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Posted to commits@hudi.apache.org by GitBox <gi...@apache.org> on 2020/08/20 18:20:20 UTC
[GitHub] [hudi] kpurella opened a new issue #2001: NPE While writing data to same partition on S3
kpurella opened a new issue #2001:
URL: https://github.com/apache/hudi/issues/2001
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**Describe the problem you faced**
java.lang.NullPointerException While Writing data to the same hudi partition again and again.
**To Reproduce**
Steps to reproduce the behavior:
in my case, I am reading data from Kafka and trying to write to HUDI with custom code( Not using Deltastreamer here). my job batch duration is 10 sec and my S3 partition is hourly so for every 10 sec my job try to write the data to same hour hudi partition, during this time HUDI is throwing NULL pointer Exception
**Expected behavior**
Hudi should commit the data without any Exceptions.
**Environment Description**
* Hudi version : 0.5.2-incubating
* Spark version : 2.4.5
* Hive version : 2.3.6
* Hadoop version : 2.8.5
* Storage (HDFS/S3/GCS..) : s3
* Running on Docker? (yes/no) : no
* EMR : 5.30.1
Code snippet
datFrame.write()
.format("org.apache.hudi")
.mode(SaveMode.Append)
.option(DataSourceWriteOptions.RECORDKEY_FIELD_OPT_KEY(), recordKey)
.option(DataSourceWriteOptions.PRECOMBINE_FIELD_OPT_KEY(), partitionKey)
.option(DataSourceWriteOptions.OPERATION_OPT_KEY(), operation)
.option(HoodieWriteConfig.TABLE_NAME, tableName)
.option(DataSourceWriteOptions.TABLE_TYPE_OPT_KEY(), tableType)
.option(DataSourceWriteOptions.HIVE_SYNC_ENABLED_OPT_KEY(), hiveSyncEnabled)
.option(DataSourceWriteOptions.KEYGENERATOR_CLASS_OPT_KEY(), keyGeneratorClass)
.option("hoodie.parquet.compression.codec", compressionCodec)
.option("hoodie.consistency.check.enabled", consistencyCheckEnabled)
.option("hoodie.compact.inline.max.delta.commits", inlineMaxDeltaCommits)
.option("hoodie.compact.inline", compactInlines)
.option("hoodie.insert.shuffle.parallelism", parallelism)
.option("hoodie.upsert.shuffle.parallelism", parallelism)
.option(DataSourceWriteOptions.HIVE_DATABASE_OPT_KEY(), hiveDBName)
.option(DataSourceWriteOptions.HIVE_TABLE_OPT_KEY(), hiveTableName)
.option(DataSourceWriteOptions.HIVE_PARTITION_FIELDS_OPT_KEY(), hivePartitions)
.option(DataSourceWriteOptions.HIVE_URL_OPT_KEY(), hiveUrl)
.save(HUDI_BASE_PATH_PROP);
**Stacktrace**
INFO DAGScheduler: ResultStage 9 (collect at HoodieBloomIndex.java:205) failed in 1.452 s due to Job aborted due to stage failure: Task 0 in stage 9.0 failed 4 times, most recent failure: Lost task 0.3 in stage 9.0 (TID 10, ip-10-223-69-15.emr.awsw.cld.ds.dtveng.net, executor 1): java.lang.NullPointerException
at java.util.ArrayList.addAll(ArrayList.java:583)
at org.apache.hudi.common.table.view.HoodieTableFileSystemView.fetchAllStoredFileGroups(HoodieTableFileSystemView.java:170)
at org.apache.hudi.common.table.view.AbstractTableFileSystemView.getLatestBaseFilesBeforeOrOn(AbstractTableFileSystemView.java:355)
at org.apache.hudi.index.bloom.HoodieBloomIndex.lambda$loadInvolvedFiles$19c2c1bb$1(HoodieBloomIndex.java:201)
at org.apache.spark.api.java.JavaRDDLike$$anonfun$fn$1$1.apply(JavaRDDLike.scala:125)
at org.apache.spark.api.java.JavaRDDLike$$anonfun$fn$1$1.apply(JavaRDDLike.scala:125)
at scala.collection.Iterator$$anon$12.nextCur(Iterator.scala:435)
at scala.collection.Iterator$$anon$12.hasNext(Iterator.scala:441)
at scala.collection.Iterator$class.foreach(Iterator.scala:891)
at scala.collection.AbstractIterator.foreach(Iterator.scala:1334)
at scala.collection.generic.Growable$class.$plus$plus$eq(Growable.scala:59)
at scala.collection.mutable.ArrayBuffer.$plus$plus$eq(ArrayBuffer.scala:104)
at scala.collection.mutable.ArrayBuffer.$plus$plus$eq(ArrayBuffer.scala:48)
at scala.collection.TraversableOnce$class.to(TraversableOnce.scala:310)
at scala.collection.AbstractIterator.to(Iterator.scala:1334)
at scala.collection.TraversableOnce$class.toBuffer(TraversableOnce.scala:302)
at scala.collection.AbstractIterator.toBuffer(Iterator.scala:1334)
at scala.collection.TraversableOnce$class.toArray(TraversableOnce.scala:289)
at scala.collection.AbstractIterator.toArray(Iterator.scala:1334)
at org.apache.spark.rdd.RDD$$anonfun$collect$1$$anonfun$15.apply(RDD.scala:990)
at org.apache.spark.rdd.RDD$$anonfun$collect$1$$anonfun$15.apply(RDD.scala:990)
at org.apache.spark.SparkContext$$anonfun$runJob$5.apply(SparkContext.scala:2101)
at org.apache.spark.SparkContext$$anonfun$runJob$5.apply(SparkContext.scala:2101)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
at org.apache.spark.scheduler.Task.run(Task.scala:123)
at org.apache.spark.executor.Executor$TaskRunner$$anonfun$10.apply(Executor.scala:408)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1405)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:414)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Driver stacktrace:
20/08/20 12:37:51 INFO DAGScheduler: Job 4 failed: collect at HoodieBloomIndex.java:205, took 1.455517 s
Exception in thread "main" org.apache.hudi.exception.HoodieUpsertException: Failed to upsert for commit time 20200820123744
at org.apache.hudi.client.HoodieWriteClient.upsert(HoodieWriteClient.java:192)
at org.apache.hudi.DataSourceUtils.doWriteOperation(DataSourceUtils.java:208)
at org.apache.hudi.HoodieSparkSqlWriter$.write(HoodieSparkSqlWriter.scala:147)
at org.apache.hudi.DefaultSource.createRelation(DefaultSource.scala:108)
at org.apache.spark.sql.execution.datasources.SaveIntoDataSourceCommand.run(SaveIntoDataSourceCommand.scala:45)
at org.apache.spark.sql.execution.command.ExecutedCommandExec.sideEffectResult$lzycompute(commands.scala:70)
at org.apache.spark.sql.execution.command.ExecutedCommandExec.sideEffectResult(commands.scala:68)
at org.apache.spark.sql.execution.command.ExecutedCommandExec.doExecute(commands.scala:86)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$execute$1.apply(SparkPlan.scala:173)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$execute$1.apply(SparkPlan.scala:169)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$executeQuery$1.apply(SparkPlan.scala:197)
at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:151)
at org.apache.spark.sql.execution.SparkPlan.executeQuery(SparkPlan.scala:194)
at org.apache.spark.sql.execution.SparkPlan.execute(SparkPlan.scala:169)
at org.apache.spark.sql.execution.QueryExecution.toRdd$lzycompute(QueryExecution.scala:114)
at org.apache.spark.sql.execution.QueryExecution.toRdd(QueryExecution.scala:112)
at org.apache.spark.sql.DataFrameWriter$$anonfun$runCommand$1.apply(DataFrameWriter.scala:676)
at org.apache.spark.sql.DataFrameWriter$$anonfun$runCommand$1.apply(DataFrameWriter.scala:676)
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[GitHub] [hudi] kpurella commented on issue #2001: NPE While writing data to same partition on S3
Posted by GitBox <gi...@apache.org>.
kpurella commented on issue #2001:
URL: https://github.com/apache/hudi/issues/2001#issuecomment-680144616
Resolved after addressing partitionpath issue.
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[GitHub] [hudi] kpurella commented on issue #2001: NPE While writing data to same partition on S3
Posted by GitBox <gi...@apache.org>.
kpurella commented on issue #2001:
URL: https://github.com/apache/hudi/issues/2001#issuecomment-680144291
@bvaradar Thank you for your response. I was able to resolve this issue.
I am building invalid partitionpath which is causing the issue. - Thank you.
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[GitHub] [hudi] bvaradar commented on issue #2001: NPE While writing data to same partition on S3
Posted by GitBox <gi...@apache.org>.
bvaradar commented on issue #2001:
URL: https://github.com/apache/hudi/issues/2001#issuecomment-679264433
Can you turn on INFO level logs and attach the logs to debug this ?
Thanks,
Balaji.V
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[GitHub] [hudi] kpurella closed issue #2001: NPE While writing data to same partition on S3
Posted by GitBox <gi...@apache.org>.
kpurella closed issue #2001:
URL: https://github.com/apache/hudi/issues/2001
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