flink.runtime.io.network.api.serialization.SpillingAdaptiveSpanningRecordDeserializer.getNextRecord(SpillingAdaptiveSpanningRecordDeserializer.java:124)
at org.apache.flink.runtime.io.network.api.reader.AbstractRecordReader.getNextRecord(AbstractRecordReader.java:65)
at org.apache.flink.runtime.io.network.api.reader.MutableRecordReader.next(MutableRecordReader.java:34)
at org.apache.flink.runtime.operators.util.ReaderIterator.next(ReaderIterator.java:73)
at org.apache.flink.runtime.operators.MapDriver.run(MapDriver.java:96)
at org.apache.flink.runtime.operators.BatchTask.run(BatchTask.java:480)
at org.apache.flink.runtime.operators.BatchTask.invoke(BatchTask.java:345)
at org.apache.flink.runtime.taskmanager.Task.run(Task.java:559)
at java.lang.Thread.run(Thread.java:745)
{code}
{code}
Caused by: java.lang.ArrayIndexOutOfBoundsException: -2
at java.util.ArrayList.elementData(ArrayList.java:418)
at java.util.ArrayList.get(ArrayList.java:431)
at com.esotericsoftware.kryo.util.MapReferenceResolver.getReadObject(MapReferenceResolver.java:42)
at com.esotericsoftware.kryo.Kryo.readReferenceOrNull(Kryo.java:805)
at com.esotericsoftware.kryo.Kryo.readClassAndObject(Kryo.java:759)
at com.esotericsoftware.kryo.serializers.MapSerializer.read(MapSerializer.java:135)
at com.esotericsoftware.kryo.serializers.MapSerializer.read(MapSerializer.java:21)
at com.esotericsoftware.kryo.Kryo.readClassAndObject(Kryo.java:761)
at org.apache.flink.api.java.typeutils.runtime.kryo.KryoSerializer.deserialize(KryoSerializer.java:232)
at org.apache.flink.api.java.typeutils.runtime.PojoSerializer.deserialize(PojoSerializer.java:431)
at org.apache.flink.api.java.typeutils.runtime.TupleSerializer.deserialize(TupleSerializer.java:135)
at org.apache.flink.api.java.typeutils.runtime.TupleSerializer.deserialize(TupleSerializer.java:30)
at org.apache.flink.runtime.io.disk.ChannelReaderInputViewIterator.next(ChannelReaderInputViewIterator.java:100)
at org.apache.flink.runtime.operators.sort.MergeIterator$HeadStream.nextHead(MergeIterator.java:161)
at org.apache.flink.runtime.operators.sort.MergeIterator.next(MergeIterator.java:113)
at org.apache.flink.runtime.operators.util.metrics.CountingMutableObjectIterator.next(CountingMutableObjectIterator.java:45)
at org.apache.flink.runtime.util.NonReusingKeyGroupedIterator.advanceToNext(NonReusingKeyGroupedIterator.java:130)
at org.apache.flink.runtime.util.NonReusingKeyGroupedIterator.access$300(NonReusingKeyGroupedIterator.java:32)
at org.apache.flink.runtime.util.NonReusingKeyGroupedIterator$ValuesIterator.next(NonReusingKeyGroupedIterator.java:192)
at org.okkam.entitons.mapping.flink.IndexMappingExecutor$TupleToEntitonJsonNode.reduce(IndexMappingExecutor.java:64)
at org.apache.flink.runtime.operators.GroupReduceDriver.run(GroupReduceDriver.java:131)
at org.apache.flink.runtime.operators.BatchTask.run(BatchTask.java:486)
at org.apache.flink.runtime.operators.BatchTask.invoke(BatchTask.java:351)
at org.apache.flink.runtime.taskmanager.Task.run(Task.java:584)
at java.lang.Thread.run(Thread.java:745)
{code}
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